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Search of human proteins with 12408647
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12408647 X-ray repair cross complementing protein 4 isoform
2 [Homo sapiens]
(336 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12408647 X-ray repair cross complementing protein 4 isoform 2... 664 0.0
gi|12408649 X-ray repair cross complementing protein 4 isoform 1... 654 0.0
gi|4507945 X-ray repair cross complementing protein 4 isoform 1 ... 654 0.0
gi|71061468 centromere protein E [Homo sapiens] 45 9e-05
gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo sa... 42 0.001
gi|197313732 pleckstrin homology-like domain, family B, member 2... 39 0.007
gi|197313730 pleckstrin homology-like domain, family B, member 2... 39 0.007
gi|197313728 pleckstrin homology-like domain, family B, member 2... 39 0.007
gi|21955172 pleckstrin homology-like domain, family B, member 2 ... 39 0.007
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 38 0.011
gi|148746195 trichohyalin [Homo sapiens] 38 0.011
gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] 38 0.015
gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] 38 0.015
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 38 0.015
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 38 0.015
gi|118498362 kinectin 1 isoform b [Homo sapiens] 37 0.019
gi|118498356 kinectin 1 isoform a [Homo sapiens] 37 0.019
gi|118498368 kinectin 1 isoform c [Homo sapiens] 37 0.019
gi|33620775 kinectin 1 isoform a [Homo sapiens] 37 0.019
gi|151101151 coiled-coil domain containing 2 isoform b [Homo sap... 37 0.025
gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap... 37 0.025
gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap... 37 0.025
gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap... 37 0.025
gi|217330601 SP140 nuclear body protein isoform 1 [Homo sapiens] 37 0.033
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.033
gi|55770834 centromere protein F [Homo sapiens] 37 0.033
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 36 0.056
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 36 0.056
gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member ... 36 0.056
gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member ... 36 0.056
>gi|12408647 X-ray repair cross complementing protein 4 isoform 2
[Homo sapiens]
Length = 336
Score = 664 bits (1713), Expect = 0.0
Identities = 336/336 (100%), Positives = 336/336 (100%)
Query: 1 MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMA 60
MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMA
Sbjct: 1 MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMA 60
Query: 61 MEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPA 120
MEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPA
Sbjct: 61 MEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPA 120
Query: 121 EVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF 180
EVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF
Sbjct: 121 EVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF 180
Query: 181 ILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQ 240
ILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQ
Sbjct: 181 ILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQ 240
Query: 241 TDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSR 300
TDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSR
Sbjct: 241 TDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSR 300
Query: 301 PDSSLPETSKKEHISAENMSLETLRNSSPEDLFDEI 336
PDSSLPETSKKEHISAENMSLETLRNSSPEDLFDEI
Sbjct: 301 PDSSLPETSKKEHISAENMSLETLRNSSPEDLFDEI 336
>gi|12408649 X-ray repair cross complementing protein 4 isoform 1
[Homo sapiens]
Length = 334
Score = 654 bits (1687), Expect = 0.0
