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Search of human proteins with 32698700
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32698700 PHD finger protein 8 [Homo sapiens]
(1024 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32698700 PHD finger protein 8 [Homo sapiens] 2064 0.0
gi|117190342 PHD finger protein 2 [Homo sapiens] 940 0.0
gi|90093355 jumonji C domain containing histone demethylase 1 ho... 620 e-177
gi|54112382 F-box and leucine-rich repeat protein 10 isoform a [... 291 2e-78
gi|54112380 F-box and leucine-rich repeat protein 10 isoform b [... 291 2e-78
gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens] 283 4e-76
gi|38788260 bromodomain PHD finger transcription factor isoform ... 71 6e-12
gi|38788274 bromodomain PHD finger transcription factor isoform ... 71 6e-12
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 64 7e-10
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens] 64 7e-10
gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens] 64 7e-10
gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens] 64 7e-10
gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens] 62 4e-09
gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens] 62 4e-09
gi|239740940 PREDICTED: hypothetical protein XP_002344108 [Homo ... 52 4e-06
gi|169211979 PREDICTED: hypothetical protein [Homo sapiens] 51 6e-06
gi|116089335 BR serine/threonine kinase 2 [Homo sapiens] 46 2e-04
gi|154426264 ubiquitin protein ligase E3 component n-recognin 7 ... 45 3e-04
gi|154426322 ubiquitin protein ligase E3 component n-recognin 7 ... 45 3e-04
gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens] 45 5e-04
gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens] 45 5e-04
gi|117414152 transcription factor 19 [Homo sapiens] 44 6e-04
gi|117414156 transcription factor 19 [Homo sapiens] 44 6e-04
gi|7662018 PHD finger protein 3 [Homo sapiens] 42 0.002
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 42 0.003
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa... 42 0.003
gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H... 42 0.003
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho... 42 0.003
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H... 42 0.003
gi|116268091 PHD finger protein 23 [Homo sapiens] 42 0.004
>gi|32698700 PHD finger protein 8 [Homo sapiens]
Length = 1024
Score = 2064 bits (5348), Expect = 0.0
Identities = 1024/1024 (100%), Positives = 1024/1024 (100%)
Query: 1 MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPS 60
MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPS
Sbjct: 1 MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPS 60
Query: 61 IMKKRRGSSKGHDTHKGKPVKTGSPTFVRELRSRTFDSSDEVILKPTGNQLTVEFLEENS 120
IMKKRRGSSKGHDTHKGKPVKTGSPTFVRELRSRTFDSSDEVILKPTGNQLTVEFLEENS
Sbjct: 61 IMKKRRGSSKGHDTHKGKPVKTGSPTFVRELRSRTFDSSDEVILKPTGNQLTVEFLEENS 120
Query: 121 FSVPILVLKKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVTRQADCKMKLGDFVKYYY 180
FSVPILVLKKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVTRQADCKMKLGDFVKYYY
Sbjct: 121 FSVPILVLKKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVTRQADCKMKLGDFVKYYY 180
Query: 181 SGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVR 240
SGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVR
Sbjct: 181 SGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVR 240
Query: 241 DSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC 300
DSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC
Sbjct: 241 DSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC 300
Query: 301 YKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFR 360
YKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFR
Sbjct: 301 YKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFR 360
Query: 361 FPNFETICWYVGKHILDIFRGLRENRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEI 420
