Guide to the Human Genome
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Name: ZNF835 Sequence: fasta or formatted (559aa) NCBI GI: 54291710
Description:

zinc finger protein 835

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         48           2
 C cysteine            6.6         37           1
 D aspartate           2.5         14           2
 E glutamate           7.3         41           2
 F phenylalanine       3.6         20           1
 G glycine             8.4         47           3
 H histidine           7.2         40           2
 I isoleucine          2.9         16           1
 K lysine              5.4         30           2
 L leucine             4.8         27           2
 M methionine          0.5          3           1
 N asparagine          1.3          7           1
 P proline             6.3         35           1
 Q glutamine           6.4         36           2
 R arginine            8.2         46           2
 S serine              8.9         50           3
 T threonine           5.9         33           1
 V valine              2.1         12           1
 W tryptophan          0.5          3           1
 Y tyrosine            2.5         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 835 
ZNF135                0.450   zinc finger protein 135 
LOC647678             0.442   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.442   PREDICTED: hypothetical protein XP_002343697 
LOC647678             0.439   PREDICTED: similar to zinc finger protein 347 [Homo...
ZNF184                0.439   zinc finger protein 184 
ZNF470                0.433   zinc finger protein 470 
ZNF420                0.432   zinc finger protein 420 
ZNF665                0.429   zinc finger protein 665 
ZNF345                0.427   zinc finger protein 345 
LOC100287429          0.425   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.425   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.425   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.425   zinc finger protein 84 
ZNF84                 0.425   zinc finger protein 84 
ZSCAN2                0.424   zinc finger protein 29 isoform 1 
ZNF502                0.422   zinc finger protein 502 
ZNF502                0.422   zinc finger protein 502 
ZNF502                0.422   zinc finger protein 502 
ZNF502                0.422   zinc finger protein 502 
ZNF16                 0.421   zinc finger protein 16 
ZFP28                 0.421   zinc finger protein 28 
ZNF16                 0.421   zinc finger protein 16 
ZNF347                0.419   zinc finger protein 347 
ZNF160                0.417   zinc finger protein 160 
ZNF160                0.417   zinc finger protein 160 
ZNF160                0.417   zinc finger protein 160 
ZNF568                0.416   zinc finger protein 568 
ZNF471                0.416   zinc finger protein 471 
ZNF569                0.415   zinc finger protein 569 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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