Guide to the Human Genome
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Search of human proteins with 33946280

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo
sapiens]
         (1147 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]   2300   0.0  
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]   2268   0.0  
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    88   5e-17
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa...    69   2e-11
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    69   3e-11
gi|60498973 myelin transcription factor 1-like [Homo sapiens]          67   1e-10
gi|17975763 myelin transcription factor 1 [Homo sapiens]               66   2e-10
gi|38788260 bromodomain PHD finger transcription factor isoform ...    65   3e-10
gi|38788274 bromodomain PHD finger transcription factor isoform ...    65   3e-10
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    65   5e-10
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear...    63   1e-09
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear...    63   1e-09
gi|21361639 DIPB protein [Homo sapiens]                                63   1e-09
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]           62   2e-09
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil...    62   3e-09
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]           62   4e-09
gi|55956788 nucleolin [Homo sapiens]                                   61   7e-09
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil...    61   7e-09
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         60   9e-09
gi|115529449 upstream binding transcription factor, RNA polymera...    60   2e-08
gi|115529451 upstream binding transcription factor, RNA polymera...    60   2e-08
gi|7657671 upstream binding transcription factor, RNA polymerase...    60   2e-08
gi|58761548 tau tubulin kinase 1 [Homo sapiens]                        59   2e-08
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex...    59   3e-08
gi|110349719 titin isoform N2-A [Homo sapiens]                         58   5e-08
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami...    58   5e-08
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam...    58   5e-08
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam...    58   5e-08
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ...    58   6e-08
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]     57   8e-08

>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
          Length = 1147

 Score = 2300 bits (5961), Expect = 0.0
 Identities = 1147/1147 (100%), Positives = 1147/1147 (100%)

Query: 1    MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYG 60
            MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYG
Sbjct: 1    MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYG 60

Query: 61   ETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCL 120
            ETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCL
Sbjct: 61   ETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCL 120

Query: 121  TLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPR 180
            TLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPR
Sbjct: 121  TLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPR 180

Query: 181  GPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEV 240
            GPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEV
Sbjct: 181  GPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEV 240

Query: 241  EEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ 300
            EEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ
Sbjct: 241  EEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ 300

Query: 301  ISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFE 360
            ISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFE
Sbjct: 301  ISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFE 360

Query: 361  IEISRMKDQGPDKENSGAIEASVKLTELLDLYREDRGAKWVTALEEIPSLIIKGLSYLQL 420
            IEISRMKDQGPDKENSGAIEASVKLTELLDLYREDRGAKWVTALEEIPSLIIKGLSYLQL
Sbjct: 361  IEISRMKDQGPDKENSGAIEASVKLTELLDLYREDRGAKWVTALEEIPSLIIKGLSYLQL 420

Query: 421  KNTKQDSLGQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQGVTGLLQA 480
            KNTKQDSLGQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQGVTGLLQA
Sbjct: 421  KNTKQDSLGQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQGVTGLLQA 480

Query: 481  GVISGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRGRQNEKSGYQKLLELILL 540
            GVISGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRGRQNEKSGYQKLLELILL
Sbjct: 481  GVISGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRGRQNEKSGYQKLLELILL 540

Query: 541  DQTVRVVTAGSAILQKCHFYEVLSEIKRLGDHLAEKTSSLPNHSEPDHDTDAGLERTNPE 600
            DQTVRVVTAGSAILQKCHFYEVLSEIKRLGDHLAEKTSSLPNHSEPDHDTDAGLERTNPE
Sbjct: 541  DQTVRVVTAGSAILQKCHFYEVLSEIKRLGDHLAEKTSSLPNHSEPDHDTDAGLERTNPE 600

Query: 601  YENEVEASMDMDLLESSNISEGEIERLINLLEEVFHLMETAPHTMIQQPVKSFPTMARIT 660
            YENEVEASMDMDLLESSNISEGEIERLINLLEEVFHLMETAPHTMIQQPVKSFPTMARIT
Sbjct: 601  YENEVEASMDMDLLESSNISEGEIERLINLLEEVFHLMETAPHTMIQQPVKSFPTMARIT 660

Query: 661  GPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLF 720
            GPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLF
Sbjct: 661  GPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLF 720

Query: 721  FMSEYEATNLLIRALCHFYDQDEEEGLQSDGVIDDAFALWLQDSTQTLQCITELFSHFQR 780
            FMSEYEATNLLIRALCHFYDQDEEEGLQSDGVIDDAFALWLQDSTQTLQCITELFSHFQR
Sbjct: 721  FMSEYEATNLLIRALCHFYDQDEEEGLQSDGVIDDAFALWLQDSTQTLQCITELFSHFQR 780

Query: 781  CTASEETDHSDLLGTLHNLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDS 840
            CTASEETDHSDLLGTLHNLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDS
Sbjct: 781  CTASEETDHSDLLGTLHNLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDS 840

Query: 841  KSKKSVAYNYACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKN 900
            KSKKSVAYNYACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKN
Sbjct: 841  KSKKSVAYNYACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKN 900

Query: 901  LRFEINCIPNLIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAV 960
            LRFEINCIPNLIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAV
Sbjct: 901  LRFEINCIPNLIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAV 960

Query: 961  IQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTEL 1020
            IQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTEL
Sbjct: 961  IQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTEL 1020

Query: 1021 LRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLT 1080
            LRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLT
Sbjct: 1021 LRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLT 1080

Query: 1081 ISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVSLPYNMHLI 1140
            ISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVSLPYNMHLI
Sbjct: 1081 ISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVSLPYNMHLI 1140

Query: 1141 NDCSNTF 1147
            NDCSNTF
Sbjct: 1141 NDCSNTF 1147


>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
          Length = 1812

 Score = 2268 bits (5876), Expect = 0.0
 Identities = 1132/1137 (99%), Positives = 1135/1137 (99%)

Query: 1    MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYG 60
            MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYG
Sbjct: 1    MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYG 60

Query: 61   ETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCL 120
            ETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCL
Sbjct: 61   ETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCL 120

Query: 121  TLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPR 180
            TLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPR
Sbjct: 121  TLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPR 180

Query: 181  GPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEV 240
            GPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEV
Sbjct: 181  GPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEV 240

Query: 241  EEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ 300
            EEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ
Sbjct: 241  EEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ 300

Query: 301  ISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFE 360
            ISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFE
Sbjct: 301  ISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFE 360

Query: 361  IEISRMKDQGPDKENSGAIEASVKLTELLDLYREDRGAKWVTALEEIPSLIIKGLSYLQL 420
            IEISRMKDQGPDKENSGAIEASVKLTELLDLYREDRGAKWVTALEEIPSLIIKGLSYLQL
Sbjct: 361  IEISRMKDQGPDKENSGAIEASVKLTELLDLYREDRGAKWVTALEEIPSLIIKGLSYLQL 420

Query: 421  KNTKQDSLGQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQGVTGLLQA 480
            KNTKQDSLGQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQGVTGLLQA
Sbjct: 421  KNTKQDSLGQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQGVTGLLQA 480

Query: 481  GVISGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRGRQNEKSGYQKLLELILL 540
            GVISGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRGRQNEKSGYQKLLELILL
Sbjct: 481  GVISGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRGRQNEKSGYQKLLELILL 540

Query: 541  DQTVRVVTAGSAILQKCHFYEVLSEIKRLGDHLAEKTSSLPNHSEPDHDTDAGLERTNPE 600
            DQTVRVVTAGSAILQKCHFYEVLSEIKRLGDHLAEKTSSLPNHSEPDHDTDAGLERTNPE
Sbjct: 541  DQTVRVVTAGSAILQKCHFYEVLSEIKRLGDHLAEKTSSLPNHSEPDHDTDAGLERTNPE 600

Query: 601  YENEVEASMDMDLLESSNISEGEIERLINLLEEVFHLMETAPHTMIQQPVKSFPTMARIT 660
            YENEVEASMDMDLLESSNISEGEIERLINLLEEVFHLMETAPHTMIQQPVKSFPTMARIT
Sbjct: 601  YENEVEASMDMDLLESSNISEGEIERLINLLEEVFHLMETAPHTMIQQPVKSFPTMARIT 660

Query: 661  GPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLF 720
            GPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLF
Sbjct: 661  GPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLF 720

Query: 721  FMSEYEATNLLIRALCHFYDQDEEEGLQSDGVIDDAFALWLQDSTQTLQCITELFSHFQR 780
            FMSEYEATNLLIRALCHFYDQDEEEGLQSDGVIDDAFALWLQDSTQTLQCITELFSHFQR
Sbjct: 721  FMSEYEATNLLIRALCHFYDQDEEEGLQSDGVIDDAFALWLQDSTQTLQCITELFSHFQR 780

Query: 781  CTASEETDHSDLLGTLHNLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDS 840
            CTASEETDHSDLLGTLHNLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDS
Sbjct: 781  CTASEETDHSDLLGTLHNLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDS 840

Query: 841  KSKKSVAYNYACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKN 900
            KSKKSVAYNYACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKN
Sbjct: 841  KSKKSVAYNYACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKN 900

Query: 901  LRFEINCIPNLIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAV 960
            LRFEINCIPNLIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAV
Sbjct: 901  LRFEINCIPNLIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAV 960

Query: 961  IQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTEL 1020
            IQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTEL
Sbjct: 961  IQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTEL 1020

Query: 1021 LRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLT 1080
            LRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLT
Sbjct: 1021 LRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLT 1080

Query: 1081 ISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVSLPYNM 1137
            ISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQV  P+++
Sbjct: 1081 ISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVIEPHDI 1137


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 87.8 bits (216), Expect = 5e-17
 Identities = 67/223 (30%), Positives = 96/223 (43%), Gaps = 26/223 (11%)

Query: 127 SVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPR--- 183
           S D V+      PP PPPPP    P P     P  A          SPP P    P    
Sbjct: 784 SDDSVVIVPEGLPPLPPPPPSGATPPPIAPTGPPTA----------SPPVPAKEEPEELP 833

Query: 184 TPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQ------YSDE 237
             PGP PP      PVP PV+    +  P         +P     P   +       +  
Sbjct: 834 AAPGPLPPPPPPPPPVPGPVTLPPPQLVPEG-------TPGGGGPPALEEDLTVININSS 886

Query: 238 GEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDG 297
            E EEE++EE EE+E++ + EE+ +E+E+D        EEEEE+ EEE EE+E    ++ 
Sbjct: 887 DEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEE 946

Query: 298 YEQISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDP 340
            E+   +E+ + ++E   F     +VE  A    ++PP    P
Sbjct: 947 EEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPP 989



 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 43/141 (30%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 162  ADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVP-----LPVSGDKEEDAPHRED 216
            A GE E+   G+PP P       PP  PP    E +P P     +   G +EE       
Sbjct: 968  AGGEVEE---GAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAP 1024

Query: 217  YFEPIS-PDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIP 275
               P + P +  V +EG+    G   +E  EE E       +EEE ++  D  +     P
Sbjct: 1025 TLAPEALPSQGEVEREGESPAAGPPPQELVEE-EPSAPPTLLEEETEDGSDKVQPPPETP 1083

Query: 276  EEEEEDEEEEGEEDEEGEGDD 296
             EEE + E E E  +E E DD
Sbjct: 1084 AEEEMETETEAEALQEKEQDD 1104



 Score = 32.0 bits (71), Expect = 3.5
 Identities = 36/144 (25%), Positives = 49/144 (34%), Gaps = 21/144 (14%)

