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Search of human proteins with 38016930
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38016930 2'-5'-oligoadenylate synthetase-like isoform b
[Homo sapiens]
(255 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38016930 2'-5'-oligoadenylate synthetase-like isoform b [Homo... 525 e-149
gi|11321577 2'-5'-oligoadenylate synthetase-like isoform a [Homo... 446 e-126
gi|45007007 2'-5'oligoadenylate synthetase 3 [Homo sapiens] 147 1e-35
gi|74229015 2',5'-oligoadenylate synthetase 1 isoform 3 [Homo sa... 131 5e-31
gi|74229013 2',5'-oligoadenylate synthetase 1 isoform 1 [Homo sa... 131 5e-31
gi|74229011 2',5'-oligoadenylate synthetase 1 isoform 2 [Homo sa... 131 5e-31
gi|74229017 2'-5'-oligoadenylate synthetase 2 isoform 2 [Homo sa... 123 1e-28
gi|74229019 2'-5'-oligoadenylate synthetase 2 isoform 1 [Homo sa... 123 1e-28
gi|74229021 2'-5'-oligoadenylate synthetase 2 isoform 3 [Homo sa... 48 7e-06
gi|239753089 PREDICTED: hypothetical protein [Homo sapiens] 33 0.18
gi|171906567 peripheral benzodiazepine receptor-associated prote... 32 0.54
gi|171906559 peripheral benzodiazepine receptor-associated prote... 32 0.54
gi|5454180 zinc finger protein 193 [Homo sapiens] 31 0.92
gi|5902090 solute carrier family 2 (facilitated glucose transpor... 30 2.0
gi|4507271 serine/threonine protein kinase 11 [Homo sapiens] 30 2.0
gi|17738285 zinc finger with KRAB and SCAN domains 4 [Homo sapiens] 30 2.7
gi|161353481 zinc finger protein 187 isoform a [Homo sapiens] 30 2.7
gi|161353483 zinc finger protein 187 isoform b [Homo sapiens] 30 2.7
gi|171906553 zinc finger with KRAB and SCAN domains 3 [Homo sapi... 29 3.5
gi|56699475 zinc finger protein 202 [Homo sapiens] 28 5.9
gi|24308265 methyltransferase like 14 [Homo sapiens] 28 5.9
gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens] 28 7.8
gi|4505911 postmeiotic segregation 1 isoform a [Homo sapiens] 28 7.8
gi|23592238 glucose transporter 14 [Homo sapiens] 28 7.8
gi|62988361 absent in melanoma 1 [Homo sapiens] 28 7.8
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 28 7.8
>gi|38016930 2'-5'-oligoadenylate synthetase-like isoform b [Homo
sapiens]
Length = 255
Score = 525 bits (1351), Expect = e-149
Identities = 255/255 (100%), Positives = 255/255 (100%)
Query: 1 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR 60
MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
Sbjct: 1 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR 60
Query: 61 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD 120
VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
Sbjct: 61 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD 120
Query: 121 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA 180
LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
Sbjct: 121 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA 180
Query: 181 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQAHHPGSGRPHPQRGRRVQMGH 240
CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQAHHPGSGRPHPQRGRRVQMGH
Sbjct: 181 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQAHHPGSGRPHPQRGRRVQMGH 240
Query: 241 RCSEGLPVPETGLLL 255
RCSEGLPVPETGLLL
Sbjct: 241 RCSEGLPVPETGLLL 255
>gi|11321577 2'-5'-oligoadenylate synthetase-like isoform a [Homo
sapiens]
Length = 514
Score = 446 bits (1148), Expect = e-126
Identities = 219/219 (100%), Positives = 219/219 (100%)
Query: 1 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR 60
MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
Sbjct: 1 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR 60