FPNFETICWYVGKHILDIFRGLRENRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEI
Sbjct: 361 FPNFETICWYVGKHILDIFRGLRENRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEI 420
Query: 421 PETVRTVQLIKDLAREIRLVEDIFQQNVGKTSNIFGLQRIFPAGSIPLTRPAHSTSVSMS 480
PETVRTVQLIKDLAREIRLVEDIFQQNVGKTSNIFGLQRIFPAGSIPLTRPAHSTSVSMS
Sbjct: 421 PETVRTVQLIKDLAREIRLVEDIFQQNVGKTSNIFGLQRIFPAGSIPLTRPAHSTSVSMS 480
Query: 481 RLSLPSKNGSKKKGLKPKELFKKAERKGKESSALGPAGQLSYNLMDTYSHQALKTGSFQK 540
RLSLPSKNGSKKKGLKPKELFKKAERKGKESSALGPAGQLSYNLMDTYSHQALKTGSFQK
Sbjct: 481 RLSLPSKNGSKKKGLKPKELFKKAERKGKESSALGPAGQLSYNLMDTYSHQALKTGSFQK 540
Query: 541 AKFNITGACLNDSDDDSPDLDLDGNESPLALLMSNGSTKRVKSLSKSRRTKIAKKVDKAR 600
AKFNITGACLNDSDDDSPDLDLDGNESPLALLMSNGSTKRVKSLSKSRRTKIAKKVDKAR
Sbjct: 541 AKFNITGACLNDSDDDSPDLDLDGNESPLALLMSNGSTKRVKSLSKSRRTKIAKKVDKAR 600
Query: 601 LMAEQVMEDEFDLDSDDELQIDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEV 660
LMAEQVMEDEFDLDSDDELQIDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEV
Sbjct: 601 LMAEQVMEDEFDLDSDDELQIDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEV 660
Query: 661 EFDIEEDYTTDEDMVEGVEGKLGNGSGAGGILDLLKASRQVGGPDYAALTEAPASPSTQE 720
EFDIEEDYTTDEDMVEGVEGKLGNGSGAGGILDLLKASRQVGGPDYAALTEAPASPSTQE
Sbjct: 661 EFDIEEDYTTDEDMVEGVEGKLGNGSGAGGILDLLKASRQVGGPDYAALTEAPASPSTQE 720
Query: 721 AIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSNSPASQRTPGKRPI 780
AIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSNSPASQRTPGKRPI
Sbjct: 721 AIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSNSPASQRTPGKRPI 780
Query: 781 KRPAYWRTESEEEEENASLDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPKKKKNSDD 840
KRPAYWRTESEEEEENASLDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPKKKKNSDD
Sbjct: 781 KRPAYWRTESEEEEENASLDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPKKKKNSDD 840
Query: 841 APWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKKPLL 900
APWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKKPLL
Sbjct: 841 APWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKKPLL 900
Query: 901 KEVEQPRPQDSNLSLTVPAPTVAATPQLVTSSSPLPPPEPKQEALSGSLADHEYTARPNA 960
KEVEQPRPQDSNLSLTVPAPTVAATPQLVTSSSPLPPPEPKQEALSGSLADHEYTARPNA
Sbjct: 901 KEVEQPRPQDSNLSLTVPAPTVAATPQLVTSSSPLPPPEPKQEALSGSLADHEYTARPNA 960
Query: 961 FGMAQANRSTTPMAPGVFLTQRRPSVGSQSNQAGQGKRPKKGLATAKQRLGRILKIHRNG 1020
FGMAQANRSTTPMAPGVFLTQRRPSVGSQSNQAGQGKRPKKGLATAKQRLGRILKIHRNG
Sbjct: 961 FGMAQANRSTTPMAPGVFLTQRRPSVGSQSNQAGQGKRPKKGLATAKQRLGRILKIHRNG 1020
Query: 1021 KLLL 1024
KLLL
Sbjct: 1021 KLLL 1024
>gi|117190342 PHD finger protein 2 [Homo sapiens]
Length = 1096
Score = 940 bits (2429), Expect = 0.0
Identities = 533/1122 (47%), Positives = 697/1122 (62%), Gaps = 124/1122 (11%)
Query: 1 MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPS 60
MA+VPVYC+CRLPYDVTRFMIECD C+DWFHGSCVGVEEE+A DID+YHCPNCE HG S
Sbjct: 1 MATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS 60
Query: 61 IMKKRR-----GSSKGHDTHKGKPVKTGSPTFVRELRSRTFDSSDEVILKPTGNQLTVEF 115
+KK+R G + D KPV+ GS F++ELRSRTF S+++V+ + G+QLT+ +
Sbjct: 61 TLKKKRTWHKHGPGQAPDV---KPVQNGSQLFIKELRSRTFPSAEDVVARVPGSQLTLGY 117
Query: 116 LEENSFSVPILVLKKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVTRQADCKMKLGDF 175
+EE+ F+ PILV KKDGLG+ +P+P+F V DVE+YVG ++ +DV DVT+Q DCKMKL +F
Sbjct: 118 MEEHGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEF 177
Query: 176 VKYYYSGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYC 235
V YYYS R++VLNV +LEFSDTR+S+ VE P IV+KLSWVEN WP++ + +P V KYC
Sbjct: 178 VDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYC 237
Query: 236 LMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGD 295
L+ V+DSYTDFHID GG S WYHVLKGEK FYLIRP +AN++L+E W S+SN +EMFF D
Sbjct: 238 LICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFAD 297
Query: 296 QVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLST 355
QVDKCYKC VKQGQTLFIP+GWI+A LTPVDCLAF G+FLHSL++EMQ++AYE+E+RL