Identities = 333/336 (99%), Positives = 334/336 (99%), Gaps = 2/336 (0%)
Query: 1 MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMA 60
MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMA
Sbjct: 1 MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMA 60
Query: 61 MEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPA 120
MEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPA
Sbjct: 61 MEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPA 120
Query: 121 EVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF 180
EVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF
Sbjct: 121 EVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF 180
Query: 181 ILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQ 240
ILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQ
Sbjct: 181 ILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQ 240
Query: 241 TDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSR 300
TDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKE +
Sbjct: 241 TDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKE--K 298
Query: 301 PDSSLPETSKKEHISAENMSLETLRNSSPEDLFDEI 336
PDSSLPETSKKEHISAENMSLETLRNSSPEDLFDEI
Sbjct: 299 PDSSLPETSKKEHISAENMSLETLRNSSPEDLFDEI 334
>gi|4507945 X-ray repair cross complementing protein 4 isoform 1
[Homo sapiens]
Length = 334
Score = 654 bits (1687), Expect = 0.0
Identities = 333/336 (99%), Positives = 334/336 (99%), Gaps = 2/336 (0%)
Query: 1 MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMA 60
MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMA
Sbjct: 1 MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMA 60
Query: 61 MEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPA 120
MEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPA
Sbjct: 61 MEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPA 120
Query: 121 EVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF 180
EVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF
Sbjct: 121 EVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF 180
Query: 181 ILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQ 240
ILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQ
Sbjct: 181 ILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQ 240
Query: 241 TDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSR 300
TDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKE +
Sbjct: 241 TDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKE--K 298
Query: 301 PDSSLPETSKKEHISAENMSLETLRNSSPEDLFDEI 336
PDSSLPETSKKEHISAENMSLETLRNSSPEDLFDEI
Sbjct: 299 PDSSLPETSKKEHISAENMSLETLRNSSPEDLFDEI 334
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 45.1 bits (105), Expect = 9e-05
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 44/206 (21%)
Query: 133 TIAENQAKNEHLQKENE--RLLRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTK 190
T+ + NE ++++ + L+++ N++Q E ++ KE L+TDL + + + E + +
Sbjct: 1028 TLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTI-ENQEE 1086
Query: 191 IRSLHNKLLN----AAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGL 246
+R L ++L AQE+ IK+EGE + T DR +E E+S+
Sbjct: 1087 LRLLGDELKKQQEIVAQEKNHAIKKEGELS----RTCDRLAEVEEKLKEKSQ-------- 1134
Query: 247 ASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSRPDSSLP 306
+ +++ Q+ L + +M+ + ++ E EN + +
Sbjct: 1135 ------------------------QLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNK 1170
Query: 307 ETSKKEHISAENMSLETLRNSSPEDL 332
E + EH+ E + L N + E++
Sbjct: 1171 ELT-LEHMETERLELAQKLNENYEEV 1195
>gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo
sapiens]
Length = 1826
Score = 41.6 bits (96), Expect = 0.001
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Query: 131 LDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTK 190
L+TI +N +K+++ +E+ L D N + K + E+ T + + + + T+