Query: 140 PPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRG---------PRTPPGPPP 190
           P P P PPP  P P  +  P H  G      +     P P           P   PGPP 
Sbjct: 646 PTPAPVPPPEAPSP-FRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPPT 704

Query: 191 PDDDEDDPVPLPVS-------GDKEEDAPHRED-YFEPISPDRNSVPQEGQYSDEGEVEE 242
             +     VP  VS       G +   A   ED    P      ++P +  +   G V  
Sbjct: 705 TANHLGLSVPGLVSVPPRLLPGPENHRAGSNEDPILAPSGTPPPTIPPDETFG--GRVPR 762

Query: 243 EQ-QEEGEEDEDDVDVEEEEDEDE 265
                  +E+  DV++  E D D+
Sbjct: 763 PAFVHYDKEEASDVEISLESDSDD 786


>gi|84043963 eukaryotic translation initiation factor 5B [Homo
           sapiens]
          Length = 1220

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 38/139 (27%), Positives = 73/139 (52%), Gaps = 3/139 (2%)

Query: 208 EEDAPHREDYFEPISPDRNSVPQEGQYSD-EGEVEEEQQEEGEEDEDDVDVEEEEDEDED 266
           E+  P +E+   P+ P+     ++    D E    +E+ E+ E ++  ++V+E  +E+E+
Sbjct: 477 EQGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEE 536

Query: 267 DRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERETFKYPNFDVEYT 326
           +    +   +EE E+EEEE  E E  EGD+  E++S ++D    L+++  K  + D EY 
Sbjct: 537 EEEEEEE--DEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYD 594

Query: 327 AEDLASVPPMTYDPYDREL 345
           ++D  +     YD   R +
Sbjct: 595 SDDDRTKEERAYDKAKRRI 613



 Score = 54.3 bits (129), Expect = 7e-07
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 179 PRGPRTPPGPPPPDDDED------DPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEG 232
           P    TPP P  P+++ED      D      S ++ E     + + E          +E 
Sbjct: 481 PEKEETPP-PVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEE 539

Query: 233 QYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDE-DDRRTVDSIPEEEEEDEEEEGEEDEE 291
           +  ++ E EEE++EEGE +  + D E+E+  DE D  +T+D  P +E   + E   +D+ 
Sbjct: 540 EEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDR 599

Query: 292 GEGDDGYEQ 300
            + +  Y++
Sbjct: 600 TKEERAYDK 608



 Score = 34.7 bits (78), Expect = 0.53
 Identities = 37/180 (20%), Positives = 75/180 (41%), Gaps = 29/180 (16%)

Query: 158 NPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPV-------SGDKEED 210
           N     G++ D+F  S  + Q +  +  PGP     +EDD     +       +  KE +
Sbjct: 181 NSSGESGDESDEFLQSR-KGQKKNQKNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERE 239

Query: 211 APHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEE--------DEDDVDVEEE-- 260
              R++    +   +     E    D+ + +E Q++  EE        D   +   EE  
Sbjct: 240 RKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKA 299

Query: 261 ------EDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
                 ED++E D++  D   ++ E++E+E  +E ++G        + + ++ +A L+ E
Sbjct: 300 ETPTAAEDDNEGDKKKKDKKKKKGEKEEKE--KEKKKGPSK---ATVKAMQEALAKLKEE 354



 Score = 33.5 bits (75), Expect = 1.2
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)

Query: 230 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEE---EEDEDEDDRRTVDSIPEEEEEDEEEEG 286
           QE Q S   + +E+++++ +ED+   ++EE   E    + DR TV   P   E +EEE  
Sbjct: 35  QEPQKSKGKKKKEKKKQDFDEDDILKELEELSLEAQGIKADRETVAVKP--TENNEEEFT 92

Query: 287 EEDEEGEGDDGYEQISSDED 306
            +D++ +G  G +Q   D D
Sbjct: 93  SKDKKKKGQKGKKQSFDDND 112



 Score = 33.5 bits (75), Expect = 1.2
 Identities = 24/104 (23%), Positives = 55/104 (52%), Gaps = 11/104 (10%)

Query: 220 PISPDRNSVPQEGQYSDEGEVE--EEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEE 277
           P S ++   P   +  +EG+ +  ++++++GE++E     +E+E +    + TV ++ E 
Sbjct: 293 PASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEE-----KEKEKKKGPSKATVKAMQEA 347

Query: 278 ----EEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERETFK 317
               +EE+E ++ EE+E  +  +  E    +E+ +   +RE  K
Sbjct: 348 LAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKK 391



 Score = 32.7 bits (73), Expect = 2.0
 Identities = 51/261 (19%), Positives = 101/261 (38%), Gaps = 37/261 (14%)

Query: 192 DDDEDDPVPLPVSG-----DKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGE---VEEE 243
           DDD+ + +P    G     +K+ D    ++       +R+ +   G+  DE +      +
Sbjct: 139 DDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRK 198

Query: 244 QQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEE----------GE 293
            Q++ ++++   ++E   ++D+   +      ++ E+ E E  + DEE           E
Sbjct: 199 GQKKNQKNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEE 258

Query: 294 GDDGYEQISSDEDGIADLERETFKYP---NFDVEYTAEDLASVPPMTYDPYDRELVPLLY 350
            + G +  S  ++     E ET K     +  V   +E+ A  P    D  + +      
Sbjct: 259 LETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKK-- 316

Query: 351 FSCPYKTTFEIEISRMKDQGPDKENSGAI-EASVKLTELLDLYREDRGAKWVTALEEIPS 409
                K   + E  + K +GP K    A+ EA  KL E  +  + +   +          
Sbjct: 317 -DKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEER---------- 365

Query: 410 LIIKGLSYLQLKNTKQDSLGQ 430
             IK L  L+ K  +++ L Q
Sbjct: 366 --IKRLEELEAKRKEEERLEQ 384



 Score = 31.2 bits (69), Expect = 5.9
 Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 6/138 (4%)

Query: 241 EEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ 300
           EEE++++ EE+E    +EE E + +++ R    + +E+ E ++++ +E +E    +G   
Sbjct: 353 EEEERQKREEEERIKRLEELEAKRKEEER----LEQEKRERKKQKEKERKERLKKEGKLL 408

Query: 301 ISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFE 360
             S  +  A  E          VE  ++D        Y+   R+ +P    S     + E
Sbjct: 409 TKSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQQLESKEVSESME 468

Query: 361 I--EISRMKDQGPDKENS 376
           +   +  M+   P+KE +
Sbjct: 469 LCAAVEVMEQGVPEKEET 486


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
            [Homo sapiens]
          Length = 2073

 Score = 68.9 bits (167), Expect = 3e-11
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 27/189 (14%)

Query: 142  PPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPL 201
            PP  P  P  Q +++   + ++G+       SP R +     T     P +++  +    
Sbjct: 1276 PPETPMEPDEQVTVEEQKETSEGKTSP----SPIRIEEEVKETGEALLPQEENRREETCA 1331

Query: 202  PVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEE 261
            PVS +        +D  +P         +E +  +E E EEE++EEGEE+E   +VE++ 
Sbjct: 1332 PVSPNTSPGEKPEDDLIKP---------EEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDP 1382

Query: 262  D-------------EDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGI 308
            D              +++D   +D   EEEEEDEE    ED + + +D    + S E   
Sbjct: 1383 DGAKSQEKEEPEISTEKEDSARLDDHEEEEEEDEEPSHNEDHDADDEDD-SHMESAEVEK 1441

Query: 309  ADLERETFK 317
             +L RE+FK
Sbjct: 1442 EELPRESFK 1450



 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 8/63 (12%)

Query: 227  SVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEG 286
            S P  G+     E+ +E  EE EE+ED+ + EEEE+E+ED+        EEEEE+EEEE 
Sbjct: 1051 SRPVTGERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDE--------EEEEEEEEEEE 1102

Query: 287  EED 289
            EE+
Sbjct: 1103 EEN 1105



 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 18/115 (15%)

Query: 236  DEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGD 295
            + G++ E  +E  EE+E++ D EEEE+E+E          EEE+E+EEEE EE+EE E  
Sbjct: 1057 ERGQLLELSKESSEEEEEEEDEEEEEEEEE----------EEEDEEEEEEEEEEEEEENI 1106

Query: 296  DGYEQISSDEDGIADLERETF--------KYPNFDVEYTAEDLASVPPMTYDPYD 342
                   +    +A   +  F        K    +   T E ++    +  +P+D
Sbjct: 1107 QSSPPRLTKPQSVAIKRKRPFVLKKKRGRKRRRINSSVTTETISETTEVLNEPFD 1161



 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 14/66 (21%)

Query: 220  PISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEE 279
            P++ +R  + +  + S E E EEE +EE EE+E     EEEEDE+E+         EEEE
Sbjct: 1053 PVTGERGQLLELSKESSEEEEEEEDEEEEEEEE-----EEEEDEEEE---------EEEE 1098

Query: 280  EDEEEE 285
            E+EEEE
Sbjct: 1099 EEEEEE 1104



 Score = 33.5 bits (75), Expect = 1.2
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)

Query: 198  PVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDV 257
            P   PV+G+       R    E          +E    +E E EEE+++E EE+E++ + 
Sbjct: 1049 PESRPVTGE-------RGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEE 1101

Query: 258  EEEEDEDEDDRRT 270
            EEE  +    R T
Sbjct: 1102 EEENIQSSPPRLT 1114


>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
          Length = 1184

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 18/165 (10%)

Query: 176 RPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHRE-DYFEPISPDRNSVPQEGQY 234
           +PQ   P+  P     D    D        D  ED   +E D  E  S D +    E + 
Sbjct: 67  QPQEPAPKRKPFAVKADSSSVDECD---DSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEE 123

Query: 235 SDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEG 294
            +EG+ EEE++ E E+++DD D E+ EDE+E          EEEEE+EEEE EE+E+ + 
Sbjct: 124 DEEGDREEEEEIEEEDEDDDEDGEDVEDEEE----------EEEEEEEEEEEEENEDHQM 173

Query: 295 DDGYEQISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYD 339
           +    +I  D +     +    +Y N+D E  A+ L ++  +  D
Sbjct: 174 NCHNTRIMQDTE---KDDNNNDEYDNYD-ELVAKSLLNLGKIAED 214



 Score = 37.0 bits (84), Expect = 0.11
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 12/104 (11%)

Query: 211 APHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRT 270
           A HR  Y  P++  R +  ++ Q        + +    + D   VD  ++ D  ED    
Sbjct: 47  ARHRSVYGCPLAKKRKTQDKQPQEP----APKRKPFAVKADSSSVDECDDSDGTED---- 98

Query: 271 VDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
                +E+EEDE EE  ED +  GD+  E    D +   ++E E
Sbjct: 99  ----MDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEE 138


>gi|17975763 myelin transcription factor 1 [Homo sapiens]
          Length = 1121

 Score = 66.2 bits (160), Expect = 2e-10
 Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 6/77 (7%)

Query: 227 SVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEG 286
           S  Q+G  S E E EEE++EE EE+ED+ + EEEE+E+E++        EEEEE+EEEE 
Sbjct: 248 SSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEE------EEEEEEEEEEE 301

Query: 287 EEDEEGEGDDGYEQISS 303
           EE+EE   D  +++ +S
Sbjct: 302 EEEEEAAPDVIFQEDTS 318



 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 11/82 (13%)

