Guide to the Human Genome
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Name: TMEM70 Sequence: fasta or formatted (107aa) NCBI GI: 95007020
Description:

transmembrane protein 70 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {260aa} transmembrane protein 70 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.0         15           4
 C cysteine            1.9          2           1
 D aspartate           1.9          2           1
 E glutamate           2.8          3           1
 F phenylalanine       2.8          3           1
 G glycine            12.1         13           1
 H histidine           0.0          0           0
 I isoleucine          1.9          2           1
 K lysine              1.9          2           1
 L leucine            10.3         11           2
 M methionine          1.9          2           1
 N asparagine          1.9          2           1
 P proline             8.4          9           1
 Q glutamine           0.9          1           1
 R arginine           11.2         12           2
 S serine             11.2         12           4
 T threonine           3.7          4           1
 V valine              5.6          6           1
 W tryptophan          2.8          3           1
 Y tyrosine            2.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 70 isoform b 
TMEM70                0.995   transmembrane protein 70 isoform a 
LZTS2                 0.041   leucine zipper, putative tumor suppressor 2 
C17orf96              0.041   hypothetical protein LOC100170841 
DGKI                  0.036   diacylglycerol kinase, iota 
LOC100288901          0.031   PREDICTED: hypothetical protein XP_002342617 
LOC729537             0.031   PREDICTED: hypothetical protein 
LOC729537             0.031   PREDICTED: hypothetical protein 
BBC3                  0.026   BCL2 binding component 3 isoform 1 
LOC651986             0.026   PREDICTED: similar to forkhead box L2 
SGK269                0.026   NKF3 kinase family member 
XKR4                  0.026   XK, Kell blood group complex subunit-related family,...
RFTN1                 0.026   raft-linking protein 
FAM171A2              0.021   family with sequence similarity 171, member A2 [Hom...
PHOX2B                0.021   paired-like homeobox 2b 
LOC100293252          0.021   PREDICTED: hypothetical protein 
LOC100287269          0.021   PREDICTED: hypothetical protein 
LOC100287269          0.021   PREDICTED: hypothetical protein XP_002343695 
IRS1                  0.015   insulin receptor substrate 1 
LOC100293975          0.015   PREDICTED: hypothetical protein 
LOC100291061          0.015   PREDICTED: hypothetical protein XP_002348193 
LOC100290812          0.015   PREDICTED: hypothetical protein XP_002347678 
LOC100287602          0.015   PREDICTED: hypothetical protein XP_002343855 
LOC100288205          0.015   PREDICTED: hypothetical protein XP_002343496 
LOC390760             0.015   PREDICTED: similar to hCG2036610 
LOC390760             0.015   PREDICTED: similar to protein phosphatase 1, regula...
LOC100290372          0.015   PREDICTED: hypothetical protein XP_002346788 
LOC390760             0.015   PREDICTED: similar to hCG2036610 
LOC100288606          0.015   PREDICTED: hypothetical protein XP_002342652 
KIFC2                 0.015   kinesin family member C2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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