Search of human proteins with 33188439

Search of human proteins with 33188439

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33188439 cytoplasmic polyadenylation element binding protein
2 isoform B [Homo sapiens]
         (589 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33188439 cytoplasmic polyadenylation element binding protein ...  1241   0.0  
gi|33188441 cytoplasmic polyadenylation element binding protein ...  1164   0.0  
gi|50345881 cytoplasmic polyadenylation element binding protein ...   711   0.0  
gi|189027090 cytoplasmic polyadenylation element binding protein...   695   0.0  
gi|119395725 cytoplasmic polyadenylation element binding protein...   214   2e-55
gi|119395722 cytoplasmic polyadenylation element binding protein...   214   2e-55
gi|119395720 cytoplasmic polyadenylation element binding protein...   214   2e-55
gi|119395718 cytoplasmic polyadenylation element binding protein...   207   2e-53
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...    52   1e-06
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ...    52   1e-06
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [...    52   1e-06
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]         48   3e-05
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1...    48   3e-05
gi|22027541 programmed cell death 7 [Homo sapiens]                     48   3e-05
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    47   5e-05
gi|39812378 RAN binding protein 9 [Homo sapiens]                       47   5e-05
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso...    47   5e-05
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso...    47   5e-05
gi|182765442 homeobox A10 isoform a [Homo sapiens]                     47   6e-05
gi|56118221 amyloid beta (A4) precursor protein-binding, family ...    47   6e-05
gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo ...    46   8e-05
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]          46   8e-05
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]          46   8e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    45   1e-04
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]                44   3e-04
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]                44   3e-04
gi|208431824 forkhead box I3 [Homo sapiens]                            44   3e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    44   3e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    44   3e-04
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    44   3e-04

>gi|33188439 cytoplasmic polyadenylation element binding protein 2
           isoform B [Homo sapiens]
          Length = 589

 Score = 1241 bits (3211), Expect = 0.0
 Identities = 589/589 (100%), Positives = 589/589 (100%)

Query: 1   MPPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAV 60
           MPPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAV
Sbjct: 1   MPPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAV 60

Query: 61  PPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLL 120
           PPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLL
Sbjct: 61  PPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLL 120

Query: 121 KQSPWSNHQSSGWGTGSMSWGAMHGRDHRRTGNMGIPGTMNQISPLKKPFSGNVIAPPKF 180
           KQSPWSNHQSSGWGTGSMSWGAMHGRDHRRTGNMGIPGTMNQISPLKKPFSGNVIAPPKF
Sbjct: 121 KQSPWSNHQSSGWGTGSMSWGAMHGRDHRRTGNMGIPGTMNQISPLKKPFSGNVIAPPKF 180

Query: 181 TRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQVRSSLQLPAWGSDSLQDSWCTAAGTSRID 240
           TRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQVRSSLQLPAWGSDSLQDSWCTAAGTSRID
Sbjct: 181 TRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQVRSSLQLPAWGSDSLQDSWCTAAGTSRID 240

Query: 241 QDRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPGTDNLLMLNGRSSLFPIDDGL 300
           QDRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPGTDNLLMLNGRSSLFPIDDGL
Sbjct: 241 QDRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPGTDNLLMLNGRSSLFPIDDGL 300

Query: 301 LDDGHSDQVGVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVV 360
           LDDGHSDQVGVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVV
Sbjct: 301 LDDGHSDQVGVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVV 360

Query: 361 DWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRP 420
           DWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRP
Sbjct: 361 DWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRP 420

Query: 421 WNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY 480
           WNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY
Sbjct: 421 WNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY 480

Query: 481 PKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFA 540
           PKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFA
Sbjct: 481 PKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFA 540

Query: 541 PFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN 589
           PFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN
Sbjct: 541 PFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN 589


>gi|33188441 cytoplasmic polyadenylation element binding protein 2
           isoform A [Homo sapiens]
          Length = 559

 Score = 1164 bits (3011), Expect = 0.0
 Identities = 559/589 (94%), Positives = 559/589 (94%), Gaps = 30/589 (5%)

Query: 1   MPPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAV 60
           MPPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAV
Sbjct: 1   MPPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAV 60

Query: 61  PPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLL 120
           PPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLL
Sbjct: 61  PPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLL 120

Query: 121 KQSPWSNHQSSGWGTGSMSWGAMHGRDHRRTGNMGIPGTMNQISPLKKPFSGNVIAPPKF 180
           KQSPWSNHQSSGWGTGSMSWGAMHGRDHRRTGNMGIPGTMNQISPLKKPFSGNVIAPPKF
Sbjct: 121 KQSPWSNHQSSGWGTGSMSWGAMHGRDHRRTGNMGIPGTMNQISPLKKPFSGNVIAPPKF 180

Query: 181 TRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQVRSSLQLPAWGSDSLQDSWCTAAGTSRID 240
           TRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQ                             
Sbjct: 181 TRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQ----------------------------- 211

Query: 241 QDRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPGTDNLLMLNGRSSLFPIDDGL 300
            DRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPGTDNLLMLNGRSSLFPIDDGL
Sbjct: 212 -DRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPGTDNLLMLNGRSSLFPIDDGL 270

Query: 301 LDDGHSDQVGVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVV 360
           LDDGHSDQVGVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVV
Sbjct: 271 LDDGHSDQVGVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVV 330

Query: 361 DWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRP 420
           DWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRP
Sbjct: 331 DWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRP 390

Query: 421 WNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY 480
           WNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY
Sbjct: 391 WNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY 450

Query: 481 PKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFA 540
           PKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFA
Sbjct: 451 PKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFA 510

Query: 541 PFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN 589
           PFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN
Sbjct: 511 PFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN 559


>gi|50345881 cytoplasmic polyadenylation element binding protein 3
           [Homo sapiens]
          Length = 698

 Score =  711 bits (1834), Expect = 0.0
 Identities = 390/659 (59%), Positives = 434/659 (65%), Gaps = 138/659 (20%)

Query: 5   SPDSENGFYPGLPSSMNPAFFPSFSPVS--------PHGCTGLSVPTSGGGGGGFGGPFS 56
           SP   + +  G  +++  +FF   +PV+        PH    +           FGG FS
Sbjct: 104 SPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPV-----------FGGTFS 152

Query: 57  ATA---------VPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFL 107
                        PPPP PA    Q   PP A P  PQ RRSP SP      Q +AAA  
Sbjct: 153 PQIGLAQTQHHQQPPPPAPAPQPAQPAQPPQAQP--PQQRRSPASPSQAPYAQRSAAA-- 208

Query: 108 QQRNSYNHHQPLLKQSP---------------------WSNHQS--SGWGTGSMSWGAMH 144
               +Y H QP++   P                     W+ HQS  + W   S  WG + 
Sbjct: 209 ----AYGH-QPIMTSKPSSSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQ 263

Query: 145 -GRDHRRTGNMGI------PGTMNQISPLKKPFSGNVIAPPKFTRSTPSLTPKSWIEDNV 197
            GRD RR   +G+      P  +N ISPLKKPFS NVIAPPKF R+ P LT KSW+EDN 
Sbjct: 264 AGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPFSSNVIAPPKFPRAAP-LTSKSWMEDNA 322

