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Search of human proteins with 34577055
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34577055 F-box only protein 30 [Homo sapiens]
(745 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34577055 F-box only protein 30 [Homo sapiens] 1526 0.0
gi|156546888 F-box protein 40 [Homo sapiens] 394 e-109
gi|22027630 TNF receptor-associated factor 6 [Homo sapiens] 35 0.33
gi|4759254 TNF receptor-associated factor 6 [Homo sapiens] 35 0.33
gi|22027627 TNF receptor-associated factor 5 [Homo sapiens] 35 0.33
gi|77404348 TNF receptor-associated factor 5 [Homo sapiens] 35 0.33
gi|11321603 TNF receptor-associated factor 5 [Homo sapiens] 35 0.33
gi|160420295 hypothetical protein LOC85459 [Homo sapiens] 34 0.43
gi|31652236 cut-like homeobox 1 isoform b [Homo sapiens] 34 0.56
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 34 0.56
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 32 1.6
gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens] 32 2.8
gi|45594312 TNF receptor-associated factor 7 [Homo sapiens] 32 2.8
gi|221139840 transmembrane protein 25 isoform 5 [Homo sapiens] 32 2.8
gi|71774197 ubiquitin specific protease 47 [Homo sapiens] 32 2.8
gi|24308241 zinc finger and BTB domain containing 2 [Homo sapiens] 32 2.8
gi|221139834 transmembrane protein 25 isoform 3 [Homo sapiens] 31 3.7
gi|221139830 transmembrane protein 25 isoform 2 [Homo sapiens] 31 3.7
gi|221219039 transmembrane protein 25 isoform 2 [Homo sapiens] 31 3.7
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 31 3.7
gi|134304838 eukaryotic translation initiation factor 2-alpha ki... 31 3.7
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 31 3.7
gi|22027622 TNF receptor-associated factor 4 [Homo sapiens] 31 3.7
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] 31 3.7
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens] 31 3.7
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] 31 3.7
gi|205277343 growth factor independent 1B transcription represso... 31 4.8
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 31 4.8
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 31 4.8
gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo ... 31 4.8
>gi|34577055 F-box only protein 30 [Homo sapiens]
Length = 745
Score = 1526 bits (3951), Expect = 0.0
Identities = 745/745 (100%), Positives = 745/745 (100%)
Query: 1 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC 60
MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC
Sbjct: 1 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC 60
Query: 61 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL 120
LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL
Sbjct: 61 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL 120
Query: 121 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG 180
DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG
Sbjct: 121 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG 180
Query: 181 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY 240
ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY
Sbjct: 181 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY 240
Query: 241 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN 300
EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN
Sbjct: 241 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN 300
Query: 301 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE 360
QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE
Sbjct: 301 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE 360
Query: 361 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL 420
GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL
Sbjct: 361 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL 420
Query: 421 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA 480
QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA
Sbjct: 421 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA 480
Query: 481 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH 540
SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH
Sbjct: 481 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH 540
Query: 541 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP 600
GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP
Sbjct: 541 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP 600
Query: 601 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ 660
ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ
Sbjct: 601 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ 660
Query: 661 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP 720
WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP
Sbjct: 661 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP 720
Query: 721 LPCMCVTRELTKEGRSLRSVLKPVL 745
LPCMCVTRELTKEGRSLRSVLKPVL
Sbjct: 721 LPCMCVTRELTKEGRSLRSVLKPVL 745
>gi|156546888 F-box protein 40 [Homo sapiens]
Length = 709
Score = 394 bits (1012), Expect = e-109
Identities = 251/745 (33%), Positives = 375/745 (50%), Gaps = 81/745 (10%)
Query: 7 HSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPCLNSDFG 66
H HC C +R C EP SC +I C L+CGA FH CK EH+LLCP E+VPCLNS++G
Sbjct: 12 HRHCEGCFNRHCHIPVEPNTSCLVISCHLLCGATFHMCKEAEHQLLCPLEQVPCLNSEYG 71
Query: 67 CPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQLDMALAL 126
CP +M+R+K+A+HL++CPASVVCC+MEWNRWP ++ +EN+ ++ LD ALA
Sbjct: 72 CPLSMSRHKLAKHLQVCPASVVCCSMEWNRWPNVDSETTLHENIMKETPSEECLDTALA- 130
Query: 127 QDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYGALYQAT 186
L+ KV K + + RE + E P NG + +
Sbjct: 131 ------LQDQKVLFRSLKMVELFPETRE------ATEEEPTMNG-------------ETS 165
Query: 187 VETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNA----RESLEDQNLKDQDHLYEE 242
VE +DI + N + E++ +E ++ ++++ +
Sbjct: 166 VEEMGGAVGGVDI-GLVPHGLSATNGEMAELSQEEREVLAKTKEGMDLVKFGQWENIFSK 224
Query: 243 EIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDT----SALCNGFPLENICTQVID 298
E A TN +A E +D + +S ++ A P EN
Sbjct: 225 EHAASAL-----TNSSASCESKNKNDSEKEQISSGHNMVEGEGAPKKKEPQEN------Q 273
Query: 299 QNQNLHGDSKQSNLT---NGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHIL 355
+ Q++ + + L +G ++ + R +I +P T +
Sbjct: 274 KQQDVRTAMETTGLAPWQDGVLERLKTAVDAKDYNMYLVHNGRMLIHFGQMPACTPK--- 330
Query: 356 MPDDEGEGELCWKKVDLGDVKNVDVLSF--SHAPSFNFLSNSCWS-KPKEDKAVDTSDLE 412
E + + K++ +VK V S+ L ++ S KP E KAVDTSDL
Sbjct: 331 ------ERDFVYGKLEAQEVKTVYTFKVPVSYCGKRARLGDAMLSCKPSEHKAVDTSDLG 384
Query: 413 VAEDPMGLQGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATST 472
+ + L DLI L L G IS+SR D +D TQT++ ++ T
Sbjct: 385 ITVED--LPKSDLIKTTLQCALERELKGHVISESRSIDGLFMDFATQTYNFEPEQFSSGT 442
Query: 473 MVGEIASASACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEF 532
++ ++ +A+ L ++L ECV R K S FTF C + FRR EF
Sbjct: 443 VLADLTAATPGG--------------LHVELHSECVTRRHNKSSSAFTFTCNKFFRRDEF 488
Query: 533 SSHFKNVHGDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPC 592
HFKNVH DI + LNGW + RCPLAY GCT+ Q F P Q AK+I+ + L++F ++P
