Guide to the Human Genome
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Search of human proteins with 37594469

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
         (338 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [...   672   0.0  
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [...   670   0.0  
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas...    96   5e-20
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre...    71   2e-12
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...    70   3e-12
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ...    67   2e-11
gi|20127408 mitochondrial trifunctional protein, alpha subunit p...    64   2e-10
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo...    55   9e-08
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof...    53   4e-07
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof...    53   4e-07
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor...    49   8e-06
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo...    49   8e-06
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s...    49   8e-06
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s...    49   8e-06
gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Hom...    47   2e-05
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]        45   7e-05
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]         45   7e-05
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...    41   0.001
gi|221307494 chromodomain protein, Y chromosome-like isoform a [...    40   0.003
gi|221136756 chromodomain protein, Y chromosome-like isoform d [...    40   0.003
gi|221136753 chromodomain protein, Y chromosome-like isoform d [...    40   0.003
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof...    39   0.007
gi|117414154 sodium channel associated protein 2 isoform b [Homo...    36   0.043
gi|117414162 sodium channel associated protein 2 isoform a [Homo...    36   0.043
gi|29294627 PTPRF interacting protein binding protein 1 isoform ...    36   0.056
gi|111955063 GTP-binding protein 10 isoform 1 [Homo sapiens]           32   0.81 
gi|50593027 enoyl Coenzyme A hydratase domain containing 1 isofo...    31   1.4  
gi|34878904 synaptonemal complex protein 1 [Homo sapiens]              31   1.8  
gi|19923599 calmin [Homo sapiens]                                      30   3.1  
gi|66363686 NEDD8 activating enzyme E1 subunit 1 isoform b [Homo...    30   4.0  

>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
           [Homo sapiens]
          Length = 338

 Score =  672 bits (1734), Expect = 0.0
 Identities = 338/338 (100%), Positives = 338/338 (100%)

Query: 1   MGQREMWRLMSRFNAFKRTNTILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKFLNAL 60
           MGQREMWRLMSRFNAFKRTNTILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKFLNAL
Sbjct: 1   MGQREMWRLMSRFNAFKRTNTILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKFLNAL 60

Query: 61  TLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFRE 120
           TLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFRE
Sbjct: 61  TLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFRE 120

Query: 121 EYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGG 180
           EYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGG
Sbjct: 121 EYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGG 180

Query: 181 GYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENI 240
           GYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENI
Sbjct: 181 GYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENI 240

Query: 241 ASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVIN 300
           ASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVIN
Sbjct: 241 ASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVIN 300

Query: 301 KMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMF 338
           KMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMF
Sbjct: 301 KMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMF 338


>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
           [Homo sapiens]
          Length = 386

 Score =  670 bits (1728), Expect = 0.0
 Identities = 337/337 (100%), Positives = 337/337 (100%)

Query: 1   MGQREMWRLMSRFNAFKRTNTILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKFLNAL 60
           MGQREMWRLMSRFNAFKRTNTILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKFLNAL
Sbjct: 1   MGQREMWRLMSRFNAFKRTNTILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKFLNAL 60

Query: 61  TLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFRE 120
           TLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFRE
Sbjct: 61  TLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFRE 120

Query: 121 EYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGG 180
           EYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGG
Sbjct: 121 EYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGG 180

Query: 181 GYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENI 240
           GYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENI
Sbjct: 181 GYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENI 240

Query: 241 ASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVIN 300
           ASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVIN
Sbjct: 241 ASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVIN 300

Query: 301 KMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACM 337
           KMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACM
Sbjct: 301 KMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACM 337


>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
           precursor [Homo sapiens]
          Length = 290

 Score = 95.9 bits (237), Expect = 5e-20
 Identities = 76/236 (32%), Positives = 117/236 (49%), Gaps = 25/236 (10%)

Query: 36  EEVLLEKKG---CTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGK 92
           E ++ EK+G     G+I LNRPK LNAL   +I ++   LK +E+DP    I++ G G K
Sbjct: 34  EYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTG-GDK 92

