Guide to the Human Genome
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Name: ZIK1 Sequence: fasta or formatted (487aa) NCBI GI: 77736604
Description:

zinc finger protein interacting with K protein 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         22           4
 C cysteine            6.2         30           2
 D aspartate           3.1         15           1
 E glutamate           6.2         30           2
 F phenylalanine       3.3         16           2
 G glycine             8.2         40           2
 H histidine           6.6         32           2
 I isoleucine          3.1         15           1
 K lysine              8.4         41           2
 L leucine             7.0         34           2
 M methionine          1.4          7           1
 N asparagine          2.3         11           1
 P proline             4.1         20           1
 Q glutamine           6.6         32           1
 R arginine            5.7         28           2
 S serine              9.2         45           2
 T threonine           5.3         26           1
 V valine              4.9         24           2
 W tryptophan          0.6          3           1
 Y tyrosine            3.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein interacting with K protein 1 [Ho... 
ZNF416                0.585   zinc finger protein 416 
ZNF211                0.515   zinc finger protein 211 isoform 1 
ZNF211                0.504   zinc finger protein 211 isoform 2 
ZNF530                0.480   zinc finger protein 530 
ZNF419                0.469   zinc finger protein 419 isoform 5 
ZNF418                0.468   zinc finger protein 418 
ZNF551                0.467   zinc finger protein 551 
ZNF419                0.462   zinc finger protein 419 isoform 6 
ZNF419                0.462   zinc finger protein 419 isoform 7 
ZNF419                0.457   zinc finger protein 419 isoform 2 
ZNF17                 0.455   zinc finger protein 17 
ZNF776                0.454   zinc finger protein 776 
ZNF256                0.453   zinc finger protein 256 
ZNF419                0.452   zinc finger protein 419 isoform 1 
ZNF772                0.450   zinc finger protein 772 isoform 2 
ZNF548                0.448   zinc finger protein 548 
ZNF419                0.446   zinc finger protein 419 isoform 3 
ZNF419                0.445   zinc finger protein 419 isoform 4 
ZNF792                0.439   zinc finger protein 792 
ZNF417                0.437   zinc finger protein 417 
ZNF587                0.431   zinc finger protein 587 
ZNF772                0.430   zinc finger protein 772 isoform 1 
ZNF304                0.430   zinc finger protein 304 
ZNF132                0.427   zinc finger protein 132 
ZNF814                0.423   zinc finger protein 814 
LOC100293516          0.423   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.420   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.420   PREDICTED: hypothetical protein XP_002343703 
ZNF773                0.416   zinc finger protein 773 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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