Sbjct: 1569 LETIRKNISKHKYQSRES--FLDDVNLILANSVK-YNGPESQYTKTAQEIVNICYQTITE 1625
Query: 191 IRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPV----YDESTDEESENQTDLSGL 246
+L EKDI E A+ DP+ Y + + T LS
Sbjct: 1626 YDEHLTQL-------EKDICTAKEAALEEAELESLDPMTPGPYTSQPPDMYDTNTSLSTS 1678
Query: 247 ASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSRPDSSLP 306
A+V +D+S +S LD++ P ++ Q Q LG E E E+E+ +P P
Sbjct: 1679 RDASVFQDESNLSVLDISTATPEKQMCQG-QGRLGEEDSDVDVEGYDDEEEDGKPKPPAP 1737
Query: 307 E 307
E
Sbjct: 1738 E 1738
>gi|197313732 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 38.9 bits (89), Expect = 0.007
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 231 ESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQE 290
E + + E+ SG A+ + S ISS+ D RRQR +R E +M E
Sbjct: 389 EFDEADLESLRQASGTPQPALRERKSSISSISGRDDLMDYHRRQREERL--REQEMERLE 446
Query: 291 NQLQEK------ENSRPDSSLPETSKKEHISAENMSLETLRNSSPEDLFDE 335
Q E E ++PDS L + E + N LE L+ S E +F+E
Sbjct: 447 RQRLETILSLCAEYTKPDSRLSTGTTVEDVQKINKELEKLQLSDEESVFEE 497
>gi|197313730 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 38.9 bits (89), Expect = 0.007
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 231 ESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQE 290
E + + E+ SG A+ + S ISS+ D RRQR +R E +M E
Sbjct: 389 EFDEADLESLRQASGTPQPALRERKSSISSISGRDDLMDYHRRQREERL--REQEMERLE 446
Query: 291 NQLQEK------ENSRPDSSLPETSKKEHISAENMSLETLRNSSPEDLFDE 335
Q E E ++PDS L + E + N LE L+ S E +F+E
Sbjct: 447 RQRLETILSLCAEYTKPDSRLSTGTTVEDVQKINKELEKLQLSDEESVFEE 497
>gi|197313728 pleckstrin homology-like domain, family B, member 2
isoform b [Homo sapiens]
Length = 1237
Score = 38.9 bits (89), Expect = 0.007
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 231 ESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQE 290
E + + E+ SG A+ + S ISS+ D RRQR +R E +M E
Sbjct: 416 EFDEADLESLRQASGTPQPALRERKSSISSISGRDDLMDYHRRQREERL--REQEMERLE 473
Query: 291 NQLQEK------ENSRPDSSLPETSKKEHISAENMSLETLRNSSPEDLFDE 335
Q E E ++PDS L + E + N LE L+ S E +F+E
Sbjct: 474 RQRLETILSLCAEYTKPDSRLSTGTTVEDVQKINKELEKLQLSDEESVFEE 524
>gi|21955172 pleckstrin homology-like domain, family B, member 2
isoform c [Homo sapiens]
Length = 1210
Score = 38.9 bits (89), Expect = 0.007
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 231 ESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQE 290
E + + E+ SG A+ + S ISS+ D RRQR +R E +M E
Sbjct: 389 EFDEADLESLRQASGTPQPALRERKSSISSISGRDDLMDYHRRQREERL--REQEMERLE 446
Query: 291 NQLQEK------ENSRPDSSLPETSKKEHISAENMSLETLRNSSPEDLFDE 335
Q E E ++PDS L + E + N LE L+ S E +F+E
Sbjct: 447 RQRLETILSLCAEYTKPDSRLSTGTTVEDVQKINKELEKLQLSDEESVFEE 497
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 38.1 bits (87), Expect = 0.011
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 24/149 (16%)
Query: 162 FEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEM 221
+E V +L D Y V ++ K+++ +L +L +E E++ ++E E
Sbjct: 262 WETVVGDDFSLYYDSYSVDERVDSDSKSEVEALTEQLSEEEEEEEEEEEEEEE------- 314
Query: 222 TADRDPVYDESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLG 281
+ +E DEES NQ+D SG + +K D + PSRKRR+R
Sbjct: 315 ---EEEEEEEEEDEESGNQSDRSGSSGRRKAKKK---WRKDSPWVKPSRKRRKR------ 362
Query: 282 TEPKMAPQ----ENQLQEKENSRPDSSLP 306
EP A + N E R LP
Sbjct: 363 -EPPRAKEPRGVSNDTSSLETERGFEELP 390
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 38.1 bits (87), Expect = 0.011
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 24/180 (13%)
Query: 140 KNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLL 199
K E LQ+E E+LLR+ + + R E+ +E E +L + +L E++ K R + L
Sbjct: 1082 KEEELQQEEEQLLREEPEKRRRQERERQCRE--EEELQQEEEQLLREEREKRR---RQEL 1136
Query: 200 NAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSIIS 259
E++++QE E + E R + EE E Q + L
