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Search of human proteins with 33356556
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo
sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo ... 457 e-129
gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo s... 421 e-118
gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo ... 377 e-105
gi|4502073 amelogenin, Y-linked precursor [Homo sapiens] 367 e-102
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 73 1e-13
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 73 2e-13
gi|117938768 GNAS complex locus alex [Homo sapiens] 62 3e-10
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 60 1e-09
gi|50345997 E1A binding protein p300 [Homo sapiens] 60 2e-09
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 59 3e-09
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 59 3e-09
gi|195232763 ADAM metallopeptidase domain 29 preproprotein [Homo... 59 4e-09
gi|195232761 ADAM metallopeptidase domain 29 preproprotein [Homo... 59 4e-09
gi|195232759 ADAM metallopeptidase domain 29 preproprotein [Homo... 59 4e-09
gi|73765552 ADAM metallopeptidase domain 29 preproprotein [Homo ... 59 4e-09
gi|153792074 proline rich 12 [Homo sapiens] 59 4e-09
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 58 5e-09
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 58 6e-09
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 57 8e-09
gi|114431236 zinc finger protein 462 [Homo sapiens] 55 4e-08
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 55 5e-08
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 55 5e-08
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 54 7e-08
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 54 7e-08
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 54 7e-08
gi|146134388 YLP motif containing 1 [Homo sapiens] 54 7e-08
gi|150417989 cyclin K isoform 1 [Homo sapiens] 53 2e-07
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 53 2e-07
gi|210032580 SET domain containing 1B [Homo sapiens] 52 3e-07
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 52 3e-07
>gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo
sapiens]
Length = 205
Score = 457 bits (1177), Expect = e-129
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIR 60
MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIR
Sbjct: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIR 60
Query: 61 PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ 120
PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ
Sbjct: 61 PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ 120
Query: 121 HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 180
HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP
Sbjct: 121 HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 180
Query: 181 LPPMLPDLTLEAWPSTDKTKREEVD 205
LPPMLPDLTLEAWPSTDKTKREEVD
Sbjct: 181 LPPMLPDLTLEAWPSTDKTKREEVD 205
>gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo
sapiens]
Length = 191
Score = 421 bits (1083), Expect = e-118
Identities = 191/205 (93%), Positives = 191/205 (93%), Gaps = 14/205 (6%)
Query: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIR 60
MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYE VLTPLKWYQSIR
Sbjct: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYE--------------VLTPLKWYQSIR 46
Query: 61 PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ 120
PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ
Sbjct: 47 PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ 106
Query: 121 HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 180
HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP
Sbjct: 107 HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 166
Query: 181 LPPMLPDLTLEAWPSTDKTKREEVD 205
LPPMLPDLTLEAWPSTDKTKREEVD
Sbjct: 167 LPPMLPDLTLEAWPSTDKTKREEVD 191
>gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo
sapiens]
Length = 175
Score = 377 bits (968), Expect = e-105
Identities = 175/205 (85%), Positives = 175/205 (85%), Gaps = 30/205 (14%)
Query: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIR 60
MGTWILFACLLGAAFAMP VLTPLKWYQSIR
Sbjct: 1 MGTWILFACLLGAAFAMP------------------------------VLTPLKWYQSIR 30
Query: 61 PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ 120
PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ
Sbjct: 31 PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ 90
Query: 121 HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 180
HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP
Sbjct: 91 HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 150
Query: 181 LPPMLPDLTLEAWPSTDKTKREEVD 205
LPPMLPDLTLEAWPSTDKTKREEVD
Sbjct: 151 LPPMLPDLTLEAWPSTDKTKREEVD 175
>gi|4502073 amelogenin, Y-linked precursor [Homo sapiens]
Length = 192
Score = 367 bits (941), Expect = e-102
Identities = 169/206 (82%), Positives = 179/206 (86%), Gaps = 15/206 (7%)
Query: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQS-I 59
MGTWILFACL+GAAFAMPLPPHPGHPGYINFSYE VLTPLKWYQS I
Sbjct: 1 MGTWILFACLVGAAFAMPLPPHPGHPGYINFSYE--------------VLTPLKWYQSMI 46
Query: 60 RPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPG 119
RPPY SYGYEPMGGWLHHQIIPV+SQQHP THTLQ HHHIPVVPAQQP + QQ +MPVPG
Sbjct: 47 RPPYSSYGYEPMGGWLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPG 106
Query: 120 QHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQ 179
Q SMTP QHHQPNLP PAQQP+QPQPVQPQPHQPMQPQPPV PMQPL PQPPLPPMFP++
Sbjct: 107 QQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLR 166
Query: 180 PLPPMLPDLTLEAWPSTDKTKREEVD 205
PLPP+LPDL LEAWP+TDKTK+EEVD
Sbjct: 167 PLPPILPDLHLEAWPATDKTKQEEVD 192
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 73.2 bits (178), Expect = 1e-13
Identities = 44/114 (38%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQP--------VIPQQPMMPVPGQHSMTPIQHHQPN 132
PV ++ P LQP + ++ QP + P+QP +P PGQ + H QPN
Sbjct: 520 PVFPRERPVRPALQPPGPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPT--HTQPN 577
Query: 133 LP----PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLP 182
L PP P+QPQP QPQ P Q QPP P PPQ PP P Q P
Sbjct: 578 LQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPP 631
Score = 52.4 bits (124), Expect = 3e-07
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 80 IPVLSQQHPPTHT---LQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPP 136
+P Q PTHT LQ H P+ P QP PQQP P QH P+ PP
Sbjct: 562 LPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQ-PQQPQQ-------QPPPQHQPPHQPPH 613
Query: 137 AQQP-YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLP 182
P +QP P P H P H +PP PPL PM Q P
Sbjct: 614 QPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPP-PPLMPMSQPQFRP 659
Score = 50.8 bits (120), Expect = 8e-07
Identities = 34/95 (35%), Positives = 42/95 (44%), Gaps = 27/95 (28%)
Query: 97 HHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP----YQPQPVQP---- 148
H ++P Q PV+PQ P P PPP QQP +QPQP+QP
Sbjct: 304 HRPALLPTQPPVVPQAP----------------PPPPPPPQQQPIRSLFQPQPLQPLLPV 347
Query: 149 -QPHQPMQPQPPVHPMQPLPPQPPL--PPMFPMQP 180
PH P PQ P Q P+ + PP+ P QP
Sbjct: 348 QHPHHPSPPQGMHMPPQLETPRMMMTPPPVTPQQP 382
Score = 45.8 bits (107), Expect = 3e-05
Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 25/145 (17%)
Query: 57 QSIRPPYPSYGYEPMGGWLHHQII-PVLSQQHPPTHTLQPHHHIP-------VVPAQQPV 108
Q+ PP P +P+ Q + P+L QHP + H+P ++ PV
Sbjct: 318 QAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETPRMMMTPPPV 377
Query: 109 IPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQP-----HQPMQPQPPVHPM 163
PQQP ++ H + + P Q P P P QP+P P P+ P H
Sbjct: 378 TPQQPK-------NIHINPHFKGTVVTPVQVPLLPVPSQPRPAVGPQRFPGPPEFPQHTP 430
Query: 164 QPLPPQPPLPPMFPMQ-----PLPP 183
P+P PP P+Q P PP
Sbjct: 431 GPVPNSFSQPPRLPLQDQWRAPPPP 455
Score = 43.5 bits (101), Expect = 1e-04
Identities = 47/142 (33%), Positives = 53/142 (37%), Gaps = 23/142 (16%)
Query: 60 RPPYPSYGYEPMGGWLH------HQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQP 113
+P P++ + G LH HQ P QQ PP QP H P P Q P Q
Sbjct: 567 QPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQH-QPPHQPPHQPPPQHQPPPQH 625
Query: 114 MMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPH-QPMQPQPPVHPMQPLPPQPPL 172
P QH HH PPP QP Q +PH Q QPQ MQ P + L
Sbjct: 626 PPQHPPQHQHHHHHHHLSVPPPPLMPMSQP---QFRPHVQTAQPQASSSRMQ-CPQRQGL 681
Query: 173 -----------PPMFPMQPLPP 183
PM MQP P
Sbjct: 682 RHNTTSQNVSKRPMQQMQPTAP 703
Score = 40.8 bits (94), Expect = 8e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 126 IQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPP 183
++ H+P L P Q P PQ P P P Q QP QP P QP LP P P PP
Sbjct: 301 MKDHRPALLP-TQPPVVPQAPPPPPPPPQQ-QPIRSLFQPQPLQPLLPVQHPHHPSPP 356
Score = 40.4 bits (93), Expect = 0.001
Identities = 28/104 (26%), Positives = 38/104 (36%), Gaps = 7/104 (6%)
Query: 77 HQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPP 136
HQ P QHPP H HHH +P P+MP+ +Q QP
Sbjct: 619 HQPPPQHPPQHPPQHQHHHHHH-------HLSVPPPPLMPMSQPQFRPHVQTAQPQASSS 671
Query: 137 AQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 180
Q Q Q ++ + P+ MQP P+ P+ P
Sbjct: 672 RMQCPQRQGLRHNTTSQNVSKRPMQQMQPTAPRNSNLRELPIAP 715
Score = 38.5 bits (88), Expect = 0.004
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Query: 130 QPNLPPPAQQPYQPQP--------VQPQPHQPMQP-QPPVHPMQP----LPPQPPLPPMF 176
QP + P A P P P QPQP QP+ P Q P HP P +PPQ P M
Sbjct: 312 QPPVVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETPRM- 370
Query: 177 PMQPLPPMLP 186
M PP+ P
Sbjct: 371 -MMTPPPVTP 379
Score = 37.7 bits (86), Expect = 0.007
Identities = 41/149 (27%), Positives = 56/149 (37%), Gaps = 43/149 (28%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVV-PAQQPV--IPQQPMMPV-----PG-----QHSMTPIQ 127
P ++ Q P + PH VV P Q P+ +P QP V PG QH+ P+
Sbjct: 375 PPVTPQQPKNIHINPHFKGTVVTPVQVPLLPVPSQPRPAVGPQRFPGPPEFPQHTPGPVP 434
Query: 128 HH-----------QPNLPPPAQ-----------QPYQPQPVQPQPHQPMQPQPP---VHP 162
+ Q PPP Q +P P + + P P PP ++
Sbjct: 435 NSFSQPPRLPLQDQWRAPPPPQDRDPFFLGVSGEPRFPSHLFLEQRSPPPPPPPPTLLNS 494
Query: 163 MQPLPPQPPLP-----PMFPMQPLPPMLP 186
P+P Q PLP P F Q P+ P
Sbjct: 495 SHPVPTQSPLPFTQPGPAFNQQGQQPVFP 523
Score = 36.6 bits (83), Expect = 0.015
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 151 HQP--MQPQPPVHPMQPLPPQPP-----LPPMFPMQPLPPMLP 186