Query: 93  AFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSV 152
           AF AG DI+ +      +   +  F +    L       +KP +A ++G   GGG  L++
Sbjct: 93  AFAAGADIKEMQNLS-FQDCYSSKFLKHWDHLTQV----KKPVIAAVNGYAFGGGCELAM 147

Query: 153 HGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-LGYFLALTGFRLKGRDVYRAG 211
                 A EK  FA PE  IG  P  GG   L R  GK L   + LTG R+  +D  +AG
Sbjct: 148 MCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAG 207

Query: 212 IATHFVD-----------SEKLAMLEEDLLALKSPSKENIASVLENYHTE-SKIDR 255
           + +               +EK+A   + ++A+   +KE++ +  E   TE SK+++
Sbjct: 208 LVSKICPVETLVEEAIQCAEKIASNSKIVVAM---AKESVNAAFEMTLTEGSKLEK 260


>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
           precursor [Homo sapiens]
          Length = 339

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 4/175 (2%)

Query: 48  VITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAE 107
           V+ +NR    N+L+ N+I+ +   +   + D +   III+      FCAG D++    A+
Sbjct: 91  VLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLK--ERAK 148

Query: 108 KAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAM 167
            +  ++ P   +   ++N+ + +   P +A I G+ +GGG+ L++    RVA       +
Sbjct: 149 MSSSEVGPFVSKIRAVIND-IANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGL 207

Query: 168 PETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFVDSEK 221
            ET + + P  GG   LPR  G  L   L  +   L G++    G+ +H ++  +
Sbjct: 208 VETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQ 262


>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
           dehydrogenase [Homo sapiens]
          Length = 723

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 11/174 (6%)

Query: 48  VITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAE 107
           +I L  P  +NA++  ++R I   L+K   D     I+I GA GK F AG DIR  S   
Sbjct: 13  LIRLRNPP-VNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGK-FSAGADIRGFSAPR 70

Query: 108 KAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAM 167
                +  V   +E   N      +KP VA I G+  GGG+ L++   +R+A  +    +
Sbjct: 71  TFGLTLGHVV--DEIQRN------EKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGL 122

Query: 168 PETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFVDSE 220
           PE  +GL P   G   LPRL G      L  +G R+   +  + GI    V+S+
Sbjct: 123 PEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 176


>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
           [Homo sapiens]
          Length = 328

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 19/260 (7%)

Query: 49  ITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVIS---- 104
           + LNRP   NA+     R++     K  +D +   ++I GAG K F AG D+  ++    
Sbjct: 70  VQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAG-KMFTAGIDLMDMASDIL 128

Query: 105 -----EAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVA 159
                +  +    +  +  R +   N  +  C KP +A +HG  +GGGV L      R  
Sbjct: 129 QPKGDDVARISWYLRDIITRYQETFN-VIERCPKPVIAAVHGGCIGGGVDLVTACDIRYC 187

Query: 160 TEKCLFAMPETAIGLFPDVGGGYFLPRLQG--KLGYFLALTGFRLKGRDVYRAGIATHFV 217
            +   F + E  +GL  DVG    LP++ G   L   LA T  ++   +   +G+ +  V
Sbjct: 188 AQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSR-V 246

Query: 218 DSEKLAMLEEDL-----LALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCF 272
             +K  ML+  L     ++ KSP       V   Y  +  +    +++   +M  + +  
Sbjct: 247 FPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQD 306

Query: 273 SANTVEEIIENLQQDGSSFA 292
              +V+   EN +    +F+
Sbjct: 307 LVKSVQATTENKELKTVTFS 326


>gi|20127408 mitochondrial trifunctional protein, alpha subunit
           precursor [Homo sapiens]
          Length = 763

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 11/218 (5%)

Query: 9   LMSRFNAFKRTNT---ILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKF-LNALTLNM 64
           ++SRF+AF+   +   I  +   S        +    KG   V+ +N P   +N L+  +
Sbjct: 9   ILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSKVNTLSKEL 68