Query: 198 FRTDNNSNTLLPLQVRSSLQLPAWGSDSLQDSWCTAAGTSRIDQDRSRMYDSLNMHSLEN 257
           FRTDN +N LLP Q                              DRSR YD+ N+HSLEN
Sbjct: 323 FRTDNGNN-LLPFQ------------------------------DRSRPYDTFNLHSLEN 351

Query: 258 SLIDIMRAEHDPLKGR-------------------------LSYPHPGTDNLLMLNGRSS 292
           SL+D++R +H+PLKG+                         +++ HPGTDN++ LN    
Sbjct: 352 SLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALN---- 407

Query: 293 LFPIDDGLLDDGHSDQV--GVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITA 350
                +  LDD H DQ     L+SPT     QNGER+ER+SRKVFVGGLPPDIDEDEITA
Sbjct: 408 -----NAFLDDSHGDQALSSGLSSPT---RCQNGERVERYSRKVFVGGLPPDIDEDEITA 459

Query: 351 SFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPT 410
           SFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDAC+EEDGKLYLCVSSPT
Sbjct: 460 SFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPT 519

Query: 411 IKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYA 470
           IKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYA
Sbjct: 520 IKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYA 579

Query: 471 GIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDEC 530
           GIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQH DIDKRVEVKPYVLDDQMCDEC
Sbjct: 580 GIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDEC 639

Query: 531 QGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN 589
           QG RCGGKFAPFFCANVTCLQYYCE+CWA+IHSRAGREFHKPLVKEG DRPR + FRW+
Sbjct: 640 QGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS 698



 Score = 32.7 bits (73), Expect = 0.96
 Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 27/97 (27%)

Query: 4   PSPDSENGFYPGLPSSMN----------PAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGG 53
           P P+S     P  P S            PA  P+ +P +P+G   + + +          
Sbjct: 26  PQPESSVSEAPSTPLSSETPKPEENSAVPALSPAAAPPAPNGPDKMQMES---------- 75

Query: 54  PFSATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSP 90
                  P  P  + + P QQPPPP  P  P +  SP
Sbjct: 76  -------PLLPGLSFHQPPQQPPPPQEPAAPGASLSP 105


>gi|189027090 cytoplasmic polyadenylation element binding protein 4
           [Homo sapiens]
          Length = 729

 Score =  695 bits (1794), Expect = 0.0
 Identities = 370/559 (66%), Positives = 407/559 (72%), Gaps = 65/559 (11%)

Query: 50  GFGGPFSATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQ 109
           GFGG FS    P   P + + P          Q  Q RRSP SP         AA     
Sbjct: 217 GFGGSFS----PQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLP 272

Query: 110 RNSYNHHQPLLKQSPWSNHQS------SGW---GTGSMSWGAMHGRDHRRTGNMGIPGTM 160
             + N ++P    SPWS++QS      S W   G G   WG   GRDHRR  N GI   +
Sbjct: 273 HLANNLNKP---PSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGIT-PL 328

Query: 161 NQISPLKKPFSGNVIAPPKFTRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQVRSSLQLPA 220
           N ISPLKK F+ N I   K+ R + +  PKSW+ED++ R DN    + P           
Sbjct: 329 NSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADN----IFPFP--------- 375

Query: 221 WGSDSLQDSWCTAAGTSRIDQDRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPG 280
                                DR R +D   MHSLE+SLIDIMRAE+D +KGRL+Y +PG
Sbjct: 376 ---------------------DRPRTFD---MHSLESSLIDIMRAENDTIKGRLNYSYPG 411

Query: 281 TDNLLMLN--------GRSSLFPIDDGLLDDGHSDQV--GVLNSPTCYSAHQNGERIERF 330
           +D+ L++N        G+SSLFP++DG LDDG  DQ     L SP C+S HQNGER+ER+
Sbjct: 412 SDSSLLINARTYGRRRGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFS-HQNGERVERY 470

Query: 331 SRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQA 390
           SRKVFVGGLPPDIDEDEITASFRRFGPL+VDWPHKAESKSYFPPKGYAFLLFQ+ESSVQA
Sbjct: 471 SRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQA 530

Query: 391 LIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRP 450
           LIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRP
Sbjct: 531 LIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRP 590

Query: 451 LRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGD 510
           LRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHG+
Sbjct: 591 LRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGE 650

Query: 511 IDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFH 570
           IDKRVEVKPYVLDDQ+CDECQGARCGGKFAPFFCANVTCLQYYCE+CWA IHSRAGREFH
Sbjct: 651 IDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFH 710

Query: 571 KPLVKEGADRPRQIHFRWN 589
           KPLVKEG DRPR I FRWN
Sbjct: 711 KPLVKEGGDRPRHISFRWN 729


>gi|119395725 cytoplasmic polyadenylation element binding protein 1
           isoform 1 [Homo sapiens]
          Length = 561

 Score =  214 bits (544), Expect = 2e-55
 Identities = 119/282 (42%), Positives = 168/282 (59%), Gaps = 16/282 (5%)

Query: 308 QVGVLNSPTCYSAHQNGERIER---FSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPH 364
           Q   +N  TC  + Q   R  +   +S KVF+GG+P DI E  +  +FR FG L V+WP 
Sbjct: 284 QAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPG 343

Query: 365 KAESKSYFPPKGYAFLLFQEESSVQALIDAC----IEEDG--KLYLCVSSPTIKDKPVQI 418
           K       PPKGY +L+F+ E SV++L+ AC    +  DG  + Y  +SS  ++ K VQ+
Sbjct: 344 KDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQV 403

Query: 419 RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPEL 478
            PW L+DS+FV   SQ LDP +T+FVG +   L A  LA I++ L+GGV YAGIDTD   
Sbjct: 404 IPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH- 462

Query: 479 KYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGK 538
           KYP G+GRV F+NQ+SY+ A+SA FV+++     K+V++ PY L+D +C       C  +
Sbjct: 463 KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQ 516

Query: 539 FAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADR 580
             PFFC +  C +Y+C  CW   HS  G   H PL++   +R
Sbjct: 517 PGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNR 558


>gi|119395722 cytoplasmic polyadenylation element binding protein 1
           isoform 3 [Homo sapiens]
          Length = 486

 Score =  214 bits (544), Expect = 2e-55
 Identities = 119/282 (42%), Positives = 168/282 (59%), Gaps = 16/282 (5%)

Query: 308 QVGVLNSPTCYSAHQNGERIER---FSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPH 364
           Q   +N  TC  + Q   R  +   +S KVF+GG+P DI E  +  +FR FG L V+WP 
Sbjct: 209 QAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPG 268

Query: 365 KAESKSYFPPKGYAFLLFQEESSVQALIDAC----IEEDG--KLYLCVSSPTIKDKPVQI 418
           K       PPKGY +L+F+ E SV++L+ AC    +  DG  + Y  +SS  ++ K VQ+
Sbjct: 269 KDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQV 328

Query: 419 RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPEL 478
            PW L+DS+FV   SQ LDP +T+FVG +   L A  LA I++ L+GGV YAGIDTD   
Sbjct: 329 IPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH- 387