H+P + QPPV P P PP PP + +F QPL P+LP
Sbjct: 304 HRPALLPTQPPVVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLP 346
Score = 28.5 bits (62), Expect = 4.2
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 25/130 (19%)
Query: 78 QIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQ----QPMMPVPGQH------------ 121
+++ L+QQ + P P +Q + P P++P PG
Sbjct: 822 ELLERLAQQQQQLYAPPP----PAEQEEQALSPSPTNGNPLLPFPGAQVRQNVKNRLLVK 877
Query: 122 ----SMTPIQHHQPN-LPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMF 176
S++ +Q N +P A YQ Q ++ H P QPL P+ P
Sbjct: 878 NQDVSISNVQPKTSNFVPSSANMQYQGQQMKALKHLRQTRTVPQSQTQPLHKVLPIKPAD 937
Query: 177 PMQPLPPMLP 186
+P P P
Sbjct: 938 VEEPAVPQTP 947
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 72.8 bits (177), Expect = 2e-13
Identities = 44/99 (44%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 147
PP + P +P P PV P PM PVP M P+ P PP A+ P P +
Sbjct: 286 PPGPRMAP---VPPWPPMAPVPPWPPMAPVPTGPPMAPV----PPGPPMARVPPGPPMAR 338
Query: 148 PQPHQPMQPQPPVHPMQPLPPQP---PLPPMFPMQPLPP 183
P PM P PP PM PLPP P PLPP PM PLPP
Sbjct: 339 VPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPP 377
Score = 71.6 bits (174), Expect = 4e-13
Identities = 43/105 (40%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 147
PP + P +P P PV P PM PVP M P+ P PP A P P +
Sbjct: 277 PPGSRMAP---VPPGPRMAPVPPWPPMAPVPPWPPMAPV----PTGPPMAPVPPGPPMAR 329
Query: 148 PQPHQPMQPQPPVHPMQPLPPQPPL------PPMFPMQPLPPMLP 186
P PM PP PM PLPP PP+ PPM P+ P PPM P
Sbjct: 330 VPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAP 374
Score = 67.8 bits (164), Expect = 6e-12
Identities = 44/115 (38%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 147
PP + P I +P PV P M PVP M P+ P P P P P P
Sbjct: 256 PPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTG 315
Query: 148 PQ-----PHQPMQPQPPVHPMQPLPPQPP---LPPMFPMQPLPPMLPDLTLEAWP 194
P P PM PP PM +PP PP LPP PM PLPP P L P
Sbjct: 316 PPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGP 370
Score = 66.6 bits (161), Expect = 1e-11
Identities = 39/109 (35%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 89 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQP----Q 144
P + P + +P + P+ P PM PVP M P+ P P P P
Sbjct: 248 PVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWP 307
Query: 145 PVQPQP-HQPMQPQPPVHPMQPLPPQPPL------PPMFPMQPLPPMLP 186
P+ P P PM P PP PM +PP PP+ PPM P+ P PPM P
Sbjct: 308 PMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAP 356
Score = 63.5 bits (153), Expect = 1e-10
Identities = 40/98 (40%), Positives = 48/98 (48%), Gaps = 16/98 (16%)
Query: 97 HHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQP----QPVQPQPHQ 152
H +P +P + PV+P PM P P M P+ P P P P P PV P P
Sbjct: 236 HLVPQLP-RPPVLPVPPMPPRP---PMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPR- 290
Query: 153 PMQPQPPVHPMQPLPPQPPL------PPMFPMQPLPPM 184
M P PP PM P+PP PP+ PPM P+ P PPM
Sbjct: 291 -MAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPM 327
Score = 58.9 bits (141), Expect = 3e-09
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 107 PVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPL 166
P +P+ P++PVP P+ P +P P + P P P PM P PP M P+
Sbjct: 239 PQLPRPPVLPVP------PMPPRPPMVPMPPRPPIAPMP-------PMAPVPPGSRMAPV 285
Query: 167 PPQP---PLPPMFPMQPLPPMLP 186
PP P P+PP PM P+PP P
Sbjct: 286 PPGPRMAPVPPWPPMAPVPPWPP 308
Score = 51.2 bits (121), Expect = 6e-07
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 131 PNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPP 183
P L P PQ +P P P+ P PP PM P+PP+PP+ PM PM P+PP
Sbjct: 227 PALDPALCVHLVPQLPRP-PVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPP 278
Score = 28.1 bits (61), Expect = 5.5
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Query: 127 QHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLP-------PQPP 171
Q +P L P QQ +P ++ + Q PQ V QP PQPP
Sbjct: 85 QQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPP 136
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 62.4 bits (150), Expect = 3e-10
Identities = 52/151 (34%), Positives = 69/151 (45%), Gaps = 36/151 (23%)
Query: 54 KWYQSIRP----PYPSYGYEPMGGWLHHQIIPVLSQQHP-PTHTLQPHHHIPVVPAQQPV 108
+W + + P YP G +P+ P Q+ P P LQP QP+
Sbjct: 298 RWKEPLMPRREEKYPLRGTDPLP--------PGQPQRIPLPGQPLQP----------QPI 339
Query: 109 I-PQQPM-MPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPL 166
+ P QP +P PGQH H +P P Q P PQP+ P P +P+ PQP P +PL
Sbjct: 340 LTPGQPQKIPTPGQHQPILTPGHSQPIPTPGQ-PLPPQPI-PTPGRPLTPQPIPTPGRPL 397
Query: 167 PPQP------PL---PPMFPMQPLPPMLPDL 188
PQP PL PP+ ++P PM P L
Sbjct: 398 TPQPIQMPGRPLRLPPPLRLLRPGQPMSPQL 428
Score = 55.5 bits (132), Expect = 3e-08
Identities = 37/101 (36%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 99 IPVVPAQQPVIPQQPMMP----VPGQHSMTPIQ-HHQPNLPPPAQQPYQPQPVQPQPHQP 153
+P Q+ +P QP+ P PGQ P HQP L P QP P P QP
Sbjct: 319 LPPGQPQRIPLPGQPLQPQPILTPGQPQKIPTPGQHQPILTPGHSQPI------PTPGQP 372
Query: 154 MQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP 194
+ PQP P +PL PQP P P+ P P +P L P
Sbjct: 373 LPPQPIPTPGRPLTPQPIPTPGRPLTPQPIQMPGRPLRLPP 413
Score = 53.1 bits (126), Expect = 2e-07
Identities = 46/121 (38%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 78 QIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQ---PMMPVPGQHSMTPIQHHQPNLP 134
Q IP Q P L P H P+ QP+ PQ P P+ Q TP +P P
Sbjct: 346 QKIPTPGQHQP---ILTPGHSQPIPTPGQPLPPQPIPTPGRPLTPQPIPTP---GRPLTP 399
Query: 135 PPAQQPYQPQPVQP-----QPHQPMQPQPPVHPMQPLP-PQPPLPPMFP------MQPLP 182
P Q P +P + P +P QPM PQ + Q LP PQP LPP P +QPLP
Sbjct: 400 QPIQMPGRPLRLPPPLRLLRPGQPMSPQ--LRQTQGLPLPQPLLPPGQPKSAGRPLQPLP 457
Query: 183 P 183
P
Sbjct: 458 P 458
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 60.5 bits (145), Expect = 1e-09
Identities = 46/127 (36%), Positives = 55/127 (43%), Gaps = 18/127 (14%)
Query: 80 IPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHH---------- 129
IP+L+ P L H + +P Q PV P P + P HH
Sbjct: 884 IPLLAVAPPGVAALSIHSAVAQLPGQ-PVYPAA--FPQMAPTDVPPSPHHTVQNMRATPP 940
Query: 130 QPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLP--PMFPMQPLPPMLPD 187
QP LPP P PQPV P P + PQP + P PPQP LP PM P QP+ P P
Sbjct: 941 QPALPPQPTLP--PQPVLP-PQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPA 997
Query: 188 LTLEAWP 194
L + P
Sbjct: 998 LPVRPEP 1004
Score = 59.3 bits (142), Expect = 2e-09
Identities = 46/123 (37%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQ-PV 146
PP TL P PV+P Q P +P QP++P P+ QP LPP P QP PV
Sbjct: 945 PPQPTLPPQ---PVLPPQ-PTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPALPV 1000
Query: 147 QP---QPHQPMQPQPPVHP------MQPLP------PQPPLPPMFPMQPLPPMLPDLTLE 191
+P QPH P Q P P P P Q P P+ P L P LP++ L
Sbjct: 1001 RPEPLQPHLPEQAAPAATPGSQILLGHPAPYAVDVAAQVPTVPVPPAAVLSPPLPEVLLP 1060
Query: 192 AWP 194
A P
Sbjct: 1061 AAP 1063
Score = 58.9 bits (141), Expect = 3e-09
Identities = 41/101 (40%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 89 PTHTLQPHHHIPVVPA--QQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPV 146
P HT+Q P PA QP +P QP++P Q ++ P QP LPP +P PQPV
Sbjct: 928 PHHTVQNMRATPPQPALPPQPTLPPQPVLPP--QPTLPP----QPVLPPQPTRP--PQPV 979
Query: 147 QPQPHQPMQPQPPVHPMQPLPPQP-PLPPMFPMQPLPPMLP 186
P P + PQP + P LP +P PL P P Q P P
Sbjct: 980 LP-PQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPAATP 1019
Score = 58.5 bits (140), Expect = 4e-09
Identities = 44/115 (38%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 85 QQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQ--QPYQ 142
QQ PP P +P V A QPV+P QP+ P H P L P +Q P Q
Sbjct: 729 QQPPPLAQPTP---LPQVLAPQPVVPLQPVPP-----------HLPPYLAPASQVGAPAQ 774
Query: 143 PQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPM---QPLPPMLPDLTLEAWP 194
+P+Q P P+QP V P +PP P +PP+ P+ LPP LPDL P
Sbjct: 775 LKPLQ-MPQAPLQPLAQVPPQ--MPPIPVVPPITPLAGIDGLPPALPDLPTATVP 826
Score = 54.3 bits (129), Expect = 7e-08
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 105 QQPVI-PQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPM 163
QQP P P+ VP +Q H P+ P + P P P P P P QP PP
Sbjct: 673 QQPTAAPGLPVGSVPAPACPPSLQQHFPD-PAMSFAPVLPPPSTPMPTGPGQPAPPGQQP 731
Query: 164 QPLPPQPPLP------PMFPMQPLPPMLP 186
PL PLP P+ P+QP+PP LP
Sbjct: 732 PPLAQPTPLPQVLAPQPVVPLQPVPPHLP 760
Score = 46.2 bits (108), Expect = 2e-05
Identities = 39/136 (28%), Positives = 51/136 (37%), Gaps = 20/136 (14%)
Query: 79 IIPVLSQQHPPTHTLQPHH-----HIPVVPAQQP---VIPQQPM------MPVPGQHSMT 124
I+P L+ PP P H P P P ++P P + PG +++
Sbjct: 839 ILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALS 898
Query: 125 PIQHHQPNLP-----PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQ 179
I LP P A P V P PH +Q P LPPQP LPP +
Sbjct: 899 -IHSAVAQLPGQPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLP 957
Query: 180 PLPPMLPDLTLEAWPS 195
P P + P L P+
Sbjct: 958 PQPTLPPQPVLPPQPT 973
Score = 43.5 bits (101), Expect = 1e-04
Identities = 38/140 (27%), Positives = 53/140 (37%), Gaps = 11/140 (7%)
Query: 52 PLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQ 111
P+ Q + P P Y Q+ P+ Q P LQP +P PV+P
Sbjct: 748 PVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAP----LQPLAQVPPQMPPIPVVP- 802
Query: 112 QPMMPVPGQHSMTPIQHHQPNL---PPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQ--PL 166
P+ P+ G + P P P P Q + P + P P+ P P P+Q L
Sbjct: 803 -PITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKL 861
Query: 167 PPQPPLPPMFPMQPLPPMLP 186
P P P P + + P P
Sbjct: 862 PHPPGAPLAMPCRTIVPNAP 881
Score = 37.0 bits (84), Expect = 0.012
Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 20/106 (18%)
Query: 83 LSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPY- 141
L+ + + L H P+ Q V+ P P P S + LPPPA +P
Sbjct: 1426 LTSELETSQPLAETHEAPLA-VQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEPSP 1484
Query: 142 ---QPQPV--QPQPHQP-----------MQPQPPVHPMQPLPPQPP 171
PQP QP P P P PP+ P +PPQPP
Sbjct: 1485 HSGTPQPALGQPAPLLPAAVGAVSLATSQLPSPPLGP--TVPPQPP 1528
Score = 31.6 bits (70), Expect = 0.49
Identities = 25/81 (30%), Positives = 28/81 (34%)
Query: 103 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHP 162
PAQ P PV Q + + QP P P P P Q P P +
Sbjct: 647 PAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPAMSF 706
Query: 163 MQPLPPQPPLPPMFPMQPLPP 183
LPP P P QP PP