Query: 233 QYSDEGEVEEEQQEEG---EEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED 289
           Q  ++   EE  +++G    E+ED+ + EEEE+E+ED+        EEEEE+EEEE EE+
Sbjct: 238 QSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDE--------EEEEEEEEEEEEEE 289

Query: 290 EEGEGDDGYEQISSDEDGIADL 311
           EE E ++  E+   +E+   D+
Sbjct: 290 EEEEEEEEEEEEEEEEEAAPDV 311



 Score = 45.1 bits (105), Expect = 4e-04
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 8/92 (8%)

Query: 231 EGQYSDEGE----VEEEQQEE----GEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDE 282
           EG  S+EGE    ++ E  EE      E   D+  +  ED   ++      I   EEEDE
Sbjct: 203 EGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDE 262

Query: 283 EEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
           EEE EE+EE E ++  E+   +E+   + E E
Sbjct: 263 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEE 294



 Score = 40.0 bits (92), Expect = 0.013
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%)

Query: 213 HREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVD 272
           H E+  E    +      E +  +E E EEE++EE EE+E++ + EEEE+   D     D
Sbjct: 257 HEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQED 316

Query: 273 SIPEEEEEDEEEEGEEDEEGEGD-DGYEQISSDED 306
           +     ++  E  G E    + +     ++ SD+D
Sbjct: 317 TSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDD 351



 Score = 38.9 bits (89), Expect = 0.028
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 206 DKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDE 265
           + EE+    E+  E    +     +E +  +E E EEE++EE EE+E   DV  +ED   
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSH 319

Query: 266 DDRRTVDSI-------PEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADL 311
              +    +       P+ E     E   +D++ E     +   +DE  + D+
Sbjct: 320 TSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDESEMQDM 372



 Score = 37.4 bits (85), Expect = 0.082
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 11/110 (10%)

Query: 233 QYSDEGEVEEEQQE----EGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEE-------D 281
           Q + EG   EE ++    + E+ E+ V+V  E  +D   +   D+  EE  +       +
Sbjct: 199 QEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHE 258

Query: 282 EEEEGEEDEEGEGDDGYEQISSDEDGIADLERETFKYPNFDVEYTAEDLA 331
           EE+E EE+EE E ++  E+   +E+   + E E  +    + E   E+ A
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA 308


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
           [Homo sapiens]
          Length = 2903

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 20/174 (11%)

Query: 135 DRDSPPPPPPPPPPPQ-PQPSLKRNPK--------HADGEKEDQFNGSPPRPQPRGPRTP 185
           +R +P PPPPPPPP   P   L+   +         A  E   +   S PR      R P
Sbjct: 18  ERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKP 77

Query: 186 PGPPPPDDDEDDP-VPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQ 244
           P PPP       P       G           +    +  R +V +         V ++ 
Sbjct: 78  PPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNK--------VVYDDH 129

Query: 245 QEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED--EEGEGDD 296
           + E EE+E+D+  EEEE+ED D   T DS  +EE+E EE++ + D  EE E DD
Sbjct: 130 ESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDD 183



 Score = 42.4 bits (98), Expect = 0.003
 Identities = 51/202 (25%), Positives = 66/202 (32%), Gaps = 58/202 (28%)

Query: 140 PPPPPPPPPPQPQPSLKRNPKH----------ADGEKEDQFNGSPPRPQPRGPRTPPGPP 189
           P PPPPPPPP   P      +H          A  E   +   S PR      R PP PP
Sbjct: 22  PAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKPP-PP 80

Query: 190 PPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGE 249
           PP                              +P   S P  G     G         G 
Sbjct: 81  PP------------------------------APPSTSAPGRGGRGGGGGRTGGGGGGGH 110

Query: 250 EDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED---EEGEGDDGYEQISSDED 306
                             RR V+ +  ++ E EEEE EED   EE E +DG  + + D +
Sbjct: 111 LARTTAA-----------RRAVNKVVYDDHESEEEEEEEDMVSEEEEEEDGDAEETQDSE 159

Query: 307 GIADLERETFKYPNFDVEYTAE 328
              D E +  +  + D +Y  E
Sbjct: 160 ---DDEEDEMEEDDDDSDYPEE 178



 Score = 37.0 bits (84), Expect = 0.11
 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 230 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED 289
           ++G   +    EE ++++ E + D  D E+  +E ED     DS  ++  +D+ E+G+ +
Sbjct: 563 KKGDIDNVKSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDS-DDKTPDDDPEQGKSE 621

Query: 290 EEGEGDDGYEQISSD 304
           E  E  D    +S++
Sbjct: 622 EPTEVGDKGNSVSAN 636



 Score = 31.2 bits (69), Expect = 5.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 138  SPPPPPPPPPPPQPQPSLK 156
            +PP PP PPP P P P+++
Sbjct: 2659 APPAPPAPPPSPPPPPAVQ 2677



 Score = 30.8 bits (68), Expect = 7.7
 Identities = 17/71 (23%), Positives = 38/71 (53%)

Query: 235 SDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEG 294
           ++E  +E  + ++G+ D      E E+D++E +  + D+    EE +++   ++ ++   
Sbjct: 552 ANEEILESIRAKKGDIDNVKSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTP 611

Query: 295 DDGYEQISSDE 305
           DD  EQ  S+E
Sbjct: 612 DDDPEQGKSEE 622


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
           [Homo sapiens]
          Length = 2920

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 20/174 (11%)

Query: 135 DRDSPPPPPPPPPPPQ-PQPSLKRNPK--------HADGEKEDQFNGSPPRPQPRGPRTP 185
           +R +P PPPPPPPP   P   L+   +         A  E   +   S PR      R P
Sbjct: 18  ERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKP 77

Query: 186 PGPPPPDDDEDDP-VPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQ 244
           P PPP       P       G           +    +  R +V +         V ++ 
Sbjct: 78  PPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNK--------VVYDDH 129

Query: 245 QEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED--EEGEGDD 296
           + E EE+E+D+  EEEE+ED D   T DS  +EE+E EE++ + D  EE E DD
Sbjct: 130 ESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDD 183



 Score = 42.4 bits (98), Expect = 0.003
 Identities = 51/202 (25%), Positives = 66/202 (32%), Gaps = 58/202 (28%)

Query: 140 PPPPPPPPPPQPQPSLKRNPKH----------ADGEKEDQFNGSPPRPQPRGPRTPPGPP 189
           P PPPPPPPP   P      +H          A  E   +   S PR      R PP PP
Sbjct: 22  PAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKPP-PP 80

Query: 190 PPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGE 249
           PP                              +P   S P  G     G         G 
Sbjct: 81  PP------------------------------APPSTSAPGRGGRGGGGGRTGGGGGGGH 110

Query: 250 EDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED---EEGEGDDGYEQISSDED 306
                             RR V+ +  ++ E EEEE EED   EE E +DG  + + D +
Sbjct: 111 LARTTAA-----------RRAVNKVVYDDHESEEEEEEEDMVSEEEEEEDGDAEETQDSE 159

Query: 307 GIADLERETFKYPNFDVEYTAE 328
              D E +  +  + D +Y  E
Sbjct: 160 ---DDEEDEMEEDDDDSDYPEE 178



 Score = 32.0 bits (71), Expect = 3.5
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 230 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED 289
           ++G   +    EE ++++ E + D  D E+  +E ED     DS  ++  +D+ E+G+ +
Sbjct: 563 KKGDIDNVKSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDS-DDKTPDDDPEQGKSE 621



 Score = 31.2 bits (69), Expect = 5.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 138  SPPPPPPPPPPPQPQPSLK 156
            +PP PP PPP P P P+++
Sbjct: 2676 APPAPPAPPPSPPPPPAVQ 2694


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score = 64.7 bits (156), Expect = 5e-10
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 3/156 (1%)

Query: 160 KHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHRED-YF 218
           +  +GE+E +      + + R  +   G    D  E +       G+++E+    E    
Sbjct: 762 EEVEGEREKE--EGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEV 819

Query: 219 EPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEE 278
           E    +R    +EG+  +E    EE++ EGEE+E +   EEE +E E +    +   E E
Sbjct: 820 EEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGE 879

Query: 279 EEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
           EE+ E EGEE+ EGEG++   +   +E+G  + E E
Sbjct: 880 EEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEE 915



 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 11/151 (7%)

Query: 160  KHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFE 219
            +  +GE E++  G     +  G     G    +++E +        + E +    E   E
Sbjct: 881  EEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGE 940

Query: 220  PISPDRNSVPQEGQYS---DEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPE 276
                +     +EG++    +EGE E E++ EGE +E + + EEEE E E +        E
Sbjct: 941  GEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEE-------E 993

Query: 277  EEEEDEEEEGEEDEEGEGDDGYEQISSDEDG 307
            E EE+ EEEGE +EEGEG +G E+   + +G
Sbjct: 994  EGEEEGEEEGEGEEEGEG-EGEEEEEGEVEG 1023



 Score = 60.5 bits (145), Expect = 9e-09
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 160  KHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFE 219
            +  +GE E++  G     +  G     G     + E++       G+ E +    E   E
Sbjct: 898  EEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEE------EGEGEGEDGEGEGEEE 951

Query: 220  PISPDRNSVPQEGQYSDEGEVEEEQQE-EGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEE 278
                +      EG+  +EGE E E+ E EGEE+E + + EEEE E+E +         E 
Sbjct: 952  EGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEG 1011

Query: 279  EEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
            E +EEEEGE + E EG++G  +   +E      ERE
Sbjct: 1012 EGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEERE 1047



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 165  EKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPD 224
            E+E ++ G     +  G     G     + E +       G++EE     E+  E     
Sbjct: 950  EEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEG 1009

Query: 225  RNSVPQEGQYSDEGEVEEEQQE-EGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDE- 282
                 +E +   EGEVE E+ E EGEE+E + + EE E E E +    +   EEEEE + 
Sbjct: 1010 EGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKY 1069

Query: 283  EEEGEEDEEGEGDDGYEQISSDEDGIADLERETFK 317
            +E GEE+ E +  + Y+++S  +  +   + +T++
Sbjct: 1070 QETGEEENERQDGEEYKKVSKIKGSVKYGKHKTYQ 1104



 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 6/114 (5%)

Query: 205 GDKEEDAPHREDYFEPISPDRNSVPQEGQYSDE---GEVEEEQQEEGEEDEDDVDVEEEE 261
           G++EE     E+  E    +      EG+  +E   GE EEE + EGEE+E + +  EEE
Sbjct: 849 GEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGE-GEEE 907

Query: 262 DEDEDDRRTVDSIPEEEEEDEEEEGEEDE-EGEGDDGYEQISSDEDGIADLERE 314
            E E +    +   EEE E+ E EGEE+E EGEG+DG E    +E+G  + E E
Sbjct: 908 GEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDG-EGEGEEEEGEWEGEEE 960



 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 18/189 (9%)

Query: 156 KRNPKHADGEKE-DQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHR 214
           +R  K   GE+E DQ  G     + RG     G      + ++        ++EE+    
Sbjct: 779 ERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKG--EREEEEEEGEGE 836

Query: 215 EDYFEPISPDRNSVPQEGQ-----YSDEGEVEEEQQE---EGEEDEDDVDVEEE-EDEDE 265
           E+  E    +     +EG+       +EGE EEE +E   EGEE+E + + EEE E E E
Sbjct: 837 EEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGE 896

Query: 266 DDRRTVDSIPEEEEEDEEEEGE-----EDEEGEGDDGYEQISSD-EDGIADLERETFKYP 319
           ++    +   E E E EEEEGE     E EEGEG+   E+   + EDG  + E E  ++ 
Sbjct: 897 EEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWE 956

