Guide to the Human Genome
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Name: COX4NB Sequence: fasta or formatted (210aa) NCBI GI: 5174615
Description:

COX4 neighbor isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {126aa} COX4 neighbor isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         19           1
 C cysteine            3.8          8           1
 D aspartate           7.6         16           2
 E glutamate           5.7         12           1
 F phenylalanine       2.4          5           1
 G glycine             4.3          9           2
 H histidine           6.7         14           2
 I isoleucine          4.3          9           1
 K lysine              5.2         11           1
 L leucine             9.5         20           2
 M methionine          2.4          5           1
 N asparagine          4.3          9           1
 P proline             5.7         12           1
 Q glutamine           2.4          5           1
 R arginine            4.3          9           1
 S serine              4.3          9           1
 T threonine           5.2         11           2
 V valine              7.1         15           1
 W tryptophan          1.9          4           1
 Y tyrosine            3.8          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   COX4 neighbor isoform 1 
COX4NB                0.559   COX4 neighbor isoform 2 
FAM158A               0.340   hypothetical protein LOC51016 
CCNY                  0.012   cyclin Y isoform 1 
CCNY                  0.012   cyclin Y isoform 2 
RASL11B               0.007   RAS-like family 11 member B 
ZNF674                0.007   zinc finger family member 674 isoform 2 
ZNF674                0.007   zinc finger family member 674 isoform 1 
SHC4                  0.005   rai-like protein 
RICS                  0.005   Rho GTPase-activating protein isoform 1 
RICS                  0.005   Rho GTPase-activating protein isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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