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Search of human proteins with 34147558
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
(280 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 579 e-166
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 142 2e-34
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 102 3e-22
gi|226498192 atonal homolog 8 [Homo sapiens] 67 1e-11
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 65 9e-11
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 62 4e-10
gi|148922889 scleraxis homolog B [Homo sapiens] 62 7e-10
gi|186972126 scleraxis homolog A [Homo sapiens] 62 7e-10
gi|161484632 nescient helix loop helix 2 [Homo sapiens] 61 1e-09
gi|5031945 nescient helix loop helix 2 [Homo sapiens] 61 1e-09
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 61 1e-09
gi|38455396 neurogenin 1 [Homo sapiens] 60 2e-09
gi|4885075 atonal homolog 1 [Homo sapiens] 60 2e-09
gi|31077092 neurogenin 2 [Homo sapiens] 60 3e-09
gi|4507741 twist [Homo sapiens] 59 6e-09
gi|17981708 twist homolog 2 [Homo sapiens] 59 6e-09
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 58 1e-08
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 58 1e-08
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa... 58 1e-08
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 57 1e-08
gi|239749439 PREDICTED: similar to transcription factor 23 [Homo... 56 4e-08
gi|239743573 PREDICTED: similar to transcription factor 23 [Homo... 56 4e-08
gi|68989258 neurogenin 3 [Homo sapiens] 55 5e-08
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 55 5e-08
gi|9945318 MAX binding protein [Homo sapiens] 55 7e-08
gi|239754900 PREDICTED: similar to transcription factor 23 [Homo... 55 9e-08
gi|21553337 atonal homolog 7 [Homo sapiens] 55 9e-08
gi|4758506 basic helix-loop-helix transcription factor HAND1 [Ho... 53 3e-07
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 53 3e-07
gi|23111009 myogenic differentiation 1 [Homo sapiens] 52 4e-07
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 579 bits (1493), Expect = e-166
Identities = 280/280 (100%), Positives = 280/280 (100%)
Query: 1 MCPPQAQAEVGPTMTEKAEMVCAPSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPPGV 60
MCPPQAQAEVGPTMTEKAEMVCAPSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPPGV
Sbjct: 1 MCPPQAQAEVGPTMTEKAEMVCAPSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPPGV 60
Query: 61 PVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGP 120
PVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGP
Sbjct: 61 PVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGP 120
Query: 121 FSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTH 180
FSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTH
Sbjct: 121 FSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTH 180
Query: 181 PPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSG 240
PPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSG
Sbjct: 181 PPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSG 240
Query: 241 RRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR 280
RRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR
Sbjct: 241 RRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR 280
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 142 bits (359), Expect = 2e-34
Identities = 119/305 (39%), Positives = 143/305 (46%), Gaps = 48/305 (15%)
Query: 3 PPQAQAEVGPTMT--EKAEMVCAPSP-----APAPPPKPASPGPPQVEEVGHRGGSSPPR 55
PP A P + + AE AP A A+ P V E+G RGG P
Sbjct: 5 PPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGG--PGG 62
Query: 56 LPPG---------------------VPVISLGHSRPPGVA-MPTTELGTLRPP----LLQ 89
P G VP L RPPG A P T P ++Q
Sbjct: 63 GPAGGGGAARDLKGRDAATAEARHRVPTTEL--CRPPGPAPAPAPASVTAELPGDGRMVQ 120
Query: 90 LSTLGTAPPTL---ALHY---HPHPFLNSVYIGPAGPFSIFPSS-RLKRRPSHCELDLAE 142
LS A P AL Y P L S + G F +F ++ R+KRRPS E+++ +
Sbjct: 121 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD 180
Query: 143 GHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFL 202
G KV RR+FTNSRERWRQQNVNGAFAELRKL+PTHPPD+KLSKNE+LRLAMKYI FL
Sbjct: 181 GPHT-KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFL 239
