Guide to the Human Genome
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Name: TMEM70 Sequence: fasta or formatted (260aa) NCBI GI: 34147498
Description:

transmembrane protein 70 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {107aa} transmembrane protein 70 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         22           4
 C cysteine            1.2          3           1
 D aspartate           3.5          9           2
 E glutamate           5.0         13           2
 F phenylalanine       5.4         14           1
 G glycine             6.9         18           1
 H histidine           2.3          6           1
 I isoleucine          6.2         16           2
 K lysine              4.6         12           1
 L leucine             9.2         24           2
 M methionine          2.3          6           1
 N asparagine          3.1          8           2
 P proline             6.2         16           1
 Q glutamine           1.5          4           1
 R arginine            5.8         15           2
 S serine              8.1         21           4
 T threonine           7.7         20           2
 V valine              6.2         16           1
 W tryptophan          1.2          3           1
 Y tyrosine            5.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 70 isoform a 
TMEM70                0.384   transmembrane protein 70 isoform b 
LZTS2                 0.016   leucine zipper, putative tumor suppressor 2 
C17orf96              0.016   hypothetical protein LOC100170841 
DGKI                  0.014   diacylglycerol kinase, iota 
LOC100288901          0.012   PREDICTED: hypothetical protein XP_002342617 
LOC729537             0.012   PREDICTED: hypothetical protein 
LOC729537             0.012   PREDICTED: hypothetical protein 
BBC3                  0.010   BCL2 binding component 3 isoform 1 
LOC651986             0.010   PREDICTED: similar to forkhead box L2 
SGK269                0.010   NKF3 kinase family member 
XKR4                  0.010   XK, Kell blood group complex subunit-related family,...
RFTN1                 0.010   raft-linking protein 
FAM171A2              0.008   family with sequence similarity 171, member A2 [Hom...
PHOX2B                0.008   paired-like homeobox 2b 
LOC100293252          0.008   PREDICTED: hypothetical protein 
LOC100287269          0.008   PREDICTED: hypothetical protein 
LOC100287269          0.008   PREDICTED: hypothetical protein XP_002343695 
IRS1                  0.006   insulin receptor substrate 1 
LOC100293975          0.006   PREDICTED: hypothetical protein 
LOC100291061          0.006   PREDICTED: hypothetical protein XP_002348193 
LOC100290812          0.006   PREDICTED: hypothetical protein XP_002347678 
LOC100287602          0.006   PREDICTED: hypothetical protein XP_002343855 
LOC100288205          0.006   PREDICTED: hypothetical protein XP_002343496 
MUC4                  0.006   mucin 4 isoform a 
COG3                  0.006   component of golgi transport complex 3 
KCNQ1                 0.006   potassium voltage-gated channel, KQT-like subfamily,...
LOC390760             0.006   PREDICTED: similar to hCG2036610 
LOC390760             0.006   PREDICTED: similar to protein phosphatase 1, regula...
LOC100290372          0.006   PREDICTED: hypothetical protein XP_002346788 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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