Query: 320 NFDVEYTAE 328
             + E   E
Sbjct: 957 GEEEEGEGE 965



 Score = 53.9 bits (128), Expect = 9e-07
 Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 4/113 (3%)

Query: 205 GDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQE-EGE-EDEDDVDVEEEED 262
           G++E +    E+  E    +      EG+  +EGE E E++E EGE E+E + + EEEE 
Sbjct: 858 GEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEG 917

Query: 263 EDEDDRRTVDSIPEEEEEDEEEEGEEDE-EGEGDDGYEQISSDEDGIADLERE 314
           E + +    +   E EEE+ E EGE+ E EGE ++G E    +E+G  + E E
Sbjct: 918 EGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEG-EWEGEEEEGEGEGEEE 969



 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 16/166 (9%)

Query: 156 KRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPP-------DDDEDDPVPLPVSGDKE 208
           K   K  DGE+++Q        + R      G           + D ++       G +E
Sbjct: 699 KEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEE 758

Query: 209 EDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDR 268
            +    E   E    +R    + G+  ++GE EE  Q EGEE+E +   EE+E+  E + 
Sbjct: 759 GEGEEVEGEREKEEGERKKEERAGK-EEKGE-EEGDQGEGEEEETEGRGEEKEEGGEVEG 816

Query: 269 RTVD------SIPEEEEEDEEEEGE-EDEEGEGDDGYEQISSDEDG 307
             V+         EEE E EEEEGE E+EEGEG++   +   +E+G
Sbjct: 817 GEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEG 862



 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 15/162 (9%)

Query: 160  KHADGEKE-DQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYF 218
            +  +GE+E ++  G     +  G     G    +++E +       G++E +    E+  
Sbjct: 863  EEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEG-----EGEEEGEGEGEEEEG 917

Query: 219  EPISPDRNSVPQEGQYSDEGEVEEEQQE-EGEEDEDDVDVEEEEDEDEDDRRTVDSIPEE 277
            E    +     +     +EGE E E  E EGEE+E + + EEEE E E +         E
Sbjct: 918  EGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGE--GE 975

Query: 278  EEEDE--EEEGE---EDEEGEGDDGYEQISSDEDGIADLERE 314
            E E E  EEEGE   E+EEGE ++G E+   +E+G  + E E
Sbjct: 976  EGEGEGEEEEGEGEGEEEEGE-EEGEEEGEGEEEGEGEGEEE 1016



 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 230 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED 289
           +EG   +E E E E +EEGE +E + + E+EE E + + R       EEE D+ E  EE+
Sbjct: 741 EEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEE 800

Query: 290 EEGEGDD----GYEQISSDEDGIADLERE 314
            EG G++    G  +    E+G  + E E
Sbjct: 801 TEGRGEEKEEGGEVEGGEVEEGKGEREEE 829



 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 3/102 (2%)

Query: 202 PVSGDKE---EDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVE 258
           P  G+KE   ++   + D  E    +R    Q+ +  +  E  EE+  EGEE+E D + E
Sbjct: 689 PGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEE 748

Query: 259 EEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ 300
           EE++ +  +    + +  E E++E E  +E+  G+ + G E+
Sbjct: 749 EEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEE 790



 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 207 KEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEE-EDEDE 265
           +E++   RE   +    +RN   +EG   + GE EEE+ +  EE+E + + +EE E E+ 
Sbjct: 708 EEQEQKEREQGHQK---ERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEV 764

Query: 266 DDRRTVDSIPEEEEEDEEEEGEEDE-EGEGDDGYEQISSDEDGIADLERETFKYPNFDVE 324
           +  R  +   E E + EE  G+E++ E EGD G E    + +G  + + E  +    +VE
Sbjct: 765 EGEREKE---EGERKKEERAGKEEKGEEEGDQG-EGEEEETEGRGEEKEEGGEVEGGEVE 820



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 236 DEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEG- 294
           D+G  E E+  EGE++  + +  ++ D +E +++  +   ++E   E EEG E+E GEG 
Sbjct: 680 DKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGE 739

Query: 295 -DDGYEQISSDEDGIADLERE 314
            ++G  +   +++G    E E
Sbjct: 740 EEEGDREEEEEKEGEGKEEGE 760



 Score = 39.7 bits (91), Expect = 0.017
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 7/87 (8%)

Query: 229 PQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEE-EDEEEEG- 286
           P EG+  +  E EE ++ +GEE E     E E+   ++  + ++   EEE  E EEEEG 
Sbjct: 689 PGEGE-KELAEKEEWKKRDGEEQEQK---EREQGHQKERNQEMEEGGEEEHGEGEEEEGD 744

Query: 287 -EEDEEGEGDDGYEQISSDEDGIADLE 312
            EE+EE EG+   E    + +G  + E
Sbjct: 745 REEEEEKEGEGKEEGEGEEVEGEREKE 771



 Score = 38.5 bits (88), Expect = 0.037
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 18/98 (18%)

Query: 234 YSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTV------------DSIPEEEEED 281
           +SDE EVE  +++EG ED     +EE+E E  ++   V            D + ++ E  
Sbjct: 579 FSDE-EVEIPEEKEGAEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVS 637

Query: 282 EEE-----EGEEDEEGEGDDGYEQISSDEDGIADLERE 314
           E +     E E+  EG GD   E+ SS  +   D ERE
Sbjct: 638 EGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEERE 675



 Score = 37.7 bits (86), Expect = 0.063
 Identities = 20/76 (26%), Positives = 41/76 (53%)

Query: 232 GQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEE 291
           G+    GE E+E  E+ E  + D + +E+++ ++  ++  +   EE  E+E  EGEE+E 
Sbjct: 684 GEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEG 743

Query: 292 GEGDDGYEQISSDEDG 307
              ++  ++    E+G
Sbjct: 744 DREEEEEKEGEGKEEG 759



 Score = 32.7 bits (73), Expect = 2.0
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 1/123 (0%)

Query: 196 DDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDV 255
           D+ V +P   +  ED+       + +  +  +V   G   ++ E+  +   +  E  +  
Sbjct: 581 DEEVEIPEEKEGAEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVSEGK 640

Query: 256 DVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADL-ERE 314
                E ED  + R   +  E     E  + EE E+GE D G  ++    +G  +L E+E
Sbjct: 641 AKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKE 700

Query: 315 TFK 317
            +K
Sbjct: 701 EWK 703



 Score = 31.2 bits (69), Expect = 5.9
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 16/108 (14%)

Query: 214 REDYFEPISPDRNSVPQ--EGQYSDEGEVEEEQQ-------EEGEEDEDD-VDVEEEEDE 263
           R++  E +S D     +  EG+    GE E+  +       EEG    +   D E E+ E
Sbjct: 619 RKEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGE 678

Query: 264 DEDDRRTVDSIPE------EEEEDEEEEGEEDEEGEGDDGYEQISSDE 305
            +  R  ++   E      E+EE ++ +GEE E+ E + G+++  + E
Sbjct: 679 KDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQE 726


>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
           phosphoprotein 32 family, member B [Homo sapiens]
          Length = 272

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 24/122 (19%)

Query: 191 PDDDEDDPVPLPVSG-DKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQE-EG 248
           P+D E       V G DKEE+    ED       +++   ++G+  +  E E+E ++ EG
Sbjct: 170 PEDQEAPDSDAQVDGVDKEEEDEEGED-------EKDXENEDGEEEELDEEEDEDEDVEG 222

Query: 249 EEDEDDVDVEEEE---DEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDE 305
           ++D+D+V  EEEE   D+DEDD            EDE+E+ EE+E G+G++   +   +E
Sbjct: 223 DDDKDEVSEEEEEFGLDKDEDD------------EDEDEDEEEEESGKGENRKRETDDEE 270

Query: 306 DG 307
           DG
Sbjct: 271 DG 272



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 2/71 (2%)

Query: 236 DEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGD 295
           D  + E+++  + +   D VD EEE++E ED++   +   EEEE DEEE  +EDE+ EGD
Sbjct: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEE--DEDEDVEGD 223

Query: 296 DGYEQISSDED 306
           D  +++S +E+
Sbjct: 224 DDKDEVSEEEE 234



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 230 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED 289
           QE   SD      +++EE EE ED+ D E E+ E+E+    +D   E+E+ED E + ++D
Sbjct: 173 QEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEE----LDE-EEDEDEDVEGDDDKD 227

Query: 290 E--EGEGDDGYEQISSDEDGIADLERE 314
           E  E E + G ++   DED   D E E
Sbjct: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEE 254



 Score = 40.4 bits (93), Expect = 0.010
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)

Query: 253 DDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLE 312
           D  D E++E  D D +  VD + ++EEEDEE E E+D E E D   E++  +ED   D+E
Sbjct: 166 DTYDPEDQEAPDSDAQ--VDGV-DKEEEDEEGEDEKDXENE-DGEEEELDEEEDEDEDVE 221

Query: 313 RETFK 317
            +  K
Sbjct: 222 GDDDK 226


>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
           phosphoprotein 32 family, member B [Homo sapiens]
          Length = 272

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 24/122 (19%)

Query: 191 PDDDEDDPVPLPVSG-DKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQE-EG 248
           P+D E       V G DKEE+    ED       +++   ++G+  +  E E+E ++ EG
Sbjct: 170 PEDQEAPDSDAQVDGVDKEEEDEEGED-------EKDXENEDGEEEELDEEEDEDEDVEG 222

Query: 249 EEDEDDVDVEEEE---DEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDE 305
           ++D+D+V  EEEE   D+DEDD            EDE+E+ EE+E G+G++   +   +E
Sbjct: 223 DDDKDEVSEEEEEFGLDKDEDD------------EDEDEDEEEEESGKGENRKRETDDEE 270

Query: 306 DG 307
           DG
Sbjct: 271 DG 272



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 2/71 (2%)

Query: 236 DEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGD 295
           D  + E+++  + +   D VD EEE++E ED++   +   EEEE DEEE  +EDE+ EGD
Sbjct: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEE--DEDEDVEGD 223

Query: 296 DGYEQISSDED 306
           D  +++S +E+
Sbjct: 224 DDKDEVSEEEE 234



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 230 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED 289
           QE   SD      +++EE EE ED+ D E E+ E+E+    +D   E+E+ED E + ++D
Sbjct: 173 QEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEE----LDE-EEDEDEDVEGDDDKD 227

Query: 290 E--EGEGDDGYEQISSDEDGIADLERE 314
           E  E E + G ++   DED   D E E
Sbjct: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEE 254



 Score = 40.4 bits (93), Expect = 0.010
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)

Query: 253 DDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLE 312
           D  D E++E  D D +  VD + ++EEEDEE E E+D E E D   E++  +ED   D+E
Sbjct: 166 DTYDPEDQEAPDSDAQ--VDGV-DKEEEDEEGEDEKDXENE-DGEEEELDEEEDEDEDVE 221

Query: 313 RETFK 317
            +  K
Sbjct: 222 GDDDK 226


>gi|21361639 DIPB protein [Homo sapiens]
          Length = 344

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 17/178 (9%)

Query: 231 EGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDE 290
           EG   +E EV+ EQ+ E E +  +    EEE E E++  T +   +E +E+ EE+ EE+ 
Sbjct: 74  EGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEM 133

