Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 32171247
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32171247 cyclin Y isoform 1 [Homo sapiens]
(341 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32171247 cyclin Y isoform 1 [Homo sapiens] 692 0.0
gi|190341110 cyclin Y isoform 2 [Homo sapiens] 580 e-166
gi|22749085 cyclin Y-like 1 isoform 2 [Homo sapiens] 447 e-126
gi|214830655 cyclin Y-like 1 isoform 1 [Homo sapiens] 322 3e-88
gi|239755288 PREDICTED: cyclin Y-like 2 [Homo sapiens] 313 2e-85
gi|239749780 PREDICTED: cyclin Y-like 2 [Homo sapiens] 313 2e-85
gi|239744040 PREDICTED: cyclin Y-like 2 [Homo sapiens] 313 2e-85
gi|239756576 PREDICTED: cyclin Y-like 3 [Homo sapiens] 207 1e-53
gi|239748884 PREDICTED: cyclin Y-like 3 [Homo sapiens] 207 1e-53
gi|239745552 PREDICTED: cyclin Y-like 3 [Homo sapiens] 207 1e-53
gi|221136914 ArfGAP with GTPase domain, ankyrin repeat and PH do... 92 5e-19
gi|156104893 ArfGAP with GTPase domain, ankyrin repeat and PH do... 92 5e-19
gi|117956371 ArfGAP with GTPase domain, ankyrin repeat and PH do... 92 5e-19
gi|117956373 ArfGAP with GTPase domain, ankyrin repeat and PH do... 92 7e-19
gi|166851846 centaurin, gamma-like family, member 3 [Homo sapiens] 88 1e-17
gi|239744074 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... 87 2e-17
gi|239744064 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... 87 2e-17
gi|169177621 PREDICTED: similar to hCG1647409 [Homo sapiens] 72 5e-13
gi|169179067 PREDICTED: similar to hCG1647409 [Homo sapiens] 72 5e-13
gi|169181261 PREDICTED: hypothetical protein LOC100132781 [Homo ... 72 5e-13
gi|238550159 estrogen-related receptor beta [Homo sapiens] 33 0.28
gi|41393547 neuroblastoma-amplified protein [Homo sapiens] 32 1.1
gi|5174615 COX4 neighbor isoform 1 [Homo sapiens] 30 3.1
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 30 4.1
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 30 4.1
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 30 4.1
gi|14149669 mitogen-activated protein kinase kinase kinase 7 int... 30 4.1
gi|117647226 RNA (guanine-9-) methyltransferase domain containin... 28 9.1
gi|12383066 axotrophin [Homo sapiens] 28 9.1
gi|46852398 biogenesis of lysosome-related organelles complex-1,... 28 9.1
>gi|32171247 cyclin Y isoform 1 [Homo sapiens]
Length = 341
Score = 692 bits (1786), Expect = 0.0
Identities = 341/341 (100%), Positives = 341/341 (100%)
Query: 1 MGNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGCNLQHISDRENIDDLNMEFNPS 60
MGNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGCNLQHISDRENIDDLNMEFNPS
Sbjct: 1 MGNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGCNLQHISDRENIDDLNMEFNPS 60
Query: 61 DHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQPNLKYTI 120
DHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQPNLKYTI
Sbjct: 61 DHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQPNLKYTI 120
Query: 121 KCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRFVRTLFS 180
KCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRFVRTLFS
Sbjct: 121 KCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRFVRTLFS 180
Query: 181 AAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWNVDYCQI 240
AAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWNVDYCQI
Sbjct: 181 AAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWNVDYCQI 240
Query: 241 LKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAH 300
LKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAH
Sbjct: 241 LKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAH 300
Query: 301 KLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS 341
KLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS
Sbjct: 301 KLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS 341
>gi|190341110 cyclin Y isoform 2 [Homo sapiens]
Length = 287
Score = 580 bits (1496), Expect = e-166
Identities = 287/287 (100%), Positives = 287/287 (100%)
Query: 55 MEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQP 114
MEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQP
Sbjct: 1 MEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQP 60
Query: 115 NLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRF 174
NLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRF
Sbjct: 61 NLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRF 120
Query: 175 VRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWN 234
VRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWN
Sbjct: 121 VRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWN 180
Query: 235 VDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPL 294
VDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPL
Sbjct: 181 VDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPL 240
Query: 295 SRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS 341
SRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS
Sbjct: 241 SRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS 287
>gi|22749085 cyclin Y-like 1 isoform 2 [Homo sapiens]
Length = 289
Score = 447 bits (1151), Expect = e-126
Identities = 229/291 (78%), Positives = 251/291 (86%), Gaps = 4/291 (1%)
Query: 51 DDLNMEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDST 110
+DL +E NPSDHPRASTIFLSKSQTDVREKRKS +NH PGQ+ +KYSSCSTIFLDDST
Sbjct: 3 EDLALESNPSDHPRASTIFLSKSQTDVREKRKSNHLNHVSPGQLTKKYSSCSTIFLDDST 62
Query: 111 VSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQ 170
VSQPNL+ T+KCV LAIYYHIKNRD + LDIFDE HPL++ +VP +Y KH+PE K
Sbjct: 63 VSQPNLRTTVKCVTLAIYYHIKNRDANRS--LDIFDERSHPLTREKVPEEYFKHDPEHKF 120
Query: 171 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQ 230
IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICP NWKRIVLGAILLASKVWDDQ
Sbjct: 121 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPTNWKRIVLGAILLASKVWDDQ 180
Query: 231 AVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFP 290
AVWNVDYCQILKDITVEDMNE+ER FLELLQFNINVP+SVYAKYYFDLRSLA+ NNL+F
Sbjct: 181 AVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKYYFDLRSLADDNNLNFL 240
Query: 291 LEPLSRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS 341
PLS+ERA LEAISRLCED KDL R+A +RS SADN + S AI+S
Sbjct: 241 FAPLSKERAQNLEAISRLCED--KDLCRAAMRRSFSADNFIGIQRSKAILS 289
>gi|214830655 cyclin Y-like 1 isoform 1 [Homo sapiens]
Length = 308
Score = 322 bits (825), Expect = 3e-88
Identities = 203/364 (55%), Positives = 227/364 (62%), Gaps = 79/364 (21%)
Query: 1 MGNTTSCCVS--SSPKLRRNAHSRLESY---------------------RPDTDLSREDT 37