Query: 479 KYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGK 538
           KYP G+GRV F+NQ+SY+ A+SA FV+++     K+V++ PY L+D +C       C  +
Sbjct: 388 KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQ 441

Query: 539 FAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADR 580
             PFFC +  C +Y+C  CW   HS  G   H PL++   +R
Sbjct: 442 PGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNR 483


>gi|119395720 cytoplasmic polyadenylation element binding protein 1
           isoform 3 [Homo sapiens]
          Length = 486

 Score =  214 bits (544), Expect = 2e-55
 Identities = 119/282 (42%), Positives = 168/282 (59%), Gaps = 16/282 (5%)

Query: 308 QVGVLNSPTCYSAHQNGERIER---FSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPH 364
           Q   +N  TC  + Q   R  +   +S KVF+GG+P DI E  +  +FR FG L V+WP 
Sbjct: 209 QAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPG 268

Query: 365 KAESKSYFPPKGYAFLLFQEESSVQALIDAC----IEEDG--KLYLCVSSPTIKDKPVQI 418
           K       PPKGY +L+F+ E SV++L+ AC    +  DG  + Y  +SS  ++ K VQ+
Sbjct: 269 KDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQV 328

Query: 419 RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPEL 478
            PW L+DS+FV   SQ LDP +T+FVG +   L A  LA I++ L+GGV YAGIDTD   
Sbjct: 329 IPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH- 387

Query: 479 KYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGK 538
           KYP G+GRV F+NQ+SY+ A+SA FV+++     K+V++ PY L+D +C       C  +
Sbjct: 388 KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQ 441

Query: 539 FAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADR 580
             PFFC +  C +Y+C  CW   HS  G   H PL++   +R
Sbjct: 442 PGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNR 483


>gi|119395718 cytoplasmic polyadenylation element binding protein 1
           isoform 2 [Homo sapiens]
          Length = 491

 Score =  207 bits (528), Expect = 2e-53
 Identities = 119/287 (41%), Positives = 168/287 (58%), Gaps = 21/287 (7%)

Query: 308 QVGVLNSPTCYSAHQNGERIER---FSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPH 364
           Q   +N  TC  + Q   R  +   +S KVF+GG+P DI E  +  +FR FG L V+WP 
Sbjct: 209 QAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPG 268

Query: 365 KAESKSYFPPKG-----YAFLLFQEESSVQALIDAC----IEEDG--KLYLCVSSPTIKD 413
           K       PPKG     Y +L+F+ E SV++L+ AC    +  DG  + Y  +SS  ++ 
Sbjct: 269 KDGKHPRCPPKGNMPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRC 328

Query: 414 KPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGID 473
           K VQ+ PW L+DS+FV   SQ LDP +T+FVG +   L A  LA I++ L+GGV YAGID
Sbjct: 329 KEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGID 388

Query: 474 TDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGA 533
           TD   KYP G+GRV F+NQ+SY+ A+SA FV+++     K+V++ PY L+D +C      
Sbjct: 389 TDKH-KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCH----- 441

Query: 534 RCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADR 580
            C  +  PFFC +  C +Y+C  CW   HS  G   H PL++   +R
Sbjct: 442 ICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNR 488


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
           [Homo sapiens]
          Length = 1125

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 46/116 (39%), Positives = 48/116 (41%), Gaps = 17/116 (14%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PPP P    GF    P  M   F P    V P G  GL     GG G G GGP       
Sbjct: 868 PPPGP---GGFAMPPPHGMKGPFPPHGPFVRPGGMPGL-----GGPGPGPGGPEDRDGRQ 919

Query: 62  PPPPPAMNIPQQQPPP--PAAPQQPQSRRSPVS---PQLQQQHQAAAAAFLQQRNS 112
            PP      PQQQP P  P  PQQ Q ++ P S   P  QQQ Q       QQ NS
Sbjct: 920 QPPQQ----PQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNS 971



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 49/164 (29%), Positives = 59/164 (35%), Gaps = 35/164 (21%)

Query: 3   PPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVP----TSGGGGGGFGGPFSAT 58
           PP P   +  + G P          F+   PHG  G   P       GG  G GGP    
Sbjct: 855 PPRPMPPHMMHRGPPPGPG-----GFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGP---- 905

Query: 59  AVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQP 118
             P P  P     +QQP     PQQPQ +  P +PQ  QQ Q       QQ+   +   P
Sbjct: 906 -GPGPGGPEDRDGRQQP-----PQQPQQQPQPQAPQQPQQQQ-------QQQPPPSQQPP 952

Query: 119 LLKQSPW----SNHQSSGWGT-----GSMSWGAMHGRDHRRTGN 153
             +Q P      N Q    G      G  S+G     D  R GN
Sbjct: 953 PTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGN 996



 Score = 33.5 bits (75), Expect = 0.56
 Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 54/211 (25%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PP  P  + G  P +  ++ P   P+F+P        L +P  G G G          VP
Sbjct: 679 PPQVPPHQPG--PPVVGALQP---PAFTPP-------LGIPPPGFGPG----------VP 716

Query: 62  PPPPP---------AMNIP----QQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAA---- 104
           PPPPP          M++P       PPPP  P  P S   P +P +   +  + A    
Sbjct: 717 PPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITP--PVSIPPPHTPPISIPNLVSGARGNA 774

Query: 105 ----AFLQQRNSYNHHQPLLKQSPWSNHQSSGWGTGSMSWGAMHGRDHRRTGNMGI-PGT 159
               +     ++     P    +P      S  GT  ++ G + G     TG +G  PG 
Sbjct: 775 ESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPG- 833

Query: 160 MNQISPLKKPFSGNVIAPPKFTRSTPSLTPK 190
              + PL++P       PP   +  P + P+
Sbjct: 834 ---LIPLQRPPG----MPPPHLQRFPLMPPR 857



 Score = 30.8 bits (68), Expect = 3.6
 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 30/83 (36%)

Query: 1   MPPPSPDSENGFYPGLPSSMNPAFF--PSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSAT 58
           +PPP      GF PG+P    P  F  P F+P        + +P       GF       
Sbjct: 706 IPPP------GFGPGVPPPPPPPPFLRPGFNP--------MHLPP------GF------- 738

Query: 59  AVPPPPPPAMNIPQQQPPPPAAP 81
            +PP PPP +  P   PPP   P
Sbjct: 739 -LPPGPPPPITPPVSIPPPHTPP 760



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 61  PPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLL 120
           PPPP    + P  Q  P + P  PQ   S     + Q  Q      LQQ       QP  
Sbjct: 155 PPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQ-ILQTFQQPPK 213

Query: 121 KQSP 124
            QSP
Sbjct: 214 PQSP 217


>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
           [Homo sapiens]
          Length = 1132

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 46/116 (39%), Positives = 48/116 (41%), Gaps = 17/116 (14%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PPP P    GF    P  M   F P    V P G  GL     GG G G GGP       
Sbjct: 875 PPPGP---GGFAMPPPHGMKGPFPPHGPFVRPGGMPGL-----GGPGPGPGGPEDRDGRQ 926