Sbjct: 298 QVDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKL 357
Query: 356 ADLFRFPNFETICWYVGKHILDIFRGLRENRRHPASYLVHGGKALNLAFRAWTRKEALPD 415
L +FPNFET CWY+GKH+L+ F+G ++ + +LV G K LN AFR+WT+K+AL +
Sbjct: 358 GSLTQFPNFETACWYMGKHLLEAFKGSHKSGKQLPPHLVQGAKILNGAFRSWTKKQALAE 417
Query: 416 HEDEIPETVRTVQLIKDLAREIRLVEDIFQQNVGKTSNIFGLQRIF--------PAGSIP 467
HEDE+PE + QLIKDLA+EIRL E+ + + + + + P I
Sbjct: 418 HEDELPEHFKPSQLIKDLAKEIRLSENASKAVRPEVNTVASSDEVCDGDREKEEPPSPIE 477
Query: 468 LTRP-------AHSTSVSMSRLSLPSKNGSKKKGLKPK------ELFKKAERKGKESSAL 514
T P + + ++ PSK K KP +L ++KGK+S
Sbjct: 478 ATPPQSLLEKVSKKKTPKTVKMPKPSKIPKPPKPPKPPRPPKTLKLKDGGKKKGKKSRES 537
Query: 515 GPAGQLSYNLMDTYSHQAL------KTGSFQKAKFNITGACLNDSDDDSPDLDLD----- 563
+ +L++ ++ +AL K G K+ ++ + +D L++
Sbjct: 538 ASPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLSVPNKDVVHMQNDVERLEIREQTKS 597
Query: 564 --------GNESPLALLMSNGSTKRVKS-LSKSRRTKIAKKVDKARLMAEQVM------- 607
N P +LL K KS L+ ++ K + +L+ + +
Sbjct: 598 KSEAKWKYKNSKPDSLLKMEEEQKLEKSPLAGNKDNKFSFSFSNKKLLGSKALRPPTSPG 657
Query: 608 ----------------EDEFDLDSDD-ELQIDE-------RLGKEKATLIIRPKFPRKLP 643
DE++ SDD EL+IDE K + ++ K P
Sbjct: 658 VFGALQNFKEDKPKPVRDEYEYVSDDGELKIDEFPIRRKKNAPKRDLSFLLDKKAVLPTP 717
Query: 644 RAKPCSDPNRVR-----EPGEVEFDIEEDYTTDEDMVEGVEGKLGNGSGAGGILDLLKAS 698
KP D + + G + D TD K +GS A GILDLL+AS
Sbjct: 718 VTKPKLDSAAYKSDDSSDEGSLHID------TDTKPGRNARVKKESGSSAAGILDLLQAS 771
Query: 699 RQVGGPDYAALTEAPASPSTQEAIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSS 758
+VG +Y ++ PASPSTQEAIQGML MANLQ+S S LQ W GQ + GSS
Sbjct: 772 EEVGALEYNPSSQPPASPSTQEAIQGMLSMANLQASD-----SCLQTTWGAGQ--AKGSS 824
Query: 759 SSGLGTVSNSPASQRTPGKRPIKRPAYWRTESEEEEENASLDEQDSLGACFKDAEYIYPS 818
+ G N S ++ GKR +KR A + ++ EE EQD L ACFKD++Y+YPS
Sbjct: 825 LAAHGARKNGGGSGKSAGKRLLKRAAKNSVDLDDYEE-----EQDHLDACFKDSDYVYPS 879
Query: 819 LESDDDDPALKSRPKKKKNSDDAPWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAA 878
LESD+D+P KSR KK+K SDDAP+SP ARV P++P+QDRPVREGTRVASIETGLAAAAA
Sbjct: 880 LESDEDNPIFKSRSKKRKGSDDAPYSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAA 939
Query: 879 KLAQQELQKAQKKKYIKKKPLLKEVEQPRPQDSNLSLTVPAPTVAATPQLVTSSSPLP-- 936
KL+QQE QK++KKK K+K L P ++ S++ + + TP T +S P
Sbjct: 940 KLSQQEEQKSKKKKSAKRK-LTPNTTSP---STSTSISAGTTSTSTTPASTTPASTTPAS 995
Query: 937 -------------PPEPKQEALSGSLADHEYTARPNAFGMAQANRSTTPMAPGVFLTQRR 983
PEP E+ S SLADHEYTA F AQA R++ PMAPGVFLTQRR
Sbjct: 996 TSTASSQASQEGSSPEPPPESHSSSLADHEYTA-AGTFTGAQAGRTSQPMAPGVFLTQRR 1054
Query: 984 PSVGS-QSNQAGQGKRPKKGLATAKQRLGRILKIHRNGKLLL 1024
PS S +N A +GKR KKG+ATAKQRLG+ILKIHRNGKLLL
Sbjct: 1055 PSASSPNNNTAAKGKRTKKGMATAKQRLGKILKIHRNGKLLL 1096
>gi|90093355 jumonji C domain containing histone demethylase 1
homolog D [Homo sapiens]
Length = 941
Score = 620 bits (1600), Expect = e-177
Identities = 363/825 (44%), Positives = 492/825 (59%), Gaps = 73/825 (8%)
Query: 5 PVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIMKK 64
PVYC+CR PYDV RFMIECD+C+DWFHGSCVGVEE A DIDLYHCPNC VLHG S+MKK
Sbjct: 37 PVYCVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLHGSSLMKK 96
Query: 65 RRGSSKGHDTHK----GKPVKTGSPTFVRELRSRTFDSSDEVILKPTGNQLTVEFLEENS 120
RR + HD + KPV+ G+ TF++ELRSR F S+DE+I+K G+QLT +LE++
Sbjct: 97 RRNWHR-HDYTEIDDGSKPVQAGTRTFIKELRSRVFPSADEIIIKMHGSQLTQRYLEKHG 155
Query: 121 FSVPILVLKKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVTRQADCKMKLGDFVKYYY 180
F VPI+V K D LG+ LPSP+F+V DVE YVG DK IDVIDV RQAD KM L ++VKY+
Sbjct: 156 FDVPIMVPKLDDLGLRLPSPTFSVMDVERYVGGDKVIDVIDVARQADSKMTLHNYVKYFM 215
Query: 181 SGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVR 240
+ R KVLNVISLEFSDT++S LVE P I +KLSWVEN WP++ VF +P VQKYCLM V+
Sbjct: 216 NPNRPKVLNVISLEFSDTKMSELVEVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGVQ 275
Query: 241 DSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC 300
DSYTDFHIDFGGTSVWYHVL GEKIFYLI+PT+ NL +E WSSS Q+E+FFGD+VDKC