Sbjct: 489 PLHFKNVHTDIQSCLNGWFQHRCPLAYLGCTFVQNHFRPPGQKAKVIYSQELKTFAIKPE 548
Query: 593 VSTVLVEPARNCVL----GLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCG 648
V+ L E +N L G + L+SLP E+L++IAGFLD SL QLS VS LMR++C
Sbjct: 549 VAPELSEGRKNNHLLGHGGKSQNSLTSLPLEILKYIAGFLDSVSLAQLSQVSVLMRNICA 608
Query: 649 SLLQSRGMVILQWGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCS 708
+LLQ RGMV+LQW K++Y G +SW++ ++W+FS+ F + W+F ++ SM++HLK C
Sbjct: 609 TLLQERGMVLLQWKKKRYSHGGTSWRVHREIWQFSSLFSKIKSWEFNEVTSMSEHLKSCP 668
Query: 709 YNVVEKREEAIPLPCMCVTRELTKE 733
+N+VE + + I L MC RE +E
Sbjct: 669 FNIVEHKTDPILLTSMCQPREQARE 693
>gi|22027630 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 34.7 bits (78), Expect = 0.33
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 47 DEHRLLCPFERVPCLNSDFGCPFTMARNKVAEHLE 81
+ + L CP +PC S FGC M RN +A HL+
Sbjct: 229 NHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQ 263
>gi|4759254 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 34.7 bits (78), Expect = 0.33
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 47 DEHRLLCPFERVPCLNSDFGCPFTMARNKVAEHLE 81
+ + L CP +PC S FGC M RN +A HL+
Sbjct: 229 NHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQ 263
>gi|22027627 TNF receptor-associated factor 5 [Homo sapiens]
Length = 557
Score = 34.7 bits (78), Expect = 0.33
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 33 CPLVCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEH 79
CP C + + DEH +CP C +GC T R + +H
Sbjct: 195 CPNNCAKIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQH 241
>gi|77404348 TNF receptor-associated factor 5 [Homo sapiens]
Length = 557
Score = 34.7 bits (78), Expect = 0.33
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 33 CPLVCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEH 79
CP C + + DEH +CP C +GC T R + +H
Sbjct: 195 CPNNCAKIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQH 241
>gi|11321603 TNF receptor-associated factor 5 [Homo sapiens]
Length = 557
Score = 34.7 bits (78), Expect = 0.33
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 33 CPLVCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEH 79
CP C + + DEH +CP C +GC T R + +H
Sbjct: 195 CPNNCAKIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQH 241
>gi|160420295 hypothetical protein LOC85459 [Homo sapiens]
Length = 2601
Score = 34.3 bits (77), Expect = 0.43
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 204 TRDIGMLNTSVPNDMDEQQNARESLE--DQNLKDQDHLYEEEIGAVGGIDYNDTNQNAQS 261
T+ +G L PN D N +E++ D+N D +HL E+ A ++ + + +S
Sbjct: 1770 TQKMGQLRDWFPNTQDLAGNDQENIRHADRNNSDDNHLASEDTSAKQSGEHLEKDLGRRS 1829
Query: 262 EQNGSSDLLCDLNTSSYDTSAL 283
+ + + C L+ + ++ SA+
Sbjct: 1830 SKPPVAKVKCGLDLNQHELSAI 1851
Score = 30.4 bits (67), Expect = 6.2
Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 6/172 (3%)
Query: 255 TNQNAQSEQNGSSDLLCDLNTSSYDTSALC-NGFPLENICTQVIDQ--NQNLHGDSKQSN 311
T +N SEQ GSS + L S+ + A +G LE + T+ + + +L Q
Sbjct: 1277 TQENTSSEQTGSSSFIPQLVQLSFTSLASAESGTILEPLFTESESKIFSSHLQIPQLQDR 1336
Query: 312 LTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDEGEGELCWKKVD 371
L + + + +A Q II + + +L+ E EG + ++VD
Sbjct: 1337 LLRISQLIQPQQDNLKALQEQLATQREAIILAR---QEAREELLLHQSEWEGRISPEQVD 1393
Query: 372 LGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGLQGI 423
+ V SF+ P N D V + E+ P GL G+
Sbjct: 1394 TSSLPLVPQHSFASLPLNESERNQEPCSINSDNIVSSGHSEIPTLPDGLLGL 1445
>gi|31652236 cut-like homeobox 1 isoform b [Homo sapiens]
Length = 678
Score = 33.9 bits (76), Expect = 0.56
