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Search of human proteins with 37577132
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37577132 ubiquitin conjugating enzyme E2, J2 isoform 3 [Homo
sapiens]
(207 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37577132 ubiquitin conjugating enzyme E2, J2 isoform 3 [Homo ... 425 e-119
gi|37577130 ubiquitin conjugating enzyme E2, J2 isoform 3 [Homo ... 425 e-119
gi|37577126 ubiquitin conjugating enzyme E2, J2 isoform 1 [Homo ... 425 e-119
gi|37577124 ubiquitin conjugating enzyme E2, J2 isoform 2 [Homo ... 425 e-119
gi|37577122 ubiquitin-conjugating enzyme E2, J1 [Homo sapiens] 100 1e-21
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens] 55 3e-08
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s... 50 1e-06
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa... 50 1e-06
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 50 2e-06
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 50 2e-06
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens] 49 2e-06
gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens] 49 2e-06
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 49 3e-06
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 49 4e-06
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 49 4e-06
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 49 4e-06
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 49 4e-06
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 4e-06
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 4e-06
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 4e-06
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 4e-06
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 4e-06
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 4e-06
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa... 49 4e-06
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] 46 2e-05
gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens] 46 3e-05
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 46 3e-05
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 44 1e-04
gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo sa... 43 2e-04
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi... 43 2e-04
>gi|37577132 ubiquitin conjugating enzyme E2, J2 isoform 3 [Homo
sapiens]
Length = 207
Score = 425 bits (1093), Expect = e-119
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 60
MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS
Sbjct: 1 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 60
Query: 61 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 120
TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK
Sbjct: 61 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 120
Query: 121 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 180
AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA
Sbjct: 121 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 180
Query: 181 LANLFVIVGFAAFAYTVKYVLRSIAQE 207
LANLFVIVGFAAFAYTVKYVLRSIAQE
Sbjct: 181 LANLFVIVGFAAFAYTVKYVLRSIAQE 207
>gi|37577130 ubiquitin conjugating enzyme E2, J2 isoform 3 [Homo
sapiens]
Length = 207
Score = 425 bits (1093), Expect = e-119
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 60
MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS
Sbjct: 1 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 60
Query: 61 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 120
TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK
Sbjct: 61 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 120
Query: 121 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 180
AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA
Sbjct: 121 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 180
Query: 181 LANLFVIVGFAAFAYTVKYVLRSIAQE 207
LANLFVIVGFAAFAYTVKYVLRSIAQE
Sbjct: 181 LANLFVIVGFAAFAYTVKYVLRSIAQE 207
>gi|37577126 ubiquitin conjugating enzyme E2, J2 isoform 1 [Homo
sapiens]
Length = 275
Score = 425 bits (1093), Expect = e-119
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 60
MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS
Sbjct: 69 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 128
Query: 61 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 120
TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK
Sbjct: 129 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 188
Query: 121 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 180
AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA
Sbjct: 189 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 248
Query: 181 LANLFVIVGFAAFAYTVKYVLRSIAQE 207
LANLFVIVGFAAFAYTVKYVLRSIAQE
Sbjct: 249 LANLFVIVGFAAFAYTVKYVLRSIAQE 275
>gi|37577124 ubiquitin conjugating enzyme E2, J2 isoform 2 [Homo
sapiens]
Length = 259
Score = 425 bits (1093), Expect = e-119
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 60
MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS
Sbjct: 53 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 112
Query: 61 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 120
TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK
Sbjct: 113 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 172
Query: 121 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 180
AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA
Sbjct: 173 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 232
Query: 181 LANLFVIVGFAAFAYTVKYVLRSIAQE 207
LANLFVIVGFAAFAYTVKYVLRSIAQE
Sbjct: 233 LANLFVIVGFAAFAYTVKYVLRSIAQE 259
>gi|37577122 ubiquitin-conjugating enzyme E2, J1 [Homo sapiens]
Length = 318
Score = 100 bits (248), Expect = 1e-21
Identities = 42/95 (44%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 4 YEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTIL 63
++GG YHG+++ P E+P KPPSI ++T NGRF+ ++CLSI+ HP+TW P+WS+ T L
Sbjct: 53 FDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTAL 112
Query: 64 TGLLSFMVEKGP-TLGSIETSDFTKRQLAVQSLAF 97
++ FM KG +GS++ + +R LA +S F
Sbjct: 113 LAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDF 147
>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
Length = 197
Score = 55.5 bits (132), Expect = 3e-08
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHP-DTWNPAWS 58
TPYE G + ++I P +PF+PP I +TP + R+CL + P W P+ +
Sbjct: 44 TPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLN 103
Query: 59 VSTILTGLLSFMVEKGP--TLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIK 116
++T+LT + M E P L + +S+F + A A +K +
Sbjct: 104 IATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEK-----------HAR 152
Query: 117 QKQKAQDE 124
QKQKA +E
Sbjct: 153 QKQKADEE 160
>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
sapiens]
Length = 176
Score = 50.4 bits (119), Expect = 1e-06
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 4 YEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVST 61
YEGG + + F E+PFKPP + T N++ +CL D D W+PA ++S
Sbjct: 74 YEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISK 130