Query: 203 VRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPG 262
+LL DQ G K PV G G G + + +P + S
Sbjct: 240 AKLLNDQE---EEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLD 296
Query: 263 GAARP 267
GAA P
Sbjct: 297 GAASP 301
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 102 bits (255), Expect = 3e-22
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 16/102 (15%)
Query: 149 VARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRD 208
+ R++FTN+RERWRQQNVN AFA+LRKL+PTHPPD+KLSKNE LRLAM+YI FLV++L +
Sbjct: 1 MTRKIFTNTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGE 60
Query: 209 QA---AALAA----------GPTPPGPRKRPV---HRVPDDG 234
Q+ +AA GP PG R + ++VP G
Sbjct: 61 QSLQQTGVAAQGNILGLFPQGPHLPGLEDRTLLENYQVPSPG 102
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 67.4 bits (163), Expect = 1e-11
Identities = 58/186 (31%), Positives = 76/186 (40%), Gaps = 26/186 (13%)
Query: 24 PSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVAMPTTELGTL 83
P+P P PPP P S P E R PR+ P S PP
Sbjct: 122 PTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPA----------- 170
Query: 84 RPPLLQLSTLGTAPPTL----ALHYHPHPFLNSVYIGPAGPFSIFPSSRLKRRPSHCELD 139
PP ST+ APPT + H N+ A P ++RP
Sbjct: 171 -PPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASP---------RKRPGEATAA 220
Query: 140 LAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYI 199
+E Q+ RR+ N+RER R ++ AF LRK +P + +KLSK +LR+A YI
Sbjct: 221 SSEIKALQQT-RRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYI 279
Query: 200 GFLVRL 205
L RL
Sbjct: 280 LSLARL 285
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 64.7 bits (156), Expect = 9e-11
Identities = 48/109 (44%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 149 VARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFL--VRLL 206
V +R N+RER R Q+VN AF LR L+PT P DRKLSK E LRLA YI L V LL
Sbjct: 71 VRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLL 130
Query: 207 RD---------QAAALAAGPTPP----GPRKRPVHRVPDDGARRGSGRR 242
D +AA A G P G + R + R+G GRR
Sbjct: 131 GDSADDGQPCFRAAGSAKGAVPAAADGGRQPRSICTFCLSNQRKGGGRR 179
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 62.4 bits (150), Expect = 4e-10
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 146 PQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRL 205
P+ V RR N +ER R Q++N AFAELR+ +P P D KLSK + LRLA YI +L+ L
Sbjct: 95 PRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDL 154
Query: 206 L 206
L
Sbjct: 155 L 155
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 61.6 bits (148), Expect = 7e-10
Identities = 48/126 (38%), Positives = 56/126 (44%), Gaps = 18/126 (14%)
Query: 143 GHQPQKVARRVFT-NSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGF 201
G +P + R+ T N+RER R +VN AF LR L+PT P DRKLSK E LRLA YI
Sbjct: 67 GGRPGREPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISH 126
Query: 202 LVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSP 261
L +L A A G P G A A S P PP P
Sbjct: 127 LGNVL---LAGEACGDGQP--------------CHSGPAFFHAARAGSPPPPPPPPPARD 169
Query: 262 GGAARP 267
G +P
Sbjct: 170 GENTQP 175
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 61.6 bits (148), Expect = 7e-10
Identities = 48/126 (38%), Positives = 56/126 (44%), Gaps = 18/126 (14%)
Query: 143 GHQPQKVARRVFT-NSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGF 201
G +P + R+ T N+RER R +VN AF LR L+PT P DRKLSK E LRLA YI
Sbjct: 67 GGRPGREPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISH 126
Query: 202 LVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSP 261
L +L A A G P G A A S P PP P
Sbjct: 127 LGNVL---LAGEACGDGQP--------------CHSGPAFFHAARAGSPPPPPPPPPARD 169
Query: 262 GGAARP 267
G +P
Sbjct: 170 GENTQP 175
>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 61.2 bits (147), Expect = 1e-09
Identities = 32/50 (64%), Positives = 39/50 (78%)
Query: 157 SRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLL 206
+RER R + N AFAELRKLLPT PPD+KLSK E+LRLA+ YI +L +L
Sbjct: 84 TRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 61.2 bits (147), Expect = 1e-09
Identities = 32/50 (64%), Positives = 39/50 (78%)
Query: 157 SRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLL 206