Query: 65  IRQIYPQLKK-WEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM 123
             +    + + W  D     ++I    G  F AG DI +++ A K  Q++  +  +E   
Sbjct: 69  HSEFSEVMNEIWASDQIRSAVLISSKPG-CFIAGADINMLA-ACKTLQEVTQLS-QEAQR 125

Query: 124 LNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATE--KCLFAMPETAIGLFPDVGGG 181
           +   +    KP VA I+G  +GGG+ +++  Q+R+AT+  K +   PE  +G  P  GG 
Sbjct: 126 IVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGT 185

Query: 182 YFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFVD 218
             LP++ G      + LTG  ++     + G+    V+
Sbjct: 186 QRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVE 223


>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
           sapiens]
          Length = 303

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 3/174 (1%)

Query: 49  ITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEK 108
           I L+ PK  N L+L M++ +   +   + D     +II  A G  F +G D++ ++E E+
Sbjct: 59  IVLSNPKKRNTLSLAMLKSLQSDILH-DADSNDLKVIIISAEGPVFSSGHDLKELTE-EQ 116

Query: 109 AKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMP 168
            +   A VF     ++ + + +   P +A+++G+    G  L       VA++K  FA P
Sbjct: 117 GRDYHAEVFQTCSKVMMH-IRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATP 175

Query: 169 ETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKL 222
              +GLF    G      +  K+   +  TG  +  ++    G+ +  V   +L
Sbjct: 176 GVNVGLFCSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAEL 229


>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
           1 [Homo sapiens]
          Length = 301

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 9/185 (4%)

Query: 47  GVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEA 106
           G++TLN P  +NA +  M+ Q+  ++ + E   E   +I++GA    F +G D+  +   
Sbjct: 59  GILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKN-TFSSGSDLNAVKSL 117

Query: 107 EKAKQKIAPVFFREEYMLNNAVGSCQKPY--VALIHGITMGGGVGLSVHGQFRVATEKCL 164
              +  +A   F    M N      + P   VAL+ G  +GGG   +    FR+ T +  
Sbjct: 118 GTPEDGMAVCMF----MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESK 173

Query: 165 FAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTG-FRLKGRDVYRAGIATHFV-DSEKL 222
                  +G+ P  GG   L  + G       L+G  +L  ++    G+    +  S++ 
Sbjct: 174 IRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDET 233

Query: 223 AMLEE 227
             LEE
Sbjct: 234 KSLEE 238


>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
           5 [Homo sapiens]
          Length = 307

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 9/185 (4%)

Query: 47  GVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEA 106
           G++TLN P  +NA +  M+ Q+  ++ + E   E   +I++GA    F +G D+  +   
Sbjct: 65  GILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKN-TFSSGSDLNAVKSL 123

Query: 107 EKAKQKIAPVFFREEYMLNNAVGSCQKPY--VALIHGITMGGGVGLSVHGQFRVATEKCL 164
              +  +A   F    M N      + P   VAL+ G  +GGG   +    FR+ T +  
Sbjct: 124 GTPEDGMAVCMF----MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESK 179

Query: 165 FAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTG-FRLKGRDVYRAGIATHFV-DSEKL 222
                  +G+ P  GG   L  + G       L+G  +L  ++    G+    +  S++ 
Sbjct: 180 IRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDET 239

Query: 223 AMLEE 227
             LEE
Sbjct: 240 KSLEE 244


>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
           [Homo sapiens]
          Length = 554

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 5/192 (2%)

Query: 26  LRMSKHTDAAEEVLLEKK-GCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLI 84
           +R+++      +++++K+ G T ++   R    NAL   +I++I   L     D     +
Sbjct: 274 IRLTESASTYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSK--L 331

Query: 85  IIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM-LNNAVGSCQKPYVALIHGIT 143
           ++  A G  FC G D     +  +  +  A +   +      N     +KP V  ++G  
Sbjct: 332 VLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPA 391

