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Search of human proteins with 32698982
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32698982 cytochrome b-561 domain containing 1 isoform 2
[Homo sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32698982 cytochrome b-561 domain containing 1 isoform 2 [Homo... 466 e-132
gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Hom... 423 e-119
gi|197304729 cytochrome b-561 domain containing 1 isoform 3 [Hom... 343 9e-95
gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens] 215 3e-56
gi|197304733 cytochrome b-561 domain containing 1 isoform 5 [Hom... 101 6e-22
gi|197304731 cytochrome b-561 domain containing 1 isoform 4 [Hom... 101 6e-22
gi|188536036 cytochrome b reductase 1 isoform 1 [Homo sapiens] 59 3e-09
gi|63054832 cytochrome b-561 [Homo sapiens] 50 2e-06
gi|63054830 cytochrome b-561 [Homo sapiens] 50 2e-06
gi|63054828 cytochrome b-561 [Homo sapiens] 50 2e-06
gi|241896889 cytochrome b, ascorbate dependent 3 isoform 2 [Homo... 45 5e-05
gi|241896875 cytochrome b, ascorbate dependent 3 isoform 1 [Homo... 45 5e-05
gi|241896864 cytochrome b, ascorbate dependent 3 isoform 2 [Homo... 45 5e-05
gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo sa... 31 0.77
gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo sa... 31 0.77
gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo sa... 31 0.77
gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo sa... 31 0.77
gi|31881740 solute carrier family 12 (potassium/chloride transpo... 30 1.3
gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens] 30 2.2
gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens] 30 2.2
gi|42542381 solute carrier family 28, member 1 isoform 1 [Homo s... 28 5.0
gi|223468600 leishmanolysin-like isoform 1 [Homo sapiens] 28 8.5
gi|110556638 leishmanolysin-like isoform 2 [Homo sapiens] 28 8.5
gi|239755457 PREDICTED: similar to patatin-like phospholipase do... 28 8.5
>gi|32698982 cytochrome b-561 domain containing 1 isoform 2 [Homo
sapiens]
Length = 229
Score = 466 bits (1198), Expect = e-132
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGTSLFSWHPVFMA 60
MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGTSLFSWHPVFMA
Sbjct: 1 MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGTSLFSWHPVFMA 60
Query: 61 LAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSEL 120
LAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSEL
Sbjct: 61 LAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSEL 120
Query: 121 PHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVT 180
PHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVT
Sbjct: 121 PHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVT 180
Query: 181 VLLGMYSVWFQAQIKGAAWYLCLALPVYPALVIMHQISRSYLPRKKMEM 229
VLLGMYSVWFQAQIKGAAWYLCLALPVYPALVIMHQISRSYLPRKKMEM
Sbjct: 181 VLLGMYSVWFQAQIKGAAWYLCLALPVYPALVIMHQISRSYLPRKKMEM 229
>gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Homo
sapiens]
Length = 251
Score = 423 bits (1087), Expect = e-119
Identities = 220/251 (87%), Positives = 220/251 (87%), Gaps = 22/251 (8%)
Query: 1 MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGTSL--------- 51
MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGT
Sbjct: 1 MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGTKTGPLMEDRSE 60
Query: 52 ---FSW-HPVFMAL---------AFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQT 98
W P AL FCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQT
Sbjct: 61 GGRARWVMPEIPALWEADAGGSLEFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQT 120
Query: 99 LAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSR 158
LAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSR
Sbjct: 121 LAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSR 180
Query: 159 VARLKLYHLTCGLVVYLMATVTVLLGMYSVWFQAQIKGAAWYLCLALPVYPALVIMHQIS 218
VARLKLYHLTCGLVVYLMATVTVLLGMYSVWFQAQIKGAAWYLCLALPVYPALVIMHQIS
Sbjct: 181 VARLKLYHLTCGLVVYLMATVTVLLGMYSVWFQAQIKGAAWYLCLALPVYPALVIMHQIS 240
Query: 219 RSYLPRKKMEM 229
RSYLPRKKMEM