MGNT +CCVS +SPKL R A S E Y P E
Sbjct: 1 MGNTLTCCVSPNASPKLGRRAGSA-ELYCASDIYEAVSGDAVAVAPAVVEPAELDFGEGE 59
Query: 38 GCNLQHISDRENIDDLNMEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARK 97
G +LQHISDRE +DL +E NPSDHPRAS
Sbjct: 60 GHHLQHISDREMPEDLALESNPSDHPRAS------------------------------- 88
Query: 98 YSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEV 157
TIFL S Q +++ K H+ + D L +I H + +V
Sbjct: 89 -----TIFLSKS---QTDVREKRKS------NHLNHCD-----LSNILP---HKEQREKV 126
Query: 158 PPDYDKHNPEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVL 217
P +Y KH+PE K IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICP NWKRIVL
Sbjct: 127 PEEYFKHDPEHKFIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPTNWKRIVL 186
Query: 218 GAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFD 277
GAILLASKVWDDQAVWNVDYCQILKDITVEDMNE+ER FLELLQFNINVP+SVYAKYYFD
Sbjct: 187 GAILLASKVWDDQAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKYYFD 246
Query: 278 LRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSP 337
LRSLA+ NNL+F PLS+ERA LEAISRLCED KDL R+A +RS SADN + S
Sbjct: 247 LRSLADDNNLNFLFAPLSKERAQNLEAISRLCED--KDLCRAAMRRSFSADNFIGIQRSK 304
Query: 338 AIIS 341
AI+S
Sbjct: 305 AILS 308
>gi|239755288 PREDICTED: cyclin Y-like 2 [Homo sapiens]
Length = 362
Score = 313 bits (801), Expect = 2e-85
Identities = 181/367 (49%), Positives = 236/367 (64%), Gaps = 33/367 (8%)
Query: 1 MGNTTSCCVS--SSPKLRRN----AHSRLESYR-----------------PDTDLSREDT 37
MGN +CCV +SP L ++ H E Y P
Sbjct: 1 MGNILTCCVCPRASPGLHQHQGLVCHCESEIYEAAAGDLIAGVPVAAAVEPGEVTFVAGE 60
Query: 38 GCNLQHISDRENIDDLNMEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARK 97
G ++ HI +RE +D+ +E NPSDHP+ASTIFL KSQTDV+EK+K ++
Sbjct: 61 GLHMHHICEREMPEDIPLEPNPSDHPKASTIFLRKSQTDVQEKKKKQLCKVSTE-HFTQQ 119
Query: 98 YSSCSTIFLDDSTVSQPNLKYTIKC---VALAIYYHIKNRDPDGRMLLDIFDENLHPLS- 153
YSSCSTIFLDDS SQP+L T+K + + Y K D L IFDE LHPL+
Sbjct: 120 YSSCSTIFLDDSIASQPHLTMTLKSXCDLGTILSYQAKR---DAHRSLGIFDEQLHPLTV 176
Query: 154 KSEVPPDYDKHNPEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWK 213
+ EV +Y K++PE K I+RFVRTLF A +LTAE AIV+L+Y+ERL++YA+IDICP NWK
Sbjct: 177 RKEVLEEYFKYDPEHKLIFRFVRTLFKAMRLTAEFAIVSLIYIERLVSYADIDICPTNWK 236
Query: 214 RIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAK 273
RIVLGAILLASKVW D AVWN DYC++ K+ITVE+MNELERQFL+L+ +N ++ +SVY++
Sbjct: 237 RIVLGAILLASKVWSDMAVWNEDYCKLFKNITVEEMNELERQFLKLINYNNSITNSVYSR 296
Query: 274 YYFDLRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLP 333
+YFDLR+LA N L P+ L RERA KLEA SR+ +DK +A+ S SAD+L
Sbjct: 297 FYFDLRTLAHNNGLYSPVYLLDRERAWKLEAFSRMEQDKV--FYSAAKNGSLSADDLIHL 354
Query: 334 RWSPAII 340
+ + AI+
Sbjct: 355 QRAKAIL 361
>gi|239749780 PREDICTED: cyclin Y-like 2 [Homo sapiens]
Length = 362
Score = 313 bits (801), Expect = 2e-85
Identities = 181/367 (49%), Positives = 236/367 (64%), Gaps = 33/367 (8%)
Query: 1 MGNTTSCCVS--SSPKLRRN----AHSRLESYR-----------------PDTDLSREDT 37
MGN +CCV +SP L ++ H E Y P
Sbjct: 1 MGNILTCCVCPRASPGLHQHQGLVCHCESEIYEAAAGDLIAGVPVAAAVEPGEVTFVAGE 60
Query: 38 GCNLQHISDRENIDDLNMEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARK 97
G ++ HI +RE +D+ +E NPSDHP+ASTIFL KSQTDV+EK+K ++
Sbjct: 61 GLHMHHICEREMPEDIPLEPNPSDHPKASTIFLRKSQTDVQEKKKKQLCKVSTE-HFTQQ 119