Query: 62  PPPPPAMNIPQQQPPP--PAAPQQPQSRRSPVS---PQLQQQHQAAAAAFLQQRNS 112
            PP      PQQQP P  P  PQQ Q ++ P S   P  QQQ Q       QQ NS
Sbjct: 927 QPPQQ----PQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNS 978



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 49/164 (29%), Positives = 59/164 (35%), Gaps = 35/164 (21%)

Query: 3    PPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVP----TSGGGGGGFGGPFSAT 58
            PP P   +  + G P          F+   PHG  G   P       GG  G GGP    
Sbjct: 862  PPRPMPPHMMHRGPPPGPG-----GFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGP---- 912

Query: 59   AVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQP 118
              P P  P     +QQP     PQQPQ +  P +PQ  QQ Q       QQ+   +   P
Sbjct: 913  -GPGPGGPEDRDGRQQP-----PQQPQQQPQPQAPQQPQQQQ-------QQQPPPSQQPP 959

Query: 119  LLKQSPW----SNHQSSGWGT-----GSMSWGAMHGRDHRRTGN 153
              +Q P      N Q    G      G  S+G     D  R GN
Sbjct: 960  PTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGN 1003



 Score = 32.7 bits (73), Expect = 0.96
 Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 37/107 (34%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PP  P  + G  P +  ++ P   P+F+P        L +P  G G G          VP
Sbjct: 664 PPQVPPHQPG--PPVVGALQP---PAFTPP-------LGIPPPGFGPG----------VP 701

Query: 62  PPPPP---------AMNIP----QQQPPPPAAPQQPQSRRSPVSPQL 95
           PPPPP          M++P       PPPP  P  P S   P +P +
Sbjct: 702 PPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITP--PVSIPPPHTPPI 746



 Score = 30.8 bits (68), Expect = 3.6
 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 30/83 (36%)

Query: 1   MPPPSPDSENGFYPGLPSSMNPAFF--PSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSAT 58
           +PPP      GF PG+P    P  F  P F+P        + +P       GF       
Sbjct: 691 IPPP------GFGPGVPPPPPPPPFLRPGFNP--------MHLPP------GF------- 723

Query: 59  AVPPPPPPAMNIPQQQPPPPAAP 81
            +PP PPP +  P   PPP   P
Sbjct: 724 -LPPGPPPPITPPVSIPPPHTPP 745



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 61  PPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLL 120
           PPPP    + P  Q  P + P  PQ   S     + Q  Q      LQQ       QP  
Sbjct: 140 PPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQ-ILQTFQQPPK 198

Query: 121 KQSP 124
            QSP
Sbjct: 199 PQSP 202


>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
           [Homo sapiens]
          Length = 1147

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 46/116 (39%), Positives = 48/116 (41%), Gaps = 17/116 (14%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PPP P    GF    P  M   F P    V P G  GL     GG G G GGP       
Sbjct: 890 PPPGP---GGFAMPPPHGMKGPFPPHGPFVRPGGMPGL-----GGPGPGPGGPEDRDGRQ 941

Query: 62  PPPPPAMNIPQQQPPP--PAAPQQPQSRRSPVS---PQLQQQHQAAAAAFLQQRNS 112
            PP      PQQQP P  P  PQQ Q ++ P S   P  QQQ Q       QQ NS
Sbjct: 942 QPPQQ----PQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNS 993



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 49/164 (29%), Positives = 59/164 (35%), Gaps = 35/164 (21%)

Query: 3    PPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVP----TSGGGGGGFGGPFSAT 58
            PP P   +  + G P          F+   PHG  G   P       GG  G GGP    
Sbjct: 877  PPRPMPPHMMHRGPPPGPG-----GFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGP---- 927

Query: 59   AVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQP 118
              P P  P     +QQP     PQQPQ +  P +PQ  QQ Q       QQ+   +   P
Sbjct: 928  -GPGPGGPEDRDGRQQP-----PQQPQQQPQPQAPQQPQQQQ-------QQQPPPSQQPP 974

Query: 119  LLKQSPW----SNHQSSGWGT-----GSMSWGAMHGRDHRRTGN 153
              +Q P      N Q    G      G  S+G     D  R GN
Sbjct: 975  PTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGN 1018



 Score = 32.7 bits (73), Expect = 0.96
 Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 37/107 (34%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PP  P  + G  P +  ++ P   P+F+P        L +P  G G G          VP
Sbjct: 679 PPQVPPHQPG--PPVVGALQP---PAFTPP-------LGIPPPGFGPG----------VP 716

Query: 62  PPPPP---------AMNIP----QQQPPPPAAPQQPQSRRSPVSPQL 95
           PPPPP          M++P       PPPP  P  P S   P +P +
Sbjct: 717 PPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITP--PVSIPPPHTPPI 761



 Score = 30.8 bits (68), Expect = 3.6
 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 30/83 (36%)

Query: 1   MPPPSPDSENGFYPGLPSSMNPAFF--PSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSAT 58
           +PPP      GF PG+P    P  F  P F+P        + +P       GF       
Sbjct: 706 IPPP------GFGPGVPPPPPPPPFLRPGFNP--------MHLPP------GF------- 738

Query: 59  AVPPPPPPAMNIPQQQPPPPAAP 81
            +PP PPP +  P   PPP   P
Sbjct: 739 -LPPGPPPPITPPVSIPPPHTPP 760



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 61  PPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLL 120
           PPPP    + P  Q  P + P  PQ   S     + Q  Q      LQQ       QP  
Sbjct: 155 PPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQ-ILQTFQQPPK 213

Query: 121 KQSP 124
            QSP
Sbjct: 214 PQSP 217


>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
          Length = 1303

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 32/83 (38%), Positives = 35/83 (42%), Gaps = 24/83 (28%)

Query: 38  GLSVPTSGGGGGGFGGPFSATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQ 97
           G   PTS  G    GGP      PPPPPP        PPPP  PQ P     P+SPQ   
Sbjct: 525 GPQAPTSPNGRPMQGGP------PPPPPPP-------PPPPGPPQMPMPVHEPLSPQQ-- 569

Query: 98  QHQAAAAAFLQQRNSYNHHQPLL 120
                    LQQ++ YN   P L
Sbjct: 570 ---------LQQQDMYNKKIPSL 583



 Score = 35.4 bits (80), Expect = 0.15
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 5/32 (15%)

Query: 62 PPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSP 93
          PPPPP+ + P   PPPP+ P  P     P SP
Sbjct: 8  PPPPPSESPPPPSPPPPSTPSPP-----PCSP 34


>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
           [Homo sapiens]
          Length = 812

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 15/123 (12%)

Query: 5   SPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVPPPP 64
           +P+  +G  P  PSS+ P   P+  P      TG  +PT  GG  G G P S   + PPP
Sbjct: 569 TPEPPSG--PVYPSSLMPQ--PAQQPSYVIASTGQQLPT--GGFSGSGPPISQQVLQPPP 622

Query: 65  PPAMNIPQQQPPPPAAP-------QQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQ 117
            P   +  QQPPP   P       Q P S      P    Q+ A  +  + Q      +Q
Sbjct: 623 SPQGFV--QQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQ 680