Identities = 49/264 (18%), Positives = 103/264 (39%), Gaps = 24/264 (9%)
Query: 108 ENLSRDVDEVAQLDMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPH 167
E + DE+ + L +QR + + T+ +++S + + S + + P
Sbjct: 231 EETTAKADEIEMIMTDLERANQRAEVAQREAETLR----EQLSSANHSLQLASQIQKAPD 286
Query: 168 ANGLVSVDEESYGALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARES 227
E++ L ++++E LAA + D+ L S+ + +
Sbjct: 287 V-------EQAIEVLTRSSLEV--ELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQ 337
Query: 228 LEDQNLKDQDHLYEEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGF 287
LE Q L + E G DY + + + S + + D +
Sbjct: 338 LEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILK--SMEFAPSEGAGTQDAAK----- 390
Query: 288 PLENICTQVIDQNQNLHGDSKQSNLTNGDCVAS-SDGTSKPSSSLAVAAQLREIIPSSAL 346
PLE + ++++N++L ++ ++N D ++ + + ++A A + RE+I
Sbjct: 391 PLEVL---LLEKNRSLQSENAALRISNSDLSGRCAELQVRITEAVATATEQRELIARLEQ 447
Query: 347 PNGTVQHILMPDDEGEGELCWKKV 370
+Q I PD EG E +K+
Sbjct: 448 DLSIIQSIQRPDAEGAAEHRLEKI 471
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 33.9 bits (76), Expect = 0.56
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 578 IIHDRHLRSFGVQPCVSTVLVEPARNCVLGLHNDHL--------SSLPFEVLQHIAGFLD 629
++H R L QP +S++ AR +GL DHL S LP + L + G D
Sbjct: 466 LVHSRPLAQPRPQPSLSSLDSPSARGVRVGLARDHLCCLPISVFSPLPLQNLLQVKGLFD 525
Query: 630 GFSLC 634
G S C
Sbjct: 526 GTSGC 530
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 32.3 bits (72), Expect = 1.6
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 22/214 (10%)
Query: 216 NDMDEQQNARESLEDQNLKDQDHLY--EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDL 273
+ +++ Q + S++ +NL+ ++H+ EEE+ + NQ++ S N LL +
Sbjct: 590 DQLNKSQESNVSIQKENLELKEHIRQNEEELSRIRNELMQSLNQDSNS--NFKDTLLKER 647
Query: 274 NTSSYDTSALCNGFPLENICTQVIDQNQNLHGDSKQSNLTNGDCV-ASSDGTSKPSSSLA 332
+ L+ +++ N+NL + + N V A D + LA
Sbjct: 648 EAEVRN---------LKQNLSELEQLNENLKKVAFDVKMENEKLVLACEDVRHQLEECLA 698
Query: 333 VAAQLREIIPSSALPNGTVQHILMPDDEGEGELCWKKVDLGDVKNVDVLSFSHAPSFNFL 392
QL S N V+ + M E E ELCW K L + N + + L
Sbjct: 699 GNNQL------SLEKNTIVETLKMEKGEIEAELCWAKKRLLEEANKYEKTIEELSNARNL 752
Query: 393 SNSCWSKPKED--KAVDTSDLEVAEDPMGLQGID 424
+ S E K D+E+AE ++ +D
Sbjct: 753 NTSALQLEHEHLIKLNQKKDMEIAELKKNIEQMD 786
>gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens]
Length = 676
Score = 31.6 bits (70), Expect = 2.8
Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 16/242 (6%)
Query: 131 MLLESLKVATMMSKATDKVSKP-REQISVKSSVPEIPHANGLVSVDEESYGALYQATVET 189
M++ L+ A ++ + ++ REQ+S S+ + A+ + + + L ++++E
Sbjct: 242 MIMTDLERANQRAEVAQREAETLREQLS--SANHSLQLASQIQKAPDVAIEVLTRSSLEV 299
Query: 190 TRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLYEEEIGAVGG 249
LAA + D+ L S+ + + LE Q L + E G
Sbjct: 300 --ELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQ 357
Query: 250 IDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQNQNLHGDSKQ 309
DY + + + S + + D + PLE + ++++N++L ++
Sbjct: 358 ADYEEVKKELNILK--SMEFAPSEGAGTQDAAK-----PLEVL---LLEKNRSLQSENAA 407
Query: 310 SNLTNGDCVAS-SDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDEGEGELCWK 368
++N D ++ + + ++A A + RE+I +Q I PD EG E +
Sbjct: 408 LRISNSDLSGRCAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLE 467
Query: 369 KV 370
K+
Sbjct: 468 KI 469
>gi|45594312 TNF receptor-associated factor 7 [Homo sapiens]
Length = 670
Score = 31.6 bits (70), Expect = 2.8
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 22/107 (20%)
