Guide to the Human Genome
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Name: BRMS1L Sequence: fasta or formatted (323aa) NCBI GI: 34147416
Description:

breast cancer metastasis-suppressor 1-like

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Mammary Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         11           1
 C cysteine            2.2          7           1
 D aspartate           8.7         28           2
 E glutamate          12.7         41           2
 F phenylalanine       0.9          3           1
 G glycine             3.7         12           1
 H histidine           3.1         10           2
 I isoleucine          5.3         17           1
 K lysine              9.3         30           3
 L leucine             8.4         27           3
 M methionine          2.5          8           1
 N asparagine          2.2          7           1
 P proline             3.7         12           2
 Q glutamine           4.3         14           1
 R arginine            5.9         19           3
 S serine              9.0         29           3
 T threonine           4.6         15           2
 V valine              5.0         16           3
 W tryptophan          1.2          4           1
 Y tyrosine            4.0         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   breast cancer metastasis-suppressor 1-like 
BRMS1                 0.365   breast cancer metastasis suppressor 1 isoform 1 [Hom...
BRMS1                 0.362   breast cancer metastasis suppressor 1 isoform 2 [Hom...
SUDS3                 0.171   suppressor of defective silencing 3 
KIF21A                0.032   kinesin family member 21A 
ROCK1                 0.027   Rho-associated, coiled-coil containing protein kinase...
EEA1                  0.024   early endosome antigen 1, 162kD 
NRD1                  0.024   nardilysin isoform a 
MYH8                  0.024   myosin, heavy chain 8, skeletal muscle, perinatal [...
UBTF                  0.024   upstream binding transcription factor, RNA polymera...
UBTF                  0.024   upstream binding transcription factor, RNA polymera...
UBTF                  0.024   upstream binding transcription factor, RNA polymerase...
TAF7L                 0.024   TATA box binding protein-associated factor, RNA poly...
TNIK                  0.022   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.022   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.022   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.022   TRAF2 and NCK interacting kinase isoform 1 
NRD1                  0.022   nardilysin isoform b 
KIF21B                0.022   kinesin family member 21B 
HTATSF1               0.022   HIV-1 Tat specific factor 1 
HTATSF1               0.022   HIV-1 Tat specific factor 1 
PTMA                  0.022   prothymosin, alpha isoform 2 
MFAP1                 0.022   microfibrillar-associated protein 1 
PTMA                  0.021   prothymosin, alpha isoform 1 
ZIM2                  0.021   zinc finger, imprinted 2 
ZIM2                  0.021   zinc finger, imprinted 2 
ZIM2                  0.021   zinc finger, imprinted 2 
SR140                 0.021   U2-associated SR140 protein 
LOC441454             0.021   PREDICTED: hypothetical protein 
BZRAP1                0.021   peripheral benzodiazepine receptor-associated prote...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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