Query: 291 EGEGDDGYEQISSDEDGIADLERETFKYPNFD--VEYTAEDLA-------SVPPMTYDPY 341
           E E +   E+  + E+G ++ E ET     FD  +E  AE +A        +   TY   
Sbjct: 134 EDEQESEAEE-DNQEEGESEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLDLSTYCQE 192

Query: 342 DRELVPLLYFSCPYKTTFE----IEISRMKDQGPDKENSGAIEASVKLTELLDLYRED 395
           DR+L+ +L   CP     +      +    ++   K++ G   A ++L E L     D
Sbjct: 193 DRQLICVL---CPVIGAHQGHQLSTLDEAFEELRSKDSGGLKAAMIELVERLKFKSSD 247


>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
          Length = 727

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 77/355 (21%), Positives = 142/355 (40%), Gaps = 41/355 (11%)

Query: 160 KHADGEKEDQFNGS----PPRPQP-------RGPRTPPGPPPPDDDEDDPVPLPVSGDKE 208
           K  D +++ + + S    P + QP       R P      P PD  E   + +     + 
Sbjct: 107 KRLDADRKIRLSSSASREPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRS 166

Query: 209 EDAPHREDYFEPISPDR------NSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEED 262
             +   E   E    D       +S  Q     +E E  EE  EE EE E+D + +EE D
Sbjct: 167 SQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVD 226

Query: 263 EDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERETFKYPNFD 322
           ED ++    +   EEEEE+EEEE E+DE  + ++G +  +  E   +D   E+  + +  
Sbjct: 227 EDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSE--ASDSGSESVSFTDGS 284

Query: 323 VEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFEIEISRMKDQGPDKENSGAIEAS 382
           V   +    S          R + P+++                      +  +G+ +  
Sbjct: 285 VRSGSGTDGSDEKKKERKRARGISPIVF--------------DRSGSSASESYAGSEKKH 330

Query: 383 VKLTELLDLYREDRGAKWVTALEEIPSLIIKGLSYLQLKNTKQDSLGQLVDWTMQALNLQ 442
            KL+  +   R+D+ +K    L++    +IK  ++  +   K   +   +    + LNL 
Sbjct: 331 EKLSSSVRAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLA 390

Query: 443 VALRQPIAL--NVRQLK--AGTKLVSSLAECGAQGVTGLLQAG----VISGLFEL 489
               + + L  +VR+     G   +SS +  G   +  +L AG    ++ G+F++
Sbjct: 391 FRSARSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKI 445


>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member B [Homo sapiens]
          Length = 251

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 9/108 (8%)

Query: 210 DAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEG-------EEDEDDVDVEEEED 262
           D   RED   P S        E +  +EGE EE++ +E        EED++D DVE +ED
Sbjct: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205

Query: 263 EDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIAD 310
           +DE      +   +EE+EDE+E+ EE+E G+G+    +  +D++G  D
Sbjct: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEK--RKRETDDEGEDD 251



 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 234 YSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGE 293
           Y D  + E+++  + + + D VD EEE++E ED+    D   EEEE DEE++ +ED EG+
Sbjct: 144 YLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGD 203

Query: 294 GDDGYEQISSDED 306
            DD  +++S +E+
Sbjct: 204 EDD--DEVSEEEE 214



 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 6/87 (6%)

Query: 230 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED 289
           +E Q + + + E +  +E EEDE+  D E+E+DED ++    +   EE++EDE+ EG+ED
Sbjct: 150 REDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEE----EEFDEEDDEDEDVEGDED 205

Query: 290 EE--GEGDDGYEQISSDEDGIADLERE 314
           ++   E ++ +     DED   D E E
Sbjct: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEE 232



 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 12/106 (11%)

Query: 193 DDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQE-EGEED 251
           D ED   P     D E D    E+  E    + +   ++G+  +  E ++E ++ EG+ED
Sbjct: 149 DREDQEAP---DSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205

Query: 252 EDDVDVEEEE--------DEDEDDRRTVDSIPEEEEEDEEEEGEED 289
           +D+V  EEEE        DEDED+        E+ + + ++EGE+D
Sbjct: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251



 Score = 41.2 bits (95), Expect = 0.006
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 33/104 (31%)

Query: 192 DDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEED 251
           DD++ +        D++ED                    EG   D+ EV EE++E G ++
Sbjct: 181 DDEDGEEEEFDEEDDEDEDV-------------------EGD-EDDDEVSEEEEEFGLDE 220

Query: 252 EDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGD 295
           ED     E+EDEDE++        EE  + E+ + E D+EGE D
Sbjct: 221 ED-----EDEDEDEEE--------EEGGKGEKRKRETDDEGEDD 251



 Score = 32.3 bits (72), Expect = 2.7
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 11/81 (13%)

Query: 192 DDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEED 251
           ++DEDD         +EE+    +D  E +  D +      +  + G  EE++ E+ +E+
Sbjct: 177 EEDEDD------EDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEE 230

Query: 252 ED-----DVDVEEEEDEDEDD 267
           E+     +    E +DE EDD
Sbjct: 231 EEEGGKGEKRKRETDDEGEDD 251


>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
          Length = 709

 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 17/174 (9%)

Query: 160 KHADGEKEDQFNGS----PPRPQP-------RGPRTPPGPPPPDDDEDDPVPLPVSGDKE 208
           K  D +++ + + S    P + QP       R P      P PD  E   + +     + 
Sbjct: 107 KRLDADRKIRLSSSASREPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRS 166

Query: 209 EDAPHREDYFEPISPDR------NSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEED 262
             +   E   E    D       +S  Q     +E E  EE  EE EE E+D + +EE D
Sbjct: 167 SQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVD 226

Query: 263 EDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERETF 316
           ED ++    +   EEEEE+EEEE E+DE  + ++G +  +  E   +  E  +F
Sbjct: 227 EDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSF 280



 Score = 40.0 bits (92), Expect = 0.013
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 235 SDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEG 294
           S+E   + E    G  DE   + E EE+  E+D        EE+EE  EE+ EEDEE + 
Sbjct: 176 SEEYGSDHETGSSGSSDEQGNNTENEEEGVEED-------VEEDEE-VEEDAEEDEEVD- 226

Query: 295 DDGYEQISSDEDGIADLERETFKY 318
           +DG E+   +E+   + E E  +Y
Sbjct: 227 EDGEEEEEEEEEEEEEEEEEEEEY 250



 Score = 38.9 bits (89), Expect = 0.028
 Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 38/127 (29%)

Query: 192 DDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEED 251
           D +ED+ V      D+E D                          +GE EEE++EE EE+
Sbjct: 208 DVEEDEEVEEDAEEDEEVDE-------------------------DGEEEEEEEEEEEEE 242

Query: 252 EDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGD----DGYEQISSDEDG 307
           E     EEEE+E E D R      +EE  D +   E  + G       DG  +  S  DG
Sbjct: 243 E-----EEEEEEYEQDERD----QKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDG 293

Query: 308 IADLERE 314
             + ++E
Sbjct: 294 SDEKKKE 300


>gi|55956788 nucleolin [Homo sapiens]
          Length = 710

 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 10/131 (7%)

Query: 163 DGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPIS 222
           D E ED+        +P   +     P  +D++D+        D +E+    E+  E   
Sbjct: 159 DDEDEDE---DEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTP 215

Query: 223 PDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDE 282
                  +      +   E+E +EE +EDEDD D E++ED+D++D        EEEEE+E
Sbjct: 216 AKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDED-------DEEEEEEE 268

Query: 283 EEEGEEDEEGE 293
           EEE  ++  G+
Sbjct: 269 EEEPVKEAPGK 279



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 25/128 (19%)

Query: 192 DDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSV-PQEGQYSDEGEVEEEQQEEGEE 250
           D++EDD        D++ED    ED  EP +    +  P      DE + ++E  ++ EE
Sbjct: 146 DEEEDDDSEEDEEDDEDEDED--EDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEE 203

Query: 251 DEDDVD----------------------VEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEE 288
           D+ + +                      V E+EDE+EDD    D   E++E+D++E+ EE
Sbjct: 204 DDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEE 263

Query: 289 DEEGEGDD 296
           +EE E ++
Sbjct: 264 EEEEEEEE 271



 Score = 53.9 bits (128), Expect = 9e-07
 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 40/142 (28%)

Query: 201 LPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEE-----------GE 249
           +P  G K      +ED  E    D     +E +  DE E E+E + E             
Sbjct: 129 IPAKGAKNGKNAKKEDSDEEEDDDS----EEDEEDDEDEDEDEDEIEPAAMKAAAAAPAS 184

Query: 250 EDEDDVDVEEEEDEDEDD----------------RRTVDSIP---------EEEEEDEEE 284
           EDEDD D E++ED+D+D+                ++    +P         E+EEED+E+
Sbjct: 185 EDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDED 244

Query: 285 EGEEDEEGEGDDGYEQISSDED 306
           E ++D+E + DD  E    +E+
Sbjct: 245 EDDDDDEDDEDDDDEDDEEEEE 266



 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 4/80 (5%)

Query: 230 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEE-EEDEEEEGEE 288
           + G+ + + + +EE+ ++ EEDE+D D +E+EDEDE +   + +       EDE++E +E
Sbjct: 135 KNGKNAKKEDSDEEEDDDSEEDEED-DEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDE 193

Query: 289 DEEGEGDDGYEQISSDEDGI 308
           D+E + DD  E+  S+E+ +
Sbjct: 194 DDEDDDDD--EEDDSEEEAM 211



 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 12/84 (14%)

Query: 227 SVPQEGQYSDEGEVEEEQQEEGEEDEDD-VDVEEEEDEDEDD-------RRTVDSIPEEE 278
           ++P +G  + +   +E+  EE  ED+D   D E++EDEDED+        +   + P  E
Sbjct: 128 AIPAKGAKNGKNAKKEDSDEE--EDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASE 185

Query: 279 EEDEE--EEGEEDEEGEGDDGYEQ 300
           +ED+E  E+ E+D++ E DD  E+
Sbjct: 186 DEDDEDDEDDEDDDDDEEDDSEEE 209


>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member A [Homo sapiens]
          Length = 249

 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 9/99 (9%)

Query: 206 DKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDE---DDVDVEEEED 262
           DKE      E Y E +  +     +E +Y ++ +V E++++E EE+E   +DV  EEEED
Sbjct: 152 DKEAPDSDAEGYVEGLDDEEEDEDEE-EYDEDAQVVEDEEDEDEEEEGEEEDVSGEEEED 210

Query: 263 EDEDDRRTVDSIPEEEEEDEEEEG-----EEDEEGEGDD 296
           E+  +   VD   +EEE  EEE G     E ++EGE DD
Sbjct: 211 EEGYNDGEVDDEEDEEELGEEERGQKRKREPEDEGEDDD 249



 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 241 EEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ 300
           EEE ++E E DED   VE+EEDEDE++    + +  EEEEDE  EG  D E + ++  E+
Sbjct: 170 EEEDEDEEEYDEDAQVVEDEEDEDEEEEGEEEDVSGEEEEDE--EGYNDGEVDDEEDEEE 227

Query: 301 ISSDEDG 307
           +  +E G
Sbjct: 228 LGEEERG 234



 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 9/82 (10%)

Query: 231 EGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED- 289
           +G   D+ E  +   E   E  DD + +E+E+E ++D + V+   +EE+EDEEEEGEE+ 
Sbjct: 146 DGYDRDDKEAPDSDAEGYVEGLDDEEEDEDEEEYDEDAQVVE---DEEDEDEEEEGEEED 202