Query: 56 ERVPCLNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVD 115
E + C +S +GC F ++ HLE C + K + L + D
Sbjct: 255 EHIKCPHSKYGCTFIGNQDTYETHLETC----------------RFEGLKEF--LQQTDD 296
Query: 116 EVAQLDMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSV 162
++ +ALA +DQ + + +M+ K ++K+ + + + +K V
Sbjct: 297 RFHEMHVALAQKDQEIAF----LRSMLGKLSEKIDQLEKSLELKFDV 339
>gi|221139840 transmembrane protein 25 isoform 5 [Homo sapiens]
Length = 306
Score = 31.6 bits (70), Expect = 2.8
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 11/134 (8%)
Query: 148 KVSKPREQISVKSSVPEIPHANGLVSVDEESYGALYQATVETT-RSLAAALDILNTATRD 206
+ + P + P + + + +D ++Y L TV+ RSLA L ++ AT D
Sbjct: 156 RANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVV--ATND 213
Query: 207 IGMLNTSVPNDMDEQQNARESLEDQNLK-DQDHLYEEEIGAVGGIDYNDTNQNA------ 259
+G+ + S+P + + S + NLK + L E + + ND ++
Sbjct: 214 VGVTSASLPAPGPSRHPSLISSDSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRVKPAD 273
Query: 260 -QSEQNGSSDLLCD 272
Q QN S L D
Sbjct: 274 RQMAQNNSRPELLD 287
>gi|71774197 ubiquitin specific protease 47 [Homo sapiens]
Length = 1287
Score = 31.6 bits (70), Expect = 2.8
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 20/132 (15%)
Query: 192 SLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLYEEEIGAVGGID 251
SL + IL +T + L+ D D +++ + + L E + A +D
Sbjct: 777 SLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERDSSA--SVD 834
Query: 252 YNDTNQ--------NAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQNQNL 303
+ Q N QSE+ SD+ D +TSS D+ L + + +C
Sbjct: 835 NRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLC---------- 884
Query: 304 HGDSKQSNLTNG 315
+ D+ Q L NG
Sbjct: 885 NADNAQIPLANG 896
>gi|24308241 zinc finger and BTB domain containing 2 [Homo sapiens]
Length = 514
Score = 31.6 bits (70), Expect = 2.8
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 16/123 (13%)
Query: 455 DVGTQTFSLPSAILATSTMVGEIASASACDHANPQLSNPSPFQTLGLDLVLECVARYQPK 514
D+G +P A + + + + I+ + D Q P P +D + + + K
Sbjct: 301 DLGKDAMEVPEAGMISDSELQHISDSPIID-GQQQSETPPPSDIADIDNLEQADQEREVK 359
Query: 515 QRSMFTFVCGQLFRRKEFSSHFKNVHGDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQ 574
+R +CG+ F +K SH++ H IH G + C+ + FC + Q
Sbjct: 360 RRKYECTICGRKFIQK---SHWRE-HMYIHTG-----------KPFKCSTCDKSFCRANQ 404
Query: 575 GAK 577
A+
Sbjct: 405 AAR 407
>gi|221139834 transmembrane protein 25 isoform 3 [Homo sapiens]
Length = 218
Score = 31.2 bits (69), Expect = 3.7
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 148 KVSKPREQISVKSSVPEIPHANGLVSVDEESYGALYQATVETT-RSLAAALDILNTATRD 206
+ + P + P + + + +D ++Y L TV+ RSLA L ++ AT D
Sbjct: 52 RANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVV--ATND 109
Query: 207 IGMLNTSVPNDMDEQQNARESLEDQNLK-DQDHLYEEEIGAVGGIDYNDTNQNA------ 259
+G+ + S+P + + S + NLK + L E + + ND ++
Sbjct: 110 VGVTSASLPAPGPSRHPSLISSDSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPA 169
Query: 260 --QSEQNGSSDLLCD 272
Q QN S L D
Sbjct: 170 DRQMAQNNSRPELLD 184
>gi|221139830 transmembrane protein 25 isoform 2 [Homo sapiens]
Length = 322
Score = 31.2 bits (69), Expect = 3.7
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 148 KVSKPREQISVKSSVPEIPHANGLVSVDEESYGALYQATVETT-RSLAAALDILNTATRD 206
+ + P + P + + + +D ++Y L TV+ RSLA L ++ AT D
Sbjct: 156 RANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVV--ATND 213
Query: 207 IGMLNTSVPNDMDEQQNARESLEDQNLK-DQDHLYEEEIGAVGGIDYNDTNQNA------ 259
+G+ + S+P + + S + NLK + L E + + ND ++
Sbjct: 214 VGVTSASLPAPGPSRHPSLISSDSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPA 273
