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Search of human proteins with 34147498
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34147498 transmembrane protein 70 isoform a [Homo sapiens]
(260 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34147498 transmembrane protein 70 isoform a [Homo sapiens] 527 e-150
gi|95007020 transmembrane protein 70 isoform b [Homo sapiens] 218 5e-57
gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo sa... 33 0.33
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 33 0.33
gi|4758156 diacylglycerol kinase, iota [Homo sapiens] 32 0.42
gi|239742747 PREDICTED: hypothetical protein XP_002342617 [Homo ... 31 0.95
gi|239755085 PREDICTED: hypothetical protein [Homo sapiens] 31 1.2
gi|169176429 PREDICTED: hypothetical protein [Homo sapiens] 31 1.2
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 30 2.1
gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens] 30 2.8
gi|148368962 NKF3 kinase family member [Homo sapiens] 30 2.8
gi|59709427 XK, Kell blood group complex subunit-related family,... 30 2.8
gi|41872577 raft-linking protein [Homo sapiens] 30 2.8
gi|222831660 family with sequence similarity 171, member A2 [Hom... 29 3.6
gi|12707580 paired-like homeobox 2b [Homo sapiens] 29 3.6
gi|239757322 PREDICTED: hypothetical protein [Homo sapiens] 29 4.7
gi|239751829 PREDICTED: hypothetical protein [Homo sapiens] 29 4.7
gi|239746320 PREDICTED: hypothetical protein XP_002343695 [Homo ... 29 4.7
gi|5031805 insulin receptor substrate 1 [Homo sapiens] 28 6.1
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 28 6.1
gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo ... 28 6.1
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 28 6.1
gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo ... 28 6.1
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 28 6.1
gi|167736355 mucin 4 isoform a [Homo sapiens] 28 6.1
gi|13899251 component of golgi transport complex 3 [Homo sapiens] 28 6.1
gi|32479527 potassium voltage-gated channel, KQT-like subfamily,... 28 8.0
gi|169211258 PREDICTED: similar to hCG2036610 [Homo sapiens] 28 8.0
gi|169211651 PREDICTED: similar to protein phosphatase 1, regula... 28 8.0
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 28 8.0
>gi|34147498 transmembrane protein 70 isoform a [Homo sapiens]
Length = 260
Score = 527 bits (1358), Expect = e-150
Identities = 260/260 (100%), Positives = 260/260 (100%)
Query: 1 MLFLALGSPWAVELPLCGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAA 60
MLFLALGSPWAVELPLCGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAA
Sbjct: 1 MLFLALGSPWAVELPLCGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAA 60
Query: 61 RLLRRPGRAQIPVYWEGYVRFLNTPSDKSEDGRLIYTGNMARAVFGVKCFSYSTSLIGLT 120
RLLRRPGRAQIPVYWEGYVRFLNTPSDKSEDGRLIYTGNMARAVFGVKCFSYSTSLIGLT
Sbjct: 61 RLLRRPGRAQIPVYWEGYVRFLNTPSDKSEDGRLIYTGNMARAVFGVKCFSYSTSLIGLT 120
Query: 121 FLPYIFTQNNAISESVPLPIQIIFYGIMGSFTVITPVLLHFITKGYVIRLYHEATTDTYK 180
FLPYIFTQNNAISESVPLPIQIIFYGIMGSFTVITPVLLHFITKGYVIRLYHEATTDTYK
Sbjct: 121 FLPYIFTQNNAISESVPLPIQIIFYGIMGSFTVITPVLLHFITKGYVIRLYHEATTDTYK 180
Query: 181 AITYNAMLAETSTVFHQNDVKIPDAKHVFTTFYAKTKSLLVNPVLFPNREDYIHLMGYDK 240
AITYNAMLAETSTVFHQNDVKIPDAKHVFTTFYAKTKSLLVNPVLFPNREDYIHLMGYDK
Sbjct: 181 AITYNAMLAETSTVFHQNDVKIPDAKHVFTTFYAKTKSLLVNPVLFPNREDYIHLMGYDK 240
Query: 241 EEFILYMEETSEEKRHKDDK 260
EEFILYMEETSEEKRHKDDK
Sbjct: 241 EEFILYMEETSEEKRHKDDK 260
>gi|95007020 transmembrane protein 70 isoform b [Homo sapiens]
Length = 107
Score = 218 bits (554), Expect = 5e-57
Identities = 106/106 (100%), Positives = 106/106 (100%)
Query: 1 MLFLALGSPWAVELPLCGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAA 60
MLFLALGSPWAVELPLCGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAA
Sbjct: 1 MLFLALGSPWAVELPLCGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAA 60
Query: 61 RLLRRPGRAQIPVYWEGYVRFLNTPSDKSEDGRLIYTGNMARAVFG 106
RLLRRPGRAQIPVYWEGYVRFLNTPSDKSEDGRLIYTGNMARAVFG
Sbjct: 61 RLLRRPGRAQIPVYWEGYVRFLNTPSDKSEDGRLIYTGNMARAVFG 106
>gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo
sapiens]
Length = 669
Score = 32.7 bits (73), Expect = 0.33
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 31 GPRASVSRASSSSGPSGPVA--GWSTG-PSGAARLLRRPGRAQIPVYWEGYVRFLNTPSD 87
GP +S S +SSSS P+A GW++G PSG R + +P Y G P+
Sbjct: 185 GPASSSSSSSSSSAADKPLAFSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAE----PTT 240
Query: 88 KSEDGRLIYTGNMARAVFG 106
S G L G+ A+ G
Sbjct: 241 SSPGGHLPSHGSGRGALPG 259
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 32.7 bits (73), Expect = 0.33
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Query: 15 PLCGRRTALCAAAALR------GPRASVSRASSSSGPSGPVAGWSTGPSGAARLLRRPGR 68
PLC R A CA A R GP +R+ GP P+ P G L GR
Sbjct: 37 PLCLRALAFCALAKPRASSLGPGPGELAARSPVLRGPQAPLRPGGWAPDGLKHLWAPTGR 96
Query: 69 AQIP 72
+P
Sbjct: 97 PGVP 100
>gi|4758156 diacylglycerol kinase, iota [Homo sapiens]
Length = 1065
Score = 32.3 bits (72), Expect = 0.42
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 18 GRRTALCAAAALRGP-RASVSRASSSSGPSGPVAGWSTGPSGAA 60
GR L A RGP RA + A++++ P GP +G + PS AA
Sbjct: 5 GRGCHLLPLPAARGPARAPAAAAAAAASPPGPCSGAACAPSAAA 48
>gi|239742747 PREDICTED: hypothetical protein XP_002342617 [Homo
sapiens]
Length = 283
Score = 31.2 bits (69), Expect = 0.95
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 10 WAVELPLCGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAARLLRRP-GR 68
W +E P C RR AA RA + A+ P GP G G L RP R
Sbjct: 202 WHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPAC---QGQDGRRPALGRPRPR 258
Query: 69 AQIPVYWEG 77
V W G
Sbjct: 259 CAPQVAWAG 267
>gi|239755085 PREDICTED: hypothetical protein [Homo sapiens]
Length = 310
Score = 30.8 bits (68), Expect = 1.2
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 17 CGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAARLLRRPGRAQIP 72
C RR L R P+A ++R SS GP+ PVA ST G R L P +++ P
Sbjct: 11 CSRRRPLPD----RRPQAPIARESSQPGPAHPVAPTST--PGPFRFLFNPQQSRGP 60
>gi|169176429 PREDICTED: hypothetical protein [Homo sapiens]
Length = 310
Score = 30.8 bits (68), Expect = 1.2
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 17 CGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAARLLRRPGRAQIP 72
C RR L R P+A ++R SS GP+ PVA ST G R L P +++ P
Sbjct: 11 CSRRRPLPD----RRPQAPIARESSQPGPAHPVAPTST--PGPFRFLFNPQQSRGP 60
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 30.0 bits (66), Expect = 2.1
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 4 LALGSPWAVELPLCGRRTALCAAAALRGPRASVSRASSSSG------PSGPVAGWSTGPS 57
LA GSP P GR +AL A A R S G P P G + GP
Sbjct: 111 LAWGSPQPAPRPAPGRSSALALAGGAAPGVARAQRPGGSGGRSHPGGPGSPRGGGTVGPG 170
Query: 58 GAARLLRRPGRAQ 70
GR Q
Sbjct: 171 DRGPAAADGGRPQ 183
>gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 632
Score = 29.6 bits (65), Expect = 2.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 38 RASSSSGPSGPVAGWSTGPSGAARLLRRPGR 68
R GP GP AG + GPSG + L GR
Sbjct: 132 RGPKREGPRGPRAGGAQGPSGPSELPAAQGR 162
>gi|148368962 NKF3 kinase family member [Homo sapiens]
Length = 1746
Score = 29.6 bits (65), Expect = 2.8
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 12 VELPLCGRRTALCAAAA-----LRGPRASVSRASSSSGPSGPVAGWSTGPSGAARLLRRP 66
+E PLC T + +AA L GP S SSSS P+ PV S P + ++
Sbjct: 467 LEQPLCKPYTVVDVSAAMASEHLEGPVNSPKTKSSSSTPNSPVTSSSLTPGQISAHFQKS 526
Query: 67 GRAQIPVYW 75
+ W