Sbjct: 276 DSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKC 335
Query: 301 YKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFR 360
YKC VKQG TLF+PTGWIHAVLT DC+AFGGNFLH+LNI MQL+ YE+EKRL T DLF+
Sbjct: 336 YKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFK 395
Query: 361 FPNFETICWYVGKHILDIFRGLRENRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEI 420
FP FE ICW+V K++L+ + LRE+ P +YLV G KAL+ A + W +KE + +H EI
Sbjct: 396 FPFFEAICWFVAKNLLETLKELREDGFQPQTYLVQGVKALHTALKLWMKKELVSEHAFEI 455
Query: 421 PETVRTVQLIKDLAREIRLVEDIFQQNVGKTSNIFGLQRIFPAG--SIPLTRPAHSTSVS 478
P+ VR LIK+L++ IR +E+ GK G+ + P S T P HS
Sbjct: 456 PDNVRPGHLIKELSKVIRAIEE----ENGKPVKSQGIPIVCPVSRSSNEATSPYHS---- 507
Query: 479 MSRLSLPSKNGSKKKGLKPKELFKKAERKGKESSALGPAGQLSYNLMDTYSHQALKTGSF 538
++ RK ++ + P+ + ++++ ++ + LK
Sbjct: 508 -----------------------RRKMRKLRDHNVRTPS---NLDILELHTREVLKRLEM 541
Query: 539 QKAKFNITGACLNDS-----DDDSPDLDLDGNESPLALLMSNGSTKRVKSLSKSRRTKIA 593
+ +I + LN S + ++ L LL++NG + K R A
Sbjct: 542 CPWEEDILSSKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGR------IIKDERQPFA 595
Query: 594 KKVDKARLMAEQVMEDEFDLDSDDELQIDERLG-----KEKATLIIRPKFPRKLP----R 644
D++ A+ E++ +++I+E G E++ + F R R
Sbjct: 596 ---DQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTRVKSELRSR 652
Query: 645 AKPCSDPNRVREPGEVEFDIEEDYTTDEDMVEGVEGK---LGNGSGAGGIL-DLLKASRQ 700
+ SD + + G ++ +TT+E G E K N ++ + L+ S++
Sbjct: 653 SSGYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQK 712
Query: 701 VGGPDYAALTEAPASPSTQE-AIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSS 759
+ E P S ST+E AIQGML MA L S+ +Q+ G+ S S
Sbjct: 713 PSRSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTC--LQRQIQSTDCSGERNSLQDPS 770
Query: 760 SGLGTVSNSPASQRTPGKRPIKRPAYWRTESEEEEENASLDEQDS 804
S G SN Q +P++ + +TE + ++ + + D+
Sbjct: 771 SCHG--SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDT 813
Score = 55.5 bits (132), Expect = 3e-07
Identities = 25/31 (80%), Positives = 30/31 (96%)
Query: 990 SNQAGQGKRPKKGLATAKQRLGRILKIHRNG 1020
SNQA +GKRPKKG+ATAKQRLG+ILK++RNG
Sbjct: 905 SNQATKGKRPKKGMATAKQRLGKILKLNRNG 935
>gi|54112382 F-box and leucine-rich repeat protein 10 isoform a
[Homo sapiens]
Length = 1336
Score = 291 bits (745), Expect = 2e-78
Identities = 140/296 (47%), Positives = 194/296 (65%), Gaps = 16/296 (5%)
Query: 90 ELRSRTFDSSDEVILKPTGNQLTVEFLEENSFSVPILVLKKDGLGMTLPSPSFTVRDVEH 149
+LRS+ + + + G E+++ + VP++ +KDGLG+ +P P FTVRDV+
Sbjct: 73 KLRSQLYQG--DFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKL 130
Query: 150 YVGSDKEIDVIDVTRQADCKMKLGDFVKYYYS--GKREKVLNVISLEFSDTRLSNLVETP 207
VGS + +DV+DV Q +M + FV+YY + +R+K+ NVISLEFS T+L +LV+ P
Sbjct: 131 LVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRP 190
Query: 208 KIVRKLSWVENLWPEE------------CVFERPNVQKYCLMSVRDSYTDFHIDFGGTSV 255
+V + WV+N+WP+ + P V+KYCLMSV+ +TDFHIDFGGTSV
Sbjct: 191 TVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSV 250
Query: 256 WYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPT 315
WYHV +G KIF+LI PT NL L+E W S Q+++F GD+V++C + +KQG T FIP+
Sbjct: 251 WYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPS 310
Query: 316 GWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYV 371
GWIHAV TPVD L FGGN LHS N+ MQL+ YEIE R FR+P + +CWYV
Sbjct: 311 GWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYV 366
Score = 31.2 bits (69), Expect = 5.2
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 20 MIECDMCQDWFHGSCVGVEEEKAADID----LYHCPNCEVLHGPSIMKKRRG 67
++EC +C + H C+ ++E + D + CP C H K++RG
Sbjct: 685 LMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCN--HAGKTGKQKRG 734
>gi|54112380 F-box and leucine-rich repeat protein 10 isoform b
[Homo sapiens]
Length = 1265
Score = 291 bits (745), Expect = 2e-78
Identities = 140/296 (47%), Positives = 194/296 (65%), Gaps = 16/296 (5%)
Query: 90 ELRSRTFDSSDEVILKPTGNQLTVEFLEENSFSVPILVLKKDGLGMTLPSPSFTVRDVEH 149