Sbjct: 1137 ERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLR----------- 1185
Query: 260 SLDVTDIAPSRKRRQRMQRNLGTEPKMAPQE-NQLQEKENSRPDSSLPETSKKEHISAEN 318
KRRQ +R E ++ Q+ Q E+ R D +KE+ +N
Sbjct: 1186 -------EEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSDLKWQWEPEKENAVRDN 1238
Score = 33.1 bits (74), Expect = 0.36
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 27/193 (13%)
Query: 140 KNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLL 199
+ E LQ+E E+LLR+ + + R E+ + + L ++ +L E+ K R
Sbjct: 932 EEEQLQQEEEQLLREEREKRRRQER--ERQYRKDKKLQQKEEQLLGEEPEKRR------- 982
Query: 200 NAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSIIS 259
QEREK ++E E+ + + + E ++ + + + +++ +
Sbjct: 983 --RQEREKKYREE------EELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLL 1034
Query: 260 SLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQL--QEKENSRPDSSLPETSKKEHISAE 317
+ ++R Q +R E ++ +E QL +E+E R + K+E + E
Sbjct: 1035 REE-----REKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQE 1089
Query: 318 NMSLETLRNSSPE 330
E L PE
Sbjct: 1090 E---EQLLREEPE 1099
>gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]
Length = 373
Score = 37.7 bits (86), Expect = 0.015
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 193 SLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLS-GLASAAV 251
S +L++ Q + + ++ I S T D D DE D+E EN D + GL+ V
Sbjct: 193 SFQGELMDGDQTSRSGVPAQVQSEITSANTEDDDDDDDEDDDDEEENAEDRNPGLSKERV 252
Query: 252 SKDDSIISSLDVTDIAPSRKRRQRMQRN 279
S +SSLD + R+ ++ + RN
Sbjct: 253 RASLSDLSSLDDVEGMSVRQLKEILARN 280
>gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]
Length = 372
Score = 37.7 bits (86), Expect = 0.015
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 193 SLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLS-GLASAAV 251
S +L++ Q + + ++ I S T D D DE D+E EN D + GL+ V
Sbjct: 192 SFQGELMDGDQTSRSGVPAQVQSEITSANTEDDDDDDDEDDDDEEENAEDRNPGLSKERV 251
Query: 252 SKDDSIISSLDVTDIAPSRKRRQRMQRN 279
S +SSLD + R+ ++ + RN
Sbjct: 252 RASLSDLSSLDDVEGMSVRQLKEILARN 279
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 37.7 bits (86), Expect = 0.015
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 162 FEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEM 221
+E V +L D Y V ++ K+++ +L +L +E E++ ++E E
Sbjct: 262 WETVVGDDFSLYYDSYSVDERVDSDSKSEVEALTEQLSEEEEEEEEEEEEEEE------- 314
Query: 222 TADRDPVYDESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQR 275
+ +E DEES NQ+D SG + +K D + PSRKRR+R
Sbjct: 315 ---EEEEEEEEEDEESGNQSDRSGSSGRRKAKKK---WRKDSPWVKPSRKRRKR 362
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 37.7 bits (86), Expect = 0.015
Identities = 42/218 (19%), Positives = 89/218 (40%), Gaps = 26/218 (11%)
Query: 113 LEKVENPAEVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEAL 172
LE+VE A + + C D +N ++ + N +L ++Q ++ A
Sbjct: 1359 LEEVERLATELEKWKEKCNDLETKNNQRSNKEHENNTDVLGKLTNLQDELQESEQKYNAD 1418
Query: 173 ETDLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDES 232
+ ++++ + K + ++ A++RE+ KQ+ E I + ++D +
Sbjct: 1419 RKKWLEEKMMLITQAKEAENIRNKEMKKYAEDRERFFKQQNEMEILTAQLTEKDSDLQKW 1478
Query: 233 TDEESE----NQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAP 288
+E + + L L S+ V KD+ I ++++R + K+
Sbjct: 1479 REERDQLVAALEIQLKALISSNVQKDNEI----------------EQLKRIISETSKI-- 1520
Query: 289 QENQLQEKENSRPDSSLPETSKKEHISAENMSLETLRN 326
E Q+ + + R S+ P+ + E +S S E RN
Sbjct: 1521 -ETQIMDIKPKRISSADPDKLQTEPLST---SFEISRN 1554
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 37.4 bits (85), Expect = 0.019
Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 153 RDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQE 212
R W +VQ K + EA + DL +F+ K+ +++SLH+KL + KQ+
Sbjct: 495 RRWEEVQSYIRKRTAEHEAAQQDLQSKFV----AKENEVQSLHSKLTDTLVS-----KQQ 545