Sbjct: 241 RSYLPRKKMEM 251
>gi|197304729 cytochrome b-561 domain containing 1 isoform 3 [Homo
sapiens]
Length = 172
Score = 343 bits (879), Expect = 9e-95
Identities = 168/169 (99%), Positives = 168/169 (99%)
Query: 61 LAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSEL 120
L FCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSEL
Sbjct: 4 LEFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSEL 63
Query: 121 PHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVT 180
PHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVT
Sbjct: 64 PHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVT 123
Query: 181 VLLGMYSVWFQAQIKGAAWYLCLALPVYPALVIMHQISRSYLPRKKMEM 229
VLLGMYSVWFQAQIKGAAWYLCLALPVYPALVIMHQISRSYLPRKKMEM
Sbjct: 124 VLLGMYSVWFQAQIKGAAWYLCLALPVYPALVIMHQISRSYLPRKKMEM 172
>gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens]
Length = 222
Score = 215 bits (547), Expect = 3e-56
Identities = 111/214 (51%), Positives = 143/214 (66%)
Query: 15 EPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGTSLFSWHPVFMALAFCLCMAEAILLF 74
E + R LR SG AHLVALGFTIF+ L+RPG+SLFSWHPV M+LAF M EA+L+F
Sbjct: 8 ESHIYRALRTASGAAAHLVALGFTIFVAVLARPGSSLFSWHPVLMSLAFSFLMTEALLVF 67
Query: 75 SPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALT 134
SPE SL SRK R R HW Q LA+LCA LGLG +I + + HLV+ H G L
Sbjct: 68 SPESSLLHSLSRKGRARCHWVLQLLALLCALLGLGLVILHKEQLGKAHLVTRHGQAGLLA 127
Query: 135 LLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGMYSVWFQAQI 194
+L +Q G+ LL P+ +A+LKLYH T GLV YL+ + ++LLGM S+WF A +
Sbjct: 128 VLWAGLQCSGGVGLLYPKLLPRWPLAKLKLYHATSGLVGYLLGSASLLLGMCSLWFTASV 187
Query: 195 KGAAWYLCLALPVYPALVIMHQISRSYLPRKKME 228
GAAWYL + PV +LVIM+Q+S +YL RK+++
Sbjct: 188 TGAAWYLAVLCPVLTSLVIMNQVSNAYLYRKRIQ 221
>gi|197304733 cytochrome b-561 domain containing 1 isoform 5 [Homo
sapiens]
Length = 128
Score = 101 bits (251), Expect = 6e-22
Identities = 49/49 (100%), Positives = 49/49 (100%)
Query: 1 MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGT 49
MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGT
Sbjct: 1 MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGT 49
>gi|197304731 cytochrome b-561 domain containing 1 isoform 4 [Homo
sapiens]
Length = 133
Score = 101 bits (251), Expect = 6e-22
Identities = 49/49 (100%), Positives = 49/49 (100%)
Query: 1 MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGT 49
MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGT
Sbjct: 1 MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGT 49
>gi|188536036 cytochrome b reductase 1 isoform 1 [Homo sapiens]
Length = 286
Score = 58.9 bits (141), Expect = 3e-09
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Query: 27 GILAHLVALGFTI-FLTALSRPGTSL-FSWHPVFMALAFCLCMAEAILLFSPEHSLFFFC 84
G L+ + AL + + + L G++L F+WHPV M F AI+++ + + C
Sbjct: 20 GFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRLPWT--WKC 77
Query: 85 SRKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALC 144
S+ +H +A + A + + + + + + ++ S HSWVG + ++ +Q L
Sbjct: 78 SKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLS 137
Query: 145 GLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 185
G + A +S A L H+ G+V++ T L+G+
Sbjct: 138 GFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGL 178
>gi|63054832 cytochrome b-561 [Homo sapiens]
Length = 251
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 52 FSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFI 111
F+ HP+ M + A+L++ +F +++ LH A++ A +GL +
Sbjct: 50 FNAHPLCMVIGLIFLQGNALLVYR----VFRNEAKRTTKVLHGLLHIFALVIALVGLVAV 105
Query: 112 ISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGL 171
+ L S HSW G L + VQ L G A S +R + H+ G
Sbjct: 106 FDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGA 165
Query: 172 VVYLMATVTVLLGM 185
++L++ T LLG+
Sbjct: 166 TIFLLSVGTALLGL 179
>gi|63054830 cytochrome b-561 [Homo sapiens]
Length = 251
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 52 FSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFI 111
F+ HP+ M + A+L++ +F +++ LH A++ A +GL +
Sbjct: 50 FNAHPLCMVIGLIFLQGNALLVYR----VFRNEAKRTTKVLHGLLHIFALVIALVGLVAV 105