+LRS+ + + + G E+++ + VP++ +KDGLG+ +P P FTVRDV+
Sbjct: 42 KLRSQLYQG--DFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKL 99
Query: 150 YVGSDKEIDVIDVTRQADCKMKLGDFVKYYYS--GKREKVLNVISLEFSDTRLSNLVETP 207
VGS + +DV+DV Q +M + FV+YY + +R+K+ NVISLEFS T+L +LV+ P
Sbjct: 100 LVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRP 159
Query: 208 KIVRKLSWVENLWPEE------------CVFERPNVQKYCLMSVRDSYTDFHIDFGGTSV 255
+V + WV+N+WP+ + P V+KYCLMSV+ +TDFHIDFGGTSV
Sbjct: 160 TVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSV 219
Query: 256 WYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPT 315
WYHV +G KIF+LI PT NL L+E W S Q+++F GD+V++C + +KQG T FIP+
Sbjct: 220 WYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPS 279
Query: 316 GWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYV 371
GWIHAV TPVD L FGGN LHS N+ MQL+ YEIE R FR+P + +CWYV
Sbjct: 280 GWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYV 335
Score = 31.2 bits (69), Expect = 5.2
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 20 MIECDMCQDWFHGSCVGVEEEKAADID----LYHCPNCEVLHGPSIMKKRRG 67
++EC +C + H C+ ++E + D + CP C H K++RG
Sbjct: 654 LMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCN--HAGKTGKQKRG 703
>gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens]
Length = 1162
Score = 283 bits (725), Expect = 4e-76
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 14/303 (4%)
Query: 83 GSPTFVRELRSRTFDSSDEVILKPTGNQLTVEFLEENSFSVPILVLKKDGLGMTLPSPSF 142
G TF E + T + + G VE+++ P++ DGLG+ +P P F
Sbjct: 34 GKRTFDLEEKLHTNKYNANFVTFMEGKDFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDF 93
Query: 143 TVRDVEHYVGSDKEIDVIDVTRQADCKMKLGDFVKYYYSGK--REKVLNVISLEFSDTRL 200
TV DV+ VGS + +DV+DV Q +M + + +YY + + REK+ NVISLEFS TRL
Sbjct: 94 TVNDVKMCVGSRRMVDVMDVNTQKGIEMTMAQWTRYYETPEEEREKLYNVISLEFSHTRL 153
Query: 201 SNLVETPKIVRKLSWVENLWPEECV------------FERPNVQKYCLMSVRDSYTDFHI 248
N+V+ P V + WV+N+WP + P VQKYCLMSVR YTDFH+
Sbjct: 154 ENMVQRPSTVDFIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMSVRGCYTDFHV 213
Query: 249 DFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQG 308
DFGGTSVWYH+ +G K+F+LI PT NL L+E W S Q ++F GD+V C + +KQG
Sbjct: 214 DFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGKQGDIFLGDRVSDCQRIELKQG 273
Query: 309 QTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETIC 368
T IP+GWIHAV TP D L FGGNFLHS NI MQLK Y IE R + FR+P + +C
Sbjct: 274 YTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMC 333
Query: 369 WYV 371
WYV
Sbjct: 334 WYV 336
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 70.9 bits (172), Expect = 6e-12
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
+YC+C+ PYD ++F I CD CQ+W+HG CVG+ + +A ID Y CP C+
Sbjct: 2725 LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ 2773
Score = 37.7 bits (86), Expect = 0.056
Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 30/181 (16%)
Query: 708 ALTEAPASPSTQEAIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSN 767
A +A +P T+ + + + PA S A GG+ G + G G
Sbjct: 52 AAAQAEVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGG---G 108
Query: 768 SPASQRTPGKRPIKRPAYWRTESEEEEENASL--------------------DEQDSLGA 807
++ T +R + + Y ESEEEEE + DE+D +
Sbjct: 109 GHLARTTAARRAVNKVVYDDHESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEE 168
Query: 808 CFKDAEYIYPSLESDDDDPALKSRPKKKKNS--DDAPWSPKARV----TPTLPKQDRPVR 861
D++Y +E DDDD + + + +S P K RV +P L ++D P
Sbjct: 169 DDDDSDY-PEEMEDDDDDASYCTESSFRSHSTYSSTPGRRKPRVHRPRSPILEEKDIPPL 227
Query: 862 E 862
E
Sbjct: 228 E 228
Score = 32.3 bits (72), Expect = 2.3
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 851 PTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQ------KKKYIKKKPLLKEVE 904
P PKQ PV T VA E L A + E +KAQ KK+ ++KP +
Sbjct: 1998 PETPKQTGPVIIETWVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPTVIATS 2057
Query: 905 QPRPQDSNLSLTVPAPTVAATP 926
P S S PA V P
Sbjct: 2058 TTSPTSSTTSTISPAQKVMVAP 2079