Query: 290 ---EEGEGDDGYE--QISSDED 306
              EE E ++GY   ++  +ED
Sbjct: 203 VSGEEEEDEEGYNDGEVDDEED 224



 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 10/80 (12%)

Query: 237 EGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEE--GEEDEEGEG 294
           EG VE    EE +EDE++ D + +  EDE+D        +EEEE EEE+  GEE+E+ EG
Sbjct: 161 EGYVEGLDDEEEDEDEEEYDEDAQVVEDEEDE-------DEEEEGEEEDVSGEEEEDEEG 213

Query: 295 -DDGYEQISSDEDGIADLER 313
            +DG      DE+ + + ER
Sbjct: 214 YNDGEVDDEEDEEELGEEER 233



 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 224 DRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDV----EEEEDEDEDDRRTVDSIPEEEE 279
           D+ +   + +   EG  +EE+ E+ EE ++D  V    E+E++E+E +   V    EE+E
Sbjct: 152 DKEAPDSDAEGYVEGLDDEEEDEDEEEYDEDAQVVEDEEDEDEEEEGEEEDVSGEEEEDE 211

Query: 280 E---DEEEEGEEDEE--GEGDDGYEQISSDED 306
           E   D E + EEDEE  GE + G ++    ED
Sbjct: 212 EGYNDGEVDDEEDEEELGEEERGQKRKREPED 243



 Score = 37.7 bits (86), Expect = 0.063
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 13/73 (17%)

Query: 253 DDVDVEEEEDEDEDDRRTVDSIPEEEE-EDE------------EEEGEEDEEGEGDDGYE 299
           D  D +++E  D D    V+ + +EEE EDE            EE+ +E+EEGE +D   
Sbjct: 146 DGYDRDDKEAPDSDAEGYVEGLDDEEEDEDEEEYDEDAQVVEDEEDEDEEEEGEEEDVSG 205

Query: 300 QISSDEDGIADLE 312
           +   DE+G  D E
Sbjct: 206 EEEEDEEGYNDGE 218



 Score = 31.6 bits (70), Expect = 4.5
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 264 DEDDRRTVDSIPEEEEE--DEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
           D DD+   DS  E   E  D+EEE E++EE + D    +   DED   + E E
Sbjct: 149 DRDDKEAPDSDAEGYVEGLDDEEEDEDEEEYDEDAQVVEDEEDEDEEEEGEEE 201


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 60.5 bits (145), Expect = 9e-09
 Identities = 59/238 (24%), Positives = 85/238 (35%), Gaps = 56/238 (23%)

Query: 137 DSPPPPPPPPPP----PQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPD 192
           D  P PPP P      P P PS                + SP  P P  P  PP PP P 
Sbjct: 181 DGGPAPPPAPSSASSSPSPSPS----------------SSSPSPPPPPPPPAPPAPPAPR 224

Query: 193 DDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDE 252
            D  DP             P  E Y  P +P++   P E   S+          E EE+E
Sbjct: 225 FDIYDPFH-----------PTDEAYSPPPAPEQKYDPFEPTGSNPSSSAGTPSPEEEEEE 273

Query: 253 DDVDVEEEEDEDEDD---------RRTVDSIPEEEEEDEEEEGEEDEEGEGDDGY----- 298
           ++ + EEEEDE+E++           T+  I ++    ++  G+E    +          
Sbjct: 274 EEEEEEEEEDEEEEEGLSQSISRISETLAGIYDDNSLSQDFPGDESPRPDAQPTQPTPAP 333

Query: 299 ----EQISSDEDG-------IADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDREL 345
               +  S+  DG       +   E E  +     VE      A++PP    P D E+
Sbjct: 334 GTPPQVDSTRADGAMRRRVFVVGTEAEACREGKVSVEVVTAGGAALPPPLLPPGDSEI 391



 Score = 33.5 bits (75), Expect = 1.2
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 22/136 (16%)

Query: 164  GEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISP 223
            G +E  ++G     + R  + P  PPP    +  P P  ++ D +             + 
Sbjct: 958  GAEETSWSG-----EERAAKVPSTPPP----KAAPPPPALTPDSQ-------------TV 995

Query: 224  DRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEE 283
            D +    E  +  E   EE     G E+E++ + EEEE+E+E++++   +          
Sbjct: 996  DSSCKTPEVSFLPEEATEEAGVRGGAEEEEEEEEEEEEEEEEEEQQPATTTATSTAAAAP 1055

Query: 284  EEGEEDEEGEGDDGYE 299
                      GD G E
Sbjct: 1056 STAPSAGSTAGDSGAE 1071



 Score = 33.5 bits (75), Expect = 1.2
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 12/112 (10%)

Query: 186  PGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQ 245
            P  PPP      P   P S   +             +P+ + +P+E   ++E  V    +
Sbjct: 974  PSTPPPKAAPPPPALTPDSQTVDSSCK---------TPEVSFLPEEA--TEEAGVRGGAE 1022

Query: 246  EEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDG 297
            EE EE+E++ + EEEE+E +    T  S            G    +   +DG
Sbjct: 1023 EE-EEEEEEEEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDG 1073


>gi|115529449 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 10/108 (9%)

Query: 214 REDYFEPISPDRNSV-------PQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDED 266
           R  Y E IS  R S+       P+  + + + + E E+ +E +ED++D D EEE+DE+ D
Sbjct: 605 RAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGD 664

Query: 267 DRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
                    E   EDE E+G+E+EE   DD  E    D+D   D E E
Sbjct: 665 SSEDGGDSSESSSEDESEDGDENEE---DDEDEDDDEDDDEDEDNESE 709



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 35/133 (26%)

Query: 177 PQPRGPRTP---PGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQ 233
           P P+  RT          DD+ED+        D++ED    +D       +     ++G 
Sbjct: 625 PNPKSSRTTLQSKSESEEDDEEDED-------DEDEDEEEEDD-------ENGDSSEDGG 670

Query: 234 YSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGE 293
            S E   E+E ++  E +EDD    E+ED+DEDD         +E+ED E EG       
Sbjct: 671 DSSESSSEDESEDGDENEEDD----EDEDDDEDD---------DEDEDNESEGSSSSSSS 717

Query: 294 GDDGYEQISSDED 306
             D     SSD D
Sbjct: 718 SGD-----SSDSD 725


>gi|115529451 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 10/108 (9%)

Query: 214 REDYFEPISPDRNSV-------PQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDED 266
           R  Y E IS  R S+       P+  + + + + E E+ +E +ED++D D EEE+DE+ D
Sbjct: 605 RAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGD 664

Query: 267 DRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
                    E   EDE E+G+E+EE   DD  E    D+D   D E E
Sbjct: 665 SSEDGGDSSESSSEDESEDGDENEE---DDEDEDDDEDDDEDEDNESE 709



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 35/133 (26%)

Query: 177 PQPRGPRTP---PGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQ 233
           P P+  RT          DD+ED+        D++ED    +D       +     ++G 
Sbjct: 625 PNPKSSRTTLQSKSESEEDDEEDED-------DEDEDEEEEDD-------ENGDSSEDGG 670

Query: 234 YSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGE 293
            S E   E+E ++  E +EDD    E+ED+DEDD         +E+ED E EG       
Sbjct: 671 DSSESSSEDESEDGDENEEDD----EDEDDDEDD---------DEDEDNESEGSSSSSSS 717

Query: 294 GDDGYEQISSDED 306
             D     SSD D
Sbjct: 718 SGD-----SSDSD 725


>gi|7657671 upstream binding transcription factor, RNA polymerase I
           isoform a [Homo sapiens]
          Length = 764

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 10/108 (9%)

Query: 214 REDYFEPISPDRNSV-------PQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDED 266
           R  Y E IS  R S+       P+  + + + + E E+ +E +ED++D D EEE+DE+ D
Sbjct: 642 RAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGD 701

Query: 267 DRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
                    E   EDE E+G+E+EE   DD  E    D+D   D E E
Sbjct: 702 SSEDGGDSSESSSEDESEDGDENEE---DDEDEDDDEDDDEDEDNESE 746



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 35/133 (26%)

Query: 177 PQPRGPRTP---PGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQ 233
           P P+  RT          DD+ED+        D++ED    +D       +     ++G 
Sbjct: 662 PNPKSSRTTLQSKSESEEDDEEDED-------DEDEDEEEEDD-------ENGDSSEDGG 707

Query: 234 YSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGE 293
            S E   E+E ++  E +EDD    E+ED+DEDD         +E+ED E EG       
Sbjct: 708 DSSESSSEDESEDGDENEEDD----EDEDDDEDD---------DEDEDNESEGSSSSSSS 754

Query: 294 GDDGYEQISSDED 306
             D     SSD D
Sbjct: 755 SGD-----SSDSD 762


>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
          Length = 1321

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 60/258 (23%), Positives = 93/258 (36%), Gaps = 38/258 (14%)

Query: 127 SVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPP 186
           S+  +   D    PP P PP   Q     + +     G        S PRP+ R    P 
Sbjct: 599 SMQALAEEDLQHLPPQPLPPQLSQGDGRSETSQPPTPGSPSHSPLHSGPRPRRR-ESDPT 657

Query: 187 GPP-------PPDDDEDDPVPLPVSGDKEEDAPHREDYFE-------------------- 219
           GP        PP +    P  +P+S   ++      DY E                    
Sbjct: 658 GPQRQVFSVAPPFEVNGLPRAVPLSLPYQDFKRDLSDYRERARLLNRVRRVGFSHMLLTT 717

Query: 220 ------PISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDS 273
                 P+ P  N   +E +  ++ E EEE +EE EE+E++ + EEEE+E+E++     +
Sbjct: 718 PQVPLAPVQPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVA 777

Query: 274 IPE--EEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERETFKYPNFDVEYTAEDLA 331
           + E          EG E       +G       +D      R +    + + E  ++ L 
Sbjct: 778 LGEVLGPRSGSSSEGSERSTDRSQEGAPSTLLADDQKESRGRASMADGDLEPEEGSKTLV 837

Query: 332 SVPP--MTYDPYDRELVP 347
            V P  M   P   EL P
Sbjct: 838 LVSPGDMKKSPVTAELAP 855


>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
           exchanger), member 1 [Homo sapiens]
          Length = 1099

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 36/197 (18%)

Query: 135 DRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKED------------------------QF 170
           + + P   P     P P P +K + K   G +ED                        + 
Sbjct: 713 EEEEPAKLPAVTVTPAPVPDIKGDQKENPGGQEDVAEAESTGEMPGEEGETAGEGETEEK 772

Query: 171 NGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQ 230
           +G   +P+  G     G     +DE++      +  ++E   H ED  E    +  +  Q
Sbjct: 773 SGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAEDG-EMKGNEGETESQ 831

Query: 231 EGQYSDEGEVEEEQQEEGEED---EDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGE 287
           E    + GE + +  E+G ED    D  D EEEE+E+E+         EEEEE++EEE E
Sbjct: 832 ELSAENHGEAKND--EKGVEDGGGSDGGDSEEEEEEEEEQEE------EEEEEEQEEEEE 883

Query: 288 EDEEGEGDDGYEQISSD 304
           E+EE E     E +S D
Sbjct: 884 EEEEEEEKGNEEPLSLD 900



 Score = 30.8 bits (68), Expect = 7.7
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 230 QEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSI 274
           +E Q  +E E E+E++EE EE+E++   EE    D  + R   +I
Sbjct: 866 EEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAI 910


