Guide to the Human Genome
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Name: ZNF689 Sequence: fasta or formatted (500aa) NCBI GI: 34147544
Description:

zinc finger protein HIT-39

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         35           2
 C cysteine            6.6         33           1
 D aspartate           3.0         15           2
 E glutamate           5.2         26           2
 F phenylalanine       3.2         16           1
 G glycine             7.0         35           2
 H histidine           6.0         30           1
 I isoleucine          1.8          9           1
 K lysine              5.4         27           2
 L leucine             7.2         36           2
 M methionine          0.4          2           1
 N asparagine          1.6          8           1
 P proline             9.6         48           2
 Q glutamine           4.6         23           1
 R arginine           12.6         63           2
 S serine              8.0         40           4
 T threonine           4.0         20           2
 V valine              2.8         14           1
 W tryptophan          1.0          5           1
 Y tyrosine            3.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein HIT-39 
ZNF785                0.349   zinc finger protein 785 
ZNF250                0.349   zinc finger protein 250 isoform b 
ZNF250                0.349   zinc finger protein 250 isoform a 
ZNF436                0.346   zinc finger protein 436 
ZNF436                0.346   zinc finger protein 436 
ZNF420                0.340   zinc finger protein 420 
ZNF737                0.338   zinc finger protein 737 
ZNF737                0.338   PREDICTED: zinc finger protein 737 
ZNF737                0.338   PREDICTED: zinc finger protein 737 
ZNF737                0.338   PREDICTED: zinc finger protein 737 
ZNF726                0.336   PREDICTED: zinc finger protein 726 
ZNF726                0.336   PREDICTED: zinc finger protein 726 
ZNF726                0.336   PREDICTED: zinc finger protein 726 
ZNF708                0.334   zinc finger protein 708 
ZNF135                0.334   zinc finger protein 135 
ZNF665                0.329   zinc finger protein 665 
ZNF189                0.329   zinc finger protein 189 isoform 1 
ZNF160                0.327   zinc finger protein 160 
ZNF160                0.327   zinc finger protein 160 
ZNF160                0.327   zinc finger protein 160 
ZSCAN2                0.326   zinc finger protein 29 isoform 1 
LOC100287429          0.324   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.324   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.324   PREDICTED: hypothetical protein XP_002343927 isofor...
PRDM9                 0.324   PR domain containing 9 
ZNF300                0.324   zinc finger protein 300 
ZNF84                 0.324   zinc finger protein 84 
ZNF84                 0.324   zinc finger protein 84 
ZNF79                 0.322   zinc finger protein 79 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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