Guide to the Human Genome
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Name: CCNYL2 Sequence: fasta or formatted (362aa) NCBI GI: 239744040
Description:

PREDICTED: cyclin Y-like 2

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt mRNA [362aa] PREDICTED: cyclin Y-like 2
alt mRNA [362aa] PREDICTED: cyclin Y-like 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         28           3
 C cysteine            3.0         11           2
 D aspartate           5.2         19           2
 E glutamate           7.5         27           2
 F phenylalanine       4.7         17           1
 G glycine             3.6         13           1
 H histidine           3.9         14           2
 I isoleucine          6.4         23           1
 K lysine              6.1         22           4
 L leucine            10.8         39           2
 M methionine          2.2          8           1
 N asparagine          3.6         13           2
 P proline             3.9         14           1
 Q glutamine           3.6         13           2
 R arginine            5.0         18           1
 S serine              7.2         26           2
 T threonine           4.7         17           1
 V valine              5.8         21           1
 W tryptophan          1.1          4           1
 X unknown             0.3          1           1
 Y tyrosine            3.9         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: cyclin Y-like 2 
CCNYL2                1.000   PREDICTED: cyclin Y-like 2 
CCNYL2                1.000   PREDICTED: cyclin Y-like 2 
CCNYL1                0.451   cyclin Y-like 1 isoform 2 
CCNYL1                0.449   cyclin Y-like 1 isoform 1 
CCNY                  0.406   cyclin Y isoform 1 
CCNY                  0.385   cyclin Y isoform 2 
CCNYL3                0.221   PREDICTED: cyclin Y-like 3 
CCNYL3                0.221   PREDICTED: cyclin Y-like 3 
CCNYL3                0.221   PREDICTED: cyclin Y-like 3 
AGAP5                 0.217   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP4                 0.213   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP8                 0.213   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP7                 0.213   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.196   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.196   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP6                 0.190   centaurin, gamma-like family, member 3 
LOC100132781          0.107   PREDICTED: similar to hCG1647409 
LOC100132781          0.107   PREDICTED: similar to hCG1647409 
LOC100132781          0.107   PREDICTED: hypothetical protein LOC100132781 
C22orf43              0.028   hypothetical protein LOC51233 
LOC100130360          0.008   PREDICTED: hypothetical protein 
MAP4                  0.007   microtubule-associated protein 4 isoform 5 
MAP4                  0.007   microtubule-associated protein 4 isoform 2 
LOC100294038          0.006   PREDICTED: similar to centaurin, gamma-like family,...
ZMYM1                 0.006   zinc finger, MYM domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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