Score = 30.8 bits (68), Expect = 6.8
Identities = 37/158 (23%), Positives = 54/158 (34%), Gaps = 34/158 (21%)
Query: 791 EEEEENASLDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPKKKKNSDDAPWSPKARVT 850
EE E++ + E DS A E+ SLE D DD K DD
Sbjct: 574 EETEKDKNETENDSKDAEKNREEFEDQSLEKDSDD----------KTPDD---------D 614
Query: 851 PTLPKQDRPVREGTRVASIETGLAAAAAKLAQQE------------LQKAQKKKYIKKKP 898
P K + P G + S+ L +E L + + +K
Sbjct: 615 PEQGKSEEPTEVGDKGNSVSANLGDNTTNATSEETSPSEGRSPVGCLSETPDSSNMAEKK 674
Query: 899 LLKEVEQPRPQDSNL---SLTVPAPTVAATPQLVTSSS 933
+ E+ Q P++ N S A T + P L S+S
Sbjct: 675 VASELPQDVPEEPNKTCESSNTSATTTSIQPNLENSNS 712
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 70.9 bits (172), Expect = 6e-12
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
+YC+C+ PYD ++F I CD CQ+W+HG CVG+ + +A ID Y CP C+
Sbjct: 2742 LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ 2790
Score = 37.7 bits (86), Expect = 0.056
Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 30/181 (16%)
Query: 708 ALTEAPASPSTQEAIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSN 767
A +A +P T+ + + + PA S A GG+ G + G G
Sbjct: 52 AAAQAEVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGG---G 108
Query: 768 SPASQRTPGKRPIKRPAYWRTESEEEEENASL--------------------DEQDSLGA 807
++ T +R + + Y ESEEEEE + DE+D +
Sbjct: 109 GHLARTTAARRAVNKVVYDDHESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEE 168
Query: 808 CFKDAEYIYPSLESDDDDPALKSRPKKKKNS--DDAPWSPKARV----TPTLPKQDRPVR 861
D++Y +E DDDD + + + +S P K RV +P L ++D P
Sbjct: 169 DDDDSDY-PEEMEDDDDDASYCTESSFRSHSTYSSTPGRRKPRVHRPRSPILEEKDIPPL 227
Query: 862 E 862
E
Sbjct: 228 E 228
Score = 32.3 bits (72), Expect = 2.3
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 851 PTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQ------KKKYIKKKPLLKEVE 904
P PKQ PV T VA E L A + E +KAQ KK+ ++KP +
Sbjct: 1872 PETPKQTGPVIIETWVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPTVIATS 1931
Query: 905 QPRPQDSNLSLTVPAPTVAATP 926
P S S PA V P
Sbjct: 1932 TTSPTSSTTSTISPAQKVMVAP 1953
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 63.9 bits (154), Expect = 7e-10
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDL----YHCPNCEVL 56
+YC+CR P++ RFMI CD C++WFHG CVG+ E + ++ Y CPNC +L
Sbjct: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 322
>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
Length = 1189
Score = 63.9 bits (154), Expect = 7e-10
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDL----YHCPNCEVL 56
+YC+CR P++ RFMI CD C++WFHG CVG+ E + ++ Y CPNC +L
Sbjct: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 322
>gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 63.9 bits (154), Expect = 7e-10
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDL----YHCPNCEVL 56
+YC+CR P++ RFMI CD C++WFHG CVG+ E + ++ Y CPNC +L
Sbjct: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 322
>gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 63.9 bits (154), Expect = 7e-10
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDL----YHCPNCEVL 56
+YC+CR P++ RFMI CD C++WFHG CVG+ E + ++ Y CPNC +L
Sbjct: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 322
>gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]
Length = 660
Score = 61.6 bits (148), Expect = 4e-09
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 3 SVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIM 62
+ P+YC+CR P D+ FMI CD C +WFHG C+ + E+ A I ++C C +
Sbjct: 24 NAPIYCICRKP-DINCFMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPKLEI 82
Query: 63 KKRRGSSKGHD 73
+ R S+ D
Sbjct: 83 RYRHKKSRERD 93
>gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]
Length = 656
Score = 61.6 bits (148), Expect = 4e-09
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 3 SVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIM 62
+ P+YC+CR P D+ FMI CD C +WFHG C+ + E+ A I ++C C +