+RER R + N AFAELRKLLPT PPD+KLSK E+LRLA+ YI +L +L
Sbjct: 84 TRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 61.2 bits (147), Expect = 1e-09
Identities = 32/50 (64%), Positives = 39/50 (78%)
Query: 157 SRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLL 206
+RER R + N AFAELRKLLPT PPD+KLSK E+LRLA+ YI +L +L
Sbjct: 82 TRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 131
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 60.5 bits (145), Expect = 2e-09
Identities = 50/129 (38%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 150 ARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQ 209
+RRV N RER R N+N A LR +LP+ P D KL+K E LR A YI L LR
Sbjct: 92 SRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLA 151
Query: 210 AAALAAGPTPPGPRKR--PVHRVP---------DDGARRGSGRRAEAAARSQPAPPADPD 258
L G G R+R P VP D GSG AAA S + P+ P
Sbjct: 152 DQGLPGG----GARERLLPPQCVPCLPGPPSPASDAESWGSG----AAAASPLSDPSSPA 203
Query: 259 GSPGGAARP 267
S RP
Sbjct: 204 ASEDFTYRP 212
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 60.5 bits (145), Expect = 2e-09
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 151 RRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQA 210
RR+ N+RER R +N AF +LR ++P+ D+KLSK E L++A YI L LL+ +
Sbjct: 160 RRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELLQTPS 219
Query: 211 AALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPG 262
P PP K H + + G A AA Q + + PG
Sbjct: 220 GG-EQPPPPPASCKSDHHHLRTAASYEGGAGNATAAGAQQASGGSQRPTPPG 270
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 59.7 bits (143), Expect = 3e-09
Identities = 38/83 (45%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 130 KRRPSHCEL-----DLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDR 184
KRRPS AE Q K RR+ N+RER R N+N A LR++LPT P D
Sbjct: 87 KRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDA 146
Query: 185 KLSKNEVLRLAMKYIGFLVRLLR 207
KL+K E LR A YI L LR
Sbjct: 147 KLTKIETLRFAHNYIWALTETLR 169
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 58.5 bits (140), Expect = 6e-09
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 151 RRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLR 207
+RV N RER R Q++N AFA LRK++PT P D KLSK + L+LA +YI FL ++L+
Sbjct: 109 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQ 164
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 58.5 bits (140), Expect = 6e-09
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 150 ARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLR 207
++R+ N RER R Q++N AFA LRK++PT P D KLSK + L+LA +YI FL ++L+
Sbjct: 66 SQRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQ 122
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 57.8 bits (138), Expect = 1e-08
Identities = 70/251 (27%), Positives = 95/251 (37%), Gaps = 39/251 (15%)
Query: 34 PASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVAMPTTELGTLRPP----LLQ 89
P PG P+ E G PR R P +LG + PP L
Sbjct: 84 PGQPGDPEGREDQGPGAGVAPRGTMNNNFCRALVDRRPLGPPSCMQLGVMPPPRQAPLPP 143
Query: 90 LSTLGTAPPTLALHYHPHPFLNSVYIGPAG--PFSIFPSS-RLKRRPSHCELDLAEGHQP 146
LG P L +P P Y AG P+ FP + + P +P
Sbjct: 144 AEPLGNVPFLL----YPGPAEPPYYDAYAGVFPYVPFPGAFGVYEYP----------FEP 189
Query: 147 QKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLL 206
+ +R N RER R + VN +A LR LP +++LSK E LR A++YI +L LL
Sbjct: 190 AFIQKR---NERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELL 246
Query: 207 RDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPGGAAR 266
++ G TPP R P G+G A +P P D + +
Sbjct: 247 ----SSAPDGSTPPASRGLP-----------GTGPCPAPPATPRPDRPGDGEARAPSSLV 291
Query: 267 PIKMEQTALSP 277
P E + SP
Sbjct: 292 PESSESSCFSP 302
>gi|239747548 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 57.8 bits (138), Expect = 1e-08
Identities = 70/251 (27%), Positives = 95/251 (37%), Gaps = 39/251 (15%)
Query: 34 PASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVAMPTTELGTLRPP----LLQ 89
P PG P+ E G PR R P +LG + PP L
Sbjct: 84 PGQPGDPEGREDQGPGAGVAPRGTMNNNFCRALVDRRPLGPPSCMQLGVMPPPRQAPLPP 143
Query: 90 LSTLGTAPPTLALHYHPHPFLNSVYIGPAG--PFSIFPSS-RLKRRPSHCELDLAEGHQP 146
LG P L +P P Y AG P+ FP + + P +P
Sbjct: 144 AEPLGNVPFLL----YPGPAEPPYYDAYAGVFPYVPFPGAFGVYEYP----------FEP 189