Query: 112 ISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGL 171
+ L S HSW G L + VQ L G A S +R + H+ G
Sbjct: 106 FDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGA 165
Query: 172 VVYLMATVTVLLGM 185
++L++ T LLG+
Sbjct: 166 TIFLLSVGTALLGL 179
>gi|63054828 cytochrome b-561 [Homo sapiens]
Length = 251
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 52 FSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFI 111
F+ HP+ M + A+L++ +F +++ LH A++ A +GL +
Sbjct: 50 FNAHPLCMVIGLIFLQGNALLVYR----VFRNEAKRTTKVLHGLLHIFALVIALVGLVAV 105
Query: 112 ISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGL 171
+ L S HSW G L + VQ L G A S +R + H+ G
Sbjct: 106 FDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGA 165
Query: 172 VVYLMATVTVLLGM 185
++L++ T LLG+
Sbjct: 166 TIFLLSVGTALLGL 179
>gi|241896889 cytochrome b, ascorbate dependent 3 isoform 2 [Homo
sapiens]
Length = 242
Score = 45.1 bits (105), Expect = 5e-05
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 37 FTIFLTALSRPGTS------LFSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARI 90
FTI+ R G + +F+WHPV M + A L++ S + +
Sbjct: 23 FTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRLPQS--WVGPKLPWK 80
Query: 91 RLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLC 150
LH A +A + +GL + + +L S HSW+G T+ A Q G +
Sbjct: 81 LLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFL 140
Query: 151 PRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 185
A + + LK H+ G + ++ +V+ G+
Sbjct: 141 LPWASMWLRSLLKPIHVFFGAAILSLSIASVISGI 175
>gi|241896875 cytochrome b, ascorbate dependent 3 isoform 1 [Homo
sapiens]
Length = 259
Score = 45.1 bits (105), Expect = 5e-05
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 37 FTIFLTALSRPGTS------LFSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARI 90
FTI+ R G + +F+WHPV M + A L++ S + +
Sbjct: 40 FTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRLPQS--WVGPKLPWK 97
Query: 91 RLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLC 150
LH A +A + +GL + + +L S HSW+G T+ A Q G +
Sbjct: 98 LLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFL 157
Query: 151 PRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 185
A + + LK H+ G + ++ +V+ G+
Sbjct: 158 LPWASMWLRSLLKPIHVFFGAAILSLSIASVISGI 192
>gi|241896864 cytochrome b, ascorbate dependent 3 isoform 2 [Homo
sapiens]
Length = 242
Score = 45.1 bits (105), Expect = 5e-05
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 37 FTIFLTALSRPGTS------LFSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARI 90
FTI+ R G + +F+WHPV M + A L++ S + +
Sbjct: 23 FTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRLPQS--WVGPKLPWK 80
Query: 91 RLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLC 150
LH A +A + +GL + + +L S HSW+G T+ A Q G +
Sbjct: 81 LLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFL 140
Query: 151 PRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 185
A + + LK H+ G + ++ +V+ G+
Sbjct: 141 LPWASMWLRSLLKPIHVFFGAAILSLSIASVISGI 175
>gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo
sapiens]
Length = 354
Score = 31.2 bits (69), Expect = 0.77
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 61 LAFCLCMAEAILLFSPEHSLFFFCS--------RKARIRLHWAGQTLAILCAALGLGFII 112
L C EA L+ LF+F + +K + + GQ L ++ AALGLGF+
Sbjct: 13 LPLCALTLEAALIL-----LFYFFTHYDASLEDQKGLVASYQVGQDLTVM-AALGLGFLT 66
Query: 113 SSRTRSELPHLVSWHSWVGALTLLATAVQ 141
S+ R SW S L +LA VQ
Sbjct: 67 SNFRRH------SWSSVAFNLFMLALGVQ 89
>gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo
sapiens]
Length = 267
Score = 31.2 bits (69), Expect = 0.77
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 61 LAFCLCMAEAILLFSPEHSLFFFCS--------RKARIRLHWAGQTLAILCAALGLGFII 112
L C EA L+ LF+F + +K + + GQ L ++ AALGLGF+
Sbjct: 13 LPLCALTLEAALIL-----LFYFFTHYDASLEDQKGLVASYQVGQDLTVM-AALGLGFLT 66
Query: 113 SSRTRSELPHLVSWHSWVGALTLLATAVQ 141
S+ R SW S L +LA VQ
Sbjct: 67 SNFRRH------SWSSVAFNLFMLALGVQ 89
>gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo
sapiens]
Length = 266