Query: 144 MGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL-GYFLALTGFRL 202
           +G G  +        A EK  F  P T  G  PD       P++ GK     + + G +L
Sbjct: 392 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 451

Query: 203 KGRDVYRAGIAT 214
             R+    G+ +
Sbjct: 452 TAREACAKGLVS 463


>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
           a [Homo sapiens]
          Length = 540

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 5/192 (2%)

Query: 26  LRMSKHTDAAEEVLLEKK-GCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLI 84
           +R+++      +++++K+ G T ++   R    NAL   +I++I   L     D     +
Sbjct: 274 IRLTESASTYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSK--L 331

Query: 85  IIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM-LNNAVGSCQKPYVALIHGIT 143
           ++  A G  FC G D     +  +  +  A +   +      N     +KP V  ++G  
Sbjct: 332 VLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPA 391

Query: 144 MGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL-GYFLALTGFRL 202
           +G G  +        A EK  F  P T  G  PD       P++ GK     + + G +L
Sbjct: 392 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 451

Query: 203 KGRDVYRAGIAT 214
             R+    G+ +
Sbjct: 452 TAREACAKGLVS 463


>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
           sapiens]
          Length = 554

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 5/192 (2%)

Query: 26  LRMSKHTDAAEEVLLEKK-GCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLI 84
           +R+++      +++++K+ G T ++   R    NAL   +I++I   L     D     +
Sbjct: 274 IRLTESASTYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSK--L 331

Query: 85  IIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM-LNNAVGSCQKPYVALIHGIT 143
           ++  A G  FC G D     +  +  +  A +   +      N     +KP V  ++G  
Sbjct: 332 VLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPA 391

Query: 144 MGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL-GYFLALTGFRL 202
           +G G  +        A EK  F  P T  G  PD       P++ GK     + + G +L
Sbjct: 392 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 451

Query: 203 KGRDVYRAGIAT 214
             R+    G+ +
Sbjct: 452 TAREACAKGLVS 463


>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
           sapiens]
          Length = 540

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 5/192 (2%)

Query: 26  LRMSKHTDAAEEVLLEKK-GCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLI 84
           +R+++      +++++K+ G T ++   R    NAL   +I++I   L     D     +
Sbjct: 274 IRLTESASTYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSK--L 331

Query: 85  IIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM-LNNAVGSCQKPYVALIHGIT 143
           ++  A G  FC G D     +  +  +  A +   +      N     +KP V  ++G  
Sbjct: 332 VLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPA 391

Query: 144 MGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL-GYFLALTGFRL 202
           +G G  +        A EK  F  P T  G  PD       P++ GK     + + G +L
Sbjct: 392 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 451

Query: 203 KGRDVYRAGIAT 214
             R+    G+ +
Sbjct: 452 TAREACAKGLVS 463


>gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Homo
           sapiens]
          Length = 261

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 42/170 (24%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 49  ITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEK 108
           I +NRP   NAL    + ++   L +  +D +  +++ +      FCAG D++   E E+
Sbjct: 45  ILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLK---EREQ 101

Query: 109 AKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMP 168
             +    VF +    L N + S                                 +  + 
Sbjct: 102 MSEAEVGVFVQRLRGLMNDIAS-------------------------------SAVMGLI 130

Query: 169 ETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFV 217
           ET  GL P  GG   LPR  G  L   L  TG RL G + +  G+  H V
Sbjct: 131 ETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAV 180


>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
          Length = 541

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 5/192 (2%)

Query: 26  LRMSKHTDAAEEVLLEKK-GCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLI 84
           +R+++      +++++K+ G T ++   R    NAL   +I+++   L     D     +
Sbjct: 275 IRLTESAITYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSK--L 332

Query: 85  IIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM-LNNAVGSCQKPYVALIHGIT 143
           ++  A G  FC G D        +  +  A +   +      N     +KP V  ++G  
Sbjct: 333 VLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPA 392

Query: 144 MGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL-GYFLALTGFRL 202
           +G G  +        A EK  F  P T  G  PD       P++ GK     + + G +L
Sbjct: 393 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 452