Query: 61 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD 120
VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
Sbjct: 61 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD 120
Query: 121 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA 180
LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
Sbjct: 121 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA 180
Query: 181 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ 219
CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ
Sbjct: 181 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ 219
>gi|45007007 2'-5'oligoadenylate synthetase 3 [Homo sapiens]
Length = 1087
Score = 147 bits (370), Expect = 1e-35
Identities = 87/232 (37%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 7 LYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVVK 66
LY TPA LD F++++LQP+R++ +V AV T+ FL++ F+ + ++V+KVVK
Sbjct: 747 LYQTPAGDLDKFISEFLQPNRQFLAQVNKAVDTICSFLKENCFR-----NSPIKVIKVVK 801
Query: 67 VGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTM--WQSQDLLDLGLE 124
GS GT LR + +LV FLSCF F E +++ I + Q + ++ E
Sbjct: 802 GGSSAKGTALRGRSDADLVVFLSCFSQFTEQGNKRAEIISEIRAQLEACQQERQFEVKFE 861
Query: 125 DLRMEQRVPDALVFTIQTRGTAEP-ITVTIVPAYRALGPSLPNSQPPPEVYVSLIKACGG 183
+ E P L F++ ++ + + ++PA+ ALG + S+P +VYV LI +
Sbjct: 862 VSKWEN--PRVLSFSLTSQTMLDQSVDFDVLPAFDALGQLVSGSRPSSQVYVDLIHSYSN 919
Query: 184 PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQAHHPGSGRPH--PQRG 233
G + F+ELQR+F+ RPTKLKSL+RLVKHWYQQ GR PQ G
Sbjct: 920 AGEYSTCFTELQRDFIISRPTKLKSLIRLVKHWYQQCTKISKGRGSLPPQHG 971
Score = 135 bits (339), Expect = 5e-32
Identities = 86/217 (39%), Positives = 122/217 (56%), Gaps = 9/217 (4%)
Query: 6 ELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVV 65
+LYSTPA+ LD FVA+ LQP +E+ E+ A+ + LR+ +G R RVLK V
Sbjct: 2 DLYSTPAAALDRFVARRLQPRKEFVEKARRALGALAAALRE---RGGRLGAAAPRVLKTV 58
Query: 66 KVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVL---RLIWKTMWQSQDLLDLG 122
K GS G GT L+ + ELV FL CF S+ + ++L R ++ WQ+ G
Sbjct: 59 KGGSSGRGTALKGGCDSELVIFLDCFKSYVDQRARRAEILSEMRASLESWWQNPVP---G 115
Query: 123 LEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKACG 182
L EQ VP AL F + + + + V++VPA+ LG + +P P+VY +L+ +
Sbjct: 116 LRLTFPEQSVPGALQFRLTSVDLEDWMDVSLVPAFNVLGQAGSGVKPKPQVYSTLLNSGC 175
Query: 183 GPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ 219
G F+EL+RNFV RP KLK+L+ LVKHWY Q
Sbjct: 176 QGGEHAACFTELRRNFVNIRPAKLKNLILLVKHWYHQ 212
Score = 116 bits (291), Expect = 2e-26
Identities = 75/226 (33%), Positives = 119/226 (52%), Gaps = 17/226 (7%)
Query: 6 ELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVV 65
+L P LD F+ L+P +++E+V A+ + L + + +V
Sbjct: 407 DLSQIPTKELDRFIQDHLKPSPQFQEQVKKAIDIILRCLHENCVH---------KASRVS 457
Query: 66 KVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVL---RLIWKTMWQSQDLLDLG 122
K GSFG GT LR +VEL+ FL+CF +++ ++L R ++ WQ Q + L
Sbjct: 458 KGGSFGRGTDLRDGCDVELIIFLNCFTDYKDQGPRRAEILDEMRAQLESWWQDQ-VPSLS 516
Query: 123 LEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKACG 182
L+ EQ VP+AL F + + V+++PA+ A+G ++P P+VY L+ +
Sbjct: 517 LQF--PEQNVPEALQFQLVSTALKSWTDVSLLPAFDAVGQLSSGTKPNPQVYSRLLTSGC 574
Query: 183 GPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ--AHHPGSG 226
G F+EL+RNF+ RP KLK+L+ LVKHWY+Q A + G G
Sbjct: 575 QEGEHKACFAELRRNFMNIRPVKLKNLILLVKHWYRQVAAQNKGKG 620
>gi|74229015 2',5'-oligoadenylate synthetase 1 isoform 3 [Homo
sapiens]
Length = 414
Score = 131 bits (330), Expect = 5e-31
Identities = 81/220 (36%), Positives = 118/220 (53%), Gaps = 8/220 (3%)