Query: 213 GETAICSEMTADRDPV-YDESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRK 271
E + M +++ V +ES + ++ + + A + + S I++ +
Sbjct: 546 LEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 605
Query: 272 RR---QRMQRNLGTEPKMAPQENQLQEKENSRPD 302
+ ++ ++ TE +A + ++L KE D
Sbjct: 606 HKVIAEKDKQIKQTEDSLASERDRLTSKEEELKD 639
Score = 29.3 bits (64), Expect = 5.2
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 138 QAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNK 197
+A+ HL++EN L ++ + E SA+ Y R + L EK K++ +
Sbjct: 416 EAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQ 475
Query: 198 LLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSI 257
NA Q + +K + + A + + T E Q DL A ++ S+
Sbjct: 476 KKNAEQAATQ-LKVQLQEA--ERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Query: 258 ISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQ 294
S L T + ++ QR+ + + +E K +E LQ
Sbjct: 533 HSKLTDT-LVSKQQLEQRLMQLMESEQKRVNKEESLQ 568
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 37.4 bits (85), Expect = 0.019
Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 153 RDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQE 212
R W +VQ K + EA + DL +F+ K+ +++SLH+KL + KQ+
Sbjct: 495 RRWEEVQSYIRKRTAEHEAAQQDLQSKFV----AKENEVQSLHSKLTDTLVS-----KQQ 545
Query: 213 GETAICSEMTADRDPV-YDESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRK 271
E + M +++ V +ES + ++ + + A + + S I++ +
Sbjct: 546 LEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 605
Query: 272 RR---QRMQRNLGTEPKMAPQENQLQEKENSRPD 302
+ ++ ++ TE +A + ++L KE D
Sbjct: 606 HKVIAEKDKQIKQTEDSLASERDRLTSKEEELKD 639
Score = 29.3 bits (64), Expect = 5.2
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 138 QAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNK 197
+A+ HL++EN L ++ + E SA+ Y R + L EK K++ +
Sbjct: 416 EAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQ 475
Query: 198 LLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSI 257
NA Q + +K + + A + + T E Q DL A ++ S+
Sbjct: 476 KKNAEQAATQ-LKVQLQEA--ERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Query: 258 ISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQ 294
S L T + ++ QR+ + + +E K +E LQ
Sbjct: 533 HSKLTDT-LVSKQQLEQRLMQLMESEQKRVNKEESLQ 568
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 37.4 bits (85), Expect = 0.019
Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 153 RDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQE 212
R W +VQ K + EA + DL +F+ K+ +++SLH+KL + KQ+
Sbjct: 495 RRWEEVQSYIRKRTAEHEAAQQDLQSKFV----AKENEVQSLHSKLTDTLVS-----KQQ 545
Query: 213 GETAICSEMTADRDPV-YDESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRK 271
E + M +++ V +ES + ++ + + A + + S I++ +
Sbjct: 546 LEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 605
Query: 272 RR---QRMQRNLGTEPKMAPQENQLQEKENSRPD 302
+ ++ ++ TE +A + ++L KE D
Sbjct: 606 HKVIAEKDKQIKQTEDSLASERDRLTSKEEELKD 639
Score = 29.3 bits (64), Expect = 5.2
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 138 QAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNK 197
+A+ HL++EN L ++ + E SA+ Y R + L EK K++ +
Sbjct: 416 EAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQ 475
Query: 198 LLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSI 257
NA Q + +K + + A + + T E Q DL A ++ S+
Sbjct: 476 KKNAEQAATQ-LKVQLQEA--ERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Query: 258 ISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQ 294
S L T + ++ QR+ + + +E K +E LQ
Sbjct: 533 HSKLTDT-LVSKQQLEQRLMQLMESEQKRVNKEESLQ 568
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 37.4 bits (85), Expect = 0.019
Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 153 RDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQE 212
R W +VQ K + EA + DL +F+ K+ +++SLH+KL + KQ+