Sbjct: 24 NAPIYCICRKP-DINCFMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPKLEI 82
Query: 63 KKRRGSSKGHD 73
+ R S+ D
Sbjct: 83 RYRHKKSRERD 93
>gi|239740940 PREDICTED: hypothetical protein XP_002344108 [Homo
sapiens]
Length = 168
Score = 51.6 bits (122), Expect = 4e-06
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 15 DVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
+ +RF I CD+C +W++G CVG+ E++A +D+Y C +C+
Sbjct: 26 NTSRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCK 65
>gi|169211979 PREDICTED: hypothetical protein [Homo sapiens]
Length = 168
Score = 50.8 bits (120), Expect = 6e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 18 RFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
RF I CD+C +W++G CVG+ E++A +D+Y C +C+
Sbjct: 29 RFYIGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCK 65
>gi|116089335 BR serine/threonine kinase 2 [Homo sapiens]
Length = 668
Score = 46.2 bits (108), Expect = 2e-04
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 26/195 (13%)
Query: 777 KRPIKRPAYWRT-ESEEEEENASLDEQDSLGACFKDAEYIYPSLESDDDDPA------LK 829
++PI R R+ S E+ + LD SLG CF+D + L S++++ L
Sbjct: 280 EQPIPRKVQIRSLPSLEDIDPDVLDSMHSLG-CFRDRNKLLQDLLSEEENQEKMIYFLLL 338
Query: 830 SRPKKKKNSDDAPWSPKARVTPTLPKQD----------RPVREGTRVASIETGLAAAAAK 879
R ++ + +D P+ + P + D RP R+ V S+ G + A+
Sbjct: 339 DRKERYPSQEDEDLPPRNEIDPPRKRVDSPMLNRHGKRRPERKSMEVLSVTDGGSPVPAR 398
Query: 880 LAQQELQKAQKKKYIK-------KKPLLKEVEQPRPQDSNLSLTVPAPTVAATPQLVTSS 932
A + Q Q+ + I PL P P L P T TP+ +
Sbjct: 399 RAIEMAQHGQRSRSISGASSGLSTSPLSSPRVTPHPSPRGSPLPTPKGTPVHTPKESPAG 458
Query: 933 SPLPPPEPKQEALSG 947
+P P P P ++ G
Sbjct: 459 TPNPTP-PSSPSVGG 472
>gi|154426264 ubiquitin protein ligase E3 component n-recognin 7
(putative) isoform 3 [Homo sapiens]
Length = 349
Score = 45.1 bits (105), Expect = 3e-04
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 6 VYCLCRLPY-----DVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53
+YC+C+ PY ++ MI+C +C+DWFHG +G ++ D C C
Sbjct: 57 LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQAC 109
>gi|154426322 ubiquitin protein ligase E3 component n-recognin 7
(putative) isoform 2 [Homo sapiens]
Length = 425
Score = 45.1 bits (105), Expect = 3e-04
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 6 VYCLCRLPY-----DVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53
+YC+C+ PY ++ MI+C +C+DWFHG +G ++ D C C
Sbjct: 133 LYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQAC 185
>gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]
Length = 414
Score = 44.7 bits (104), Expect = 5e-04
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 169 KMKLGDFVKYYYSGKREKVLNVISLEFSD-TRLSNLVETPKIVRKLSWVENLWPEECVFE 227
KMK+ +++Y S + + L + + + + L+E K+ + + ++L+
Sbjct: 111 KMKMKYYIEYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPK--FFTDDLFQYAGEKR 168
Query: 228 RPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSN 287
RP ++ +M S T HID GTS W +++G K + L + + N
Sbjct: 169 RPPY-RWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGN 227
Query: 288 Q--------NEMFFGDQVD------KCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGN 333
Q N ++ Q+ K + K G+T+F+P GW H VL +A N
Sbjct: 228 QQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQN 287
Query: 334 FLHSLN 339
F S N
Sbjct: 288 FASSTN 293
>gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]
Length = 403
Score = 44.7 bits (104), Expect = 5e-04
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 169 KMKLGDFVKYYYSGKREKVLNVISLEFSD-TRLSNLVETPKIVRKLSWVENLWPEECVFE 227
KMK+ +++Y S + + L + + + + L+E K+ + + ++L+
Sbjct: 111 KMKMKYYIEYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPK--FFTDDLFQYAGEKR 168
Query: 228 RPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSN 287
RP ++ +M S T HID GTS W +++G K + L + + N
Sbjct: 169 RPPY-RWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGN 227
Query: 288 Q--------NEMFFGDQVD------KCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGN 333
