Guide to the Human Genome
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Name: TICAM2 Sequence: fasta or formatted (235aa) NCBI GI: 33386674
Description:

toll-like receptor adaptor molecule 2

Referenced in:

Toll-like Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         11           1
 C cysteine            1.7          4           1
 D aspartate           4.7         11           2
 E glutamate          10.2         24           3
 F phenylalanine       5.1         12           1
 G glycine             5.1         12           1
 H histidine           2.6          6           1
 I isoleucine          5.1         12           2
 K lysine              4.7         11           2
 L leucine             8.5         20           3
 M methionine          2.6          6           1
 N asparagine          6.4         15           2
 P proline             4.7         11           1
 Q glutamine           6.4         15           2
 R arginine            5.1         12           1
 S serine              7.7         18           1
 T threonine           6.4         15           2
 V valine              5.1         12           1
 W tryptophan          1.7          4           1
 Y tyrosine            1.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   toll-like receptor adaptor molecule 2 
TICAM1                0.094   toll-like receptor adaptor molecule 1 
TLR10                 0.026   toll-like receptor 10 precursor 
TLR10                 0.026   toll-like receptor 10 precursor 
TLR6                  0.020   toll-like receptor 6 
TLR2                  0.020   toll-like receptor 2 
TLR1                  0.018   toll-like receptor 1 
TIRAP                 0.018   Toll-interleukin 1 receptor domain-containing adapto...
TIRAP                 0.018   Toll-interleukin 1 receptor domain-containing adapto...
TLR5                  0.015   toll-like receptor 5 
FBXO31                0.015   F-box protein 31 
ZEB1                  0.015   zinc finger E-box binding homeobox 1 isoform a [Hom...
ZEB1                  0.015   zinc finger E-box binding homeobox 1 isoform b [Hom...
SH3BGR                0.013   SH3-binding domain and glutamic acid-rich protein is...
SH3BGR                0.013   SH3-binding domain and glutamic acid-rich protein iso...
ARMC3                 0.009   armadillo repeat containing 3 
SLC24A1               0.009   solute carrier family 24 (sodium/potassium/calcium ex...
ANKRD34C              0.007   ankyrin repeat domain 34C 
ANKRD34C              0.007   PREDICTED: ankyrin repeat domain 34C 
ANKRD34C              0.007   PREDICTED: ankyrin repeat domain 34C 
ANKRD34C              0.007   PREDICTED: ankyrin repeat domain 34C 
SUPT5H                0.007   suppressor of Ty 5 homolog isoform b 
SUPT5H                0.007   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.007   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.007   suppressor of Ty 5 homolog isoform a 
ZCWPW1                0.007   zinc finger, CW type with PWWP domain 1 
USHBP1                0.007   Usher syndrome 1C binding protein 1 
VCP                   0.007   valosin-containing protein 
C3orf44               0.007   hypothetical protein LOC131831 
ACBD5                 0.007   acyl-Coenzyme A binding domain containing 5 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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