Query: 203 KGRDVYRAGIAT 214
             R+    G+ +
Sbjct: 453 TAREACAKGLVS 464


>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
          Length = 541

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 5/192 (2%)

Query: 26  LRMSKHTDAAEEVLLEKK-GCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLI 84
           +R+++      +++++K+ G T ++   R    NAL   +I+++   L     D     +
Sbjct: 275 IRLTESAITYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSK--L 332

Query: 85  IIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM-LNNAVGSCQKPYVALIHGIT 143
           ++  A G  FC G D        +  +  A +   +      N     +KP V  ++G  
Sbjct: 333 VLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPA 392

Query: 144 MGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL-GYFLALTGFRL 202
           +G G  +        A EK  F  P T  G  PD       P++ GK     + + G +L
Sbjct: 393 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 452

Query: 203 KGRDVYRAGIAT 214
             R+    G+ +
Sbjct: 453 TAREACAKGLVS 464


>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
           sapiens]
          Length = 364

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 22/201 (10%)

Query: 30  KHTDAAEEVLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGA 89
           K T     V+  + G T ++  NRPK  NA+   M  +I   LK   +D    +I +   
Sbjct: 105 KSTGFETLVVTSEDGITKIM-FNRPKKKNAINTEMYHEIMRALKAASKDDS--IITVLTG 161

Query: 90  GGKAFCAGGDIRVISE------AEKAKQKIAPVFFREEYMLNNAVG---SCQKPYVALIH 140
            G  + +G D+   ++       EKAK            +L   VG      KP +A+++
Sbjct: 162 NGDYYSSGNDLTNFTDIPPGGVEEKAKNNAV--------LLREFVGCFIDFPKPLIAVVN 213

Query: 141 GITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL-GYFLALTG 199
           G  +G  V L        A+++  F  P + +G  P+    Y  P++        + + G
Sbjct: 214 GPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFG 273

Query: 200 FRLKGRDVYRAGIATH-FVDS 219
            +L   +    G+ T  F DS
Sbjct: 274 KKLTAGEACAQGLVTEVFPDS 294


>gi|221307494 chromodomain protein, Y chromosome-like isoform a
           [Homo sapiens]
          Length = 544

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 12/183 (6%)

Query: 38  VLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAG 97
           V+ ++ G T ++   +    N+L   ++R++   L     D    +++   A G  FC G
Sbjct: 291 VVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLL--SAVGSVFCCG 348

Query: 98  GDI-----RVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSV 152
            D      R+  + ++   K+A           N     +KP +  ++G  +G G  +  
Sbjct: 349 LDFIYFIRRLTDDRKRESTKMAEAIRN----FVNTFIQFKKPIIVAVNGPAIGLGASILP 404

Query: 153 HGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQ-GKLGYFLALTGFRLKGRDVYRAG 211
                 A EK  F  P T  G  PD       P++  G     + L+G +L  ++    G
Sbjct: 405 LCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKG 464

Query: 212 IAT 214
           + +
Sbjct: 465 LVS 467


>gi|221136756 chromodomain protein, Y chromosome-like isoform d
           [Homo sapiens]
          Length = 412

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 12/183 (6%)

Query: 38  VLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAG 97
           V+ ++ G T ++   +    N+L   ++R++   L     D    +++   A G  FC G
Sbjct: 159 VVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLL--SAVGSVFCCG 216

Query: 98  GDI-----RVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSV 152
            D      R+  + ++   K+A           N     +KP +  ++G  +G G  +  
Sbjct: 217 LDFIYFIRRLTDDRKRESTKMAEAIRN----FVNTFIQFKKPIIVAVNGPAIGLGASILP 272

Query: 153 HGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQ-GKLGYFLALTGFRLKGRDVYRAG 211
                 A EK  F  P T  G  PD       P++  G     + L+G +L  ++    G
Sbjct: 273 LCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKG 332

Query: 212 IAT 214
           + +
Sbjct: 333 LVS 335


>gi|221136753 chromodomain protein, Y chromosome-like isoform d
           [Homo sapiens]
          Length = 412

