Guide to the Human Genome
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Name: SNX14 Sequence: fasta or formatted (893aa) NCBI GI: 24797143
Description:

sorting nexin 14 isoform b

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [946aa] sorting nexin 14 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         33           2
 C cysteine            1.9         17           1
 D aspartate           4.6         41           2
 E glutamate           8.8         79           2
 F phenylalanine       5.7         51           2
 G glycine             3.8         34           2
 H histidine           2.1         19           2
 I isoleucine          5.8         52           2
 K lysine              7.5         67           2
 L leucine            13.1        117           3
 M methionine          2.4         21           2
 N asparagine          4.1         37           2
 P proline             5.9         53           2
 Q glutamine           4.7         42           2
 R arginine            5.4         48           2
 S serine              6.0         54           2
 T threonine           4.0         36           2
 V valine              6.2         55           2
 W tryptophan          0.8          7           1
 Y tyrosine            3.4         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sorting nexin 14 isoform b 
SNX14                 0.984   sorting nexin 14 isoform a 
SNX25                 0.024   sorting nexin 25 
SNX13                 0.018   sorting nexin 13 
SNX19                 0.017   sorting nexin 19 
SGK3                  0.016   serum/glucocorticoid regulated kinase 3 isoform 2 [H...
SGK3                  0.016   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.016   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PXK                   0.015   PX domain containing serine/threonine kinase 
SNX9                  0.014   sorting nexin 9 
SNX16                 0.013   sorting nexin 16 isoform a 
SNX16                 0.013   sorting nexin 16 isoform a 
SNX29                 0.012   sorting nexin 29 
SNX8                  0.011   sorting nexin 8 
SNX7                  0.011   sorting nexin 7 isoform b 
SNX7                  0.011   sorting nexin 7 isoform a 
SNX2                  0.010   sorting nexin 2 
AXIN1                 0.010   axin 1 isoform a 
AXIN1                 0.010   axin 1 isoform b 
SNX11                 0.010   sorting nexin 11 
SNX11                 0.010   sorting nexin 11 
SNX30                 0.008   sorting nexin family member 30 
NISCH                 0.008   nischarin 
SNX1                  0.008   sorting nexin 1 isoform c 
SNX1                  0.008   sorting nexin 1 isoform a 
SNX1                  0.008   sorting nexin 1 isoform b 
AKAP10                0.007   A-kinase anchor protein 10 precursor 
KIF16B                0.006   kinesin-like motor protein C20orf23 
RGS2                  0.006   regulator of G-protein signaling 2, 24kDa 
SNX18                 0.006   sorting nexin 18 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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