Sbjct: 527 SAIRYQEVW 535
>gi|59709427 XK, Kell blood group complex subunit-related family,
member 4 [Homo sapiens]
Length = 650
Score = 29.6 bits (65), Expect = 2.8
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 10/54 (18%)
Query: 17 CGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAARLLRRPGRAQ 70
C R CA S S+ SG SG VAG G +G+A L R GR Q
Sbjct: 61 CSRCCCCCAG----------SGGSAGSGGSGGVAGPGGGGAGSAALCLRLGREQ 104
>gi|41872577 raft-linking protein [Homo sapiens]
Length = 578
Score = 29.6 bits (65), Expect = 2.8
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 31 GPRASVSRASSSSGPSGPVAGWSTGPSGAARLLRRPGRAQIPVYWE 76
GPR V A S PSG G P G ++ L P + V+ E
Sbjct: 226 GPRGEVPLAKQPSSPSGEGDGGELSPQGVSKTLDGPESNPLEVHEE 271
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 29.3 bits (64), Expect = 3.6
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 15 PLCGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWST---GPSGAARLLRRP 66
P R A + A G A + A S+ GP G G GPSGAA L P
Sbjct: 420 PRSASRPAAEPSGARGGESAGLKGARSAEGPGGLEPGLEEHRRGPSGAAAFLHEP 474
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 29.3 bits (64), Expect = 3.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 18 GRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGP 56
G A AAAA A+ + A + GP GW+ GP
Sbjct: 239 GGAAAAAAAAAAAAAAAAAAAAGGLAAAGGPGQGWAPGP 277
>gi|239757322 PREDICTED: hypothetical protein [Homo sapiens]
Length = 83
Score = 28.9 bits (63), Expect = 4.7
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 20 RTALCA--AAALRGPRASVSRASSSSGPSGPVAGWSTGPSGA 59
R + CA ++A+R A +SRA SS P P A W P+ A
Sbjct: 23 RRSYCALRSSAIRRSWAPISRAHCSSSPRTPGAAWVGPPARA 64
>gi|239751829 PREDICTED: hypothetical protein [Homo sapiens]
Length = 83
Score = 28.9 bits (63), Expect = 4.7
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 20 RTALCA--AAALRGPRASVSRASSSSGPSGPVAGWSTGPSGA 59
R + CA ++A+R A +SRA SS P P A W P+ A
Sbjct: 23 RRSYCALRSSAIRRSWAPISRAHCSSSPRTPGAAWVGPPARA 64
>gi|239746320 PREDICTED: hypothetical protein XP_002343695 [Homo
sapiens]
Length = 83
Score = 28.9 bits (63), Expect = 4.7
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 20 RTALCA--AAALRGPRASVSRASSSSGPSGPVAGWSTGPSGA 59
R + CA ++A+R A +SRA SS P P A W P+ A
Sbjct: 23 RRSYCALRSSAIRRSWAPISRAHCSSSPRTPGAAWVGPPARA 64
>gi|5031805 insulin receptor substrate 1 [Homo sapiens]
Length = 1242
Score = 28.5 bits (62), Expect = 6.1
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 25 AAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAARL 62
AA + PRA+++ ASSSS S TGP GAA L
Sbjct: 1020 AAEEVSLPRATMAAASSSSAASAS----PTGPQGAAEL 1053
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 28.5 bits (62), Expect = 6.1
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 15 PLCGRRTALCAAAALRGPRA--SVSRASSSS------GPSGPVAGWSTGPSGAARLLRRP 66
PL +RT L + + GP A ++ RA S S G +GP A G G R R
Sbjct: 48 PLRAKRTVLSSPSLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTR- 106
Query: 67 GRAQIPVYWEG 77
GR + P G
Sbjct: 107 GRGRFPCAGSG 117
>gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo
sapiens]
Length = 258
Score = 28.5 bits (62), Expect = 6.1
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 25 AAAALRGPRASVSRASSSSGPSGPVA 50
AAAA R P+ S S +SSS G PVA
Sbjct: 74 AAAATRSPQPSSSGSSSSRGGGAPVA 99
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 28.5 bits (62), Expect = 6.1
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 15 PLCGRRTALCAAAALRGPRA--SVSRASSSS------GPSGPVAGWSTGPSGAARLLRRP 66
PL +RT L + + GP A ++ RA S S G +GP A G G R R
Sbjct: 48 PLRAKRTVLSSPSLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTR- 106
Query: 67 GRAQIPVYWEG 77
GR + P G
Sbjct: 107 GRGRFPCAGSG 117
>gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo
sapiens]
Length = 258
Score = 28.5 bits (62), Expect = 6.1
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 25 AAAALRGPRASVSRASSSSGPSGPVA 50
AAAA R P+ S S +SSS G PVA
Sbjct: 74 AAAATRSPQPSSSGSSSSRGGGAPVA 99
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 28.5 bits (62), Expect = 6.1
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 15 PLCGRRTALCAAAALRGPRA--SVSRASSSS------GPSGPVAGWSTGPSGAARLLRRP 66
PL +RT L + + GP A ++ RA S S G +GP A G G R R
Sbjct: 48 PLRAKRTVLSSPSLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTR- 106
Query: 67 GRAQIPVYWEG 77
GR + P G
Sbjct: 107 GRGRFPCAGSG 117
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 28.5 bits (62), Expect = 6.1
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 111 SYSTSLIGLTFLPYIFTQNNAISESVPLPIQIIFYGIMGSFTVITPVLLHFITKGYVIRL 170
+YS S T LP T + + ++ PLP+ G T + ++ G+ L
Sbjct: 2598 TYSASTGQATPLPVTDTSSASTGDTTPLPVTDTSSASTGHATPLPVTNTSSVSTGHATPL 2657
Query: 171 YHEATTDTYKAITYNAMLAETSTVF--HQNDVKIPDAKHVFT 210
+ + + T + + S+V H + + DA VFT
Sbjct: 2658 HVTSPSSASTGHTTPLPVTDASSVSTGHATSLPVTDASSVFT 2699
>gi|13899251 component of golgi transport complex 3 [Homo sapiens]
Length = 828
Score = 28.5 bits (62), Expect = 6.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 180 KAITYNAMLAETSTVFHQNDVKIPDAKHVFTTFYAKTKS 218
K T N + TS + ++ +P+A + FT FY K ++
Sbjct: 264 KTYTVNTLQTLTSQLLKRDPSSVPNADNAFTLFYVKFRA 302
>gi|32479527 potassium voltage-gated channel, KQT-like subfamily,
member 1 isoform 1 [Homo sapiens]
Length = 676
Score = 28.1 bits (61), Expect = 8.0
Identities = 46/184 (25%), Positives = 68/184 (36%), Gaps = 37/184 (20%)
Query: 4 LALGSPWAVEL----PLCGRRTALCAAAALRGPRASVSRASSSSGPS----GPVAGWSTG 55
LA P+++EL P G A A A GP S A+ ++ P GP S
Sbjct: 30 LAKKCPFSLELAEGGPAGGALYAPIAPGA-PGPAPPASPAAPAAPPVASDLGPRPPVSLD 88
Query: 56 PSGAARLLRRPGRAQIPVYWEGYVRFLNTPSDKSEDGRLIYTGNMARAVFGVKCFSYSTS 115
P + RRP A+ V Y FL P+ G KCF Y +
Sbjct: 89 PRVSIYSTRRPVLARTHVQGRVY-NFLERPT-------------------GWKCFVYHFA 128
Query: 116 LIGLTFLPYIFTQNNAISESVPLPIQIIFYGIMGSFTVITPVLLHFITKGYVIRLYHEAT 175
+ + + IF+ + I + L +F+ + VL+ F YV+RL+
Sbjct: 129 VFLIVLVCLIFSVLSTIEQYAALATGTLFW--------MEIVLVVFFGTEYVVRLWSAGC 180
Query: 176 TDTY 179
Y
Sbjct: 181 RSKY 184
>gi|169211258 PREDICTED: similar to hCG2036610 [Homo sapiens]
Length = 387
Score = 28.1 bits (61), Expect = 8.0
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 31 GPRASVSRASSSSGPSGPVAGWSTGPSGAA 60
GPR SVSRA SS GP GP AG G +
Sbjct: 103 GPRTSVSRA-SSPGPGGP-AGQEVNSPGCS 130
>gi|169211651 PREDICTED: similar to protein phosphatase 1,
regulatory (inhibitor) subunit 2 [Homo sapiens]
Length = 387
Score = 28.1 bits (61), Expect = 8.0
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 31 GPRASVSRASSSSGPSGPVAGWSTGPSGAA 60
GPR SVSRA SS GP GP AG G +
Sbjct: 103 GPRTSVSRA-SSPGPGGP-AGQEVNSPGCS 130
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 28.1 bits (61), Expect = 8.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 31 GPRASVSRASSSSGPSGPVAGWSTGPSGAARLLRRPGRAQ 70
GPRA +SS +G AG P G +R RR R +
Sbjct: 441 GPRAPRGGPASSGWHAGSAAGRGWDPGGGSRARRRAARGR 480
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,805,425
Number of Sequences: 37866
Number of extensions: 430391
Number of successful extensions: 1974
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1956
Number of HSP's gapped (non-prelim): 42
length of query: 260
length of database: 18,247,518
effective HSP length: 100
effective length of query: 160
effective length of database: 14,460,918
effective search space: 2313746880
effective search space used: 2313746880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.