Q N ++ Q+ K + K G+T+F+P GW H VL +A N
Sbjct: 228 QQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQN 287
Query: 334 FLHSLN 339
F S N
Sbjct: 288 FASSTN 293
>gi|117414152 transcription factor 19 [Homo sapiens]
Length = 345
Score = 44.3 bits (103), Expect = 6e-04
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 10 CRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53
C LP + T ++CD C WFH +CVG + A + D + CP C
Sbjct: 297 CCLPQEETVAWVQCDGCDVWFHVACVGCSIQAAREAD-FRCPGC 339
>gi|117414156 transcription factor 19 [Homo sapiens]
Length = 345
Score = 44.3 bits (103), Expect = 6e-04
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 10 CRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53
C LP + T ++CD C WFH +CVG + A + D + CP C
Sbjct: 297 CCLPQEETVAWVQCDGCDVWFHVACVGCSIQAAREAD-FRCPGC 339
>gi|7662018 PHD finger protein 3 [Homo sapiens]
Length = 2039
Score = 42.4 bits (98), Expect = 0.002
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 10 CRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADI----DLYHCPNC 53
C+ P+ RFM+ C C DWFHG CVG+ +A + Y C C
Sbjct: 723 CKKPHG-NRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKC 769
>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
sapiens]
Length = 1690
Score = 42.0 bits (97), Expect = 0.003
Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 7 YCLCRLPYDVTRFMIECDMCQDWFHGSCV 35
+C+CR + FM++C++C+DWFH SCV
Sbjct: 1163 FCICRKT--ASGFMLQCELCKDWFHNSCV 1189
Score = 40.0 bits (92), Expect = 0.011
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 10 CRLPYDVTRFMIECDM-CQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGP 59
C+ P ++CD C +WFH CVGV E A + D Y C NC GP
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENED-YICINCAKKQGP 1664
>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
sapiens]
Length = 1641
Score = 42.0 bits (97), Expect = 0.003
Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 7 YCLCRLPYDVTRFMIECDMCQDWFHGSCV 35
+C+CR + FM++C++C+DWFH SCV
Sbjct: 1163 FCICRKT--ASGFMLQCELCKDWFHNSCV 1189
>gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo
sapiens]
Length = 1482
Score = 42.0 bits (97), Expect = 0.003
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
Query: 1 MASVPV-YCLC-RLPYDVTRFMIECDMCQDWFHGSCVGV 37
MAS P C+C ++P V +++CD+CQDWFHG CV V
Sbjct: 1110 MASSPTSICVCGQVPAGVG--VLQCDLCQDWFHGQCVSV 1146
>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
sapiens]
Length = 1539
Score = 42.0 bits (97), Expect = 0.003
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
Query: 1 MASVPV-YCLC-RLPYDVTRFMIECDMCQDWFHGSCVGV 37
MAS P C+C ++P V +++CD+CQDWFHG CV V
Sbjct: 1167 MASSPTSICVCGQVPAGVG--VLQCDLCQDWFHGQCVSV 1203
>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
sapiens]
Length = 1570
Score = 42.0 bits (97), Expect = 0.003
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
Query: 1 MASVPV-YCLC-RLPYDVTRFMIECDMCQDWFHGSCVGV 37
MAS P C+C ++P V +++CD+CQDWFHG CV V
Sbjct: 1198 MASSPTSICVCGQVPAGVG--VLQCDLCQDWFHGQCVSV 1234
>gi|116268091 PHD finger protein 23 [Homo sapiens]
Length = 403
Score = 41.6 bits (96), Expect = 0.004
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVL 56
+ C CR P+ R MIEC +C W H SC +++ D ++C C+ L
Sbjct: 340 ITCYCRKPF-AGRPMIECSLCGTWIHLSCAKIKKTNVP--DFFYCQKCKEL 387
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,877,879
Number of Sequences: 37866
Number of extensions: 2137613
Number of successful extensions: 9494
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 237
Number of HSP's that attempted gapping in prelim test: 8787
Number of HSP's gapped (non-prelim): 797
length of query: 1024
length of database: 18,247,518
effective HSP length: 112
effective length of query: 912
effective length of database: 14,006,526
effective search space: 12773951712
effective search space used: 12773951712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.