Sbjct: 707 APVLPPPSTPMPTGPGQPAPP 727
Score = 30.8 bits (68), Expect = 0.84
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 114 MMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPP 168
+ P Q +P + P +P Q Y Q QP P +P +P+ H + P P
Sbjct: 550 LQPKEQQDVGSPDKARGPPVPLQVQVTYHAQAGQPGPPEPEEPEADQHLLPPTLP 604
Score = 29.6 bits (65), Expect = 1.9
Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 2/90 (2%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 147
PP L P ++PA ++PQ P S+ + L PPA P P
Sbjct: 1045 PPAAVLSPPLPEVLLPAAPELLPQFPSSLATVSASVQSVPTQTATLLPPANPPLPGGPGI 1104
Query: 148 PQPHQPMQPQPPVHPMQPLPPQPPLPPMFP 177
P + Q V P+Q PP P
Sbjct: 1105 ASPCPTV--QLTVEPVQEEQASQDKPPGLP 1132
Score = 27.3 bits (59), Expect = 9.3
Identities = 34/119 (28%), Positives = 41/119 (34%), Gaps = 32/119 (26%)
Query: 100 PVVPAQQPV--IPQQPMMP----VPGQHSMTPIQHHQPNLP-----------PPAQQPYQ 142
P+ P+ PV +PQ P +P S T Q P P P A+
Sbjct: 1383 PLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHEA 1442
Query: 143 PQPVQPQPH--QPMQPQPPVH-------PMQPLPPQPPLPPMFPMQPLP------PMLP 186
P VQP P P P P +PLPP P P P P P+LP
Sbjct: 1443 PLAVQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEPSPHSGTPQPALGQPAPLLP 1501
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 59.7 bits (143), Expect = 2e-09
Identities = 48/138 (34%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 81 PVLSQQHP---PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPA 137
P L Q P P+ T PHH P + AQQP P PVP +M P Q PPP
Sbjct: 825 PALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPA-PVPTPPAMPPGPQSQALHPPPR 883
Query: 138 QQPYQPQ---PVQPQPHQPMQPQPPVHPMQPLPPQ-------PPLPPMFPMQPLPPM-LP 186
Q P P P Q QP P P QP Q P P+ P QP P+ P
Sbjct: 884 QTPTPPTTQLPQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATPLSQP 943
Query: 187 DLTLEAW----PSTDKTK 200
+++E PST T+
Sbjct: 944 AVSIEGQVSNPPSTSSTE 961
Score = 52.8 bits (125), Expect = 2e-07
Identities = 49/146 (33%), Positives = 61/146 (41%), Gaps = 17/146 (11%)
Query: 61 PPYPSYGYEPMG-GWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPG 119
P PS G P+ + PV S PP + H H P +P QP + Q PVP
Sbjct: 781 PLAPSSGQAPVSQAQMSSSSCPVNSPIMPPG-SQGSHIHCPQLP--QPALHQNSPSPVP- 836
Query: 120 QHSMTPIQHHQPNLPPPAQQPYQ--PQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFP 177
S TP HH P Q P P PV P P P P + P P Q P PP
Sbjct: 837 --SRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMP--PGPQSQALHPPPRQTPTPPTTQ 892
Query: 178 M-QPLPPMLPDLTLEAWPSTDKTKRE 202
+ Q + P LP A PS D+ +++
Sbjct: 893 LPQQVQPSLP-----AAPSADQPQQQ 913
Score = 38.9 bits (89), Expect = 0.003
Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 20/99 (20%)
Query: 98 HIPVVPA--QQPVIPQQ----------PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQP 145
+IP+ P+ Q PV Q P+MP Q S H P LP PA P P
Sbjct: 779 NIPLAPSSGQAPVSQAQMSSSSCPVNSPIMPPGSQGSHI----HCPQLPQPALHQNSPSP 834
Query: 146 VQPQPHQPMQPQPPVHPMQP----LPPQPPLPPMFPMQP 180
V + P P + QP +P P PP P P
Sbjct: 835 VPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMPPGP 873
Score = 38.5 bits (88), Expect = 0.004
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 108 VIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQP----PVH-- 161
V+ QQ +P P + T QP P Q QPQP P P P+ PV
Sbjct: 1840 VVGQQQGLPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQG 1899
Query: 162 --PMQPLPPQPPLPPMFPMQPLPPMLPDLTLE 191
Q PP PP P+ PP ++ ++
Sbjct: 1900 KAAGQVTPPTPPQTAQPPLPGPPPAAVEMAMQ 1931
Score = 37.4 bits (85), Expect = 0.009
Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Query: 93 LQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQH------HQPNLPPPAQQPY-QPQP 145
LQ PV P P+ PQQ M+P Q Q +Q P P P Q QP
Sbjct: 2265 LQQQMGSPVQP--NPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQP 2322
Query: 146 VQPQPHQPMQPQPPVHPMQPLPPQP 170
P MQPQP H + P P
Sbjct: 2323 PHSSPSPRMQPQPSPHHVSPQTSSP 2347
Score = 32.0 bits (71), Expect = 0.38
Identities = 37/149 (24%), Positives = 52/149 (34%), Gaps = 11/149 (7%)
Query: 57 QSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPV----IPQQ 112
Q + P P+ P G P + Q PT ++P A PV Q
Sbjct: 1845 QGLPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQGKAAGQ 1904
Query: 113 PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQP------HQPMQPQ-PPVHPMQP 165
P P Q + P+ P A Q + Q Q +P+Q Q PP+ PM P
Sbjct: 1905 VTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTPMAP 1964
Query: 166 LPPQPPLPPMFPMQPLPPMLPDLTLEAWP 194
+ PP P L P + ++ P
Sbjct: 1965 MGMNPPPMTRGPSGHLEPGMGPTGMQQQP 1993
Score = 32.0 bits (71), Expect = 0.38
Identities = 31/113 (27%), Positives = 39/113 (34%), Gaps = 12/113 (10%)
Query: 85 QQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMT-------PIQHHQPNLPPPA 137
Q PPT +P P + Q Q M PIQH P + P A
Sbjct: 1904 QVTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTPMA 1963
Query: 138 QQPYQPQPVQPQPHQPMQPQPPVHPMQPLPP--QPPLPPMFPMQ---PLPPML 185
P P+ P ++P MQ PP Q LP +Q P P M+
Sbjct: 1964 PMGMNPPPMTRGPSGHLEPGMGPTGMQQQPPWSQGGLPQPQQLQSGMPRPAMM 2016
Score = 27.7 bits (60), Expect = 7.1
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 139 QPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPML 185
Q YQ + +Q Q P+QP P+ P Q + P P Q +P L
Sbjct: 2258 QAYQQRLLQQQMGSPVQPN-PMSPQQHMLPNQAQSPHLQGQQIPNSL 2303
Score = 27.3 bits (59), Expect = 9.3
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 94 QPHHHIPVVPAQQPVIPQQPMMP-VPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQ 152
QP P +P QP + Q P MP G HS +Q+ P + Q+ P Q QP Q
Sbjct: 2098 QPIPGQPGMPQGQPGL-QPPTMPGQQGVHSNPAMQNMNP-MQAGVQRAGLP---QQQPQQ 2152
Query: 153 PMQPQPPVHPMQPLPPQ 169
+QP PM + PQ
Sbjct: 2153 QLQP-----PMGGMSPQ 2164
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 58.9 bits (141), Expect = 3e-09
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 99 IPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQP 158
+P + +P P+ P+P S+ P+ P++PP P P P P P+ P P
Sbjct: 175 VPSTASPMNTVPPPPIPPIPAMPSLPPM----PSIPPIPVPP--PVPTLP----PVPPVP 224
Query: 159 PVHPMQPLPPQPPLPPMFPMQPL--PPMLP 186
P+ P+ +PP PLPPM M PL PP+ P
Sbjct: 225 PIPPVPSVPPMTPLPPMSGMPPLNPPPVAP 254
Score = 43.1 bits (100), Expect = 2e-04
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 147
PP ++ P P VP PV P P+ PVP MTP+ P P P PV
Sbjct: 200 PPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP------PMSGMPPLNPPPVA 253
Query: 148 PQPHQPMQPQPPVHPMQPLPPQ--PPLPPMFPMQ 179
P P P++ L P PL P+ P+Q
Sbjct: 254 PLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQ 287
Score = 37.4 bits (85), Expect = 0.009
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 140 PYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWPS 195
P P+ P P+ P P + + P+P PP+P P+ LPP+ P + PS
Sbjct: 176 PSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPS 231
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 58.9 bits (141), Expect = 3e-09
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 99 IPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQP 158
+P + +P P+ P+P S+ P+ P++PP P P P P P+ P P
Sbjct: 175 VPSTASPMNTVPPPPIPPIPAMPSLPPM----PSIPPIPVPP--PVPTLP----PVPPVP 224
Query: 159 PVHPMQPLPPQPPLPPMFPMQPL--PPMLP 186
P+ P+ +PP PLPPM M PL PP+ P
Sbjct: 225 PIPPVPSVPPMTPLPPMSGMPPLNPPPVAP 254
Score = 43.1 bits (100), Expect = 2e-04
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 147
PP ++ P P VP PV P P+ PVP MTP+ P P P PV
Sbjct: 200 PPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP------PMSGMPPLNPPPVA 253
Query: 148 PQPHQPMQPQPPVHPMQPLPPQ--PPLPPMFPMQ 179
P P P++ L P PL P+ P+Q
Sbjct: 254 PLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQ 287
Score = 37.4 bits (85), Expect = 0.009
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 140 PYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWPS 195
P P+ P P+ P P + + P+P PP+P P+ LPP+ P + PS
Sbjct: 176 PSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPS 231
>gi|195232763 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 4e-09
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 140
P+ QQ T + + I P + P Q +MP Q +TP Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLP---PQPPLPPMFPMQPLPPMLP 186
P QP+ P Q QPPV P Q P P PP+ P Q P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 46.2 bits (108), Expect = 2e-05
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 84 SQQHPPTHTLQPHHHIPVVPAQQPVIPQQP---MMPVPGQHSMTPIQHHQPNLPPPAQQP 140
SQ PP Q H + +Q PV P Q +MP Q + P Q H P L P QP
Sbjct: 739 SQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSH-PQLTPSQSQP 797
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 171
P P Q QP + P Q PP P
Sbjct: 798 ---------PVTPSQRQPQLMPSQSQPPVTP 819
>gi|195232761 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 4e-09
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 140
P+ QQ T + + I P + P Q +MP Q +TP Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLP---PQPPLPPMFPMQPLPPMLP 186
P QP+ P Q QPPV P Q P P PP+ P Q P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 46.2 bits (108), Expect = 2e-05
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 84 SQQHPPTHTLQPHHHIPVVPAQQPVIPQQP---MMPVPGQHSMTPIQHHQPNLPPPAQQP 140
SQ PP Q H + +Q PV P Q +MP Q + P Q H P L P QP
Sbjct: 739 SQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSH-PQLTPSQSQP 797
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 171
P P Q QP + P Q PP P
Sbjct: 798 ---------PVTPSQRQPQLMPSQSQPPVTP 819
>gi|195232759 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 4e-09
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 140
P+ QQ T + + I P + P Q +MP Q +TP Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLP---PQPPLPPMFPMQPLPPMLP 186
P QP+ P Q QPPV P Q P P PP+ P Q P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 46.2 bits (108), Expect = 2e-05
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 84 SQQHPPTHTLQPHHHIPVVPAQQPVIPQQP---MMPVPGQHSMTPIQHHQPNLPPPAQQP 140
SQ PP Q H + +Q PV P Q +MP Q + P Q H P L P QP
Sbjct: 739 SQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSH-PQLTPSQSQP 797
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 171
P P Q QP + P Q PP P
Sbjct: 798 ---------PVTPSQRQPQLMPSQSQPPVTP 819
>gi|73765552 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 4e-09
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 140