Query: 147 QKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLL 206
+ +R N RER R + VN +A LR LP +++LSK E LR A++YI +L LL
Sbjct: 190 AFIQKR---NERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELL 246
Query: 207 RDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPGGAAR 266
++ G TPP R P G+G A +P P D + +
Sbjct: 247 ----SSAPDGSTPPASRGLP-----------GTGPCPAPPATPRPDRPGDGEARAPSSLV 291
Query: 267 PIKMEQTALSP 277
P E + SP
Sbjct: 292 PESSESSCFSP 302
>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
sapiens]
Length = 313
Score = 57.8 bits (138), Expect = 1e-08
Identities = 70/251 (27%), Positives = 95/251 (37%), Gaps = 39/251 (15%)
Query: 34 PASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVAMPTTELGTLRPP----LLQ 89
P PG P+ E G PR R P +LG + PP L
Sbjct: 84 PGQPGDPEGREDQGPGAGVAPRGTMNNNFCRALVDRRPLGPPSCMQLGVMPPPRQAPLPP 143
Query: 90 LSTLGTAPPTLALHYHPHPFLNSVYIGPAG--PFSIFPSS-RLKRRPSHCELDLAEGHQP 146
LG P L +P P Y AG P+ FP + + P +P
Sbjct: 144 AEPLGNVPFLL----YPGPAEPPYYDAYAGVFPYVPFPGAFGVYEYP----------FEP 189
Query: 147 QKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLL 206
+ +R N RER R + VN +A LR LP +++LSK E LR A++YI +L LL
Sbjct: 190 AFIQKR---NERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELL 246
Query: 207 RDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPGGAAR 266
++ G TPP R P G+G A +P P D + +
Sbjct: 247 ----SSAPDGSTPPASRGLP-----------GTGPCPAPPATPRPDRPGDGEARAPSSLV 291
Query: 267 PIKMEQTALSP 277
P E + SP
Sbjct: 292 PESSESSCFSP 302
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 57.4 bits (137), Expect = 1e-08
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 117 PAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKL 176
PA + P +RRP G + + RR+ +N RER R +N AF LR++
Sbjct: 45 PARAAARAPGEGRRRRPGPSG---PGGRRDSSIQRRLESNERERQRMHKLNNAFQALREV 101
Query: 177 LPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPR 223
+P D+KLSK E L LA YI L + +++ G PGP+
Sbjct: 102 IPHVRADKKLSKIETLTLAKNYIKSLTATILTMSSSRLPGLEGPGPK 148
>gi|239749439 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 55.8 bits (133), Expect = 4e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Query: 157 SRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALA 214
+RER R Q + AF EL++ LP+ PPD KLSK +VL LA YI L R L+D A A A
Sbjct: 56 ARERSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDAEAPA 113
>gi|239743573 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 55.8 bits (133), Expect = 4e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Query: 157 SRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALA 214
+RER R Q + AF EL++ LP+ PPD KLSK +VL LA YI L R L+D A A A
Sbjct: 56 ARERSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDAEAPA 113
>gi|68989258 neurogenin 3 [Homo sapiens]
Length = 214
Score = 55.5 bits (132), Expect = 5e-08
Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 147 QKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLL 206
Q+ +RR N RER R N+N A LR +LPT P D KL+K E LR A YI L + L
Sbjct: 80 QRRSRRKKANDRERNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTL 139
Query: 207 RDQAAALAAGPTPPGP 222
R +L A PP P
Sbjct: 140 RIADHSLYA-LEPPAP 154
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 55.5 bits (132), Expect = 5e-08
Identities = 64/244 (26%), Positives = 88/244 (36%), Gaps = 58/244 (23%)
Query: 28 PAPPPKPASPGPP------QVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVAMPTTELG 81
PAPP P + PP + ++ G G PPG S G S P +A P
Sbjct: 72 PAPPAAPLALAPPSSGGLGEPDDGGGGGYCCETGAPPGGFPYSPG-SPPSCLAYPCAGAA 130
Query: 82 TLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGPFSIFPSSRLKRRPSHCELDLA 141
L P G A ++ +RR E +L
Sbjct: 131 VLSPGARLRGLSGAAA----------------------------AAARRRRRVRSEAELQ 162
Query: 142 EGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGF 201
+ Q N RER R Q++N AF LR +PT P +++LSK + LRLA+ YI F
Sbjct: 163 QLRQA--------ANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINF 214
Query: 202 LVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAAR-------SQPAPP 254
L L++ G G P G R G A + ++ P
Sbjct: 215 LSELVQADLPLRGGGAGGCGG--------PGGGGRLGGDSPGSQAQKVIICHRGTRSPSP 266
Query: 255 ADPD 258
+DPD