Query: 4 MQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLK 63
M +L +TPA LD F+ +L P ++ ++ A+ + FL++ F RG V V K
Sbjct: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVCVSK 57
Query: 64 VVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTM--WQSQDLLDL 121
VVK GS G GT LR + +LV FLS +FQ+ + ++ I + + Q + +
Sbjct: 58 VVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSV 117
Query: 122 GLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKAC 181
E P AL F + + E + ++PA+ ALG +P P++YV LI+ C
Sbjct: 118 KFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEEC 177
Query: 182 GG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQ 218
G F F+ELQR+F+K RPTKLKSL+RLVKHWYQ
Sbjct: 178 TDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQ 217
>gi|74229013 2',5'-oligoadenylate synthetase 1 isoform 1 [Homo
sapiens]
Length = 400
Score = 131 bits (330), Expect = 5e-31
Identities = 81/220 (36%), Positives = 118/220 (53%), Gaps = 8/220 (3%)
Query: 4 MQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLK 63
M +L +TPA LD F+ +L P ++ ++ A+ + FL++ F RG V V K
Sbjct: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVCVSK 57
Query: 64 VVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTM--WQSQDLLDL 121
VVK GS G GT LR + +LV FLS +FQ+ + ++ I + + Q + +
Sbjct: 58 VVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSV 117
Query: 122 GLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKAC 181
E P AL F + + E + ++PA+ ALG +P P++YV LI+ C
Sbjct: 118 KFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEEC 177
Query: 182 GG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQ 218
G F F+ELQR+F+K RPTKLKSL+RLVKHWYQ
Sbjct: 178 TDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQ 217
>gi|74229011 2',5'-oligoadenylate synthetase 1 isoform 2 [Homo
sapiens]
Length = 364
Score = 131 bits (330), Expect = 5e-31
Identities = 81/220 (36%), Positives = 118/220 (53%), Gaps = 8/220 (3%)
Query: 4 MQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLK 63
M +L +TPA LD F+ +L P ++ ++ A+ + FL++ F RG V V K
Sbjct: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVCVSK 57
Query: 64 VVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTM--WQSQDLLDL 121
VVK GS G GT LR + +LV FLS +FQ+ + ++ I + + Q + +
Sbjct: 58 VVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSV 117
Query: 122 GLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKAC 181
E P AL F + + E + ++PA+ ALG +P P++YV LI+ C
Sbjct: 118 KFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEEC 177
Query: 182 GG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQ 218
G F F+ELQR+F+K RPTKLKSL+RLVKHWYQ
Sbjct: 178 TDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQ 217
>gi|74229017 2'-5'-oligoadenylate synthetase 2 isoform 2 [Homo
sapiens]
Length = 687
Score = 123 bits (309), Expect = 1e-28
Identities = 72/221 (32%), Positives = 123/221 (55%), Gaps = 16/221 (7%)
Query: 7 LYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVVK 66
L++TP LD F+ ++LQP++ + E++ AV + FL++ F+ Q +++V+
Sbjct: 340 LFTTPGHLLDKFIKEFLQPNKCFLEQIDSAVNIIRTFLKENCFR------QSTAKIQIVR 393
Query: 67 VGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIW---KTMW-QSQDLLDLG 122
GS GT L++ + +LV F + S+ +++ I K W + ++ L++
Sbjct: 394 GGSTAKGTALKTGSDADLVVFHNSLKSYTSQKNERHKIVKEIHEQLKAFWREKEEELEVS 453
Query: 123 LEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLI---K 179
E + + P L F+++++ E ++ ++PA+ ALG S P PEVY LI K
Sbjct: 454 FEPPKW--KAPRVLSFSLKSKVLNESVSFDVLPAFNALGQLSSGSTPSPEVYAGLIDLYK 511
Query: 180 ACGGPGN-FCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ 219
+ PG F F+ LQRNF++ RPTKLK L+RLVKHWY++