Query: 98 YSSCSTIFLDDSTVSQPNLKYTIKC---VALAIYYHIKNRDPDGRMLLDIFDENLHPLS- 153
YSSCSTIFLDDS SQP+L T+K + + Y K D L IFDE LHPL+
Sbjct: 120 YSSCSTIFLDDSIASQPHLTMTLKSXCDLGTILSYQAKR---DAHRSLGIFDEQLHPLTV 176
Query: 154 KSEVPPDYDKHNPEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWK 213
+ EV +Y K++PE K I+RFVRTLF A +LTAE AIV+L+Y+ERL++YA+IDICP NWK
Sbjct: 177 RKEVLEEYFKYDPEHKLIFRFVRTLFKAMRLTAEFAIVSLIYIERLVSYADIDICPTNWK 236
Query: 214 RIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAK 273
RIVLGAILLASKVW D AVWN DYC++ K+ITVE+MNELERQFL+L+ +N ++ +SVY++
Sbjct: 237 RIVLGAILLASKVWSDMAVWNEDYCKLFKNITVEEMNELERQFLKLINYNNSITNSVYSR 296
Query: 274 YYFDLRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLP 333
+YFDLR+LA N L P+ L RERA KLEA SR+ +DK +A+ S SAD+L
Sbjct: 297 FYFDLRTLAHNNGLYSPVYLLDRERAWKLEAFSRMEQDKV--FYSAAKNGSLSADDLIHL 354
Query: 334 RWSPAII 340
+ + AI+
Sbjct: 355 QRAKAIL 361
>gi|239744040 PREDICTED: cyclin Y-like 2 [Homo sapiens]
Length = 362
Score = 313 bits (801), Expect = 2e-85
Identities = 181/367 (49%), Positives = 236/367 (64%), Gaps = 33/367 (8%)
Query: 1 MGNTTSCCVS--SSPKLRRN----AHSRLESYR-----------------PDTDLSREDT 37
MGN +CCV +SP L ++ H E Y P
Sbjct: 1 MGNILTCCVCPRASPGLHQHQGLVCHCESEIYEAAAGDLIAGVPVAAAVEPGEVTFVAGE 60
Query: 38 GCNLQHISDRENIDDLNMEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARK 97
G ++ HI +RE +D+ +E NPSDHP+ASTIFL KSQTDV+EK+K ++
Sbjct: 61 GLHMHHICEREMPEDIPLEPNPSDHPKASTIFLRKSQTDVQEKKKKQLCKVSTE-HFTQQ 119
Query: 98 YSSCSTIFLDDSTVSQPNLKYTIKC---VALAIYYHIKNRDPDGRMLLDIFDENLHPLS- 153
YSSCSTIFLDDS SQP+L T+K + + Y K D L IFDE LHPL+
Sbjct: 120 YSSCSTIFLDDSIASQPHLTMTLKSXCDLGTILSYQAKR---DAHRSLGIFDEQLHPLTV 176
Query: 154 KSEVPPDYDKHNPEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWK 213
+ EV +Y K++PE K I+RFVRTLF A +LTAE AIV+L+Y+ERL++YA+IDICP NWK
Sbjct: 177 RKEVLEEYFKYDPEHKLIFRFVRTLFKAMRLTAEFAIVSLIYIERLVSYADIDICPTNWK 236
Query: 214 RIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAK 273
RIVLGAILLASKVW D AVWN DYC++ K+ITVE+MNELERQFL+L+ +N ++ +SVY++
Sbjct: 237 RIVLGAILLASKVWSDMAVWNEDYCKLFKNITVEEMNELERQFLKLINYNNSITNSVYSR 296
Query: 274 YYFDLRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLP 333
+YFDLR+LA N L P+ L RERA KLEA SR+ +DK +A+ S SAD+L
Sbjct: 297 FYFDLRTLAHNNGLYSPVYLLDRERAWKLEAFSRMEQDKV--FYSAAKNGSLSADDLIHL 354
Query: 334 RWSPAII 340
+ + AI+
Sbjct: 355 QRAKAIL 361
>gi|239756576 PREDICTED: cyclin Y-like 3 [Homo sapiens]
Length = 351
Score = 207 bits (526), Expect = 1e-53
Identities = 109/214 (50%), Positives = 148/214 (69%), Gaps = 14/214 (6%)
Query: 90 PPGQIARKYSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENL 149
PP + RKY SCSTI LD+ST SQP+L++T++ A NR L IF+E +
Sbjct: 16 PPWHLDRKYGSCSTILLDNSTASQPDLRHTLERYA--------NRS------LAIFEEPV 61
Query: 150 HPLSKSEVPPDYDKHNPEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICP 209
HPL + ++P KH+P++ I+R TLF +LTA CAIV LVY++RLLT A ID+CP
Sbjct: 62 HPLPQEKLPGKSFKHDPKRNCIFRHFCTLFQVIKLTAPCAIVALVYIKRLLTSANIDLCP 121
Query: 210 ANWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSS 269
NWK+IVLG +LLASKVW + +W+VD Q KD VE+M+++E+ FLELL+FNI+V +S
Sbjct: 122 TNWKKIVLGTMLLASKVWRNHGLWSVDDSQNSKDTAVENMSKMEKCFLELLEFNIHVSAS 181