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 12/183 (6%)

Query: 38  VLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAG 97
           V+ ++ G T ++   +    N+L   ++R++   L     D    +++   A G  FC G
Sbjct: 159 VVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLL--SAVGSVFCCG 216

Query: 98  GDI-----RVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSV 152
            D      R+  + ++   K+A           N     +KP +  ++G  +G G  +  
Sbjct: 217 LDFIYFIRRLTDDRKRESTKMAEAIRN----FVNTFIQFKKPIIVAVNGPAIGLGASILP 272

Query: 153 HGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQ-GKLGYFLALTGFRLKGRDVYRAG 211
                 A EK  F  P T  G  PD       P++  G     + L+G +L  ++    G
Sbjct: 273 LCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKG 332

Query: 212 IAT 214
           + +
Sbjct: 333 LVS 335


>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
           3 [Homo sapiens]
          Length = 226

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 9/168 (5%)

Query: 64  MIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM 123
           M+ Q+  ++ + E   E   +I++GA    F +G D+  +      +  +A   F    M
Sbjct: 1   MMLQLLEKVIELENWTEGKGLIVRGAKN-TFSSGSDLNAVKSLGTPEDGMAVCMF----M 55

Query: 124 LNNAVGSCQKPY--VALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGG 181
            N      + P   VAL+ G  +GGG   +    FR+ T +         +G+ P  GG 
Sbjct: 56  QNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGT 115

Query: 182 YFLPRLQGKLGYFLALTG-FRLKGRDVYRAGIATHFV-DSEKLAMLEE 227
             L  + G       L+G  +L  ++    G+    +  S++   LEE
Sbjct: 116 TRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEE 163


>gi|117414154 sodium channel associated protein 2 isoform b [Homo
           sapiens]
          Length = 939

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 8/139 (5%)

Query: 201 RLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFI 260
           +LKG++V    I   +    +    + +LL       + +    EN   + K +RDKS  
Sbjct: 792 QLKGKEVELEEIRKAYSTLNRKWHDKGELLCHLETQVKEVKEKFENKEKKLKAERDKSIE 851

Query: 261 LEEH-MDKINSCFSA--NTVEEIIENLQQDGSSFALEQLKVIN--KMSPTSLKITLRQLM 315
           L+++ M+K++S   A    V+ I+E  Q + +  A E+ K I+   +    ++  +R+L+
Sbjct: 852 LQKNAMEKLHSMDDAFKRQVDAIVEAHQAEIAQLANEKQKCIDSANLKVHQIEKEMRELL 911

Query: 316 EGSSKTLQEVLTMEYRLSQ 334
           E   +T +   TME ++ Q
Sbjct: 912 E---ETCKNKKTMEAKIKQ 927


>gi|117414162 sodium channel associated protein 2 isoform a [Homo
            sapiens]
          Length = 1032

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 8/139 (5%)

Query: 201  RLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFI 260
            +LKG++V    I   +    +    + +LL       + +    EN   + K +RDKS  
Sbjct: 885  QLKGKEVELEEIRKAYSTLNRKWHDKGELLCHLETQVKEVKEKFENKEKKLKAERDKSIE 944

Query: 261  LEEH-MDKINSCFSA--NTVEEIIENLQQDGSSFALEQLKVIN--KMSPTSLKITLRQLM 315
            L+++ M+K++S   A    V+ I+E  Q + +  A E+ K I+   +    ++  +R+L+
Sbjct: 945  LQKNAMEKLHSMDDAFKRQVDAIVEAHQAEIAQLANEKQKCIDSANLKVHQIEKEMRELL 1004

Query: 316  EGSSKTLQEVLTMEYRLSQ 334
            E   +T +   TME ++ Q
Sbjct: 1005 E---ETCKNKKTMEAKIKQ 1020


>gi|29294627 PTPRF interacting protein binding protein 1 isoform 1
           [Homo sapiens]
          Length = 1005