Query: 118 PLL 120
           P+L
Sbjct: 681 PVL 683


>gi|22027541 programmed cell death 7 [Homo sapiens]
          Length = 485

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 36/113 (31%), Positives = 42/113 (37%), Gaps = 22/113 (19%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVP----------------TSG 45
           PPP P     F    P   +PAF P   P  P    G S P                + G
Sbjct: 15  PPPQPPPPAPFGCPPPPLPSPAFPPPL-PQRPGPFPGASAPFLQPPLALQPRASAEASRG 73

Query: 46  GGGGGFGGPFSATAVPPPPPPAMNIP-----QQQPPPPAAPQQPQSRRSPVSP 93
           GGG G   P     +PPPPP     P     ++  PPP  P  P S R P +P
Sbjct: 74  GGGAGAFYPVPPPPLPPPPPQCRPFPGTDAGERPRPPPPGPGPPWSPRWPEAP 126



 Score = 35.4 bits (80), Expect = 0.15
 Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 21/89 (23%)

Query: 54  PFSATAVPPPPPPAMNIPQQQPPPPA-----APQQPQSRRSPVSPQLQQQHQAAAAAFLQ 108
           PF     P PPPP       QPPPPA      P  P     P  PQ       A+A FL 
Sbjct: 5   PFFGQGRPGPPPP-------QPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFL- 56

Query: 109 QRNSYNHHQPLLKQSPWSNHQSSGWGTGS 137
                   QP L   P ++ ++S  G G+
Sbjct: 57  --------QPPLALQPRASAEASRGGGGA 77


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
          potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 23/49 (46%), Positives = 23/49 (46%)

Query: 46 GGGGGFGGPFSATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQ 94
          GGGG  G    AT  P PPPP    P QQ PPP  P  P     P  PQ
Sbjct: 5  GGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQ 53



 Score = 33.1 bits (74), Expect = 0.73
 Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 62  PPPPPAMNIPQQQPPPPAAPQ-QPQSRRSP-VSPQLQQQHQAAAAAFLQQRNSYNHHQPL 119
           PPP PA       PPPPA+P   P S R+P  SP         A   L  R      +PL
Sbjct: 761 PPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPL 820

Query: 120 LKQSPWSNHQSSG 132
               P   H + G
Sbjct: 821 SASQPSLPHGAPG 833


>gi|39812378 RAN binding protein 9 [Homo sapiens]
          Length = 729

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 32/97 (32%), Positives = 41/97 (42%), Gaps = 8/97 (8%)

Query: 2   PPPSPDSENG---FYPGLPSSMNPA---FFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPF 55
           PPP P  +       P  P+++ P      P+   VS  G +    P  G GG G G   
Sbjct: 6   PPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAVSA-GSSPAGSPGGGAGGEGLGAAA 64

Query: 56  SATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVS 92
           +A  + PPPPP        PPPP  P  P S  +P S
Sbjct: 65  AALLLHPPPPPP-PATAAPPPPPPPPPPPASAAAPAS 100



 Score = 33.5 bits (75), Expect = 0.56
 Identities = 15/22 (68%), Positives = 15/22 (68%), Gaps = 2/22 (9%)

Query: 61 PPPPPPAMNIPQQQ--PPPPAA 80
          PPPPPP     QQQ  PPPPAA
Sbjct: 5  PPPPPPQQQQQQQQLSPPPPAA 26


>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
           isoform d [Homo sapiens]
          Length = 756

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 38/125 (30%), Positives = 49/125 (39%), Gaps = 27/125 (21%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           P  S  ++N   PG  ++ +     S+SP  P      S        GG+   ++A   P
Sbjct: 624 PGASTYNKNSNIPGSSANTSTPTVSSYSPPQP------SYSQPPYNQGGYSQGYTAPPPP 677

Query: 62  PPPPPAMN---------IPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNS 112
           PPPPPA N          P   PPPP A   PQ    P   Q QQ        + QQ N 
Sbjct: 678 PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQ----PSYNQYQQ--------YAQQWNQ 725

Query: 113 YNHHQ 117
           Y  +Q
Sbjct: 726 YYQNQ 730



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 10/72 (13%)

Query: 61  PPP--PPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQ----AAAAAFLQQRNSYN 114
           PPP  PPP    PQQ PPPP+        R+P       ++     ++A       +SY+
Sbjct: 596 PPPQQPPPPQPPPQQPPPPPSY----SPARNPPGASTYNKNSNIPGSSANTSTPTVSSYS 651

Query: 115 HHQPLLKQSPWS 126
             QP   Q P++
Sbjct: 652 PPQPSYSQPPYN 663


>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
           isoform a [Homo sapiens]
          Length = 856

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 38/125 (30%), Positives = 49/125 (39%), Gaps = 27/125 (21%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           P  S  ++N   PG  ++ +     S+SP  P      S        GG+   ++A   P
Sbjct: 724 PGASTYNKNSNIPGSSANTSTPTVSSYSPPQP------SYSQPPYNQGGYSQGYTAPPPP 777

Query: 62  PPPPPAMN---------IPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNS 112
           PPPPPA N          P   PPPP A   PQ    P   Q QQ        + QQ N 
Sbjct: 778 PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQ----PSYNQYQQ--------YAQQWNQ 825

Query: 113 YNHHQ 117
           Y  +Q
Sbjct: 826 YYQNQ 830



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 10/72 (13%)

Query: 61  PPP--PPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQ----AAAAAFLQQRNSYN 114
           PPP  PPP    PQQ PPPP+        R+P       ++     ++A       +SY+
Sbjct: 696 PPPQQPPPPQPPPQQPPPPPSY----SPARNPPGASTYNKNSNIPGSSANTSTPTVSSYS 751

Query: 115 HHQPLLKQSPWS 126
             QP   Q P++
Sbjct: 752 PPQPSYSQPPYN 763


>gi|182765442 homeobox A10 isoform a [Homo sapiens]
          Length = 410

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 29/69 (42%), Positives = 31/69 (44%), Gaps = 22/69 (31%)

Query: 42  PTSGGGGGGFG----------------GPFSATAVPP--PPPPAMNIPQQQPPPPAAPQQ 83
           P SGGGGGG G                 P S    PP  PPPP    PQQQPPPP  P Q
Sbjct: 94  PGSGGGGGGLGPGAHGYGPSPIDLWLDAPRSCRMEPPDGPPPP----PQQQPPPPPQPPQ 149

Query: 84  PQSRRSPVS 92
           P  + +  S
Sbjct: 150 PAPQATSCS 158


>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
           member 1 interacting protein [Homo sapiens]
          Length = 666

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 26/80 (32%), Positives = 31/80 (38%)

Query: 14  PGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVPPPPPPAMNIPQQ 73
           P  P S  P   P        G     +   G GGGG   P      PPPPPP ++ P+ 
Sbjct: 509 PHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPEL 568

Query: 74  QPPPPAAPQQPQSRRSPVSP 93
            PPPP   + P     P  P
Sbjct: 569 PPPPPDFMEPPPDFVPPPPP 588



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 28/101 (27%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PPP P  +    P  P  M P   P F P  P    G++                 + +P
Sbjct: 558 PPPPPLDDPELPPPPPDFMEPP--PDFVPPPPPSYAGIA----------------GSELP 599