P+ QQ T + + I P + P Q +MP Q +TP Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLP---PQPPLPPMFPMQPLPPMLP 186
P QP+ P Q QPPV P Q P P PP+ P Q P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 46.2 bits (108), Expect = 2e-05
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 84 SQQHPPTHTLQPHHHIPVVPAQQPVIPQQP---MMPVPGQHSMTPIQHHQPNLPPPAQQP 140
SQ PP Q H + +Q PV P Q +MP Q + P Q H P L P QP
Sbjct: 739 SQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSH-PQLTPSQSQP 797
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 171
P P Q QP + P Q PP P
Sbjct: 798 ---------PVTPSQRQPQLMPSQSQPPVTP 819
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 58.5 bits (140), Expect = 4e-09
Identities = 35/104 (33%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 140
P+L ++ PPT P P QP P P P P S P+ P+ PPP P
Sbjct: 1451 PLLEEKPPPTP--------PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLP 1502
Query: 141 YQPQPVQPQPHQPMQP------QPPVHPMQPLPPQPPLPPMFPM 178
P P P P P P PP P P P P LP P+
Sbjct: 1503 PPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRPL 1546
Score = 51.2 bits (121), Expect = 6e-07
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 100 PVVPAQQPVIPQQPMMP-VPGQHSM-TP----IQHHQPNLPPPAQQPYQPQPVQPQPHQP 153
P+ PA +P P +P +P +S TP ++ P PPPA P P P P QP
Sbjct: 1423 PLAPAA--AVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQP 1480
Query: 154 MQPQPPV--------HPMQPLPPQPPLPPMFPMQPLPP 183
P PP P PLPP P PP P P PP
Sbjct: 1481 ALPSPPPLVAPTPSSPPPPPLPPPP--PPAMPSPPPPP 1516
Score = 49.3 bits (116), Expect = 2e-06
Identities = 35/98 (35%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 105 QQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQP---VQPQPHQPMQP--QPP 159
+ P++ ++P P P QP PPP QP P P V P P P P PP
Sbjct: 1449 EPPLLEEKP----PPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 1504
Query: 160 VHPMQPLPPQPP--------LPPMFPMQPLP--PMLPD 187
P P PP PP PP P P P P LPD
Sbjct: 1505 PPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPD 1542
Score = 38.9 bits (89), Expect = 0.003
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 29/125 (23%)
Query: 88 PPT-HTLQPHHHIPVVPAQQP----VIPQQPMMPVP----------------GQHSMTPI 126
PPT + QP H ++ A P V+P P +P G H + P
Sbjct: 768 PPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPA 827
Query: 127 QHH-QPNLPPPAQQPYQPQPVQPQPH------QPMQPQPPVHPMQPLPPQPPLPPMF-PM 178
P PPP P P P+Q + H +P P P + P + L P + + +
Sbjct: 828 TRDGAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGAL 887
Query: 179 QPLPP 183
+PLPP
Sbjct: 888 EPLPP 892
Score = 33.1 bits (74), Expect = 0.17
Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 100 PVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP 159
P PA P P P G TP PN PP +P+ P Q PP
Sbjct: 982 PGPPAYDPYGPYCPGR-ASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPP 1040
Query: 160 VHPMQPLPPQPPLPP 174
P P PP P P
Sbjct: 1041 PPPPPPPPPAPASEP 1055
Score = 32.7 bits (73), Expect = 0.22
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 14/91 (15%)
Query: 109 IPQQPMMPVPGQHSMTPIQHHQ------PNLP---PPAQQPYQPQPVQPQPH-QPMQPQP 158
+ + P P P S P H P+LP PP P + P P +
Sbjct: 760 LQKSPPPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKV 819
Query: 159 PVHPMQPLP----PQPPLPPMFPMQPLPPML 185
VH ++P PQPP PP P P+P L
Sbjct: 820 GVHLLEPATRDGAPQPPPPPPPPPPPMPLQL 850
Score = 30.0 bits (66), Expect = 1.4
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 83 LSQQHPP-----THTLQPHHHIPVVPAQQPVIPQQ-PMMPVPGQHSMTPIQHHQPNLPPP 136
LS Q PP L PH + + P+Q P +P + G + P L P
Sbjct: 168 LSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGP-----AGLGPA 222
Query: 137 AQQPYQPQPVQPQP---HQPMQ 155
PY+P P P P H P Q
Sbjct: 223 QTPPYRPGPPDPPPPPRHLPTQ 244
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 150 PHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 180
P P + PP P + L PQPP P P P
Sbjct: 1306 PLSPPKSVPPSVPARGLQPQPPATPAVPHPP 1336
Score = 29.3 bits (64), Expect = 2.4
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 116 PVPGQHS---MTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPL 172
PVP + S P+ + PPP P+P P+ + +PP + P+PP
Sbjct: 1671 PVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPE--KTTSEKPPEQTPETAMPEPPA 1728
Query: 173 P 173
P
Sbjct: 1729 P 1729
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 58.2 bits (139), Expect = 5e-09
Identities = 49/136 (36%), Positives = 55/136 (40%), Gaps = 22/136 (16%)
Query: 59 IRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQP------HHHIPVV-PAQQPVIPQ 111
+ PP P G P +H P HPP + P H P V PA V PQ
Sbjct: 336 VHPPAP--GVHPPAPGVH----PPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQ 389
Query: 112 QPMM--PVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPP- 168
P + P PG H P H Q PP P P V PQP P VHP P+PP
Sbjct: 390 APGVHPPAPGMHPQAPGVHPQ----PPGVHPSAP-GVHPQPPGVHPSNPGVHPPTPMPPM 444
Query: 169 -QPPLPPMFPMQPLPP 183
+PPLP P PP
Sbjct: 445 LRPPLPSEGPGNIPPP 460
Score = 51.2 bits (121), Expect = 6e-07
Identities = 63/202 (31%), Positives = 71/202 (35%), Gaps = 48/202 (23%)
Query: 17 MPLPPHP-------GHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIRPPYPSYGYE 69
+PLPP P G PG A V A V+ P + PP P G
Sbjct: 259 LPLPPMPPTGPAPSGPPGPPQLP-----PPAPGVHPPAPVVHPPA--SGVHPPAP--GVH 309
Query: 70 PMGGWLHHQIIPVLSQQHPPT---HTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPI 126
P +H P HPPT H P H P P P P PG H P
Sbjct: 310 PPAPGVH----PPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHP--PAPGVHPPAPG 363
Query: 127 QHHQPNL----PPPAQQPYQP--QPVQPQPHQP---MQPQPP-VHPMQP--------LPP 168
H P+ P P P P P H P M PQ P VHP P + P
Sbjct: 364 VHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP 423
Query: 169 QPP-----LPPMFPMQPLPPML 185
QPP P + P P+PPML
Sbjct: 424 QPPGVHPSNPGVHPPTPMPPML 445
Score = 43.9 bits (102), Expect = 1e-04
Identities = 37/114 (32%), Positives = 43/114 (37%), Gaps = 16/114 (14%)
Query: 59 IRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVP 118
+ PP PS G P +H P + Q P H P H Q P + QP P
Sbjct: 364 VHPP-PSAGVHPQAPGVH-PAAPAVHPQAPGVHPPAPGMH-----PQAPGVHPQP----P 412
Query: 119 GQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPM-QPQPPVHPMQPLPPQPP 171
G H P H Q PP P P P P PM +P P +PP PP
Sbjct: 413 GVHPSAPGVHPQ----PPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
Score = 37.7 bits (86), Expect = 0.007
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 131 PNLPPPAQQPYQP--QPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLP 186
P PP ++P P + P+P P PP PLPP PP P P PP LP
Sbjct: 224 PAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLP 281
Score = 35.8 bits (81), Expect = 0.026
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 107 PVIPQQPMMPVPGQHSMTPIQHHQPNLPP-PAQQPYQPQPVQPQPHQPMQPQPPVHPMQP 165
P P P P + P+ + P PP P P P P P PM P P P
Sbjct: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLP--PPPPGGLPLPPMPPTGPAPSGPP 275
Query: 166 LPPQ--PPLPPMFPMQPL--PP 183
PPQ PP P + P P+ PP
Sbjct: 276 GPPQLPPPAPGVHPPAPVVHPP 297
Score = 35.0 bits (79), Expect = 0.045
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 100 PVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP 159
P +PA P + + P + G P+ +LPPP P P+ P PP
Sbjct: 221 PSLPAGPPGVKRPPPPLMNGLPPRPPLPE---SLPPP-----------PPGGLPLPPMPP 266
Query: 160 VHPMQPLPPQPP-LPPMFP-MQPLPPML 185
P PP PP LPP P + P P++
Sbjct: 267 TGPAPSGPPGPPQLPPPAPGVHPPAPVV 294
Score = 33.9 bits (76), Expect = 0.099
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 138 QQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFP--------MQPLPPMLP 186
++P P + P +P PP+ M LPP+PPLP P + P+PP P
Sbjct: 215 EKPPAPPSLPAGPPGVKRPPPPL--MNGLPPRPPLPESLPPPPPGGLPLPPMPPTGP 269
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 57.8 bits (138), Expect = 6e-09
Identities = 51/169 (30%), Positives = 65/169 (38%), Gaps = 20/169 (11%)
Query: 16 AMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIRPPYPSYGYEPMGGWL 75
A LPP P P ++ + +Q + + + P + PP P M +L
Sbjct: 877 AAALPPKPARPPAVSPAL----TQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYL 932
Query: 76 HH--------QIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQ 127
++P + Q P L P H P+ Q + QQP P P Q P Q
Sbjct: 933 QQLQKVQPPTPLLPSVKVQSQPPPPLPPPPH----PSVQQQLQQQPPPPPPPQPQPPPQQ 988
Query: 128 HHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHP---MQPLPPQPPLP 173
HQP P QP Q QP P QPP HP QP PPQP P
Sbjct: 989 QHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPP-HPPPGQQPPPPQPAKP 1036
Score = 55.1 bits (131), Expect = 4e-08
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 31/157 (19%)
Query: 59 IRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVP 118
+ P P ++P+G H P+L H P L PH P + P + Q ++ P
Sbjct: 808 LEPQLPGSVFDPIG----HFTQPIL---HLPQPELPPHLPQPPEHSTPPHLNQHAVVSPP 860
Query: 119 GQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPL--PPQ------- 169
H+ P QP+ P P+P +P P Q P+ P P+ PPQ
Sbjct: 861 ALHNALP---QQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEE 917
Query: 170 PPLPPMFPM------------QPLPPMLPDLTLEAWP 194
PP PP+ M QP P+LP + +++ P
Sbjct: 918 PPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQP 954
Score = 53.1 bits (126), Expect = 2e-07
Identities = 34/103 (33%), Positives = 38/103 (36%), Gaps = 21/103 (20%)
Query: 87 HPPTHTLQPHHHIPVVPAQQPV-IPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQP 145
HP + HHH Q P +PQQP PPP QQP P P
Sbjct: 730 HPGREQKKHHHHHHQQMQQAPAPVPQQP--------------------PPPPQQPPPPPP 769
Query: 146 VQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDL 188
Q Q P P PP P Q P PP F +P + P L
Sbjct: 770 PQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQL 812
Score = 49.3 bits (116), Expect = 2e-06
Identities = 48/160 (30%), Positives = 59/160 (36%), Gaps = 16/160 (10%)
Query: 18 PLPPHP--GHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIRPPYPSYGYE-----P 70
PL P P P + E + + + L L L+ Q P PS + P
Sbjct: 898 PLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPP 957
Query: 71 MGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSM-----TP 125
+ H + L QQ PP QP P QQ P +P+ P Q S P
Sbjct: 958 LPPPPHPSVQQQLQQQPPPPPPPQPQPP----PQQQHQPPPRPVHLQPMQFSTHIQQPPP 1013
Query: 126 IQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQP 165
Q QP PPP QQP PQP +PQ P H P
Sbjct: 1014 PQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDP 1053