Sbjct: 495 RRWEEVQSYIRKRTAEHEAAQQDLQSKFV----AKENEVQSLHSKLTDTLVS-----KQQ 545
Query: 213 GETAICSEMTADRDPV-YDESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRK 271
E + M +++ V +ES + ++ + + A + + S I++ +
Sbjct: 546 LEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 605
Query: 272 RR---QRMQRNLGTEPKMAPQENQLQEKENSRPD 302
+ ++ ++ TE +A + ++L KE D
Sbjct: 606 HKVIAEKDKQIKQTEDSLASERDRLTSKEEELKD 639
Score = 29.3 bits (64), Expect = 5.2
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 138 QAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNK 197
+A+ HL++EN L ++ + E SA+ Y R + L EK K++ +
Sbjct: 416 EAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQ 475
Query: 198 LLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSI 257
NA Q + +K + + A + + T E Q DL A ++ S+
Sbjct: 476 KKNAEQAATQ-LKVQLQEA--ERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Query: 258 ISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQ 294
S L T + ++ QR+ + + +E K +E LQ
Sbjct: 533 HSKLTDT-LVSKQQLEQRLMQLMESEQKRVNKEESLQ 568
>gi|151101151 coiled-coil domain containing 2 isoform b [Homo
sapiens]
Length = 372
Score = 37.0 bits (84), Expect = 0.025
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Query: 96 FFEKNLKDVSFRLGSFNLEKVENPAEVIRELICYCLDTIAENQAKNEHLQKENERLLRDW 155
F E+ K+ R +E+ + + I + + + ENQ K ++ NE+LL++
Sbjct: 191 FTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSF------ENQVKYLEMKTTNEKLLQEL 244
Query: 156 NDVQGRFEKCVSAKEALETDL----YKRFILVLNEKKTKIRSLHNKLL-------NAAQE 204
+ +Q + + KE+LE ++ K+ ++L+EK ++ S ++++ + +E
Sbjct: 245 DTLQQQLDSQNMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEE 304
Query: 205 REKDIKQ 211
REK +KQ
Sbjct: 305 REKLLKQ 311
>gi|151101140 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 37.0 bits (84), Expect = 0.025
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Query: 96 FFEKNLKDVSFRLGSFNLEKVENPAEVIRELICYCLDTIAENQAKNEHLQKENERLLRDW 155
F E+ K+ R +E+ + + I + + + ENQ K ++ NE+LL++
Sbjct: 191 FTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSF------ENQVKYLEMKTTNEKLLQEL 244
Query: 156 NDVQGRFEKCVSAKEALETDL----YKRFILVLNEKKTKIRSLHNKLL-------NAAQE 204
+ +Q + + KE+LE ++ K+ ++L+EK ++ S ++++ + +E
Sbjct: 245 DTLQQQLDSQNMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEE 304
Query: 205 REKDIKQ 211
REK +KQ
Sbjct: 305 REKLLKQ 311
>gi|151105223 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 37.0 bits (84), Expect = 0.025
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Query: 96 FFEKNLKDVSFRLGSFNLEKVENPAEVIRELICYCLDTIAENQAKNEHLQKENERLLRDW 155
F E+ K+ R +E+ + + I + + + ENQ K ++ NE+LL++
Sbjct: 191 FTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSF------ENQVKYLEMKTTNEKLLQEL 244
Query: 156 NDVQGRFEKCVSAKEALETDL----YKRFILVLNEKKTKIRSLHNKLL-------NAAQE 204
+ +Q + + KE+LE ++ K+ ++L+EK ++ S ++++ + +E
Sbjct: 245 DTLQQQLDSQNMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEE 304
Query: 205 REKDIKQ 211
REK +KQ
Sbjct: 305 REKLLKQ 311
>gi|151105229 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 37.0 bits (84), Expect = 0.025
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Query: 96 FFEKNLKDVSFRLGSFNLEKVENPAEVIRELICYCLDTIAENQAKNEHLQKENERLLRDW 155
F E+ K+ R +E+ + + I + + + ENQ K ++ NE+LL++
Sbjct: 191 FTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSF------ENQVKYLEMKTTNEKLLQEL 244
Query: 156 NDVQGRFEKCVSAKEALETDL----YKRFILVLNEKKTKIRSLHNKLL-------NAAQE 204
+ +Q + + KE+LE ++ K+ ++L+EK ++ S ++++ + +E
Sbjct: 245 DTLQQQLDSQNMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEE 304
Query: 205 REKDIKQ 211
REK +KQ
Sbjct: 305 REKLLKQ 311
>gi|217330601 SP140 nuclear body protein isoform 1 [Homo sapiens]
Length = 867
Score = 36.6 bits (83), Expect = 0.033
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 186 EKKTKIRSLHNKLLNAAQEREKDIKQEGETA-ICSEMTADRDPVYDESTDEESENQT--- 241