Query: 62  PPPPP-----AMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQ 97
           PPPPP        +P    PPPA  ++P     PV P+ Q+
Sbjct: 600 PPPPPPPAPAPAPVPDSARPPPAVAKRP-----PVPPKRQE 635



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 8/54 (14%)

Query: 44  SGGGGGGFGGPFSATAV--------PPPPPPAMNIPQQQPPPPAAPQQPQSRRS 89
           SG    G+G   +AT +        PPP  P +++P   PPP    Q+ +  ++
Sbjct: 105 SGAASLGYGTNVAATGISQYEDDLPPPPADPVLDLPLPPPPPEPLSQEEEEAQA 158


>gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo
           sapiens]
          Length = 316

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 8   SENGFYPGLP-SSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVPPPPPP 66
           S +G  PGLP +S+ P   P F+P  PH       PTS G G        +  +PPP P 
Sbjct: 175 SRSGTVPGLPPASLQPLRVPYFAPPGPHD------PTSRGPGRLLTREPPSRKLPPPLPL 228

Query: 67  AMNIPQQQPPPPAAPQQPQSRRSP 90
             +     PPPP AP  P +   P
Sbjct: 229 CRSRWVLAPPPPPAPPGPNAAAHP 252


>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
          Length = 378

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 16/189 (8%)

Query: 333 KVFVGGLPPDIDEDEITASFRRFGPLV--VDWPHKAESKSYFPPKGYAFLLFQEESSVQA 390
           K+FVGGL     ++ + + F ++G +V  V    K  ++S    +G+ F+ F++ + V  
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQS----RGFGFVKFKDPNCVGT 66

Query: 391 LIDACIEE-DGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPR 449
           ++ +     DG+            +P + RP          D S+       IFVGG+P 
Sbjct: 67  VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKS----NKIFVGGIPH 122

Query: 450 PLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHG 509
                EL     + +G V    +  D E + P+G G + F ++QS   A++  F    H 
Sbjct: 123 NCGETELREYFKK-FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHF----HD 177

Query: 510 DIDKRVEVK 518
            + K+VEVK
Sbjct: 178 IMGKKVEVK 186



 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%)

Query: 322 QNGERIERF-SRKVFVGGLPPDIDEDEITASFRRFGPLV-VDWPHKAESKSYFPPKGYAF 379
           Q G R +   S K+FVGG+P +  E E+   F++FG +  V   + AE +    P+G+ F
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR---PRGFGF 158

Query: 380 LLFQEESSVQALID 393
           + F++E SV   ++
Sbjct: 159 ITFEDEQSVDQAVN 172



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 4   PSPDSENGFYP---GLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGP--FSAT 58
           P+  +  G+ P   G  +   P  F S+   +P G      P   G   G+G P  FS  
Sbjct: 238 PAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPG----GFPPPQGFPQGYGAPPQFSFG 293

Query: 59  AVPPPPPPAMNIPQQQPPPPAAP 81
             PPPPPP    P   PPPPA P
Sbjct: 294 YGPPPPPPDQFAPPGVPPPPATP 316



 Score = 37.4 bits (85), Expect = 0.039
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 34  HGCTGLSVPTSGGGGGGFGGPFSATAVPPPPPPAMNIPQQQPPPPAAPQQ--PQSRRSP 90
           +G  G+ VP +G   GG+G P +    PPPPPP  +     PP    P Q  PQ   +P
Sbjct: 230 YGPQGMWVP-AGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAP 287



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 6/50 (12%)

Query: 50  GFGGP------FSATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSP 93
           G+G P      F+   VPPPP      P   PPPP+      S+     P
Sbjct: 293 GYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQP 342


>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
          Length = 407

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 16/189 (8%)

Query: 333 KVFVGGLPPDIDEDEITASFRRFGPLV--VDWPHKAESKSYFPPKGYAFLLFQEESSVQA 390
           K+FVGGL     ++ + + F ++G +V  V    K  ++S    +G+ F+ F++ + V  
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQS----RGFGFVKFKDPNCVGT 66

Query: 391 LIDACIEE-DGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPR 449
           ++ +     DG+            +P + RP          D S+       IFVGG+P 
Sbjct: 67  VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKS----NKIFVGGIPH 122

Query: 450 PLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHG 509
                EL     + +G V    +  D E + P+G G + F ++QS   A++  F    H 
Sbjct: 123 NCGETELREYFKK-FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHF----HD 177

Query: 510 DIDKRVEVK 518
            + K+VEVK
Sbjct: 178 IMGKKVEVK 186



 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%)

Query: 322 QNGERIERF-SRKVFVGGLPPDIDEDEITASFRRFGPLV-VDWPHKAESKSYFPPKGYAF 379
           Q G R +   S K+FVGG+P +  E E+   F++FG +  V   + AE +    P+G+ F
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR---PRGFGF 158

Query: 380 LLFQEESSVQALID 393
           + F++E SV   ++
Sbjct: 159 ITFEDEQSVDQAVN 172



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 4   PSPDSENGFYP---GLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGP--FSAT 58
           P+  +  G+ P   G  +   P  F S+   +P G      P   G   G+G P  FS  
Sbjct: 238 PAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPG----GFPPPQGFPQGYGAPPQFSFG 293

Query: 59  AVPPPPPPAMNIPQQQPPPPAAP 81
             PPPPPP    P   PPPPA P
Sbjct: 294 YGPPPPPPDQFAPPGVPPPPATP 316



 Score = 37.4 bits (85), Expect = 0.039
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 34  HGCTGLSVPTSGGGGGGFGGPFSATAVPPPPPPAMNIPQQQPPPPAAPQQ--PQSRRSP 90
           +G  G+ VP +G   GG+G P +    PPPPPP  +     PP    P Q  PQ   +P
Sbjct: 230 YGPQGMWVP-AGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAP 287



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 6/50 (12%)

Query: 50  GFGGP------FSATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSP 93
           G+G P      F+   VPPPP      P   PPPP+      S+     P
Sbjct: 293 GYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQP 342


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 8/98 (8%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PPPSP  +  F P     ++P+  P            L VP S         P S +A P
Sbjct: 667 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP----PMSPSATP 722

Query: 62  PP--PPPAMNIPQQQPPPPAA--PQQPQSRRSPVSPQL 95
           PP  PPP    P Q PP P A  P  P +   P  P L
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPL 760



 Score = 36.6 bits (83), Expect = 0.066
 Identities = 32/94 (34%), Positives = 35/94 (37%), Gaps = 23/94 (24%)

Query: 2   PPPSPDSENGFYP--GLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATA 59
           PPP         P   LPS   PA FP  +P SP                    P S  A
Sbjct: 784 PPPQAPPALATPPLQALPSP--PASFPGQAPFSPSASL----------------PMSPLA 825

Query: 60  VPPPP-PPAMNIP--QQQPPPPAAPQQPQSRRSP 90
            PPP  PP +  P  Q  P PPA+P     RR P
Sbjct: 826 TPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 859



 Score = 35.4 bits (80), Expect = 0.15
 Identities = 32/95 (33%), Positives = 40/95 (42%), Gaps = 16/95 (16%)

