Guide to the Human Genome
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Name: ZIM2 Sequence: fasta or formatted (527aa) NCBI GI: 226423927
Description:

zinc finger, imprinted 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [527aa] zinc finger, imprinted 2
alt mRNA [527aa] zinc finger, imprinted 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         21           2
 C cysteine            3.8         20           2
 D aspartate           7.0         37           3
 E glutamate           8.3         44           4
 F phenylalanine       3.6         19           1
 G glycine             4.2         22           1
 H histidine           4.9         26           1
 I isoleucine          1.9         10           2
 K lysine              4.7         25           2
 L leucine             7.8         41           2
 M methionine          2.1         11           1
 N asparagine          4.4         23           2
 P proline             5.7         30           2
 Q glutamine           6.1         32           1
 R arginine            8.9         47           2
 S serine              9.5         50           2
 T threonine           4.9         26           1
 V valine              4.2         22           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.6         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, imprinted 2 
ZIM2                  1.000   zinc finger, imprinted 2 
ZIM2                  1.000   zinc finger, imprinted 2 
PEG3                  0.246   paternally expressed 3 isoform 1 
PEG3                  0.246   paternally expressed 3 isoform 2 
PEG3                  0.246   paternally expressed 3 isoform 1 
PEG3                  0.246   paternally expressed 3 isoform 1 
PEG3                  0.236   paternally expressed 3 isoform 3 
ZNF569                0.181   zinc finger protein 569 
ZNF25                 0.179   zinc finger protein 25 
ZNF829                0.173   zinc finger protein 829 
ZNF684                0.171   zinc finger protein 684 
DKFZp686E2433         0.169   hypothetical protein LOC345462 
ZNF250                0.168   zinc finger protein 250 isoform a 
ZNF383                0.167   zinc finger protein 383 
ZNF420                0.167   zinc finger protein 420 
ZNF250                0.166   zinc finger protein 250 isoform b 
ZNF317                0.166   zinc finger protein 317 
LOC729806             0.165   PREDICTED: similar to hCG1725380 
LOC729806             0.165   PREDICTED: similar to hCG1725380 
LOC729806             0.165   PREDICTED: similar to hCG1725380 
ZNF558                0.165   zinc finger protein 558 
ZFP14                 0.165   zinc finger protein 14-like 
ZNF773                0.163   zinc finger protein 773 
ZNF595                0.163   zinc finger protein 595 
ZFP82                 0.162   zinc finger protein 82 homolog 
ZNF419                0.161   zinc finger protein 419 isoform 2 
ZNF419                0.161   zinc finger protein 419 isoform 4 
ZNF419                0.161   zinc finger protein 419 isoform 3 
ZNF419                0.161   zinc finger protein 419 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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