Query: 270 VYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLE 303
VYAKYYFDL +LA ++L F L +++A KLE
Sbjct: 182 VYAKYYFDLCALANDHDLYFLFSFLHKDKAQKLE 215
>gi|239748884 PREDICTED: cyclin Y-like 3 [Homo sapiens]
Length = 351
Score = 207 bits (526), Expect = 1e-53
Identities = 109/214 (50%), Positives = 148/214 (69%), Gaps = 14/214 (6%)
Query: 90 PPGQIARKYSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENL 149
PP + RKY SCSTI LD+ST SQP+L++T++ A NR L IF+E +
Sbjct: 16 PPWHLDRKYGSCSTILLDNSTASQPDLRHTLERYA--------NRS------LAIFEEPV 61
Query: 150 HPLSKSEVPPDYDKHNPEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICP 209
HPL + ++P KH+P++ I+R TLF +LTA CAIV LVY++RLLT A ID+CP
Sbjct: 62 HPLPQEKLPGKSFKHDPKRNCIFRHFCTLFQVIKLTAPCAIVALVYIKRLLTSANIDLCP 121
Query: 210 ANWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSS 269
NWK+IVLG +LLASKVW + +W+VD Q KD VE+M+++E+ FLELL+FNI+V +S
Sbjct: 122 TNWKKIVLGTMLLASKVWRNHGLWSVDDSQNSKDTAVENMSKMEKCFLELLEFNIHVSAS 181
Query: 270 VYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLE 303
VYAKYYFDL +LA ++L F L +++A KLE
Sbjct: 182 VYAKYYFDLCALANDHDLYFLFSFLHKDKAQKLE 215
>gi|239745552 PREDICTED: cyclin Y-like 3 [Homo sapiens]
Length = 351
Score = 207 bits (526), Expect = 1e-53
Identities = 109/214 (50%), Positives = 148/214 (69%), Gaps = 14/214 (6%)
Query: 90 PPGQIARKYSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENL 149
PP + RKY SCSTI LD+ST SQP+L++T++ A NR L IF+E +
Sbjct: 16 PPWHLDRKYGSCSTILLDNSTASQPDLRHTLERYA--------NRS------LAIFEEPV 61
Query: 150 HPLSKSEVPPDYDKHNPEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICP 209
HPL + ++P KH+P++ I+R TLF +LTA CAIV LVY++RLLT A ID+CP
Sbjct: 62 HPLPQEKLPGKSFKHDPKRNCIFRHFCTLFQVIKLTAPCAIVALVYIKRLLTSANIDLCP 121
Query: 210 ANWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSS 269
NWK+IVLG +LLASKVW + +W+VD Q KD VE+M+++E+ FLELL+FNI+V +S
Sbjct: 122 TNWKKIVLGTMLLASKVWRNHGLWSVDDSQNSKDTAVENMSKMEKCFLELLEFNIHVSAS 181
Query: 270 VYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLE 303
VYAKYYFDL +LA ++L F L +++A KLE
Sbjct: 182 VYAKYYFDLCALANDHDLYFLFSFLHKDKAQKLE 215
>gi|221136914 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 5 [Homo sapiens]
Length = 686
Score = 92.4 bits (228), Expect = 5e-19
Identities = 55/103 (53%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 55 MEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQP 114
+EFNPS +P ASTIF SQTDV E R+S NH + +++YSSCSTIFLDDST SQ
Sbjct: 99 LEFNPSANPEASTIFQRNSQTDVVEIRRSNCTNHVSTERFSQQYSSCSTIFLDDSTASQH 158
Query: 115 NLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEV 157
L TI V L I +HI RD D L I DE LH + S V
Sbjct: 159 YLTMTIISVTLEIPHHITQRDAD--RSLSIPDEQLHSFAVSTV 199
>gi|156104893 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 4 [Homo sapiens]
Length = 663
Score = 92.4 bits (228), Expect = 5e-19
Identities = 58/118 (49%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 40 NLQHISDRENIDDLNMEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYS 99
++ H+ DRE + L EFNPS +P ASTIF SQTDV E R+S NH + +++YS
Sbjct: 63 HMHHVRDREMPEAL--EFNPSANPEASTIFQRNSQTDVVEIRRSNCTNHVSTVRFSQQYS 120
Query: 100 SCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEV 157
CSTIFLDDST Q L TI V L I +HI RD D L I DE LH + S V