Score = 47.8 bits (112), Expect = 7e-06
Identities = 33/99 (33%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 105 QQPVIPQQPMM------------PVPGQHSMT---------PIQHHQPNLPPPAQQPYQP 143
Q P++PQ PM P P SM +Q P LP Q P
Sbjct: 896 QTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPP 955
Query: 144 QPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLP 182
P+ P PH +Q Q P P PPQP PP QP P
Sbjct: 956 PPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPP 994
Score = 43.9 bits (102), Expect = 1e-04
Identities = 37/104 (35%), Positives = 44/104 (42%), Gaps = 20/104 (19%)
Query: 110 PQQPMMPVPGQHSMTP-IQHHQPNLPPPAQQPYQPQPVQPQ-----------PHQPMQPQ 157
P +P Q S P Q QPN PP P+ V P P QP+Q
Sbjct: 191 PGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTP 250
Query: 158 PPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWPSTDKTKR 201
PPV P QP PP P P P+Q PP+ + A P KTK+
Sbjct: 251 PPV-PPQPQPPPAPAPQ--PVQSHPPI-----IAATPQPVKTKK 286
Score = 41.6 bits (96), Expect = 5e-04
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 14/69 (20%)
Query: 128 HHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPD 187
HHQ PA P QP P P QP P PP QP PP PP P +P
Sbjct: 742 HHQQMQQAPAPVPQQPPP---PPQQPPPPPPPQQQQQPPPPPPP-----------PSMPQ 787
Query: 188 LTLEAWPST 196
A S+
Sbjct: 788 QAAPAMKSS 796
Score = 41.2 bits (95), Expect = 6e-04
Identities = 50/198 (25%), Positives = 69/198 (34%), Gaps = 58/198 (29%)
Query: 50 LTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQP-----HHHIPVVPA 104
L P+++ I+ P P G +P P QQ PP +P HHH P
Sbjct: 999 LQPMQFSTHIQQPPPPQGQQPPH--------PPPGQQPPPPQPAKPQQVIQHHHSPRHHK 1050
Query: 105 QQPV-------IPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQP--------VQPQ 149
P P M+ P + H P QQ QP+ VQPQ
Sbjct: 1051 SDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSP-----PQQNVQPKKQELRAASVVQPQ 1105
Query: 150 P---------HQP----------MQPQPPVHPMQ-----PLPPQPPLPPMFPMQP-LPPM 184
P H P ++P+PP HP LP +P + P+ +P + P
Sbjct: 1106 PLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESIKAPVHLPQRPEMKPVDVGRPVIRPP 1165
Query: 185 LPDLTLEAWPSTDKTKRE 202
+ P DK K+E
Sbjct: 1166 EQNAPPPGAPDKDKQKQE 1183
Score = 40.4 bits (93), Expect = 0.001
Identities = 49/173 (28%), Positives = 57/173 (32%), Gaps = 57/173 (32%)
Query: 76 HHQII---PVLSQQHPPTHTLQPHHHIPVVPAQQ----PVIPQQPMMPVPGQHS------ 122
HHQ + P Q PP QP P QQ P P P P S
Sbjct: 742 HHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFI 801
Query: 123 ---------------MTPIQHH-QP--NLPPPAQQPYQPQPVQ--PQPH----------- 151
PI H QP +LP P P+ PQP + PH
Sbjct: 802 ATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPA 861
Query: 152 ----QPMQPQPPVHPMQPLPPQPPLPP-------MFPMQPLPPML--PDLTLE 191
P QP P + LPP+P PP P+ P PPM P + LE
Sbjct: 862 LHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLE 914
Score = 35.8 bits (81), Expect = 0.026
Identities = 32/106 (30%), Positives = 40/106 (37%), Gaps = 24/106 (22%)
Query: 85 QQHPPTHTLQPHHHIPVVP---AQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPP-PAQQP 140
Q +PP PH V P Q PV+ P P+ + P QP PP PA QP
Sbjct: 212 QPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPP----QPQPPPAPAPQP 267
Query: 141 YQPQP----VQPQPHQPMQ------------PQPPVHPMQPLPPQP 170
Q P PQP + + P+H LPP+P
Sbjct: 268 VQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEP 313
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 57.4 bits (137), Expect = 8e-09
Identities = 31/69 (44%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 113 PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPL 172
PM P PGQ P PPP QQ QP P QP P QP QPP HP QPP
Sbjct: 46 PMGPGPGQSGPKP----PIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPP 101
Query: 173 PPMFPMQPL 181
PP +P+
Sbjct: 102 PPQDSSKPV 110
Score = 45.8 bits (107), Expect = 3e-05
Identities = 45/137 (32%), Positives = 48/137 (35%), Gaps = 17/137 (12%)
Query: 60 RPPYPSYGYE----PMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMM 115
R P P G PMG P S PP PH P QQP PQQP
Sbjct: 32 RSPPPGMGLNQNRGPMGPG------PGQSGPKPPIPPPPPHQQQQQPPPQQPP-PQQPPP 84
Query: 116 PVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ-PQPHQPMQPQPPVHPMQP--LPPQPPL 172
P H P H Q PPP Q +P Q P P + PP P PP
Sbjct: 85 HQPPPH---PQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGA 141
Query: 173 PPMFPMQPLPPMLPDLT 189
PP P P P +T
Sbjct: 142 PPGSGPGPTPTPPPAVT 158
Score = 42.0 bits (97), Expect = 4e-04
Identities = 34/116 (29%), Positives = 37/116 (31%), Gaps = 14/116 (12%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQP--------- 131
P QQ PP P P P P QQ P P Q S P+ P
Sbjct: 65 PHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSA 124
Query: 132 ----NLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPP 183
+ PPA P P P P P V P P PP PP + PP
Sbjct: 125 PPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAP-PPTPPSSGVPTTPP 179
Score = 39.7 bits (91), Expect = 0.002
Identities = 36/111 (32%), Positives = 39/111 (35%), Gaps = 15/111 (13%)
Query: 86 QHPPTHTLQPH-----HHIPVVPAQ---QPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPA 137
Q PP H PH P P Q +PV+ Q P P PG S P P PP
Sbjct: 80 QQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPG-PAPGVGSAPPASSSAPPATPPT 138
Query: 138 Q--QPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQ---PPLPPMFPMQPLPP 183
P P P + PP P P PP P PP P PP
Sbjct: 139 SGAPPGSGPGPTPTPPPAVTSAPPGAP-PPTPPSSGVPTTPPQAGGPPPPP 188
Score = 38.5 bits (88), Expect = 0.004
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Query: 129 HQPNLPPPA------QQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLP 182
H PPP + P P P Q P P+ P PP Q PPQ P P P P
Sbjct: 29 HDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPP 88
Query: 183 P 183
P
Sbjct: 89 P 89
Score = 30.8 bits (68), Expect = 0.84
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 5/87 (5%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 147
PPT P P P + P PG TP P PP A P P
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAP----PGAPPPTPPSSGVPTTPPQAGGPPPPPAAV 191
Query: 148 PQPHQ-PMQPQPPVHPMQPLPPQPPLP 173
P P P Q P P P P P
Sbjct: 192 PGPGPGPKQGPGPGGPKGGKMPGGPKP 218
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 55.1 bits (131), Expect = 4e-08
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 123 MTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP-VHPMQPLPPQPPLPPMFPMQPL 181
+ P+Q QP PPP P P P QPQP Q QPQPP + P +PPQP P QP
Sbjct: 534 LDPLQQQQPPQPPPPPPP--PPPSQPQPLQ--QPQPPQLQPPHQVPPQPQTQPPPTQQPQ 589
Query: 182 PP 183
PP
Sbjct: 590 PP 591
Score = 44.3 bits (103), Expect = 7e-05
Identities = 32/67 (47%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 103 PAQQPVIPQQPMMPVPGQHSMT-PIQHHQP-NLPPPAQQPYQPQPVQPQPHQPMQPQPPV 160
P QQ PQ P P P S P+Q QP L PP Q P QPQ QP P Q QPQPP
Sbjct: 536 PLQQQQPPQPPPPPPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQ-TQPPPTQ--QPQPPT 592
Query: 161 H--PMQP 165
P+ P
Sbjct: 593 QAAPLHP 599
Score = 43.5 bits (101), Expect = 1e-04
Identities = 28/67 (41%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 107 PVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQ-QP-YQPQPVQPQPHQPMQPQPPVHPMQ 164
P+ QQP P P P PPP+Q QP QPQP Q QP + PQP P
Sbjct: 536 PLQQQQPPQPPP-----------PPPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQTQPPP 584
Query: 165 PLPPQPP 171
PQPP
Sbjct: 585 TQQPQPP 591
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
Query: 32 SYENSHSQAINVDRTALVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTH 91
SYE+S +IN ++ ++L PL+ Q +PP P P Q P L Q PP
Sbjct: 519 SYESS---SINGRKSGVMLDPLQQQQPPQPPPPPPPPPPS------QPQP-LQQPQPPQ- 567
Query: 92 TLQPHHHIPVVPAQQPVIPQQPMMP 116
LQP H +P P QP QQP P
Sbjct: 568 -LQPPHQVPPQPQTQPPPTQQPQPP 591
Score = 36.2 bits (82), Expect = 0.020
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 65 SYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMP-VPGQHSM 123
SY + G ++ L QQ PP QP P P QP QQP P + H +
Sbjct: 519 SYESSSINGRKSGVMLDPLQQQQPP----QPPPPPPPPPPSQPQPLQQPQPPQLQPPHQV 574
Query: 124 TPIQHHQPNLPPPAQQPYQP---QPVQP 148
P QP PP QQP P P+ P
Sbjct: 575 PPQPQTQP---PPTQQPQPPTQAAPLHP 599
Score = 36.2 bits (82), Expect = 0.020
Identities = 16/33 (48%), Positives = 17/33 (51%)
Query: 153 PMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPML 185
P+Q Q P P P PP PP P QP PP L
Sbjct: 536 PLQQQQPPQPPPPPPPPPPSQPQPLQQPQPPQL 568
Score = 33.5 bits (75), Expect = 0.13
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 149 QPHQPMQPQPPVHPMQPLPPQP---PLPPMF----PMQPLPPMLPDLTLEAWPST 196
Q QP QP PP P P PQP P PP + P P P T + P T
Sbjct: 538 QQQQPPQPPPPPPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQTQPPPTQQPQPPT 592
Score = 29.6 bits (65), Expect = 1.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 159 PVHPMQPLPPQPPLPPMFPMQPLPPMLP 186
P+ QP P PP PP P QP P P
Sbjct: 536 PLQQQQPPQPPPPPPPPPPSQPQPLQQP 563
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 54.7 bits (130), Expect = 5e-08
Identities = 53/190 (27%), Positives = 67/190 (35%), Gaps = 14/190 (7%)
Query: 18 PLPPHPGHPGYINFSYENSHSQAINVD---RTALVLTPLKWYQSIRPPYPSYGYEPMGGW 74
P P GH GY Y + Q + R + L + Q I P YG + G+
Sbjct: 408 PSGPQQGH-GYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQI----PPYGQQGPSGY 462
Query: 75 LHHQIIPVLSQQHP-PTHTLQPHHHIPV--VPAQQPVIPQQPMMPVPGQHSMTPIQHHQP 131
P +QQ P P P+ P P QP QQP P S P QP
Sbjct: 463 GQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQP 522
Query: 132 NLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLE 191
+ PP Q P Q Q Q QPP Q Q P P QP P L
Sbjct: 523 SQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQ---AQSPYQQQQPQQPAPSTLSQQAAY 579
Query: 192 AWPSTDKTKR 201
P + ++++
Sbjct: 580 PQPQSQQSQQ 589
Score = 40.0 bits (92), Expect = 0.001
Identities = 39/132 (29%), Positives = 47/132 (35%), Gaps = 29/132 (21%)
Query: 57 QSIRPPY------------PSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQP----HHHIP 100
Q +PPY PSY +P Q P Q P ++ QP H P
Sbjct: 479 QQQQPPYSQQPPSQTPHAQPSYQQQP-------QSQPPQLQSSQPPYSQQPSQPPHQQSP 531
Query: 101 V-VPAQQPVIPQQPMM--PVPGQHSMTPIQHHQPNLPPP---AQQPYQPQPVQPQPHQPM 154
P+QQ Q P P + +P Q QP P P +QQ PQP Q Q
Sbjct: 532 APYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTA 591
Query: 155 QPQPPVHPMQPL 166
Q P Q L
Sbjct: 592 YSQQRFPPPQEL 603
Score = 32.0 bits (71), Expect = 0.38