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 58.2 bits (139), Expect = 5e-08
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 12/148 (8%)

Query: 139   PPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDP 198
             P  P P    P P P     P     E   +      +P P  P+    PPP    + +P
Sbjct: 10036 PKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPV-PKKVEAPPPKVPKKREP 10094

Query: 199   VPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVE 258
             VP+PV+  +EE+    E+           VP+E    +E EV  E++E   E+E+ +  E
Sbjct: 10095 VPVPVALPQEEEVLFEEEI----------VPEEEVLPEEEEVLPEEEEVLPEEEEVLPEE 10144

Query: 259   EE-EDEDEDDRRTVDSIPEEEEEDEEEE 285
             EE   E+E+     + +PEEEE   EEE
Sbjct: 10145 EEIPPEEEEVPPEEEYVPEEEEFVPEEE 10172



 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 25/181 (13%)

Query: 131   VISHDRDSPPPPPPPPPPPQPQPSLKRN---PKHADGE--------KEDQFNGSPPRPQP 179
             V+   ++ PPP   P  P +P P  K     PK  +          K+       P P P
Sbjct: 9991  VLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKKPVPEKKVPVPAP 10050

Query: 180   RGPRTPPGPPP-------PDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEG 232
             +    PP   P       P++ +  PVP  V     +    RE    P++     +PQE 
Sbjct: 10051 KKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREPVPVPVA-----LPQEE 10105

Query: 233   QYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEE--DEEEEGEEDE 290
             +   E E+  E++   EE+E   + EE   E+E+     + IP EEEE   EEE   E+E
Sbjct: 10106 EVLFEEEIVPEEEVLPEEEEVLPEEEEVLPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEE 10165

Query: 291   E 291
             E
Sbjct: 10166 E 10166



 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 29/180 (16%)

Query: 131  VISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPP 190
            +++   +SPPP  P  P  +     K  P+     KE++         P  P+ P  P  
Sbjct: 9387 IVTQREESPPPAVPEIPKKKVPEERKPVPR-----KEEEV--------PPPPKVPALPKK 9433

Query: 191  PDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEE 250
            P  +E   VP+PV+  K+   P  E         + +V +E ++  E ++     +  E 
Sbjct: 9434 PVPEEKVAVPVPVA--KKAPPPRAE-------VSKKTVVEEKRFVAEEKLSFAVPQRVEV 9484

Query: 251  DEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIAD 310
               +V  EEE    E++     S+  EEE +EEEE E  E       YE +   E+ + +
Sbjct: 9485 TRHEVSAEEEWSYSEEEEGVSISVYREEEREEEEEAEVTE-------YEVMEEPEEYVVE 9537



 Score = 44.3 bits (103), Expect = 7e-04
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 28/199 (14%)

Query: 136  RDSPPPPPPPPPPPQPQPSLKRNPK---------------HADGEKEDQFNGSPPRPQ-P 179
            ++  PPP  P  P +P P  K  PK               H    +E++   +  + + P
Sbjct: 9600 KEKVPPPKVPEEPKKPVPEKKVPPKVIKMEEPLPAKVTERHMQITQEEKVLVAVTKKEAP 9659

Query: 180  RGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEP--ISPDRNSVP---QEGQY 234
               R P  P     +E     L +   +EE+ P +   F    +  ++ S+    +E Q 
Sbjct: 9660 PKARVPEEPKRAVPEEK---VLKLKPKREEEPPAKVTEFRKRVVKEEKVSIEAPKREPQP 9716

Query: 235  SDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEG 294
              E  + EE++     +E+ V V+ EE+ +E +        E E  +E ++ EE EE E 
Sbjct: 9717 IKEVTIMEEKERAYTLEEEAVSVQREEEYEEYEEYDYKEFEEYEPTEEYDQYEEYEERE- 9775

Query: 295  DDGYEQISSDEDGIADLER 313
               YE+    E+ I + E+
Sbjct: 9776 ---YERYEEHEEYITEPEK 9791



 Score = 40.8 bits (94), Expect = 0.007
 Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 16/129 (12%)

Query: 141   PPPPPPPPPQPQPSL------KRNPKHADGEKEDQFNGSPPRPQPRGPRTPPG-----PP 189
             P  P PPPP+P   +      KR  K  +  K  +   + P P P     P        P
Sbjct: 10975 PAVPEPPPPKPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPEPKPKPEAEVKTIKP 11034

Query: 190   PPDDDEDD----PVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQ 245
             PP + E      PV +PV G K E    +E+  +P  P +  VP++     E E  + + 
Sbjct: 11035 PPVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGPIK-GVPKKTPSPIEAERRKLRP 11093

Query: 246   EEGEEDEDD 254
               G E   D
Sbjct: 11094 GSGGEKPPD 11102



 Score = 40.0 bits (92), Expect = 0.013
 Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 24/163 (14%)

Query: 132   ISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPR---------GP 182
             I+ + + P P      P  P P++   PK    EK+      P  P P+          P
Sbjct: 10816 IAPEEEKPVPVAEEEEPEVPPPAVPEEPKKIIPEKKVPVIKKPEAPPPKEPEPEKVIEKP 10875

Query: 183   RTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEE 242
             +  P PPPP      P P       +ED   +E  F+  +  +  VP++ Q  ++ E+  
Sbjct: 10876 KLKPRPPPP-----PPAP------PKEDV--KEKIFQLKAIPKKKVPEKPQVPEKVELTP 10922

Query: 243   EQQEEGEEDEDDVDVEEEEDEDEDD--RRTVDSIPEEEEEDEE 283
              +   GE+    +  E + +  E+   +  +   PEEEE   E
Sbjct: 10923 LKVPGGEKKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVE 10965



 Score = 39.3 bits (90), Expect = 0.022
 Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)

Query: 139  PPPPPPPPPPPQPQPSLKRNP-------KHADGEKEDQFNGSPPRPQPRGPRTPPGPPPP 191
            PP   PP P   P P  K+ P       K A  +   +    P    PR       PPP 
Sbjct: 8958 PPVVAPPIPLLLPTPEEKKPPPKRIEVTKKAVKKDAKKVVAKPKEMTPREEIVKKPPPPT 9017

Query: 192  DDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQ---EGQYSDEGEVEEEQQ--- 245
                     +P    +  D   + +  + ++  R    Q   E  Y  +  V +E++   
Sbjct: 9018 -------TLIPAKAPEIIDVSSKAEEVKIMTITRKKEVQKEKEAVYEKKQAVHKEKRVFI 9070

Query: 246  EEGEEDEDDVDVE-----------EEEDEDEDDRRTV--DSIPEEEEED--------EEE 284
            E  EE  D+++VE           EE DED ++ +      + EE EED        E E
Sbjct: 9071 ESFEEPYDELEVEPYTEPFEQPYYEEPDEDYEEIKVEAKKEVHEEWEEDFEEGQEYYERE 9130

Query: 285  EGEEDEEGEGDDGYEQ 300
            EG ++ E E ++ Y++
Sbjct: 9131 EGYDEGEEEWEEAYQE 9146



 Score = 37.7 bits (86), Expect = 0.063
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 31/133 (23%)

Query: 129   DRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGP 188
             ++VI   +  P PPPPPP P          PK    EK  Q    P +  P  P+ P   
Sbjct: 10869 EKVIEKPKLKPRPPPPPPAP----------PKEDVKEKIFQLKAIPKKKVPEKPQVP--- 10915

Query: 189   PPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEG 248
                  ++ +  PL V G +++           + P+R   P+E     E  ++   ++  
Sbjct: 10916 -----EKVELTPLKVPGGEKK--------VRKLLPERKPEPKE-----EVVLKSVLRKRP 10957

Query: 249   EEDEDDVDVEEEE 261
             EE+E  V+ ++ E
Sbjct: 10958 EEEEPKVEPKKLE 10970



 Score = 36.2 bits (82), Expect = 0.18
 Identities = 43/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)

Query: 131   VISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGP-- 188
             V+   +   PPP  P  PP   P +   PK A  EK+      PP+P+   P  P  P  
Sbjct: 10532 VVPEKKVPVPPPKKPEVPPTKVPEV---PKAAVPEKKVP-EAIPPKPESPPPEVPEAPKE 10587

Query: 189   ---------PPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDR------NSVPQEGQ 233
                       PP   E  PV +P +   +E  P ++    P+ P +        VP+  +
Sbjct: 10588 VVPEKKVPAAPPKKPEVTPVKVPEA--PKEVVPEKK---VPVPPPKKPEVPPTKVPEVPK 10642

Query: 234   YS-DEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPE 276
              +  E +V E    + E    +V  E EE   E+    V   PE
Sbjct: 10643 VAVPEKKVPEAIPPKPESPPPEVFEEPEEVALEEPPAEVVEEPE 10686



 Score = 34.7 bits (78), Expect = 0.53
 Identities = 39/167 (23%), Positives = 59/167 (35%), Gaps = 22/167 (13%)

Query: 141   PPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDP-- 198
             P PP   P  P P +   PK    EK+       P P P+ P  PP   P       P  
Sbjct: 10511 PVPPAKKPEAPPPKVPEAPKEVVPEKK------VPVPPPKKPEVPPTKVPEVPKAAVPEK 10564

Query: 199   -VPLPVSGDKEEDAPHREDYFEPISPDRN--SVPQEGQYSDEGEVEEEQQEEGEEDEDDV 255
              VP  +    E   P   +  + + P++   + P +       +V E  +E   E +  V
Sbjct: 10565 KVPEAIPPKPESPPPEVPEAPKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEVVPEKKVPV 10624

Query: 256   -----------DVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEE 291
                         V E       +++  ++IP + E    E  EE EE
Sbjct: 10625 PPPKKPEVPPTKVPEVPKVAVPEKKVPEAIPPKPESPPPEVFEEPEE 10671



 Score = 33.9 bits (76), Expect = 0.91
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 17/102 (16%)

Query: 182  PRTPPGPPP----PDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDE 237
            P T P   P    PD+D ++   + V   KE      ED+ E          QE    +E
Sbjct: 9084 PYTEPFEQPYYEEPDEDYEE---IKVEAKKEVHEEWEEDFEEG---------QEYYEREE 9131

Query: 238  GEVE-EEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEE 278
            G  E EE+ EE  ++ + + V++E  E+  +R+    +PE++
Sbjct: 9132 GYDEGEEEWEEAYQEREVIQVQKEVYEESHERKVPAKVPEKK 9173



 Score = 33.9 bits (76), Expect = 0.91
 Identities = 45/164 (27%), Positives = 62/164 (37%), Gaps = 30/164 (18%)

Query: 137   DSPPPPPPPP---PPPQPQPSLK------RNP-----KHADGEKEDQFNGSPPRPQPRGP 182
             + P P  PP    PP +P P  K      + P     K  +  KE       P   P+ P
Sbjct: 10683 EEPEPAAPPQVTVPPKKPVPEKKAPAVVAKKPELPPVKVPEVPKEVVPEKKVPLVVPKKP 10742

Query: 183   RTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHR--EDYFEPISPDRNSVP-QEGQYSDEGE 239
               PP   P    E  P        K E  P +  E   +P+  ++ +VP  E   S   E
Sbjct: 10743 EAPPAKVPEVPKEVVPEKKVAVPKKPEVPPAKVPEVPKKPVLEEKPAVPVPERAESPPPE 10802

Query: 240   VEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEE 283
             V EE +E   E+E  +  EEE+            +P  EEE+ E
Sbjct: 10803 VYEEPEEIAPEEE--IAPEEEKP-----------VPVAEEEEPE 10833