Sbjct: 267 SDPD 270
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 55.1 bits (131), Expect = 7e-08
Identities = 60/216 (27%), Positives = 87/216 (40%), Gaps = 32/216 (14%)
Query: 3 PPQAQAEVGPTMTEKAEMVC-APSPAPAPPPKPASP-----GPPQVEEVGHRGGS----- 51
PP A P +V +P P P PPP PA+ P Q VG G S
Sbjct: 76 PPPPLATPAPLTVIPIPVVTNSPQPLPPPPPLPAAAQPLPLAPRQPALVGAPGLSIKEPA 135
Query: 52 ---SPPRLPPGVPVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHP 108
S P++P P++ + P P L L P+L ++ P LA P P
Sbjct: 136 PLPSRPQVPTPAPLLPDSKATIPPNGSP-KPLQPLPTPVLTIAPHPGVQPQLAPQQPPPP 194
Query: 109 FLNSVYIGPAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNG 168
L ++ + PA SS K+RP + R N E+ R+ ++
Sbjct: 195 TLGTLKLAPAEEVK---SSEQKKRPG-------------GIGTREVHNKLEKNRRAHLKE 238
Query: 169 AFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVR 204
F L++ +P + D+K S VLR A++YI L R
Sbjct: 239 CFETLKRNIP-NVDDKKTSNLSVLRTALRYIQSLKR 273
Score = 28.1 bits (61), Expect = 8.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 25 SPAPAPPPKPASPGPPQVEEVGH 47
+P PAPPP PA+P V H
Sbjct: 407 TPLPAPPPPPAAPAQTLVPAPAH 429
>gi|239754900 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 54.7 bits (130), Expect = 9e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 157 SRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALA 214
+RER R Q + AF E+++ LP+ PPD KLSK +VL LA YI L R L+D A A A
Sbjct: 56 ARERSRVQTLRHAFLEVQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDAEAPA 113
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 54.7 bits (130), Expect = 9e-08
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 143 GHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFL 202
G RR+ N+RER R Q +N AF LR+++P D+KLSK E L++A+ YI L
Sbjct: 33 GRLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMAL 92
Query: 203 VRLLRD 208
R+L +
Sbjct: 93 TRILAE 98
>gi|4758506 basic helix-loop-helix transcription factor HAND1 [Homo
sapiens]
Length = 215
Score = 53.1 bits (126), Expect = 3e-07
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 158 RERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQA 210
+ER R +++N AFAELR+ +P P D KLSK + LRLA YI +L+ +L A
Sbjct: 102 KERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDA 154
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 53.1 bits (126), Expect = 3e-07
Identities = 58/166 (34%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 117 PAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKL 176
PA P + S R RRP+ E G VARR N RER R + VN F LR+
Sbjct: 26 PASPELLRCSRR--RRPATAET----GGGAAAVARR---NERERNRVKLVNLGFQALRQH 76
Query: 177 LPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAA---ALAAGPTPPGPRKRPVHRVPDD 233
+P +KLSK E LR A++YI L RLL + A ALA G P R P
Sbjct: 77 VPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSAPRGPPGT 136
Query: 234 GARRGSGRRAEAA----ARSQPAPP----ADPDGSPGGAARPIKME 271
S RA ++ S+P P + D GA P + E
Sbjct: 137 TPVAASPSRASSSPGRGGSSEPGSPRSAYSSDDSGCEGALSPAERE 182
>gi|23111009 myogenic differentiation 1 [Homo sapiens]
Length = 320
Score = 52.4 bits (124), Expect = 4e-07
Identities = 45/125 (36%), Positives = 58/125 (46%), Gaps = 21/125 (16%)
Query: 151 RRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQ- 209
RR RER R VN AF L++ ++P +++L K E+LR A++YI L LLRDQ
Sbjct: 110 RRKAATMRERRRLSKVNEAFETLKRCTSSNP-NQRLPKVEILRNAIRYIEGLQALLRDQD 168
Query: 210 -------AAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAP-PADPDGSP 261
AA A GP PPG G SG ++ RS + D G P
Sbjct: 169 AAPPGAAAAFYAPGPLPPG-----------RGGEHYSGDSDASSPRSNCSDGMMDYSGPP 217
Query: 262 GGAAR 266
GA R
Sbjct: 218 SGARR 222
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,555,754
Number of Sequences: 37866
Number of extensions: 1155460
Number of successful extensions: 20906
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 973
Number of HSP's that attempted gapping in prelim test: 11243
Number of HSP's gapped (non-prelim): 7400
length of query: 280
length of database: 18,247,518
effective HSP length: 101
effective length of query: 179
effective length of database: 14,423,052
effective search space: 2581726308
effective search space used: 2581726308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.