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 103 PAQQPVIPQQPMM-PVPGQHSMTP-IQHHQPNLPPPAQQPYQPQPVQPQP------HQPM 154
P P P PM P P + P +Q+H P + PA P +P + P H M
Sbjct: 1553 PPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLP-RPMENRTSPSKSPFLHSGM 1611
Query: 155 QPQ---PPVHPMQPLPPQPPLPPM 175
+ Q PPV P + P P PPM
Sbjct: 1612 KMQKAGPPV-PASHIAPAPVQPPM 1634
Score = 29.6 bits (65), Expect = 1.9
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 17/92 (18%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 140
PV PP QP P+ Q IPQ S P+ N P++ P
Sbjct: 1560 PVPPMTRPPPSNYQPP------PSMQNHIPQVS--------SPAPLPRPMENRTSPSKSP 1605
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPL 172
+ ++ Q P P P H + P P QPP+
Sbjct: 1606 FLHSGMKMQKAGP--PVPASH-IAPAPVQPPM 1634
Score = 28.5 bits (62), Expect = 4.2
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 11/70 (15%)
Query: 128 HHQPNLPPPAQQPYQPQPVQPQPHQP------MQPQP-----PVHPMQPLPPQPPLPPMF 176
HH P P + QP PQP P M+PQP P Q P P +
Sbjct: 358 HHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGY 417
Query: 177 PMQPLPPMLP 186
P QP P
Sbjct: 418 PGQPYGSQTP 427
Score = 28.1 bits (61), Expect = 5.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Query: 103 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQ-------PYQPQPVQPQPHQPMQ 155
P +P M P P I H N AQ P PQ PQP +
Sbjct: 713 PLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALS 772
Query: 156 PQPP 159
P+ P
Sbjct: 773 PRQP 776
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 54.7 bits (130), Expect = 5e-08
Identities = 53/190 (27%), Positives = 67/190 (35%), Gaps = 14/190 (7%)
Query: 18 PLPPHPGHPGYINFSYENSHSQAINVD---RTALVLTPLKWYQSIRPPYPSYGYEPMGGW 74
P P GH GY Y + Q + R + L + Q I P YG + G+
Sbjct: 408 PSGPQQGH-GYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQI----PPYGQQGPSGY 462
Query: 75 LHHQIIPVLSQQHP-PTHTLQPHHHIPV--VPAQQPVIPQQPMMPVPGQHSMTPIQHHQP 131
P +QQ P P P+ P P QP QQP P S P QP
Sbjct: 463 GQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQP 522
Query: 132 NLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLE 191
+ PP Q P Q Q Q QPP Q Q P P QP P L
Sbjct: 523 SQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQ---AQSPYQQQQPQQPAPSTLSQQAAY 579
Query: 192 AWPSTDKTKR 201
P + ++++
Sbjct: 580 PQPQSQQSQQ 589
Score = 40.0 bits (92), Expect = 0.001
Identities = 39/132 (29%), Positives = 47/132 (35%), Gaps = 29/132 (21%)
Query: 57 QSIRPPY------------PSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQP----HHHIP 100
Q +PPY PSY +P Q P Q P ++ QP H P
Sbjct: 479 QQQQPPYSQQPPSQTPHAQPSYQQQP-------QSQPPQLQSSQPPYSQQPSQPPHQQSP 531
Query: 101 V-VPAQQPVIPQQPMM--PVPGQHSMTPIQHHQPNLPPP---AQQPYQPQPVQPQPHQPM 154
P+QQ Q P P + +P Q QP P P +QQ PQP Q Q
Sbjct: 532 APYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTA 591
Query: 155 QPQPPVHPMQPL 166
Q P Q L
Sbjct: 592 YSQQRFPPPQEL 603
Score = 28.5 bits (62), Expect = 4.2
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 11/70 (15%)
Query: 128 HHQPNLPPPAQQPYQPQPVQPQPHQP------MQPQP-----PVHPMQPLPPQPPLPPMF 176
HH P P + QP PQP P M+PQP P Q P P +
Sbjct: 358 HHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGY 417
Query: 177 PMQPLPPMLP 186
P QP P
Sbjct: 418 PGQPYGSQTP 427
Score = 28.1 bits (61), Expect = 5.5
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Query: 103 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQ-------PYQPQPVQPQPHQPMQ 155
P +P M P P I H N AQ P PQ PQP +
Sbjct: 713 PLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALS 772
Query: 156 PQPP 159
P+ P
Sbjct: 773 PRQP 776
Score = 28.1 bits (61), Expect = 5.5
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 116 PVPGQHSMTPIQHHQPNLPPPAQQPYQPQPV---QPQPHQPMQPQ---PPVHPMQPLPPQ 169
P P Q + Q Q + P P +P + + P H M+ Q PPV P + P
Sbjct: 1353 PFPSQQTTMYQQQQQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV-PASHIAPA 1411
Query: 170 PPLPPM 175
P PPM
Sbjct: 1412 PVQPPM 1417
Score = 27.3 bits (59), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 103 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHP 162
P+QQ + QQ S P+ N P++ P+ ++ Q P P P H
Sbjct: 1355 PSQQTTMYQQQQQV----SSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGP--PVPASH- 1407
Query: 163 MQPLPPQPPL 172
+ P P QPP+
Sbjct: 1408 IAPAPVQPPM 1417
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 54.3 bits (129), Expect = 7e-08
Identities = 34/87 (39%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 101 VVPAQQPVIPQQPMMPVPGQHSMTPIQHHQP--NLPPPAQQPYQPQ-PVQPQPHQPMQPQ 157
V PA P P +P PG TP P P +Q P QPQ P P PH +Q
Sbjct: 193 VTPAPSSAPPGTPQLPTPGP---TPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA 249
Query: 158 PPVHPMQPLPPQPPLPPMFPMQPLPPM 184
P +HP +P P PP P P PL P+
Sbjct: 250 PALHPQRPPSPHPP-PHPSPHPPLQPL 275
Score = 48.5 bits (114), Expect = 4e-06
Identities = 55/203 (27%), Positives = 73/203 (35%), Gaps = 28/203 (13%)
Query: 16 AMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQ--SIRPPYPSYGYEPMGG 73
A PL HPG P + S QA L +P Y S++ P +
Sbjct: 305 AGPLLQHPGPPQPFGLPPQASQGQA------PLGTSPAAAYPHTSLQLPASQSALQSQQP 358
Query: 74 WLHHQIIPV-LSQQH---PPTHTL------QPHHHIPVVPAQQPVIPQQPMMPVPGQHSM 123
+ P L+ H PPT + Q H H P + P + P P +
Sbjct: 359 PREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPL 418
Query: 124 TPIQ-HHQPNL-PPPAQQPYQPQPVQPQPHQP--------MQPQPPVHPMQPLPPQPPLP 173
+ + HH P+ PPP Q Q QP+ P QP + P P HP L P P
Sbjct: 419 SSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 478
Query: 174 PMFPMQPLPPMLPDLTLEAWPST 196
P +P P +T PST
Sbjct: 479 PFAQHPFVPGGPPPITPPTCPST 501
Score = 47.4 bits (111), Expect = 9e-06
Identities = 40/110 (36%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 89 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQH-SMTPIQHHQ-PNLPPPAQQPYQPQPV 146
P+ T P P +Q P PQ P PVP H P H Q P P P P P+
Sbjct: 214 PSATAVPPQGSPTA-SQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPL 272
Query: 147 QP------QPHQPMQPQPPVHPMQPLPPQ-----PPLPPMFPMQP--LPP 183
QP QP P QPP+H P P P L P QP LPP
Sbjct: 273 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPP 322
Score = 42.0 bits (97), Expect = 4e-04
Identities = 44/143 (30%), Positives = 50/143 (34%), Gaps = 39/143 (27%)
Query: 76 HHQIIPVLSQQHPPTHTLQPHH--HIPVVP----AQQPVIPQQPMMPVPGQHSMTPIQHH 129
H Q P L Q PP+ PH H P+ P A QP P P+ GQ P H
Sbjct: 245 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGP---H 301
Query: 130 QPNLPPPAQQPYQPQP--VQPQ----------------PHQPMQ----------PQPPVH 161
P Q P PQP + PQ PH +Q QPP
Sbjct: 302 SLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPRE 361
Query: 162 PMQPLPPQPPLPPMFPMQPLPPM 184
QPLPP P P P P+
Sbjct: 362 --QPLPPAPLAMPHIKPPPTTPI 382
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 87 HPPTHTLQPHHH-IPVVPAQQPVIPQ-QPMMPVPGQHSMTPIQHHQPNLPPPAQQPY--- 141
HPP L P +P PAQ P + Q Q + P P H T + P PP AQ P+
Sbjct: 430 HPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ-PPFAQHPFVPG 488
Query: 142 QPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 171
P P+ P P P PP P QPP
Sbjct: 489 GPPPITP-PTCPSTSTPPAGP--GTSAQPP 515
Score = 41.2 bits (95), Expect = 6e-04
Identities = 45/125 (36%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 61 PPYPSYGYEPMGGWLHHQIIPVLSQ--QHPPTHTLQ-PHHHIPVVPAQQPVIPQQPMMPV 117
P P+ G P + Q P SQ P T PH HI PA P Q+P P
Sbjct: 205 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHP---QRPPSPH 261
Query: 118 PGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQ-------PLPPQP 170
P H +P QP L A QP P QP H P P H +Q P PPQP
Sbjct: 262 PPPHP-SPHPPLQP-LTGSAGQPSAPSHAQPPLHGQGPPGP--HSLQAGPLLQHPGPPQP 317
Query: 171 -PLPP 174
LPP
Sbjct: 318 FGLPP 322
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 54.3 bits (129), Expect = 7e-08
Identities = 34/87 (39%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 101 VVPAQQPVIPQQPMMPVPGQHSMTPIQHHQP--NLPPPAQQPYQPQ-PVQPQPHQPMQPQ 157
V PA P P +P PG TP P P +Q P QPQ P P PH +Q
Sbjct: 747 VTPAPSSAPPGTPQLPTPGP---TPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA 803
Query: 158 PPVHPMQPLPPQPPLPPMFPMQPLPPM 184
P +HP +P P PP P P PL P+
Sbjct: 804 PALHPQRPPSPHPP-PHPSPHPPLQPL 829
Score = 48.5 bits (114), Expect = 4e-06
Identities = 55/203 (27%), Positives = 73/203 (35%), Gaps = 28/203 (13%)
Query: 16 AMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQ--SIRPPYPSYGYEPMGG 73
A PL HPG P + S QA L +P Y S++ P +
Sbjct: 859 AGPLLQHPGPPQPFGLPPQASQGQA------PLGTSPAAAYPHTSLQLPASQSALQSQQP 912
Query: 74 WLHHQIIPV-LSQQH---PPTHTL------QPHHHIPVVPAQQPVIPQQPMMPVPGQHSM 123
+ P L+ H PPT + Q H H P + P + P P +
Sbjct: 913 PREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPL 972
Query: 124 TPIQ-HHQPNL-PPPAQQPYQPQPVQPQPHQP--------MQPQPPVHPMQPLPPQPPLP 173
+ + HH P+ PPP Q Q QP+ P QP + P P HP L P P
Sbjct: 973 SSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 1032
Query: 174 PMFPMQPLPPMLPDLTLEAWPST 196
P +P P +T PST
Sbjct: 1033 PFAQHPFVPGGPPPITPPTCPST 1055
Score = 47.4 bits (111), Expect = 9e-06
Identities = 40/110 (36%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 89 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQH-SMTPIQHHQ-PNLPPPAQQPYQPQPV 146
P+ T P P +Q P PQ P PVP H P H Q P P P P P+
Sbjct: 768 PSATAVPPQGSPTA-SQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPL 826
Query: 147 QP------QPHQPMQPQPPVHPMQPLPPQ-----PPLPPMFPMQP--LPP 183
QP QP P QPP+H P P P L P QP LPP
Sbjct: 827 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPP 876
Score = 42.0 bits (97), Expect = 4e-04
Identities = 44/143 (30%), Positives = 50/143 (34%), Gaps = 39/143 (27%)
Query: 76 HHQIIPVLSQQHPPTHTLQPHH--HIPVVP----AQQPVIPQQPMMPVPGQHSMTPIQHH 129
H Q P L Q PP+ PH H P+ P A QP P P+ GQ P H
Sbjct: 799 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGP---H 855
Query: 130 QPNLPPPAQQPYQPQP--VQPQ----------------PHQPMQ----------PQPPVH 161
P Q P PQP + PQ PH +Q QPP
Sbjct: 856 SLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPRE 915
Query: 162 PMQPLPPQPPLPPMFPMQPLPPM 184
QPLPP P P P P+
Sbjct: 916 --QPLPPAPLAMPHIKPPPTTPI 936
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 87 HPPTHTLQPHHH-IPVVPAQQPVIPQ-QPMMPVPGQHSMTPIQHHQPNLPPPAQQPY--- 141
HPP L P +P PAQ P + Q Q + P P H T + P PP AQ P+
Sbjct: 984 HPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ-PPFAQHPFVPG 1042
Query: 142 QPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 171
P P+ P P P PP P QPP
