SNX20 14404

Name: SNX20	Sequence: fasta or formatted (102aa)		NCBI GI: 222352102
Description: sorting nexin 20 isoform 3		Referenced in: Additional Host Defense Functions ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [129aa] sorting nexin 20 isoform 2 alt prot [316aa] sorting nexin 20 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 9 1 C cysteine 2.9 3 1 D aspartate 3.9 4 1 E glutamate 5.9 6 2 F phenylalanine 2.0 2 1 G glycine 6.9 7 1 H histidine 4.9 5 1 I isoleucine 2.9 3 1 K lysine 4.9 5 1 L leucine 5.9 6 2 M methionine 2.9 3 1 N asparagine 2.0 2 1 P proline 11.8 12 1 Q glutamine 6.9 7 2 R arginine 4.9 5 1 S serine 8.8 9 2 T threonine 7.8 8 2 V valine 2.9 3 1 W tryptophan 2.0 2 1 Y tyrosine 1.0 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 20 isoform 3 SNX20 0.913 sorting nexin 20 isoform 2 SNX20 0.913 sorting nexin 20 isoform 1 SNX21 0.041 sorting nexin 21 isoform d SNX21 0.041 sorting nexin 21 isoform a SNX21 0.041 sorting nexin 21 isoform b SYN1 0.041 synapsin I isoform Ia SYN1 0.041 synapsin I isoform Ib SPTAN1 0.026 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.026 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... COL4A3 0.026 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.026 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.026 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.026 alpha 3 type IV collagen isoform 1 precursor AKNA 0.026 AT-hook transcription factor DBX1 0.026 developing brain homeobox 1 UTF1 0.026 undifferentiated embryonic cell transcription factor... MEOX2 0.026 mesenchyme homeobox 2 C2orf55 0.026 hypothetical protein LOC343990 SNX21 0.026 sorting nexin 21 isoform c LOC339742 0.021 PREDICTED: hypothetical protein LOC100134240 0.021 PREDICTED: hypothetical protein LOC100133638 0.021 PREDICTED: hypothetical protein LOC339742 0.021 PREDICTED: hypothetical protein C1orf127 0.015 hypothetical protein LOC148345 DCAF10 0.015 WD repeat domain 32 LOC100290189 0.015 PREDICTED: hypothetical protein XP_002347700 LOC100289086 0.015 PREDICTED: hypothetical protein XP_002344149 CBFA2T3 0.015 myeloid translocation gene on chromosome 16 isoform ... CBFA2T3 0.015 myeloid translocation gene on chromosome 16 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.