Sbjct: 121 LCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDAD--RSLSIPDEQLHSFAVSTV 176
>gi|117956371 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 8 [Homo sapiens]
Length = 663
Score = 92.4 bits (228), Expect = 5e-19
Identities = 58/118 (49%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 40 NLQHISDRENIDDLNMEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYS 99
++ H+ DRE + L EFNPS +P ASTIF SQTDV E R+S NH + +++YS
Sbjct: 63 HMHHVRDREMPEAL--EFNPSANPEASTIFQRNSQTDVVEIRRSNCTNHVSTVRFSQQYS 120
Query: 100 SCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEV 157
CSTIFLDDST Q L TI V L I +HI RD D L I DE LH + S V
Sbjct: 121 LCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDAD--RSLSIPDEQLHSFAVSTV 176
>gi|117956373 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 7 [Homo sapiens]
Length = 663
Score = 92.0 bits (227), Expect = 7e-19
Identities = 58/118 (49%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
Query: 40 NLQHISDRENIDDLNMEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYS 99
++ H+ DRE + L EFNPS +P ASTIF SQTDV E R+S NH +++YS
Sbjct: 63 HMHHVRDREMPEAL--EFNPSANPEASTIFQRNSQTDVVEIRRSNCTNHVSTVHFSQQYS 120
Query: 100 SCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEV 157
CSTIFLDDST Q L TI V L I +HI RD D L I DE LH + S V
Sbjct: 121 LCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDAD--RSLSIPDEQLHSFAVSTV 176
>gi|166851846 centaurin, gamma-like family, member 3 [Homo sapiens]
Length = 686
Score = 87.8 bits (216), Expect = 1e-17
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 55 MEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQP 114
+EFNPS +P ASTIF SQTDV E R+S NH + +++YS CSTIFLDDST Q
Sbjct: 99 LEFNPSANPEASTIFQRNSQTDVVEIRRSNCTNHVSAVRFSQQYSLCSTIFLDDSTAIQH 158
Query: 115 NLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEV 157
L TI V L I +HI RD D L I DE LH + S V
Sbjct: 159 YLTMTIISVTLEIPHHITQRDAD--RTLSIPDEQLHSFAVSTV 199
>gi|239744074 PREDICTED: ArfGAP with GTPase domain, ankyrin repeat
and PH domain 9 [Homo sapiens]
Length = 684
Score = 87.0 bits (214), Expect = 2e-17
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 55 MEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQP 114
+EFN S +P ASTIF SQTDV E R+S NH + +++YSSCSTIFLDDST Q
Sbjct: 99 LEFNSSANPEASTIFQRNSQTDVVEIRRSNCTNHVSTERFSQQYSSCSTIFLDDSTAIQH 158
Query: 115 NLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEV 157
L TI V L I +HI RD D L I DE LH + S V
Sbjct: 159 YLTMTIISVTLEIPHHITQRDAD--RSLSIPDEQLHSFAVSTV 199
>gi|239744064 PREDICTED: ArfGAP with GTPase domain, ankyrin repeat
and PH domain 10 [Homo sapiens]
Length = 684
Score = 87.0 bits (214), Expect = 2e-17
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 55 MEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQP 114
+EFN S +P ASTIF SQTDV E R+S NH + +++YSSCSTIFLDDST Q
Sbjct: 99 LEFNSSANPEASTIFQRNSQTDVVEIRRSNCTNHVSTERFSQQYSSCSTIFLDDSTAIQH 158
Query: 115 NLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEV 157
L TI V L I +HI RD D L I DE LH + S V
Sbjct: 159 YLTMTIISVTLEIPHHITQRDAD--RSLSIPDEQLHSFAVSTV 199
>gi|169177621 PREDICTED: similar to hCG1647409 [Homo sapiens]
Length = 150
Score = 72.4 bits (176), Expect = 5e-13
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 20/148 (13%)