Sbjct: 1043 GPPPITP-PTCPSTSTPPAGP--GTSAQPP 1069
Score = 41.2 bits (95), Expect = 6e-04
Identities = 45/125 (36%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 61 PPYPSYGYEPMGGWLHHQIIPVLSQ--QHPPTHTLQ-PHHHIPVVPAQQPVIPQQPMMPV 117
P P+ G P + Q P SQ P T PH HI PA P Q+P P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHP---QRPPSPH 815
Query: 118 PGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQ-------PLPPQP 170
P H +P QP L A QP P QP H P P H +Q P PPQP
Sbjct: 816 PPPHP-SPHPPLQP-LTGSAGQPSAPSHAQPPLHGQGPPGP--HSLQAGPLLQHPGPPQP 871
Query: 171 -PLPP 174
LPP
Sbjct: 872 FGLPP 876
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 54.3 bits (129), Expect = 7e-08
Identities = 34/87 (39%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 101 VVPAQQPVIPQQPMMPVPGQHSMTPIQHHQP--NLPPPAQQPYQPQ-PVQPQPHQPMQPQ 157
V PA P P +P PG TP P P +Q P QPQ P P PH +Q
Sbjct: 747 VTPAPSSAPPGTPQLPTPGP---TPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA 803
Query: 158 PPVHPMQPLPPQPPLPPMFPMQPLPPM 184
P +HP +P P PP P P PL P+
Sbjct: 804 PALHPQRPPSPHPP-PHPSPHPPLQPL 829
Score = 48.5 bits (114), Expect = 4e-06
Identities = 55/203 (27%), Positives = 73/203 (35%), Gaps = 28/203 (13%)
Query: 16 AMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQ--SIRPPYPSYGYEPMGG 73
A PL HPG P + S QA L +P Y S++ P +
Sbjct: 859 AGPLLQHPGPPQPFGLPPQASQGQA------PLGTSPAAAYPHTSLQLPASQSALQSQQP 912
Query: 74 WLHHQIIPV-LSQQH---PPTHTL------QPHHHIPVVPAQQPVIPQQPMMPVPGQHSM 123
+ P L+ H PPT + Q H H P + P + P P +
Sbjct: 913 PREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPL 972
Query: 124 TPIQ-HHQPNL-PPPAQQPYQPQPVQPQPHQP--------MQPQPPVHPMQPLPPQPPLP 173
+ + HH P+ PPP Q Q QP+ P QP + P P HP L P P
Sbjct: 973 SSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 1032
Query: 174 PMFPMQPLPPMLPDLTLEAWPST 196
P +P P +T PST
Sbjct: 1033 PFAQHPFVPGGPPPITPPTCPST 1055
Score = 47.4 bits (111), Expect = 9e-06
Identities = 40/110 (36%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 89 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQH-SMTPIQHHQ-PNLPPPAQQPYQPQPV 146
P+ T P P +Q P PQ P PVP H P H Q P P P P P+
Sbjct: 768 PSATAVPPQGSPTA-SQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPL 826
Query: 147 QP------QPHQPMQPQPPVHPMQPLPPQ-----PPLPPMFPMQP--LPP 183
QP QP P QPP+H P P P L P QP LPP
Sbjct: 827 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPP 876
Score = 42.0 bits (97), Expect = 4e-04
Identities = 44/143 (30%), Positives = 50/143 (34%), Gaps = 39/143 (27%)
Query: 76 HHQIIPVLSQQHPPTHTLQPHH--HIPVVP----AQQPVIPQQPMMPVPGQHSMTPIQHH 129
H Q P L Q PP+ PH H P+ P A QP P P+ GQ P H
Sbjct: 799 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGP---H 855
Query: 130 QPNLPPPAQQPYQPQP--VQPQ----------------PHQPMQ----------PQPPVH 161
P Q P PQP + PQ PH +Q QPP
Sbjct: 856 SLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPRE 915
Query: 162 PMQPLPPQPPLPPMFPMQPLPPM 184
QPLPP P P P P+
Sbjct: 916 --QPLPPAPLAMPHIKPPPTTPI 936
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 87 HPPTHTLQPHHH-IPVVPAQQPVIPQ-QPMMPVPGQHSMTPIQHHQPNLPPPAQQPY--- 141
HPP L P +P PAQ P + Q Q + P P H T + P PP AQ P+
Sbjct: 984 HPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ-PPFAQHPFVPG 1042
Query: 142 QPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 171
P P+ P P P PP P QPP
Sbjct: 1043 GPPPITP-PTCPSTSTPPAGP--GTSAQPP 1069
Score = 41.2 bits (95), Expect = 6e-04
Identities = 45/125 (36%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 61 PPYPSYGYEPMGGWLHHQIIPVLSQ--QHPPTHTLQ-PHHHIPVVPAQQPVIPQQPMMPV 117
P P+ G P + Q P SQ P T PH HI PA P Q+P P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHP---QRPPSPH 815
Query: 118 PGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQ-------PLPPQP 170
P H +P QP L A QP P QP H P P H +Q P PPQP
Sbjct: 816 PPPHP-SPHPPLQP-LTGSAGQPSAPSHAQPPLHGQGPPGP--HSLQAGPLLQHPGPPQP 871
Query: 171 -PLPP 174
LPP
Sbjct: 872 FGLPP 876
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 54.3 bits (129), Expect = 7e-08
Identities = 43/137 (31%), Positives = 54/137 (39%), Gaps = 12/137 (8%)
Query: 52 PLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQ 111
P Y + PP P+ + L ++P P + P PV+P P
Sbjct: 519 PFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPP----PVMPPSLPTSVP 574
Query: 112 QPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPL---PP 168
P MP P S P P LPPP+ P PV P P PPV P+ PL P
Sbjct: 575 PPGMP-PSLSSAGP----PPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATP 629
Query: 169 QPPLPPMFPMQPLPPML 185
P +PP Q +PP L
Sbjct: 630 PPGIPPPGVPQGIPPQL 646
Score = 51.6 bits (122), Expect = 5e-07
Identities = 43/134 (32%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 58 SIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPV 117
S+ PP+ Y P P L PP L P PV+P P P MP
Sbjct: 515 SMPPPFVPYSQMP----------PPLPTMPPPV--LPPSLPPPVMPPALPATVPPPGMPP 562
Query: 118 PGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPL-----PPQPPL 172
P P P +PP P PV P P PPV P L PP PL
Sbjct: 563 PVMPPSLPTSVPPPGMPPSLSSA-GPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPL 621
Query: 173 PPMFPMQPLPPMLP 186
PP+ P PP +P
Sbjct: 622 PPLSSATP-PPGIP 634
Score = 44.7 bits (104), Expect = 6e-05
Identities = 39/124 (31%), Positives = 46/124 (37%), Gaps = 34/124 (27%)
Query: 93 LQPHHHIPVVPAQQPVI-----------PQQPMMPVPG--------QHSMTPIQHHQPNL 133
LQPHH +P P P + P PM P PG Q + HHQ +
Sbjct: 76 LQPHH-LPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDG 134
Query: 134 PP-----PAQQPYQPQPVQPQPHQPMQ------PQPPVHPMQPLPPQPPLPPMFPMQPLP 182
PP + P + PV P + P PQPP P QP LP P QP P
Sbjct: 135 PPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLP---PAQPSP 191
Query: 183 PMLP 186
P
Sbjct: 192 SQSP 195
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 100 PVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP 159
P VP Q + P P MP P + P P+LPPP P P V P P P P
Sbjct: 519 PFVPYSQ-MPPPLPTMPPP----VLP-----PSLPPPVMPPALPATVPP----PGMPPPV 564
Query: 160 VHPMQPLPPQPP-LPPMFPMQPLPPMLPDLTLEA 192
+ P P PP +PP PP+LP +L +
Sbjct: 565 MPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSS 598
Score = 39.7 bits (91), Expect = 0.002
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 131 PNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTL 190
P +PPP P P PV P P P PP +PP P +PP P PP +P
Sbjct: 531 PTMPPPVLPPSLPPPVMP-PALPATVPPP-----GMPP-PVMPPSLPTSVPPPGMPPSLS 583
Query: 191 EAWP 194
A P
Sbjct: 584 SAGP 587
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 117 VPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP--------VHPMQPLPP 168
+P Q S +P + PP P P+ P ++P P P P+PP
Sbjct: 1489 LPPQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPP 1548
Query: 169 QPPLPPMFPMQP-LPPMLPDLTLEAW 193
PP PP+ P P + P + E W
Sbjct: 1549 PPPPPPLPPPPPVIKPQTSAVEQERW 1574
Score = 36.2 bits (82), Expect = 0.020
Identities = 42/173 (24%), Positives = 56/173 (32%), Gaps = 48/173 (27%)
Query: 57 QSIRPPYPSYGYEPMGG--WLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIP---- 110
QS P PSY +L H + S Q P+ Q H ++ P P
Sbjct: 198 QSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNK 257
Query: 111 ------------------QQPMMPVPGQHSMTPIQHHQ---------------PNLPPPA 137
QQ P P +MTP + Q +LP
Sbjct: 258 TTVQQEPLESGAKNKSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHK 317
Query: 138 QQPY----QPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLP 186
+ P P+PV+ + P Q P P PP PP P + +PP LP
Sbjct: 318 KGPVVAKDTPEPVKEEVTVPATSQVPESPSSEEPPLPP-----PNEEVPPPLP 365
Score = 35.8 bits (81), Expect = 0.026
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 18/97 (18%)
Query: 61 PPYPSYGYEPMGGW----LHHQ------IIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIP 110
PP P+ Y+ + LHHQ ++P+ + P + + P ++P P+Q + P
Sbjct: 110 PPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMP--PSQSYMPP 167
Query: 111 QQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 147
QP S P QP LPP P Q P Q
Sbjct: 168 PQP------PPSYYPPTSSQPYLPPAQPSPSQSPPSQ 198
Score = 33.5 bits (75), Expect = 0.13
Identities = 32/98 (32%), Positives = 39/98 (39%), Gaps = 20/98 (20%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 140
P LS PP L P P+ P P+MP+P S TP P +PPP
Sbjct: 594 PSLSSAGPPP-VLPP-------PSLSSTAPP-PVMPLPPLSSATP----PPGIPPPG--- 637
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLP-PQPPLPPMFP 177
PQ + PQ P PP Q P+ P P + P
Sbjct: 638 -VPQGIPPQ--LTAAPVPPASSSQSSQVPEKPRPALLP 672
Score = 32.7 bits (73), Expect = 0.22
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 141 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLP 186
Y P P P PP P P P LPP P +PP LP
Sbjct: 510 YMGNMSMPPPFVPYSQMPPPLPTM---PPPVLPPSLPPPVMPPALP 552
Score = 31.2 bits (69), Expect = 0.64
Identities = 34/105 (32%), Positives = 43/105 (40%), Gaps = 23/105 (21%)
Query: 96 HHHIPVVPAQQPV-IPQQPMMPVPGQHSMTPIQHHQPNLPPPA-------QQPYQPQPVQ 147
H+ P VP PV +P+ P PG S T P P + Q Q Q +Q
Sbjct: 13 HYPPPPVPPPPPVALPEAS--PGPGYSSSTT-----PAAPSSSGFMSFREQHLAQLQQLQ 65
Query: 148 PQPHQPMQPQPPVHPMQPLPPQPPLPPMFP------MQPLPPMLP 186
+ MQ H + P PP PP PP+ P QP PP +P
Sbjct: 66 QMHQKQMQCVLQPHHLPP-PPLPP-PPVMPGGGYGDWQPPPPPMP 108
Score = 31.2 bits (69), Expect = 0.64
Identities = 36/156 (23%), Positives = 49/156 (31%), Gaps = 19/156 (12%)
Query: 18 PLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIR-PPYPSYGYEPMGGWLH 76
P+PP PG + H + L P++ PP P Y P
Sbjct: 106 PMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQ--- 162
Query: 77 HQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQP-----MMPVPGQHSMTP-----I 126
+ PP P P +P QP Q P + P P S + +
Sbjct: 163 ----SYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYL 218
Query: 127 QHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHP 162
H Q LP P +P + Q + P PP P
Sbjct: 219 SHSQSYLPSSQASPSRPSQGHSK-SQLLAPPPPSAP 253
Score = 30.8 bits (68), Expect = 0.84
Identities = 24/83 (28%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVP----GQHSMTPIQHHQPNLPPPAQQPYQP 143
PP + P IP Q + PQ PVP Q S P + LP P P
Sbjct: 622 PPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAP 681
Query: 144 QPVQPQPHQPMQPQPPVHPMQPL 166
P Q P V+ PL
Sbjct: 682 PTTYHPPLQSAGPSEQVNSKAPL 704
Score = 30.8 bits (68), Expect = 0.84
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 150 PHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPP 183