Sbjct: 512 SSDLPGGEFSTCFTVLQRNFIRSRPTKLKDLIRLVKHWYKE 552
Score = 90.1 bits (222), Expect = 2e-18
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 25/221 (11%)
Query: 6 ELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVV 65
+L S PA +L F+ ++L+P+ E + + + V T+ + L++ +Q V V
Sbjct: 7 QLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP--------EQFPLVQGVA 58
Query: 66 KVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGL-- 123
GS+G TVLR + LV F S FQ+ + +D+L ++ D L L
Sbjct: 59 IGGSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILD-------KTGDKLKFCLFT 111
Query: 124 EDLRMEQRVPDALV-FTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYV----SLI 178
+ L+ + +L FTIQ + I+ ++ A+ AL N P P +Y SL
Sbjct: 112 KWLKNNFEIQKSLDGFTIQVFTKNQRISFEVLAAFNALSL---NDNPSPWIYRELKRSLD 168
Query: 179 KACGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ 219
K PG F F+ELQ+ F +RP KLK L+ L+KHW+QQ
Sbjct: 169 KTNASPGEFAVCFTELQQKFFDNRPGKLKDLILLIKHWHQQ 209
>gi|74229019 2'-5'-oligoadenylate synthetase 2 isoform 1 [Homo
sapiens]
Length = 719
Score = 123 bits (309), Expect = 1e-28
Identities = 72/221 (32%), Positives = 123/221 (55%), Gaps = 16/221 (7%)
Query: 7 LYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVVK 66
L++TP LD F+ ++LQP++ + E++ AV + FL++ F+ Q +++V+
Sbjct: 340 LFTTPGHLLDKFIKEFLQPNKCFLEQIDSAVNIIRTFLKENCFR------QSTAKIQIVR 393
Query: 67 VGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIW---KTMW-QSQDLLDLG 122
GS GT L++ + +LV F + S+ +++ I K W + ++ L++
Sbjct: 394 GGSTAKGTALKTGSDADLVVFHNSLKSYTSQKNERHKIVKEIHEQLKAFWREKEEELEVS 453
Query: 123 LEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLI---K 179
E + + P L F+++++ E ++ ++PA+ ALG S P PEVY LI K
Sbjct: 454 FEPPKW--KAPRVLSFSLKSKVLNESVSFDVLPAFNALGQLSSGSTPSPEVYAGLIDLYK 511
Query: 180 ACGGPGN-FCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ 219
+ PG F F+ LQRNF++ RPTKLK L+RLVKHWY++
Sbjct: 512 SSDLPGGEFSTCFTVLQRNFIRSRPTKLKDLIRLVKHWYKE 552
Score = 90.1 bits (222), Expect = 2e-18
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 25/221 (11%)
Query: 6 ELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVV 65
+L S PA +L F+ ++L+P+ E + + + V T+ + L++ +Q V V
Sbjct: 7 QLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP--------EQFPLVQGVA 58
Query: 66 KVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGL-- 123
GS+G TVLR + LV F S FQ+ + +D+L ++ D L L
Sbjct: 59 IGGSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILD-------KTGDKLKFCLFT 111
Query: 124 EDLRMEQRVPDALV-FTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYV----SLI 178
+ L+ + +L FTIQ + I+ ++ A+ AL N P P +Y SL
Sbjct: 112 KWLKNNFEIQKSLDGFTIQVFTKNQRISFEVLAAFNALSL---NDNPSPWIYRELKRSLD 168
Query: 179 KACGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ 219
K PG F F+ELQ+ F +RP KLK L+ L+KHW+QQ
Sbjct: 169 KTNASPGEFAVCFTELQQKFFDNRPGKLKDLILLIKHWHQQ 209
>gi|74229021 2'-5'-oligoadenylate synthetase 2 isoform 3 [Homo
sapiens]
Length = 172
Score = 48.1 bits (113), Expect = 7e-06
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 6 ELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVV 65
+L S PA +L F+ ++L+P+ E + + + V T+ + L++ +Q V V
Sbjct: 7 QLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP--------EQFPLVQGVA 58
Query: 66 KVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVL 105
GS+G TVLR + LV F S FQ+ + +D+L
Sbjct: 59 IGGSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDIL 98
>gi|239753089 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 33.5 bits (75), Expect = 0.18
Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 159 ALGPSLPNSQPPPEVYV-----SLIKACGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLV 213