Query: 260 --QSEQNGSSDLLCD 272
Q QN S L D
Sbjct: 274 DRQMAQNNSRPELLD 288
>gi|221219039 transmembrane protein 25 isoform 2 [Homo sapiens]
Length = 322
Score = 31.2 bits (69), Expect = 3.7
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 148 KVSKPREQISVKSSVPEIPHANGLVSVDEESYGALYQATVETT-RSLAAALDILNTATRD 206
+ + P + P + + + +D ++Y L TV+ RSLA L ++ AT D
Sbjct: 156 RANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVV--ATND 213
Query: 207 IGMLNTSVPNDMDEQQNARESLEDQNLK-DQDHLYEEEIGAVGGIDYNDTNQNA------ 259
+G+ + S+P + + S + NLK + L E + + ND ++
Sbjct: 214 VGVTSASLPAPGPSRHPSLISSDSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPA 273
Query: 260 --QSEQNGSSDLLCD 272
Q QN S L D
Sbjct: 274 DRQMAQNNSRPELLD 288
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 31.2 bits (69), Expect = 3.7
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 211 NTSVPNDMDEQQNARESLEDQNLKDQDHLYEEEIGAVGGIDYNDTNQNAQSEQNGSSDLL 270
N+S +D + N+ ES + + D D + D + +N + S+ + SSD
Sbjct: 685 NSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSS 744
Query: 271 CDLNTSSYDTSALCNGFPLENICTQVIDQNQNLHGDSKQSNLTNGDCVASSDGTSKPSSS 330
++S+ S+ + + + D + + DS S+ +N D SSD + +SS
Sbjct: 745 DSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDS--SDSSNSSDSN-DSSNSSDSSDSSNSS 801
>gi|134304838 eukaryotic translation initiation factor 2-alpha
kinase 3 [Homo sapiens]
Length = 1116
Score = 31.2 bits (69), Expect = 3.7
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 16/113 (14%)
Query: 479 SASACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKN 538
S+ + A +S P P TL LDL + QP ++ ++ QL R++
Sbjct: 844 SSKSSSEATLSISPPRP-TTLSLDLTKNTTEKLQPSSPKVYLYIQMQLCRKE-------- 894
Query: 539 VHGDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQP 591
L WM RC + + F + + +H + L ++P
Sbjct: 895 -------NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKP 940
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 31.2 bits (69), Expect = 3.7
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 31/167 (18%)
Query: 104 RKSYENLSRDV----DEVAQLDMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVK 159
++ +E LS++ +E+ + Q++ +E + T +S DK+SK + S+K
Sbjct: 813 KQDFETLSQETKIQHEELNNRIQTTVTELQKVKMEKEALMTELSTVKDKLSKVSD--SLK 870
Query: 160 SSVPEIPHANGLVSVDEESYGALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMD 219
+S E N + AA LD+ T L + N +
Sbjct: 871 NSKSEFEKEN--------------------QKGKAAILDLEKTCKELKHQLQVQMENTLK 910
Query: 220 EQQNARESLEDQNLKDQDHLYEEEIGAVGG---IDYNDTNQNAQSEQ 263
EQ+ ++SLE + K+ H + E+ ++ N QN + EQ
Sbjct: 911 EQKELKKSLEKE--KEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQ 955
>gi|22027622 TNF receptor-associated factor 4 [Homo sapiens]
Length = 470
Score = 31.2 bits (69), Expect = 3.7
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 22 PEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEH-L 80
P+ + C+ GC G + S H +CP E V C N C M R +A+H
Sbjct: 135 PKRRLKCEFCGCDF-SGEAYES-----HEGMCPQESVYCENK---CGARMMRRLLAQHAT 185
Query: 81 EMCPASVVCCT 91
CP CT
Sbjct: 186 SECPKRTQPCT 196
>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
Length = 2365
Score = 31.2 bits (69), Expect = 3.7
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 249 GIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGF---PLENICTQVIDQNQNLHG 305
G+ D+ ++ S +G SD + +L+T +TS+ + + P + + + H
Sbjct: 853 GLGDADSWDDSSSVSSGISDTIDNLSTDDINTSSSISSYANTPASSRKNLDVQTDAEKHS 912
Query: 306 DSKQSNLTNGDCVASSDGTS 325
++++L +GD V SDG S
Sbjct: 913 QVERNSLWSGDDVKKSDGGS 932