P P+ P PPVH +PP P+P P PP
Sbjct: 1603 PSAPVLPPPPVH--SSIPPPGPVPMGMPPMSKPP 1634
Score = 29.3 bits (64), Expect = 2.4
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 74 WLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPV-IPQQPMMPVPGQHSMTPIQHHQPN 132
W ++ + QQ H L H PVV P + ++ +P Q +P +P
Sbjct: 297 WYRQHLLSL--QQRTKVH-LPGHKKGPVVAKDTPEPVKEEVTVPATSQVPESP-SSEEPP 352
Query: 133 LPPPAQQPYQP-QPVQPQPHQP 153
LPPP ++ P P +PQ P
Sbjct: 353 LPPPNEEVPPPLPPEEPQSEDP 374
Score = 29.3 bits (64), Expect = 2.4
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 109 IPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPP 168
+P PV + + P++ + +P +Q P P +P P + PP PLPP
Sbjct: 313 LPGHKKGPVVAKDTPEPVKE-EVTVPATSQVPESPSSEEPPLPPPNEEVPP-----PLPP 366
Query: 169 QPP 171
+ P
Sbjct: 367 EEP 369
Score = 27.7 bits (60), Expect = 7.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 152 QPMQPQPPVHPMQPLPPQPPLPPMFPMQPL 181
+P+ Q + +P PPLPP+ P+ PL
Sbjct: 1314 RPLDEQESQFRERDIPSLPPLPPLPPLPPL 1343
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 53.1 bits (126), Expect = 2e-07
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQ-----PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQ 142
PP H H P P PV P P +P P P + PN PPP +
Sbjct: 467 PPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPP 526
Query: 143 PQPVQPQPHQPMQPQPPVHPMQPLPP--QPPLPPMFPMQPLPPM 184
V P P + P +P +PP QPP+PP P +PP+
Sbjct: 527 THAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPGMPPV 570
Score = 48.1 bits (113), Expect = 5e-06
Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 21/111 (18%)
Query: 88 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 147
PP + P H+P P P P P +P P P P +PPP Y P P
Sbjct: 462 PPAYG--PPAHLPYHPHVYPPNPPPPPVPPP------PASFPPPAIPPPTPG-YPPPPPT 512
Query: 148 PQPHQPMQPQ--PPVHPMQPLPPQ----------PPLPPMFPMQPLPPMLP 186
P+ P P PP H + P PP PP P P+PP +P
Sbjct: 513 YNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIP 563
Score = 45.8 bits (107), Expect = 3e-05
Identities = 35/123 (28%), Positives = 42/123 (34%), Gaps = 22/123 (17%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQH------------------- 121
PV + P P H PV Q P +P +P P P +
Sbjct: 390 PVDATDLPKVQIPPPAHPAPV--HQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSL 447
Query: 122 -SMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 180
SM + PPA P P P + P P PPV P P P +PP P P
Sbjct: 448 QSMMKTEGPSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYP 507
Query: 181 LPP 183
PP
Sbjct: 508 PPP 510
Score = 43.1 bits (100), Expect = 2e-04
Identities = 48/151 (31%), Positives = 56/151 (37%), Gaps = 48/151 (31%)
Query: 77 HQIIPVLSQ--QHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP 134
HQI+ + SQ Q P HT H + P+ QP PQ P +Q QP+
Sbjct: 252 HQILDLYSQGKQQMPHHT---PHQLQQPPSLQPT-PQVPQ-----------VQQSQPSQS 296
Query: 135 PPAQQPYQPQPVQP----QP-HQPMQPQP-PVHPMQ-----------------PLPPQ-- 169
QP Q P QP QP QP +P P P P Q P PP+
Sbjct: 297 SEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIP 356
Query: 170 ------PPLPPMFPMQPLPPMLPDLTLEAWP 194
PPLPP P P L EA P
Sbjct: 357 KIETTHPPLPPAHPPPDRKPPLAAALGEAEP 387
Score = 37.0 bits (84), Expect = 0.012
Identities = 37/140 (26%), Positives = 48/140 (34%), Gaps = 45/140 (32%)
Query: 80 IPVLSQQHPP--THTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHS--------------- 122
+P + Q P + QP P PAQQ QQP P P S
Sbjct: 285 VPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEE 344
Query: 123 ----------MTPIQHHQPNLPPPAQQPYQPQPV-----QPQPHQPMQ---------PQP 158
+ I+ P LPP P + P+ + +P P+ P P
Sbjct: 345 NKAAEPPPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPP 404
Query: 159 ----PVHPMQPLPPQPPLPP 174
PVH PLP +PP PP
Sbjct: 405 AHPAPVHQPPPLPHRPPPPP 424
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 52.8 bits (125), Expect = 2e-07
Identities = 36/89 (40%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 113 PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQP--PVHPMQPLPPQP 170
P PG S+ + Q P QQP QPQP Q QP QP QPQP P P QP Q
Sbjct: 348 PAFSSPGGLSLGNVTAWQQ--PQQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQS 405
Query: 171 PLPP-----MFPMQPLPPMLPDLTLEAWP 194
L P + P PLP + LT+ P
Sbjct: 406 HLVPVSLSNLIPGSPLPHVGAALTVTTHP 434
Score = 42.0 bits (97), Expect = 4e-04
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 85 QQHPPTHTLQPHHHIPVVPAQ-QPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPY-- 141
QQ QP P P Q QP PQQP P Q + P+ NL P + P+
Sbjct: 368 QQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQSHLVPVS--LSNLIPGSPLPHVG 425
Query: 142 QPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFP 177
V PH ++ + PV P + P PP P +FP
Sbjct: 426 AALTVTTHPHISIKSE-PVSPSRERSPAPPPPAVFP 460
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 52.4 bits (124), Expect = 3e-07
Identities = 36/113 (31%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 81 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 140
P+ S P + P V A + P P+ P PG + P PPP P
Sbjct: 650 PITSADCPKPMVVTPG--AAAVAAPSVLAPTLPLPPPPGFPPLPP--------PPPPPPP 699
Query: 141 YQPQPVQPQPHQPMQPQPPVHPM-----QPLPPQPPLPPMFPMQPLPPMLPDL 188
P+ P P P PP HP PLP P +PP + PLPP P L
Sbjct: 700 QPGFPMPPPLPPPPPPPPPAHPAVTVPPPPLPAPPGVPPPPILPPLPPFPPGL 752
Score = 52.0 bits (123), Expect = 4e-07
Identities = 34/91 (37%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 89 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQP 148
PT L P P +P P P QP P+P P+ P PPP P P P
Sbjct: 677 PTLPLPPPPGFPPLPPPPPPPPPQPGFPMP-----PPLPPPPP--PPPPAHPAVTVPPPP 729
Query: 149 QPHQPMQPQPPVHPMQPLPPQPPLPP-MFPM 178
P P P PP+ LPP PP PP +FP+
Sbjct: 730 LPAPPGVPPPPI-----LPPLPPFPPGLFPV 755
Score = 43.1 bits (100), Expect = 2e-04
Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 100 PVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP--PPAQQPYQPQPVQPQPHQPMQPQ 157
P+ A P +PM+ PG ++ P LP PP P P P P P QP P
Sbjct: 650 PITSADCP----KPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFPM 705
Query: 158 PPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP 194
PP P PP PP P PP P +T+ P
Sbjct: 706 PP--------PLPPPPP-----PPPPAHPAVTVPPPP 729
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 103 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQ--PHQPMQPQPPV 160
PA P++P + G ++P PPA++ P+ P+ P ++ +P
Sbjct: 1219 PADSREPPEEPGLSQEGAMLLSP--------EPPAKEVEARPPLSPERAPEHDLEVEPEP 1270
Query: 161 HPMQPLPPQPPL---PPMFPMQPLPPMLPDLTLEAWPS 195
M PLP QPPL P P P PP P+ T + PS
Sbjct: 1271 PMMLPLPLQPPLPPPRP--PRPPSPPPEPETTDASHPS 1306
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 110 PQQPMMPVPGQHSMTPIQHHQPNLP----PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQP 165
P+ P V + ++P + + +L PP P QP P P P P PP P
Sbjct: 1241 PEPPAKEVEARPPLSPERAPEHDLEVEPEPPMMLPLPLQPPLPPPRPPRPPSPPPEPETT 1300
Query: 166 LPPQPPLPPMFPMQPLPPMLPDL 188
P +PP + PP P L
Sbjct: 1301 DASHPSVPPEPLAEDHPPHTPGL 1323
Score = 37.4 bits (85), Expect = 0.009
Identities = 36/122 (29%), Positives = 45/122 (36%), Gaps = 28/122 (22%)
Query: 100 PVVPAQQPVIPQQPMMPVPGQHSMTP---IQHHQPNLPPPAQQ---------PYQPQ-PV 146
P++PA P PM PG+ +P + P + PPA P QPQ PV
Sbjct: 1459 PLLPAPLASCPP-PMKRKPGRPRRSPPSMLSLDGPLVRPPAGAALGRELLLLPGQPQTPV 1517
Query: 147 QPQPHQPMQ------------PQPPVHPMQPLPPQPPL--PPMFPMQPLPPMLPDLTLEA 192
P H P P PP+ P P PP PP P P + L P +
Sbjct: 1518 FPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPTKLPFKELDNQWPSEAIPP 1577
Query: 193 WP 194
P
Sbjct: 1578 GP 1579
Score = 32.7 bits (73), Expect = 0.22
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 110 PQQPMMPVPG-QHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQ--PQPPVHPMQPL 166
P P PG + + +P Q + PPP ++P + + P PP PL
Sbjct: 383 PPAQATPAPGFKSAFSPYQTPVAHFPPPPEEPTATAAFGARDSGEFRRAPAPP-----PL 437
Query: 167 PPQPPLPPMFPMQPLPPMLPD 187
PP PL P P P PD
Sbjct: 438 PPAEPLAKEKPGTPPGPPPPD 458
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 52.4 bits (124), Expect = 3e-07
Identities = 41/109 (37%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Query: 85 QQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQ-P 143
QQ PP T Q P P+Q QQP+ P P Q P QP P P Q Q P
Sbjct: 194 QQQPPPSTNQHPQPAPQAPSQSQ---QQPLQPTPPQQP--PPASQQP--PAPTSQLQQAP 246
Query: 144 QPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLP-PMLPDLTLE 191
QP Q QPH Q Q P Q P P P LP P+ P L+
Sbjct: 247 QPQQHQPHSHSQNQNQPSPTQQSSSPPQKPSQSPGHGLPSPLTPPNPLQ 295
Score = 38.1 bits (87), Expect = 0.005
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 127 QHHQPNLPPPAQQPYQPQPVQP--QPHQPMQPQPPVHPMQPLPPQPPLP 173
Q Q PP Q QP P P QP+QP PP P P QPP P
Sbjct: 191 QQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQP-PPASQQPPAP 238
Score = 35.4 bits (80), Expect = 0.034
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 125 PIQHHQPNLPPPAQ-QPYQPQPVQPQPHQPMQPQPPV--HPMQPLPPQPPLPPMFPMQPL 181
P+Q+ Q +Q Q Q Q Q Q Q QP P HP QP P P P+QP
Sbjct: 165 PLQNLQATSSLNSQLQQLQLQLQQQQQQQQQQPPPSTNQHP-QPAPQAPSQSQQQPLQPT 223
Query: 182 PPMLP 186
PP P
Sbjct: 224 PPQQP 228
Score = 34.7 bits (78), Expect = 0.058
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 115 MPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQP-PVHP----MQPLPPQ 169
+P+ + + + L QQ Q Q QP P PQP P P QPL P
Sbjct: 164 LPLQNLQATSSLNSQLQQLQLQLQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPT 223
Query: 170 PP-LPPMFPMQPLPP 183
PP PP QP P
Sbjct: 224 PPQQPPPASQQPPAP 238
Score = 33.9 bits (76), Expect = 0.099
Identities = 32/106 (30%), Positives = 34/106 (32%), Gaps = 21/106 (19%)
Query: 81 PVLSQQHP----PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPP 136
P SQQ P P P P P Q QP P HS
Sbjct: 212 PSQSQQQPLQPTPPQQPPPASQQPPAPTSQLQQAPQPQQHQPHSHS-------------- 257
Query: 137 AQQPYQPQPVQPQPHQPMQP-QPPVHPMQPLPPQPPLPPMFPMQPL 181
Q QP P Q P +P Q P H + P P PP P PL
Sbjct: 258 -QNQNQPSPTQQSSSPPQKPSQSPGHGL-PSPLTPPNPLQLVNNPL 301
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.474
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,098,228
Number of Sequences: 37866
Number of extensions: 963770
Number of successful extensions: 29038
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 973
Number of HSP's that attempted gapping in prelim test: 7698
Number of HSP's gapped (non-prelim): 9648
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.