Guide to the Human Genome
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Name: UBE2M Sequence: fasta or formatted (183aa) NCBI GI: 4507791
Description:

ubiquitin-conjugating enzyme E2M

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3          6           2
 C cysteine            2.7          5           1
 D aspartate           5.5         10           2
 E glutamate           7.7         14           3
 F phenylalanine       5.5         10           1
 G glycine             6.6         12           2
 H histidine           1.1          2           1
 I isoleucine          6.0         11           2
 K lysine              9.8         18           2
 L leucine            10.4         19           2
 M methionine          1.6          3           1
 N asparagine          6.6         12           2
 P proline             6.0         11           2
 Q glutamine           4.9          9           2
 R arginine            3.8          7           2
 S serine              6.6         12           2
 T threonine           2.7          5           1
 V valine              4.9          9           1
 W tryptophan          0.5          1           1
 Y tyrosine            3.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2M 
UBE2F                 0.261   NEDD8-conjugating enzyme 
UBE2D2                0.195   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D1                0.195   ubiquitin-conjugating enzyme E2D 1 
UBE2D4                0.193   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D3                0.190   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.190   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.190   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.190   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.190   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.190   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.190   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.190   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.184   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2A                 0.181   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2B                 0.181   ubiquitin-conjugating enzyme E2B 
UBE2D2                0.178   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2C                 0.176   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2E2                0.176   ubiquitin-conjugating enzyme E2E 2 
UBE2E3                0.173   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.173   ubiquitin-conjugating enzyme E2E 3 
UBE2E1                0.170   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2L3                0.167   ubiquitin-conjugating enzyme E2L 3 isoform 1 
UBE2C                 0.161   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.161   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2N                 0.161   ubiquitin-conjugating enzyme E2N 
UBE2C                 0.159   ubiquitin-conjugating enzyme E2C isoform 3 
UBE2I                 0.156   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.156   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.156   ubiquitin-conjugating enzyme E2I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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