A GP+ + PP+ S + PG CP+ RN + PT KS+ +V
Sbjct: 22 AHGPARTRASSPPQEGAERATRSRPRVIRVPG--CPASPGYLRNSQQPSPTTFKSVFVVV 79
Query: 214 KHWYQQAHHPGSGRPHPQRGRRVQMGHRCSEGL-PVP 249
H PHPQ+GRR RC+ GL P P
Sbjct: 80 ------TVHTEKLAPHPQKGRRC-CHRRCARGLRPAP 109
>gi|171906567 peripheral benzodiazepine receptor-associated protein 1
isoform b [Homo sapiens]
Length = 1797
Score = 32.0 bits (71), Expect = 0.54
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 123 LEDLRMEQRVPDALVFTIQTRGTAE-----PITVTIVPAYRALGPSLPNSQPPPEVYVSL 177
L L++ Q + +V T+ G + PIT + PA S P+ P PE L
Sbjct: 983 LSQLQLLQVCREVVVRTMSPHGESADSIPAPITPALAPASLPARVSCPSPHPSPEARAPL 1042
Query: 178 IKACGGPGN 186
A GPG+
Sbjct: 1043 ASASPGPGD 1051
>gi|171906559 peripheral benzodiazepine receptor-associated protein 1
isoform a [Homo sapiens]
Length = 1857
Score = 32.0 bits (71), Expect = 0.54
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 123 LEDLRMEQRVPDALVFTIQTRGTAE-----PITVTIVPAYRALGPSLPNSQPPPEVYVSL 177
L L++ Q + +V T+ G + PIT + PA S P+ P PE L
Sbjct: 1043 LSQLQLLQVCREVVVRTMSPHGESADSIPAPITPALAPASLPARVSCPSPHPSPEARAPL 1102
Query: 178 IKACGGPGN 186
A GPG+
Sbjct: 1103 ASASPGPGD 1111
>gi|5454180 zinc finger protein 193 [Homo sapiens]
Length = 394
Score = 31.2 bits (69), Expect = 0.92
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 13 SRLDSFVAQWLQPHREWKEEVLDAVRTVEEFL 44
+RL QWL+PH KE++LD + +E+FL
Sbjct: 71 TRLQELCYQWLRPHVSTKEQILDLL-VLEQFL 101
>gi|5902090 solute carrier family 2 (facilitated glucose
transporter), member 3 [Homo sapiens]
Length = 496
Score = 30.0 bits (66), Expect = 2.0
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 102 KDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIV 154
K +L+ +W T SQD+ ++ E RM Q ++ + +PI ++IV
Sbjct: 223 KQILQRLWGTQDVSQDIQEMKDESARMSQEKQVTVLELFRVSSYRQPIIISIV 275
>gi|4507271 serine/threonine protein kinase 11 [Homo sapiens]
Length = 433
Score = 30.0 bits (66), Expect = 2.0
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 184 PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQAHHPGSGRPHP 230
PG+ P S+L + +++ P K S+ ++ +H + + HP + P P
Sbjct: 275 PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVP 321
>gi|17738285 zinc finger with KRAB and SCAN domains 4 [Homo sapiens]
Length = 545
Score = 29.6 bits (65), Expect = 2.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 13 SRLDSFVAQWLQPHREWKEEVLDAVRTVEEFL 44
SRL QWLQP KE++L+ + +E+FL
Sbjct: 72 SRLRELCGQWLQPEMHSKEQILELL-VLEQFL 102
>gi|161353481 zinc finger protein 187 isoform a [Homo sapiens]
Length = 479
Score = 29.6 bits (65), Expect = 2.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 13 SRLDSFVAQWLQPHREWKEEVLDAVRTVEEFL 44
SRL QWLQP KE++L+ + +E+FL
Sbjct: 70 SRLRELCQQWLQPETHTKEQILELL-VLEQFL 100
>gi|161353483 zinc finger protein 187 isoform b [Homo sapiens]
Length = 478
Score = 29.6 bits (65), Expect = 2.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 13 SRLDSFVAQWLQPHREWKEEVLDAVRTVEEFL 44
SRL QWLQP KE++L+ + +E+FL
Sbjct: 70 SRLRELCQQWLQPETHTKEQILELL-VLEQFL 100
>gi|171906553 zinc finger with KRAB and SCAN domains 3 [Homo
sapiens]
Length = 538
Score = 29.3 bits (64), Expect = 3.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 13 SRLDSFVAQWLQPHREWKEEVLDAVRTVEEFL 44
SRL QWLQP KE++L+ + +E+FL
Sbjct: 65 SRLRELCRQWLQPEMHSKEQILELL-VLEQFL 95
>gi|56699475 zinc finger protein 202 [Homo sapiens]
Length = 648
Score = 28.5 bits (62), Expect = 5.9
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 14 RLDSFVAQWLQPHREWKEEVLDAVRTVEEFL 44
RL QWL+P R KE++L+ + +E+FL
Sbjct: 66 RLRELCHQWLRPERRTKEQILELL-VLEQFL 95