E++ SL + +++ + +EGE+ + S + D P ++S E +
Sbjct: 400 ERQEASSSLARRGSVSSELENHPMNEEGESEELASSLLYDNVPGAEQSAYENEKCSCVMC 459
Query: 242 ---DLSGLASAAVSKDDSIISSLDVTDIAPSR-----KRRQRMQRNLG-TEPKMAPQENQ 292
++ G A D + ++D DIA + KR++R +R G + +M QEN
Sbjct: 460 FSEEVPGSPEARTESDQAC-GTMDTVDIANNSTLGKPKRKRRKKRGHGWSRMRMRRQENS 518
Query: 293 LQEKENSRPDSSLPETSKKEHISAENMS 320
Q+ +NS+ D + + KK +++ +++S
Sbjct: 519 -QQNDNSKADGQVVSSEKKANVNLKDLS 545
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 36.6 bits (83), Expect = 0.033
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 127 ICYCLDTIAENQAKNEHLQK--ENERLLRDWNDVQGRFEKCVSAKEAL-ETDLYKRFILV 183
+C D + + + K E +K E ++ R+ + + R E+ +EA E + R +
Sbjct: 159 VCLFRDRLEQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHR--TM 216
Query: 184 LNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDL 243
+ K+++ H RE+ +G + E +RD + D +SE +T
Sbjct: 217 REDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTS- 275
Query: 244 SGLASAAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSRPDS 303
S +S+A S S + + + G+ + + +E + +E+E S
Sbjct: 276 SAESSSAESGSGS-----------EEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS 324
Query: 304 SLPETSKK--EHISAENMSLETLRNSS------PEDLFD 334
+ E S++ E +S E MS + R + PE FD
Sbjct: 325 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFD 363
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 36.6 bits (83), Expect = 0.033
Identities = 40/210 (19%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Query: 115 KVENPAEVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALET 174
K+E + +R L + +E + LQKE ER + + + FE + KE +
Sbjct: 2372 KIEGMTQSLRGLELDVVTIRSEKENLTNELQKEQER-ISELEIINSSFENILQEKEQEKV 2430
Query: 175 DLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTD 234
+ ++ + +T+++ L+ ++ ++E +E + E + D
Sbjct: 2431 QMKEKSSTAMEMLQTQLKELNERVAALHNDQEACKAKEQNLSSQVECLELEKAQLLQGLD 2490
Query: 235 EESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQ-RMQRNLGTEPKMAPQENQL 293
E N L + + + + L+ D SR + Q + Q L ++ E+QL
Sbjct: 2491 EAKNNYIVLQSSVNGLIQEVEDGKQKLEKKDEEISRLKNQIQDQEQLVSKLSQVEGEHQL 2550
Query: 294 QEKENSRPDSSLPETSKK-EHISAENMSLE 322
+++N + E +K + + ++N SL+
Sbjct: 2551 WKEQNLELRNLTVELEQKIQVLQSKNASLQ 2580
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 35.8 bits (81), Expect = 0.056
Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 136 ENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEAL-ETDLYKRFILVLNEKKTKIRSL 194
E + + E +E ++ R+ + + R E+ +EA E + R + + K+++
Sbjct: 160 ERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHR--TMREDYSDKVKAS 217
Query: 195 HNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKD 254
H RE+ +G + E +RD + D +SE +T S +S+A S
Sbjct: 218 HWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTS-SAESSSAESGS 276
Query: 255 DSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSRPDSSLPETSKK--E 312
S + + + G+ + + +E + +E+E S+ E S++ E
Sbjct: 277 GS-----------EEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAE 325
Query: 313 HISAENMSLETLRNSS------PEDLFD 334
+S E MS + R + PE FD
Sbjct: 326 EVSEEEMSEDEERENENHLLVVPESRFD 353
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 35.8 bits (81), Expect = 0.056
Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 136 ENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEAL-ETDLYKRFILVLNEKKTKIRSL 194
E + + E +E ++ R+ + + R E+ +EA E + R + + K+++
Sbjct: 170 ERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHR--TMREDYSDKVKAS 227
Query: 195 HNKLLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKD 254
H RE+ +G + E +RD + D +SE +T S +S+A S
Sbjct: 228 HWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTS-SAESSSAESGS 286
Query: 255 DSIISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSRPDSSLPETSKK--E 312
S + + + G+ + + +E + +E+E S+ E S++ E