Query: 62 ILTGLLSFMVE---KGPTLGSIETSDFTKR 88
+L + S + + P +GSI T T R
Sbjct: 131 VLLSICSLLTDCNPADPLVGSIATQYMTNR 160
>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 50.4 bits (119), Expect = 1e-06
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 4 YEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVST 61
YEGG + + F E+PFKPP + T N++ +CL D D W+PA ++S
Sbjct: 91 YEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISK 147
Query: 62 ILTGLLSFMVE---KGPTLGSIETSDFTKR 88
+L + S + + P +GSI T T R
Sbjct: 148 VLLSICSLLTDCNPADPLVGSIATQYMTNR 177
>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 4 YEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVST 61
YEGG + + F ++PFKPP + T N++ +CL D D W+PA ++S
Sbjct: 105 YEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISK 161
Query: 62 ILTGLLSFMVE---KGPTLGSIETSDFTKR 88
+L + S + + P +GSI T T R
Sbjct: 162 VLLSICSLLTDCNPADPLVGSIATQYLTNR 191
>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 4 YEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVST 61
YEGG + + F ++PFKPP + T N++ +CL D D W+PA ++S
Sbjct: 105 YEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISK 161
Query: 62 ILTGLLSFMVE---KGPTLGSIETSDFTKR 88
+L + S + + P +GSI T T R
Sbjct: 162 VLLSICSLLTDCNPADPLVGSIATQYLTNR 191
>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
Length = 201
Score = 49.3 bits (116), Expect = 2e-06
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 4 YEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVST 61
YEGG + + F ++PFKPP + T N++ +CL D D W+PA ++S
Sbjct: 99 YEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISK 155
Query: 62 ILTGLLSFMVE---KGPTLGSIETSDFTKR 88
+L + S + + P +GSI T T R
Sbjct: 156 VLLSICSLLTDCNPADPLVGSIATQYMTNR 185
>gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]
Length = 354
Score = 49.3 bits (116), Expect = 2e-06
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMITP-------NGRFKCNTRLCLSIT-DFHPDTW 53
TPYEGG++ P ++P PP + ++T N F N ++CLSI + W
Sbjct: 141 TPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAW 200
Query: 54 NPAWSVSTILTGLLSFMVE 72
+PA S+S++L + S M E
Sbjct: 201 SPAQSISSVLISIQSLMTE 219
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 48.9 bits (115), Expect = 3e-06
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSV 59
+PY+GG + + FP ++PFKPP + T + N +CL D W+PA +V
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICL---DILRSQWSPALTV 99
Query: 60 STILTGLLSFMVEKGP 75
S +L + S + + P
Sbjct: 100 SKVLLSICSLLCDPNP 115
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 14 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 68
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 69 TISKVLLSICSLLCDPNP 86
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 97
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 98 TISKVLLSICSLLCDPNP 115
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 45 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 99
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 100 TISKVLLSICSLLCDPNP 117
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 97
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 98 TISKVLLSICSLLCDPNP 115
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 97
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 98 TISKVLLSICSLLCDPNP 115
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 97
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 98 TISKVLLSICSLLCDPNP 115
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 97
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 98 TISKVLLSICSLLCDPNP 115
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 97
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 98 TISKVLLSICSLLCDPNP 115
>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 97
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 98 TISKVLLSICSLLCDPNP 115
>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 97
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 98 TISKVLLSICSLLCDPNP 115
>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAW 57
+PY+GG + + FP ++PFKPP + T PN N +CL D W+PA
Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPAL 97
Query: 58 SVSTILTGLLSFMVEKGP 75
++S +L + S + + P
Sbjct: 98 TISKVLLSICSLLCDPNP 115
>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
Length = 238
Score = 46.2 bits (108), Expect = 2e-05
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 16/85 (18%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHP--------- 50
T YEGGY+ + FP ++P+ PP+ +T + N +C+SI HP
Sbjct: 51 TLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISI--LHPPVDDPQSGE 108
Query: 51 ---DTWNPAWSVSTILTGLLSFMVE 72
+ WNP +V TIL ++S + E
Sbjct: 109 LPSERWNPTQNVRTILLSVISLLNE 133
>gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]
Length = 236
Score = 45.8 bits (107), Expect = 3e-05
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 16/85 (18%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHP--------- 50
T YEGGY+ +L FP ++P+ PP+ +T + +C+SI HP
Sbjct: 51 TYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISI--LHPPVDDPQSGE 108
Query: 51 ---DTWNPAWSVSTILTGLLSFMVE 72
+ WNP +V TIL ++S + E
Sbjct: 109 LPSERWNPTQNVRTILLSVISLLNE 133
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 45.8 bits (107), Expect = 3e-05
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 4 YEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVST 61
Y+GG + + FP ++PFKPP I T + N +CL D W+PA +VS
Sbjct: 45 YQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICL---DILRSQWSPALTVSK 101
Query: 62 ILTGLLSFMVEKGP 75
+L + S + + P
Sbjct: 102 VLLSICSLLCDPNP 115
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 43.9 bits (102), Expect = 1e-04
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSV 59
TP+E G + + F E+P KPP++ ++ + + +CL I + W+P + V
Sbjct: 46 TPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQ---NRWSPTYDV 102
Query: 60 STILTGLLSFMVEKGP 75
S+ILT + S + E P
Sbjct: 103 SSILTSIQSLLDEPNP 118
>gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo
sapiens]
Length = 157
Score = 43.1 bits (100), Expect = 2e-04
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVST 61
TPYEGG Y ++ P +PF PP + IT ++ D D W A ++ T
Sbjct: 49 TPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRT 108
Query: 62 ILTGLLSFMVEKGP 75
+L L + + P
Sbjct: 109 VLLSLQALLAAAEP 122
>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
sapiens]
Length = 200
Score = 43.1 bits (100), Expect = 2e-04
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 2 TPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVST 61
TPYEGG Y ++ P +PF PP + IT ++ D D W A ++ T
Sbjct: 49 TPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRT 108
Query: 62 ILTGLLSFMVEKGP 75
+L L + + P
Sbjct: 109 VLLSLQALLAAAEP 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,450,371
Number of Sequences: 37866
Number of extensions: 373038
Number of successful extensions: 1131
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1062
Number of HSP's gapped (non-prelim): 76
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.