>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
Length = 2432
Score = 31.2 bits (69), Expect = 3.7
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 249 GIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGF---PLENICTQVIDQNQNLHG 305
G+ D+ ++ S +G SD + +L+T +TS+ + + P + + + H
Sbjct: 917 GLGDADSWDDSSSVSSGISDTIDNLSTDDINTSSSISSYANTPASSRKNLDVQTDAEKHS 976
Query: 306 DSKQSNLTNGDCVASSDGTS 325
++++L +GD V SDG S
Sbjct: 977 QVERNSLWSGDDVKKSDGGS 996
>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
Length = 2429
Score = 31.2 bits (69), Expect = 3.7
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 249 GIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGF---PLENICTQVIDQNQNLHG 305
G+ D+ ++ S +G SD + +L+T +TS+ + + P + + + H
Sbjct: 917 GLGDADSWDDSSSVSSGISDTIDNLSTDDINTSSSISSYANTPASSRKNLDVQTDAEKHS 976
Query: 306 DSKQSNLTNGDCVASSDGTS 325
++++L +GD V SDG S
Sbjct: 977 QVERNSLWSGDDVKKSDGGS 996
>gi|205277343 growth factor independent 1B transcription repressor
isoform 1 [Homo sapiens]
Length = 330
Score = 30.8 bits (68), Expect = 4.8
Identities = 44/184 (23%), Positives = 65/184 (35%), Gaps = 22/184 (11%)
Query: 362 EGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGLQ 421
EG + + GD D F + PSF++ + + +A T E + L
Sbjct: 80 EGPIVLSRPQDGDSPLSDSPPF-YKPSFSWDTLATTYGHSYRQAPSTMQSAFLEHSVSLY 138
Query: 422 GIDLITA---ALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIA 478
G L+ + AL F L SPG D YH + FS P +
Sbjct: 139 GSPLVPSTEPALDFSLRYSPG---------MDAYHCVKCNKVFSTPHGLEVHVRRSHSGT 189
Query: 479 SASACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKN 538
ACD +T G + LE ++RS +CG+ F+R S
Sbjct: 190 RPFACDICG---------KTFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLL 240
Query: 539 VHGD 542
+H D
Sbjct: 241 IHSD 244
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 30.8 bits (68), Expect = 4.8
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 217 DMDEQQNARESLEDQNLKDQDHLYEEEIGAVGGIDYNDTNQNAQSEQNGSSD 268
++DE+++ E +E + KD+ EEE G D D +++ + E++G +
Sbjct: 209 ELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGE 260
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 30.8 bits (68), Expect = 4.8
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 217 DMDEQQNARESLEDQNLKDQDHLYEEEIGAVGGIDYNDTNQNAQSEQNGSSD 268
++DE+++ E +E + KD+ EEE G D D +++ + E++G +
Sbjct: 209 ELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGE 260
>gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo
sapiens]
Length = 807
Score = 30.8 bits (68), Expect = 4.8
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 23/106 (21%)
Query: 187 VETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQ---------------NARESLEDQ 231
V L + NT T+D +NT VP+ D+ + N S+E Q
Sbjct: 597 VHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQ 656
Query: 232 NLKDQDHLYEEEIGAVGGIDYNDTNQNAQ----SEQNGSSDLLCDL 273
+++ LY EI A+ Y D + S + G +D +C+L
Sbjct: 657 TTEERTQLYHAEIDAL----YKDLTAKGKVLILSSEFGEADAVCNL 698
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,158,561
Number of Sequences: 37866
Number of extensions: 1334386
Number of successful extensions: 3607
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 3560
Number of HSP's gapped (non-prelim): 72
length of query: 745
length of database: 18,247,518
effective HSP length: 110
effective length of query: 635
effective length of database: 14,082,258
effective search space: 8942233830
effective search space used: 8942233830
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.