Query: 194 VYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELE 253
+Y+ERL +YA+IDICP +K+ +D V ++ C + EL
Sbjct: 23 IYIERLESYADIDICP--------------TKLEEDCLVTHLSCCGAMTMRL-----ELG 63
Query: 254 RQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDKY 313
QF + +++VP SVY K YFDL +LA ++L P L ERA +L+ +SRL EDK
Sbjct: 64 NQFSHFINNDVDVPGSVYTKCYFDLCALAHDSSLYLPFCLLDIERAWELKVVSRL-EDKD 122
Query: 314 KDLRRSARKRSASADNLTLPRWSPAIIS 341
+ RKRS S+D+L + AI+S
Sbjct: 123 FYGTANKRKRSLSSDDLIDLQCLKAILS 150
>gi|169179067 PREDICTED: similar to hCG1647409 [Homo sapiens]
Length = 150
Score = 72.4 bits (176), Expect = 5e-13
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 20/148 (13%)
Query: 194 VYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELE 253
+Y+ERL +YA+IDICP +K+ +D V ++ C + EL
Sbjct: 23 IYIERLESYADIDICP--------------TKLEEDCLVTHLSCCGAMTMRL-----ELG 63
Query: 254 RQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDKY 313
QF + +++VP SVY K YFDL +LA ++L P L ERA +L+ +SRL EDK
Sbjct: 64 NQFSHFINNDVDVPGSVYTKCYFDLCALAHDSSLYLPFCLLDIERAWELKVVSRL-EDKD 122
Query: 314 KDLRRSARKRSASADNLTLPRWSPAIIS 341
+ RKRS S+D+L + AI+S
Sbjct: 123 FYGTANKRKRSLSSDDLIDLQCLKAILS 150
>gi|169181261 PREDICTED: hypothetical protein LOC100132781 [Homo
sapiens]
Length = 150
Score = 72.4 bits (176), Expect = 5e-13
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 20/148 (13%)
Query: 194 VYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELE 253
+Y+ERL +YA+IDICP +K+ +D V ++ C + EL
Sbjct: 23 IYIERLESYADIDICP--------------TKLEEDCLVTHLSCCGAMTMRL-----ELG 63
Query: 254 RQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDKY 313
QF + +++VP SVY K YFDL +LA ++L P L ERA +L+ +SRL EDK
Sbjct: 64 NQFSHFINNDVDVPGSVYTKCYFDLCALAHDSSLYLPFCLLDIERAWELKVVSRL-EDKD 122
Query: 314 KDLRRSARKRSASADNLTLPRWSPAIIS 341
+ RKRS S+D+L + AI+S
Sbjct: 123 FYGTANKRKRSLSSDDLIDLQCLKAILS 150
>gi|238550159 estrogen-related receptor beta [Homo sapiens]
Length = 508
Score = 33.5 bits (75), Expect = 0.28
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 204 EIDICPANWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFN 263
++ + + W I++ I+ S +DD+ V+ DY + + + EL R L+L++
Sbjct: 272 QMSLLQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRY 331
Query: 264 INVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDKYKDLRRSARKR 323
+ V + + L++LA AN+ S +E L E KL+ + Y+ +R
Sbjct: 332 KKL--KVEKEEFVTLKALALANSDSMYIEDL--EAVQKLQDLLHEALQDYELSQRHEEPW 387
Query: 324 SASADNLTLP 333
LTLP
Sbjct: 388 RTGKLLLTLP 397
>gi|41393547 neuroblastoma-amplified protein [Homo sapiens]
Length = 2371
Score = 31.6 bits (70), Expect = 1.1
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 116 LKYTIKCVALAIYYHIKNRDPDGRMLL----DIFDENLHPLSKSEVPPDYDKHNPEQKQI 171
L+Y +K L I DGR L DI + LS + P +K E K+
Sbjct: 603 LQYGLKGTDLEALLAIGKGADDGRFTLPGEIDIDSISYEELSPPDEEPAKNKKEKELKKR 662
Query: 172 YRFVRTLFSAAQLTAE------CAIVTLVYLERLLTYAEI 205
++ L + ++LT E C L YL+RL TY EI
Sbjct: 663 QELLK-LVNFSKLTLEQKELCRCRRKLLTYLDRLATYEEI 701
>gi|5174615 COX4 neighbor isoform 1 [Homo sapiens]
Length = 210
Score = 30.0 bits (66), Expect = 3.1
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 91 PGQIARKYSS-CSTIFLDDSTVSQPNLKYTIKCVA--LAIYYHIKNR 134