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 217 VDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANT 276
           V  E+LA LE D    K      ++ + +    + +  RD  F LEEH +K+N+      
Sbjct: 101 VYQERLARLEND----KESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKVNA------ 150

Query: 277 VEEIIENLQQDGSSFALEQLKVINKMSPTSLKIT 310
            EE+++      +S   ++L ++ ++S   LK+T
Sbjct: 151 TEEMLQQELLSRTSLETQKLDLMAEISNLKLKLT 184


>gi|111955063 GTP-binding protein 10 isoform 1 [Homo sapiens]
          Length = 308

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 40/195 (20%), Positives = 89/195 (45%), Gaps = 29/195 (14%)

Query: 88  GAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLN------------NAVGSC---Q 132
           G GGK    GGD+ V+++     +++   + R+ ++              +++ SC    
Sbjct: 37  GEGGK----GGDVWVVAQNRMTLKQLKDRYPRKRFVAGVGANSKFPNAGKSSLLSCVSHA 92

Query: 133 KPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGY-FLPRLQG-- 189
           KP +A     T+   +G  ++  F+  +   +  +P    G   + G G+ FL  ++   
Sbjct: 93  KPAIADYAFTTLKPELGKIMYSDFKQIS---VADLPGLIEGAHMNKGMGHKFLKHIERTR 149

Query: 190 KLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLL---ALKSPSKENIASVLEN 246
           +L + + ++GF+L     YR    T  + +++L + +E+L    AL + +K ++    + 
Sbjct: 150 QLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDK 209

Query: 247 YH-TESKIDRDKSFI 260
           +H   S++   K F+
Sbjct: 210 FHELMSQLQNPKDFL 224


>gi|50593027 enoyl Coenzyme A hydratase domain containing 1 isoform
           2 [Homo sapiens]
          Length = 145

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 47  GVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVI 103
           G++TLN P  +NA +  M+ Q+  ++ + E   E   +I++GA    F +G D+  +
Sbjct: 59  GILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGA-KNTFSSGSDLNAV 114


>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
          Length = 976

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 8/110 (7%)

Query: 218 DSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTV 277
           D EK+  LE++     +  ++ ++ +L     +    +D +F+LEE  DK+N       +
Sbjct: 246 DYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKL 305

Query: 278 EEIIENLQQD-----GSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTL 322
           +   ENL+Q        +  LE +KV  + S ++ K  L + ++ ++KT+
Sbjct: 306 QS--ENLKQSIEKQHHLTKELEDIKVSLQRSVSTQK-ALEEDLQIATKTI 352


>gi|19923599 calmin [Homo sapiens]
          Length = 1002

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 233 KSPSKENIASVLENYHTESKIDRDKSFILEEHMDKI-NSCFSANTVEEIIENLQQDGSSF 291
           +SP+ ENIA+ LE   T+  I   K     +H+D + +S F A    +  ++L++D S +
Sbjct: 840 ESPNLENIANPLEENVTKESISSKKK-EKRKHVDHVESSLFVAPGSVQSSDDLEEDSSDY 898

Query: 292 ALEQLKVINKMSPTSLKITLRQLMEGSSKT 321
           ++      ++ S +   I LR+    SS++
Sbjct: 899 SIP-----SRTSHSDSSIYLRRHTHRSSES 923


>gi|66363686 NEDD8 activating enzyme E1 subunit 1 isoform b [Homo
           sapiens]
          Length = 528

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 251 SKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKIT 310
           S I ++++    E + ++NS  S + VEE  ENL  +  SF      V+    P S  + 
Sbjct: 73  SSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLR 132

Query: 311 LRQLMEGS 318
           L  ++  S
Sbjct: 133 LADVLWNS 140


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,645,359
Number of Sequences: 37866
Number of extensions: 480717
Number of successful extensions: 1186
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1159
Number of HSP's gapped (non-prelim): 43
length of query: 338
length of database: 18,247,518
effective HSP length: 103
effective length of query: 235
effective length of database: 14,347,320
effective search space: 3371620200
effective search space used: 3371620200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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