Query: 3   PPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVPP 62
           PPSP       P  P  M+P+  P      P     L VP S         P S +A PP
Sbjct: 707 PPSP-------PASPP-MSPSATPPPQAPPPLAAPPLQVPPSPPASP----PMSPSATPP 754

Query: 63  PP-PPAMNIP--QQQPPPPAA-PQQPQSRRSPVSP 93
           P  PP +  P  Q  P PPA+ P  P ++  P +P
Sbjct: 755 PRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAP 789



 Score = 33.1 bits (74), Expect = 0.73
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 54  PFSATAVPPPP-PPAMNIP--QQQPPPPAAPQ-QPQSRRSPVSPQLQQQH 99
           P S  A PPP  PP + +P  Q  P PPA+P   P +  SP +P     H
Sbjct: 610 PLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVH 659



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 27/106 (25%)

Query: 2   PPPSPDSENGFY----PGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSA 57
           PP SP  +        P L +S++PA  P  SP++ H    LS   S         P S+
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSP----QAPLSS 506

Query: 58  TAVPP--------PP-----------PPAMNIPQQQPPPPAAPQQP 84
             +PP        PP           PP  N+P   PPP      P
Sbjct: 507 LIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAP 552



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 36/121 (29%), Positives = 45/121 (37%), Gaps = 27/121 (22%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPV---SPHGCTGLSV-----PTSGGGGGGFGG 53
           PPP         P L +  +P   P  SP+   SP     L+V     P S         
Sbjct: 617 PPPQAPPXLAL-PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 675

Query: 54  PFSATAVPP------PP---PPAMNIPQQQPPP---------PAAPQQPQSRRSPVSPQL 95
           PFS  A PP      PP   PP++  P  Q PP         P+A   PQ+     +P L
Sbjct: 676 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 735

Query: 96  Q 96
           Q
Sbjct: 736 Q 736



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 16/89 (17%)

Query: 3   PPSPDSENGFYPGL-PSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PP  D+     P L P S +P   PS     P G     VP           P  AT +P
Sbjct: 287 PPRKDAA----PALGPLSSSPLATPS-----PSGTKARPVPPPDNAAT----PLPAT-LP 332

Query: 62  PPPPPAMNIPQQQPPPPAAPQQPQSRRSP 90
           P PP A  +P   PP P+AP   Q+  SP
Sbjct: 333 PSPPLATPLP-LAPPSPSAPPSLQTLPSP 360



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 34/112 (30%), Positives = 39/112 (34%), Gaps = 14/112 (12%)

Query: 2   PPPSPDSENGFYPG-LPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAV 60
           P P PD+     P  LP S   A     +P SP     L    S         P S T  
Sbjct: 316 PVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTP 375

Query: 61  PPPPPPAMN-IPQ------------QQPPPPAAPQQPQSRRSPVSPQLQQQH 99
           P   PP++  IP             Q PP P A    Q+  S  SP LQ  H
Sbjct: 376 PMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATH 427



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 31/115 (26%), Positives = 40/115 (34%), Gaps = 19/115 (16%)

Query: 4   PSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVPPP 63
           P P  +N   P LP+++ P+  P  +   P      S P S                PP 
Sbjct: 316 PVPPPDNAATP-LPATLPPS--PPLATPLPLAPPSPSAPPS----------LQTLPSPPA 362

Query: 64  PPPAMNIPQQQPPPPAAPQQPQS------RRSPVSPQLQQQHQAAAAAFLQQRNS 112
            PP+   P    PP  AP   Q+        S  SP LQ      A + LQ   S
Sbjct: 363 TPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTS 417


>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
          Length = 1240

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 38/151 (25%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PPP P       PGL +   PA  P   P  P  C  L  P           P      P
Sbjct: 458 PPPPP------LPGLGAMAPPA--PPLPPPLPGSCEFLPPPPP---------PLPGLGCP 500

Query: 62  PPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQ-----QQHQAAAAAFLQQRNSYNHH 116
           PPPPP +      PPPP  P  P +   PV+  ++     Q      +A++      N  
Sbjct: 501 PPPPPLLPGMGWGPPPPPPPLLPCTCSPPVAGGMEEVIVAQVDHGLGSAWVPSHRRVNPP 560

Query: 117 QPLLKQSPWSNHQSSGWGTGSMSWGAMHGRD 147
              +K+  W    S+     +  W ++   D
Sbjct: 561 TLRMKKLNWQKLPSNVAREHNSMWASLSSPD 591



 Score = 33.1 bits (74), Expect = 0.73
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 56  SATAVPPPPPPAMNIPQQQPPPPAAP 81
           ++T  PPPPPP +     +PPPP  P
Sbjct: 418 ASTPPPPPPPPLLPGSSAEPPPPPPP 443



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 57  ATAVPPPPPPAM--NIPQQQPPPPAAPQQPQ--SRRSPVSP 93
           A+  PPPPPP +      + PPPP  P  P   ++  P +P
Sbjct: 418 ASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAP 458



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 7/32 (21%)

Query: 54  PFSATAVPPPPPP-------AMNIPQQQPPPP 78
           P S+   PPPPPP       A  +P   PPPP
Sbjct: 431 PGSSAEPPPPPPPPPLPSVGAKALPTAPPPPP 462


>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
          Length = 1249

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 38/151 (25%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PPP P       PGL +   PA  P   P  P  C  L  P           P      P
Sbjct: 458 PPPPP------LPGLGAMAPPA--PPLPPPLPGSCEFLPPPPP---------PLPGLGCP 500

Query: 62  PPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQ-----QQHQAAAAAFLQQRNSYNHH 116
           PPPPP +      PPPP  P  P +   PV+  ++     Q      +A++      N  
Sbjct: 501 PPPPPLLPGMGWGPPPPPPPLLPCTCSPPVAGGMEEVIVAQVDHGLGSAWVPSHRRVNPP 560

Query: 117 QPLLKQSPWSNHQSSGWGTGSMSWGAMHGRD 147
              +K+  W    S+     +  W ++   D
Sbjct: 561 TLRMKKLNWQKLPSNVAREHNSMWASLSSPD 591



 Score = 33.1 bits (74), Expect = 0.73
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 56  SATAVPPPPPPAMNIPQQQPPPPAAP 81
           ++T  PPPPPP +     +PPPP  P
Sbjct: 418 ASTPPPPPPPPLLPGSSAEPPPPPPP 443



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 57  ATAVPPPPPPAM--NIPQQQPPPPAAPQQPQ--SRRSPVSP 93
           A+  PPPPPP +      + PPPP  P  P   ++  P +P
Sbjct: 418 ASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAP 458



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 7/32 (21%)

Query: 54  PFSATAVPPPPPP-------AMNIPQQQPPPP 78
           P S+   PPPPPP       A  +P   PPPP
Sbjct: 431 PGSSAEPPPPPPPPPLPSVGAKALPTAPPPPP 462


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 35/103 (33%), Positives = 44/103 (42%), Gaps = 23/103 (22%)