 Score = 32.7 bits (73), Expect = 2.0
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 19/146 (13%)

Query: 175   PRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGD-----KEEDAPHREDYFEPISPDRNSVP 229
             P P P+    PP        E+  VP+PV        K  + P +    + + P + +VP
Sbjct: 10281 PTPVPKKVEAPPAKVSKKIPEEK-VPVPVQKKEAPPAKVPEVPKKVPEKKVLVPKKEAVP 10339

Query: 230   Q-EGQYSDEGEVEEE-QQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGE 287
               +G+   E +V    +QE   ++  +++V E E         V+ IPEEEE  E E  E
Sbjct: 10340 PAKGRTVLEEKVSVAFRQEVVVKERLELEVVEAE---------VEEIPEEEEFHEVE--E 10388

Query: 288   EDEEGEGDDGYEQISSDEDGIADLER 313
               EEGE  +  E I  ++  + +  R
Sbjct: 10389 YFEEGEFHEVEEFIKLEQHRVEEEHR 10414



 Score = 32.0 bits (71), Expect = 3.5
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 212  PHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGE--EDEDDVDVEEEEDEDEDDRR 269
            P  + Y+E    D   +  E +     E EE+ +E  E  E E+  D  EEE E+    R
Sbjct: 9088 PFEQPYYEEPDEDYEEIKVEAKKEVHEEWEEDFEEGQEYYEREEGYDEGEEEWEEAYQER 9147

Query: 270  TVDSIPEEEEEDEEE 284
             V  + +E  E+  E
Sbjct: 9148 EVIQVQKEVYEESHE 9162



 Score = 32.0 bits (71), Expect = 3.5
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 8/168 (4%)

Query: 129  DRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGE--KEDQFNGSPPRPQPRGPRTPP 186
            +R   H+     P  P P  P P+  +   PK    +  K+       P P P+  + PP
Sbjct: 9777 ERYEEHEEYITEPEKPIPVKPVPEEPVPTKPKAPPAKVLKKAVPEEKVPVPIPKKLKPPP 9836

Query: 187  GPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFE-PISPDRNSVPQEGQYSDEGEVEEEQQ 245
               P +  +     + +S  K E     E   + P+ P R  V +E       EV    +
Sbjct: 9837 PKVPEEPKKVFEEKIRISITKREKEQVTEPAAKVPMKPKR-VVAEEKVPVPRKEVAPPVR 9895

Query: 246  EEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEE--DEEEEGEEDEE 291
                E   +++ EE   E+E      + + EEEEE   EEEE   +EE
Sbjct: 9896 VP--EVPKELEPEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFITEEE 9941


>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member E isoform 1 [Homo sapiens]
          Length = 268

 Score = 58.2 bits (139), Expect = 5e-08
 Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 6/115 (5%)

Query: 215 EDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSI 274
           EDY E I      + Q+  Y D  + E+ +  + EE++D+   E++E+E+E++    +  
Sbjct: 129 EDYRESIF----ELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGY 184

Query: 275 PEEEEEDEEEEGEEDEEGEGDDGYEQISSDED-GIADLERETFKYPNFDVEYTAE 328
            EEEEE+EEE+ +EDE+ E + G E    +E+ G++ L +E  +    D +Y  E
Sbjct: 185 EEEEEEEEEEDEDEDED-EDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEE 238



 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 22/124 (17%)

Query: 193 DDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDE 252
           D ED+  P     D EE+     D  +    +  + P EG Y +E E EEE+ E+ +EDE
Sbjct: 149 DQEDNEAP-----DSEEEDDEDGDEDDEEEEENEAGPPEG-YEEEEEEEEEEDEDEDEDE 202

Query: 253 DDVDVEEEEDEDE------------DDRRTVDSIPEEEEEDEEEE----GEEDEEGEGDD 296
           D+   E  E E+E            D+    D + E EEE+EEEE    GE+ +    DD
Sbjct: 203 DEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDD 262

Query: 297 GYEQ 300
           G E+
Sbjct: 263 GEEE 266



 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 17/114 (14%)

Query: 217 YFEPISPDRNSVP----QEGQYSDEGEVEEEQQEEG-----EEDEDDVDVEEEEDEDEDD 267
           Y +    + N  P    ++ +  DE + EEE+ E G     EE+E++ + E+E++++++D
Sbjct: 144 YLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDED 203

Query: 268 RRTVDSIPEEEEE-------DEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
                 + E EEE        EE + EED++   ++G E+   +E G+   +R+
Sbjct: 204 -EAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRK 256



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 20/112 (17%)

Query: 192 DDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDE-----GEVEEE--- 243
           D DEDD        ++E +A   E Y E    +      E +  DE     GE EEE   
Sbjct: 165 DGDEDD------EEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGL 218

Query: 244 ---QQEEGEEDEDDVD-VEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEE 291
               +EE +++EDD D VEE E+E+E++   +    E+ + D E++GEE+++
Sbjct: 219 SYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRG--EKRKRDAEDDGEEEDD 268


>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
           family, member E isoform 2 [Homo sapiens]
          Length = 227

 Score = 58.2 bits (139), Expect = 5e-08
 Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 6/115 (5%)

Query: 215 EDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSI 274
           EDY E I      + Q+  Y D  + E+ +  + EE++D+   E++E+E+E++    +  
Sbjct: 88  EDYRESIF----ELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGY 143

Query: 275 PEEEEEDEEEEGEEDEEGEGDDGYEQISSDED-GIADLERETFKYPNFDVEYTAE 328
            EEEEE+EEE+ +EDE+ E + G E    +E+ G++ L +E  +    D +Y  E
Sbjct: 144 EEEEEEEEEEDEDEDED-EDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEE 197



 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 22/124 (17%)

Query: 193 DDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDE 252
           D ED+  P     D EE+     D  +    +  + P EG Y +E E EEE+ E+ +EDE
Sbjct: 108 DQEDNEAP-----DSEEEDDEDGDEDDEEEEENEAGPPEG-YEEEEEEEEEEDEDEDEDE 161

Query: 253 DDVDVEEEEDEDE------------DDRRTVDSIPEEEEEDEEEE----GEEDEEGEGDD 296
           D+   E  E E+E            D+    D + E EEE+EEEE    GE+ +    DD
Sbjct: 162 DEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDD 221

Query: 297 GYEQ 300
           G E+
Sbjct: 222 GEEE 225



 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 17/114 (14%)

Query: 217 YFEPISPDRNSVP----QEGQYSDEGEVEEEQQEEG-----EEDEDDVDVEEEEDEDEDD 267
           Y +    + N  P    ++ +  DE + EEE+ E G     EE+E++ + E+E++++++D
Sbjct: 103 YLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDED 162

Query: 268 RRTVDSIPEEEEE-------DEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
                 + E EEE        EE + EED++   ++G E+   +E G+   +R+
Sbjct: 163 -EAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRK 215



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 20/112 (17%)

Query: 192 DDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDE-----GEVEEE--- 243
           D DEDD        ++E +A   E Y E    +      E +  DE     GE EEE   
Sbjct: 124 DGDEDD------EEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGL 177

Query: 244 ---QQEEGEEDEDDVD-VEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEE 291
               +EE +++EDD D VEE E+E+E++   +    E+ + D E++GEE+++
Sbjct: 178 SYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRG--EKRKRDAEDDGEEEDD 227


>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
           family, member E isoform 3 [Homo sapiens]
          Length = 220

 Score = 58.2 bits (139), Expect = 5e-08
 Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 6/115 (5%)

Query: 215 EDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSI 274
           EDY E I      + Q+  Y D  + E+ +  + EE++D+   E++E+E+E++    +  
Sbjct: 81  EDYRESIF----ELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGY 136

Query: 275 PEEEEEDEEEEGEEDEEGEGDDGYEQISSDED-GIADLERETFKYPNFDVEYTAE 328
            EEEEE+EEE+ +EDE+ E + G E    +E+ G++ L +E  +    D +Y  E
Sbjct: 137 EEEEEEEEEEDEDEDED-EDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEE 190



 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 22/124 (17%)

Query: 193 DDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDE 252
           D ED+  P     D EE+     D  +    +  + P EG Y +E E EEE+ E+ +EDE
Sbjct: 101 DQEDNEAP-----DSEEEDDEDGDEDDEEEEENEAGPPEG-YEEEEEEEEEEDEDEDEDE 154

Query: 253 DDVDVEEEEDEDE------------DDRRTVDSIPEEEEEDEEEE----GEEDEEGEGDD 296
           D+   E  E E+E            D+    D + E EEE+EEEE    GE+ +    DD
Sbjct: 155 DEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDD 214

Query: 297 GYEQ 300
           G E+
Sbjct: 215 GEEE 218



 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 17/114 (14%)

Query: 217 YFEPISPDRNSVP----QEGQYSDEGEVEEEQQEEG-----EEDEDDVDVEEEEDEDEDD 267
           Y +    + N  P    ++ +  DE + EEE+ E G     EE+E++ + E+E++++++D
Sbjct: 96  YLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDED 155

Query: 268 RRTVDSIPEEEEE-------DEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
                 + E EEE        EE + EED++   ++G E+   +E G+   +R+
Sbjct: 156 -EAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRK 208



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 20/112 (17%)

Query: 192 DDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDE-----GEVEEE--- 243
           D DEDD        ++E +A   E Y E    +      E +  DE     GE EEE   
Sbjct: 117 DGDEDD------EEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGL 170

Query: 244 ---QQEEGEEDEDDVD-VEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEE 291
               +EE +++EDD D VEE E+E+E++   +    E+ + D E++GEE+++
Sbjct: 171 SYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRG--EKRKRDAEDDGEEEDD 220


>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
           [Homo sapiens]
          Length = 593

 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 26/164 (15%)

Query: 136 RDSPPPPPPPPPPPQPQ--PSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDD 193
           R   PP PP  PP + +  P   R P+ A  ++      +  R    G   P  P     
Sbjct: 24  RQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAAAAGLGHPASP---GG 80

Query: 194 DEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDED 253
            ED P      G +EEDA        P SP R       ++ ++   +E+ + + EE+E 
Sbjct: 81  SEDGP-----PGSEEEDAAREGT---PGSPGRGREGPGEEHFEDMASDEDMKPKWEEEEM 132

Query: 254 DVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDG 297
           + D+ E+E+E             EEE+ E+EE EEDEEG G  G
Sbjct: 133 EEDLGEDEEE-------------EEEDYEDEEEEEDEEGLGPPG 163


>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
          Length = 770

 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 10/169 (5%)

Query: 183 RTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEE 242
           R+PP PP    +  D    PV  +K E+     D  +    +R +   E   ++ G   E
Sbjct: 221 RSPPRPPRERFELGDGRK-PVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSE 279

Query: 243 EQQEEGEEDEDD----VDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGY 298
           E++EE EE+E++     + EEEE+E+E++     S  EE  E   EE  E+E  E ++  
Sbjct: 280 EEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEE-- 337

Query: 299 EQISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVP 347
                +E+ +  +    F   + + E   E++    P +    + + VP
Sbjct: 338 ---RENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVP 383


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.134    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,232,617
Number of Sequences: 37866
Number of extensions: 3044922
Number of successful extensions: 88906
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 1177
Number of HSP's that attempted gapping in prelim test: 26650
Number of HSP's gapped (non-prelim): 26793
length of query: 1147
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1034
effective length of database: 13,968,660
effective search space: 14443594440
effective search space used: 14443594440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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