Score = 31.2 bits (69), Expect = 0.77
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 61 LAFCLCMAEAILLFSPEHSLFFFCS--------RKARIRLHWAGQTLAILCAALGLGFII 112
L C EA L+ LF+F + +K + + GQ L ++ AALGLGF+
Sbjct: 13 LPLCALTLEAALIL-----LFYFFTHYDASLEDQKGLVASYQVGQDLTVM-AALGLGFLT 66
Query: 113 SSRTRSELPHLVSWHSWVGALTLLATAVQ 141
S+ R SW S L +LA VQ
Sbjct: 67 SNFRRH------SWSSVAFNLFMLALGVQ 89
>gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo
sapiens]
Length = 417
Score = 31.2 bits (69), Expect = 0.77
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 61 LAFCLCMAEAILLFSPEHSLFFFCS--------RKARIRLHWAGQTLAILCAALGLGFII 112
L C EA L+ LF+F + +K + + GQ L ++ AALGLGF+
Sbjct: 13 LPLCALTLEAALIL-----LFYFFTHYDASLEDQKGLVASYQVGQDLTVM-AALGLGFLT 66
Query: 113 SSRTRSELPHLVSWHSWVGALTLLATAVQ 141
S+ R SW S L +LA VQ
Sbjct: 67 SNFRRH------SWSSVAFNLFMLALGVQ 89
>gi|31881740 solute carrier family 12 (potassium/chloride
transporters), member 9 [Homo sapiens]
Length = 914
Score = 30.4 bits (67), Expect = 1.3
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 46 RPGTSLFSWHPVFMALAFCLCMAEAILLFSP 76
RP SLFSWH + +A CL M + L SP
Sbjct: 448 RPTFSLFSWHTCLLGVASCLLM---MFLISP 475
>gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens]
Length = 321
Score = 29.6 bits (65), Expect = 2.2
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 86 RKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQ 141
+K + + GQ L ++ AA+GLGF+ SS R SW S L +LA VQ
Sbjct: 41 QKGLVASYQVGQDLTVM-AAIGLGFLTSSFRRH------SWSSVAFNLFMLALGVQ 89
>gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens]
Length = 417
Score = 29.6 bits (65), Expect = 2.2
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 86 RKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQ 141
+K + + GQ L ++ AA+GLGF+ SS R SW S L +LA VQ
Sbjct: 41 QKGLVASYQVGQDLTVM-AAIGLGFLTSSFRRH------SWSSVAFNLFMLALGVQ 89
>gi|42542381 solute carrier family 28, member 1 isoform 1 [Homo
sapiens]
Length = 649
Score = 28.5 bits (62), Expect = 5.0
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 12 PAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGTSL-FSWHPVFMALAF 63
P G PRL W +RG + A L L + L RP + F+ VF+AL F
Sbjct: 142 PQGHPRLLLWFKRGLALAAFL-GLVLWLSLDTSQRPEQLVSFAGICVFVALLF 193
>gi|223468600 leishmanolysin-like isoform 1 [Homo sapiens]
Length = 692
Score = 27.7 bits (60), Expect = 8.5
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
Query: 84 CSRKARIRLHWAGQTLAILCAALGLGFIIS------SRTRSELPHLVSWHSWVGALTLLA 137
C RK W + C+ GL + SR LP + + W+ LL
Sbjct: 574 CERKLSYP-DWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLC 632
Query: 138 TAVQALCGLC--LLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLG 184
+ C LC P A ++R L L + LVV T+ +LLG
Sbjct: 633 PSCWDFCELCPPETDPPATNLTRALPLDLCSCSSSLVV----TLWLLLG 677
>gi|110556638 leishmanolysin-like isoform 2 [Homo sapiens]
Length = 655
Score = 27.7 bits (60), Expect = 8.5
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
Query: 84 CSRKARIRLHWAGQTLAILCAALGLGFIIS------SRTRSELPHLVSWHSWVGALTLLA 137
C RK W + C+ GL + SR LP + + W+ LL
Sbjct: 537 CERKLSYP-DWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLC 595
Query: 138 TAVQALCGLC--LLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLG 184
+ C LC P A ++R L L + LVV T+ +LLG
Sbjct: 596 PSCWDFCELCPPETDPPATNLTRALPLDLCSCSSSLVV----TLWLLLG 640
>gi|239755457 PREDICTED: similar to patatin-like phospholipase
domain containing 2 [Homo sapiens]
Length = 226
Score = 27.7 bits (60), Expect = 8.5
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 103 CAALGLGFI-ISSRTRSELPHLVSWHSWV-GALTLLATAVQALCGLCLLCPRAAR 155
C LG+ ++ ++S R P LV+ + + GA TA + G+CL+ RAAR
Sbjct: 15 CGFLGVYYVGVASCLREHAPFLVANATHIYGASAGALTATALVTGVCLVPERAAR 69
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.332 0.140 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,538,517
Number of Sequences: 37866
Number of extensions: 339594
Number of successful extensions: 970
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 942
Number of HSP's gapped (non-prelim): 25
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.