Query: 14  PGLPSSMNPAFFPSFSPVS--PHGCTGLSVPTSGGG-------GGGFGGPFSATAV---- 60
           PGLP     A  P   P +  P+G    + P +          G G GGP SA A     
Sbjct: 15  PGLPPPAATAAAPGAPPAARAPYGLADYAAPPAAAANPYLWLNGPGVGGPPSAAAAAAAA 74

Query: 61  -----PPPPPP-AMNIPQQQPPPPA----APQQPQSRRSPVSP 93
                PPPPPP A   P  QPPP A      Q+P ++ +P +P
Sbjct: 75  YLGAPPPPPPPGAAAGPFLQPPPAAGTFGCSQRPFAQPAPAAP 117


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 53  GPFSATAVPPPPPPAMNIPQQQPPPPA-APQQPQSRRSPVSPQLQQQHQ 100
           GP  +   PP PPP  +  QQQPPP    PQQP   + P  PQ  QQ Q
Sbjct: 50  GPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQ 98



 Score = 38.5 bits (88), Expect = 0.017
 Identities = 29/98 (29%), Positives = 36/98 (36%), Gaps = 18/98 (18%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGP------- 54
           PPP  DS     P +     PA     +P +       + PTSG   G   GP       
Sbjct: 100 PPPPQDSSK---PVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPA 156

Query: 55  --FSATAVPPPPPPAMNIPQQ------QPPPPAAPQQP 84
              +    PPP PP+  +P         PPPPAA   P
Sbjct: 157 VTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGP 194



 Score = 33.5 bits (75), Expect = 0.56
 Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 10/92 (10%)

Query: 3   PPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVPP 62
           PP+  +  G  PG   +  PA   +     P       VPT+    GG          PP
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGG----------PP 185

Query: 63  PPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQ 94
           PPP A+  P   P     P  P+  + P  P+
Sbjct: 186 PPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPK 217



 Score = 33.5 bits (75), Expect = 0.56
 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 8/100 (8%)

Query: 2   PPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVP 61
           PPP+P S      G+P++   A  P   P +  G  G       G GG  GG        
Sbjct: 165 PPPTPPSS-----GVPTTPPQAGGPPPPPAAVPG-PGPGPKQGPGPGGPKGGKMPG-GPK 217

Query: 62  PPPPPAMNIPQQQPPPP-AAPQQPQSRRSPVSPQLQQQHQ 100
           P   P ++ P   P PP     +P+  R    P  QQ HQ
Sbjct: 218 PGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQ 257



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 10/69 (14%)

Query: 324 GERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQ 383
           GE+      ++FVG LP DI EDE    F ++G          E    F  KG  F   +
Sbjct: 289 GEKTYTQRCRLFVGNLPADITEDEFKRLFAKYG----------EPGEVFINKGKGFGFIK 338

Query: 384 EESSVQALI 392
            ES   A I
Sbjct: 339 LESRALAEI 347


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 43/167 (25%), Positives = 55/167 (32%), Gaps = 10/167 (5%)

Query: 15  GLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVPPPPPPAMNIPQQQ 74
           G  SS      P+ SP SPH    LS    G      G P  +      P    +IP  Q
Sbjct: 646 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ 705

Query: 75  PPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLLKQSPWSNHQSSGWG 134
            PP     Q +S   P   Q     +    A  Q+      + P       S H S G  
Sbjct: 706 MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPG-- 763

Query: 135 TGSMSWGAMHGRDHRRTGNMGIPGTMNQISPLKKPFSGNVIAPPKFT 181
            G M  G    +    +G  G    M+Q  P      GN   PP ++
Sbjct: 764 -GQMHAGISSFQQSNSSGTYG--PQMSQYGP-----QGNYSRPPAYS 802



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 36/168 (21%), Positives = 53/168 (31%), Gaps = 24/168 (14%)

Query: 35  GCTGLSVPTSGGGGGGF-----------GGPFSATAVPPPPPPAM-----NIPQQQPP-- 76
           G   LS   +G   GGF           G   +   +   P P M     + P+   P  
Sbjct: 328 GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSA 387

Query: 77  PPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNS-YNHHQPLLKQSPWSNHQSSGWGT 135
           PP  P QPQS+ +        Q  AA     +   + Y    P    +   +H +   GT
Sbjct: 388 PPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT 447

Query: 136 GSMSWGAMHGRD-----HRRTGNMGIPGTMNQISPLKKPFSGNVIAPP 178
              + G   G        +R    G+    +       P+ G    PP
Sbjct: 448 PGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPP 495


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
           [Homo sapiens]
          Length = 2231

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 43/167 (25%), Positives = 55/167 (32%), Gaps = 10/167 (5%)

Query: 15  GLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGGPFSATAVPPPPPPAMNIPQQQ 74
           G  SS      P+ SP SPH    LS    G      G P  +      P    +IP  Q
Sbjct: 633 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ 692

Query: 75  PPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLLKQSPWSNHQSSGWG 134
            PP     Q +S   P   Q     +    A  Q+      + P       S H S G  
Sbjct: 693 MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPG-- 750

Query: 135 TGSMSWGAMHGRDHRRTGNMGIPGTMNQISPLKKPFSGNVIAPPKFT 181
            G M  G    +    +G  G    M+Q  P      GN   PP ++
Sbjct: 751 -GQMHAGISSFQQSNSSGTYG--PQMSQYGP-----QGNYSRPPAYS 789



 Score = 30.4 bits (67), Expect = 4.8
 Identities = 32/119 (26%), Positives = 37/119 (31%), Gaps = 25/119 (21%)

Query: 32  SPHGCTGLSVPTSGGGGGGFGG---PFSATAVPPPPPPAMNIPQQQPPPPAAP------- 81
           +PH     S P  GG  G  G    P       P     M  PQQQ PP           
Sbjct: 476 NPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYC 535

Query: 82  ---QQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLLKQSPWSNHQSSGWGTGS 137
              QQP   + P  P L  Q Q            Y   Q   +  P  +    G+GT S
Sbjct: 536 QQGQQPYYSQQPQPPHLPPQAQ------------YLPSQSQQRYQPQQDMSQEGYGTRS 582



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 36/168 (21%), Positives = 53/168 (31%), Gaps = 24/168 (14%)

Query: 35  GCTGLSVPTSGGGGGGF-----------GGPFSATAVPPPPPPAM-----NIPQQQPP-- 76
           G   LS   +G   GGF           G   +   +   P P M     + P+   P  
Sbjct: 328 GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSA 387

Query: 77  PPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNS-YNHHQPLLKQSPWSNHQSSGWGT 135
           PP  P QPQS+ +        Q  AA     +   + Y    P    +   +H +   GT
Sbjct: 388 PPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT 447

Query: 136 GSMSWGAMHGRD-----HRRTGNMGIPGTMNQISPLKKPFSGNVIAPP 178
              + G   G        +R    G+    +       P+ G    PP
Sbjct: 448 PGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPP 495


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,899,784
Number of Sequences: 37866
Number of extensions: 1677331
Number of successful extensions: 26199
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 790
Number of HSP's that attempted gapping in prelim test: 14088
Number of HSP's gapped (non-prelim): 7837
length of query: 589
length of database: 18,247,518
effective HSP length: 108
effective length of query: 481
effective length of database: 14,157,990
effective search space: 6809993190
effective search space used: 6809993190
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.