P Q+A K +S + F D + + N K+T+ CVA + +Y H +NR
Sbjct: 104 PNQVAEKVASRIAEGFSDTALIMVDNTKFTMDCVAPTIHVYEHHENR 150
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 29.6 bits (65), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 2 GNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGC 39
G T V + P RR A R ES+R D + R GC
Sbjct: 129 GKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGC 166
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 29.6 bits (65), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 2 GNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGC 39
G T V + P RR A R ES+R D + R GC
Sbjct: 129 GKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGC 166
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 29.6 bits (65), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 2 GNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGC 39
G T V + P RR A R ES+R D + R GC
Sbjct: 129 GKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGC 166
>gi|14149669 mitogen-activated protein kinase kinase kinase 7
interacting protein 2 [Homo sapiens]
Length = 693
Score = 29.6 bits (65), Expect = 4.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 85 FINHHPPGQIARKYSSCSTIFLDDSTVSQPNLKYTIK 121
FI+HHPP A +S ++ + V+QPN KYT K
Sbjct: 432 FIHHHPPKSRAIGNNSATSPRV---VVTQPNTKYTFK 465
>gi|117647226 RNA (guanine-9-) methyltransferase domain containing 1
[Homo sapiens]
Length = 403
Score = 28.5 bits (62), Expect = 9.1
Identities = 14/63 (22%), Positives = 28/63 (44%)
Query: 253 ERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDK 312
E + L++ N Y KY + + +A + ++ +RE A ++ + EDK
Sbjct: 114 EEELKTLMECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAAAREEAKNIKLLETTEEDK 173
Query: 313 YKD 315
K+
Sbjct: 174 QKN 176
>gi|12383066 axotrophin [Homo sapiens]
Length = 704
Score = 28.5 bits (62), Expect = 9.1
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 4 TTSCCVSSSP---------KLRRNAHSRLESYRPDTDLSREDTGCNLQHISDRENIDD-- 52
+TS S+SP ++ + A SR ++ + D D R C S N+ +
Sbjct: 52 STSASASASPFQSAWYSESEITQGARSRSQNQQRDHDSKRPKLSCTNCTTSAGRNVGNGL 111
Query: 53 ---LNMEFNPSDHPRASTIFLSKSQTDVREKRKSL 84
+ + S PR+S++ L TD+ +R+ L
Sbjct: 112 NTLSDSSWRHSQVPRSSSMVLGSFGTDLMRERRDL 146
>gi|46852398 biogenesis of lysosome-related organelles complex-1,
subunit 2 isoform 1 [Homo sapiens]
Length = 142
Score = 28.5 bits (62), Expect = 9.1
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 246 VEDMNELER-QFLELLQFNINVPSSV--YAKYYFDLRSLAEANNLSFPLEPLSRERAHKL 302
+E+MN+L ++LE+ IN+ ++ + Y L+ + N+ + A+KL
Sbjct: 66 LENMNKLTSLKYLEMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKL 125
Query: 303 EAISRLCEDKYKDLRR 318
+A S+ E KYK L +
Sbjct: 126 DAYSKKLEAKYKKLEK 141
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,176,132
Number of Sequences: 37866
Number of extensions: 552223
Number of successful extensions: 1383
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1331
Number of HSP's gapped (non-prelim): 40
length of query: 341
length of database: 18,247,518
effective HSP length: 103
effective length of query: 238
effective length of database: 14,347,320
effective search space: 3414662160
effective search space used: 3414662160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.