>gi|24308265 methyltransferase like 14 [Homo sapiens]
Length = 456
Score = 28.5 bits (62), Expect = 5.9
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 152 TIVPAYRALGPSLPNSQPPPEVYVSLIKACGGPGNFCPSFSELQRNFVKHRPTKLKS 208
TI P + +GP+L NS E Y S A C E++R K P K KS
Sbjct: 352 TIRPGWLTVGPTLTNSNYNAETYASYFSAPNSYLTGCT--EEIERLRPKSPPPKSKS 406
>gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens]
Length = 770
Score = 28.1 bits (61), Expect = 7.8
Identities = 55/216 (25%), Positives = 82/216 (37%), Gaps = 44/216 (20%)
Query: 32 EVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCF 91
EVL RT + +F + LD +L K G GT + + R L L
Sbjct: 105 EVLITTRTAAD-----NFSTQYVLDGSGHILSQ-KPSHLGQGTTVTALR---LFKNLPVR 155
Query: 92 HSFQEAAKHHKDVLRLIWKTMWQSQDLL-DLGL--EDLRM-----------EQRVPDALV 137
F AK KD ++ I QDLL G+ DLR+ + RV D +
Sbjct: 156 KQFYSTAKKCKDEIKKI-------QDLLMSFGILKPDLRIVFVHNKAVIWQKSRVSDHKM 208
Query: 138 FTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVS-LIKACGGPGNFCPSFSELQR 196
+ GTA + S ++Y+S + C +F S S +R
Sbjct: 209 ALMSVLGTAVMNNME----------SFQYHSEESQIYLSGFLPKCDADHSFT-SLSTPER 257
Query: 197 NFV--KHRPTKLKSLLRLVKHWYQQAHHPGSGRPHP 230
+F+ RP K +L+L++H Y S R +P
Sbjct: 258 SFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYP 293
>gi|4505911 postmeiotic segregation 1 isoform a [Homo sapiens]
Length = 932
Score = 28.1 bits (61), Expect = 7.8
Identities = 55/216 (25%), Positives = 82/216 (37%), Gaps = 44/216 (20%)
Query: 32 EVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCF 91
EVL RT + +F + LD +L K G GT + + R L L
Sbjct: 105 EVLITTRTAAD-----NFSTQYVLDGSGHILSQ-KPSHLGQGTTVTALR---LFKNLPVR 155
Query: 92 HSFQEAAKHHKDVLRLIWKTMWQSQDLL-DLGL--EDLRM-----------EQRVPDALV 137
F AK KD ++ I QDLL G+ DLR+ + RV D +
Sbjct: 156 KQFYSTAKKCKDEIKKI-------QDLLMSFGILKPDLRIVFVHNKAVIWQKSRVSDHKM 208
Query: 138 FTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVS-LIKACGGPGNFCPSFSELQR 196
+ GTA + S ++Y+S + C +F S S +R
Sbjct: 209 ALMSVLGTAVMNNME----------SFQYHSEESQIYLSGFLPKCDADHSFT-SLSTPER 257
Query: 197 NFV--KHRPTKLKSLLRLVKHWYQQAHHPGSGRPHP 230
+F+ RP K +L+L++H Y S R +P
Sbjct: 258 SFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYP 293
>gi|23592238 glucose transporter 14 [Homo sapiens]
Length = 520
Score = 28.1 bits (61), Expect = 7.8
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 104 VLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIV 154
+L+ +W T SQD+ ++ E RM Q ++ + +PI ++IV
Sbjct: 249 ILQRLWGTQDVSQDIQEMKDESARMSQEKQVTVLELFRVSSYRQPIIISIV 299
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 28.1 bits (61), Expect = 7.8
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 154 VPAYRALGPSLPNSQPPPEVYVSLIKACGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLV 213
VPA A GP P + PP+ G S E R + P K SLL +
Sbjct: 117 VPAPPASGPRAPAKESPPKRVPDPSPVT--KGTAAESGEEAARAIPRELPVKSSSLLPEI 174
Query: 214 KHWYQQAHHPGSGRPHPQRGRRVQMG 239
K +++ P + GR ++G
Sbjct: 175 KPEHKRGPLPNHFNGRAEGGRSRELG 200
>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
Length = 337
Score = 28.1 bits (61), Expect = 7.8
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 164 LPNSQPPPEVYVSLIK-ACGGPGNFCPSFSELQRNFVK 200
+P++ PP YV+L +C G FCP+ +E +R+ K
Sbjct: 129 VPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEARRSAAK 166
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,445,670
Number of Sequences: 37866
Number of extensions: 556761
Number of successful extensions: 1672
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1626
Number of HSP's gapped (non-prelim): 32
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.