Sbjct: 287 GS-----------EEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAE 335
Query: 313 HISAENMSLETLRNSS------PEDLFD 334
+S E MS + R + PE FD
Sbjct: 336 EVSEEEMSEDEERENENHLLVVPESRFD 363
>gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member A5
[Homo sapiens]
Length = 823
Score = 35.8 bits (81), Expect = 0.056
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 25/189 (13%)
Query: 140 KNEHLQKENERL--LRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNK 197
KN++L+KEN+ L ++ + EKC+ E + T + LN+ K + L+++
Sbjct: 532 KNDNLEKENKYLKDIKIAKETNAALEKCIKLNEEMITKTAFWYQQELNDLKAENTRLNSE 591
Query: 198 LLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSI 257
LL +EK+ K++ E I S + + S + ++E L+ + +S+ +
Sbjct: 592 LL-----KEKESKKKLEAEIESYQSRLAAAISKHSENVKTERNLKLALERTQDISEQVKM 646
Query: 258 ISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSRPDSSLPETSKKEHISAE 317
S DI+ + + L KM + N L++K D+ + +
Sbjct: 647 SS-----DISEIEDKNXFLTEQLS---KMQIKFNTLKDKFRKTRDT----------LRKK 688
Query: 318 NMSLETLRN 326
+++LET++N
Sbjct: 689 SLALETVQN 697
Score = 28.5 bits (62), Expect = 8.9
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 27/166 (16%)
Query: 185 NEKKTKIRSLHNKLLNAAQEREKDIKQEGE------TAICSEM---TADRDPVYDESTDE 235
NE+KT + LH K + +EK K+E E T EM TA P D E
Sbjct: 446 NEEKTNVNMLHKKNREELERKEKQYKKEVEAKQLEPTVQSLEMKPKTARNTPNQDFHNHE 505
Query: 236 ESEN--------QTDLSGLAS--AAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPK 285
E ++ +TD++ L + D+ + + DI +++ +++ + +
Sbjct: 506 EVKDLMDENCILKTDIAILRQEICTMKNDNLEKENKYLKDIKIAKETNAALEKCIKLNEE 565
Query: 286 MA-------PQENQLQEKENSRPDSS-LPETSKKEHISAENMSLET 323
M QE + EN+R +S L E K+ + AE S ++
Sbjct: 566 MITKTAFWYQQELNDLKAENTRLNSELLKEKESKKKLEAEIESYQS 611
>gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member A5
[Homo sapiens]
Length = 823
Score = 35.8 bits (81), Expect = 0.056
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 25/189 (13%)
Query: 140 KNEHLQKENERL--LRDWNDVQGRFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNK 197
KN++L+KEN+ L ++ + EKC+ E + T + LN+ K + L+++
Sbjct: 532 KNDNLEKENKYLKDIKIAKETNAALEKCIKLNEEMITKTAFWYQQELNDLKAENTRLNSE 591
Query: 198 LLNAAQEREKDIKQEGETAICSEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSI 257
LL +EK+ K++ E I S + + S + ++E L+ + +S+ +
Sbjct: 592 LL-----KEKESKKKLEAEIESYQSRLAAAISKHSENVKTERNLKLALERTQDISEQVKM 646
Query: 258 ISSLDVTDIAPSRKRRQRMQRNLGTEPKMAPQENQLQEKENSRPDSSLPETSKKEHISAE 317
S DI+ + + L KM + N L++K D+ + +
Sbjct: 647 SS-----DISEIEDKNXFLTEQLS---KMQIKFNTLKDKFRKTRDT----------LRKK 688
Query: 318 NMSLETLRN 326
+++LET++N
Sbjct: 689 SLALETVQN 697
Score = 28.5 bits (62), Expect = 8.9
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 27/166 (16%)
Query: 185 NEKKTKIRSLHNKLLNAAQEREKDIKQEGE------TAICSEM---TADRDPVYDESTDE 235
NE+KT + LH K + +EK K+E E T EM TA P D E
Sbjct: 446 NEEKTNVNMLHKKNREELERKEKQYKKEVEAKQLEPTVQSLEMKPKTARNTPNQDFHNHE 505
Query: 236 ESEN--------QTDLSGLAS--AAVSKDDSIISSLDVTDIAPSRKRRQRMQRNLGTEPK 285
E ++ +TD++ L + D+ + + DI +++ +++ + +
Sbjct: 506 EVKDLMDENCILKTDIAILRQEICTMKNDNLEKENKYLKDIKIAKETNAALEKCIKLNEE 565
Query: 286 MA-------PQENQLQEKENSRPDSS-LPETSKKEHISAENMSLET 323
M QE + EN+R +S L E K+ + AE S ++
Sbjct: 566 MITKTAFWYQQELNDLKAENTRLNSELLKEKESKKKLEAEIESYQS 611
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,163,717
Number of Sequences: 37866
Number of extensions: 521275
Number of successful extensions: 2626
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 2427
Number of HSP's gapped (non-prelim): 405
length of query: 336
length of database: 18,247,518
effective HSP length: 103
effective length of query: 233
effective length of database: 14,347,320
effective search space: 3342925560
effective search space used: 3342925560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.