Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RG9MTD1 Sequence: fasta or formatted (403aa) NCBI GI: 117647226
Description:

RNA (guanine-9-) methyltransferase domain containing 1

Referenced in:

RNases and RNA Stability
tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         22           3
 C cysteine            1.2          5           1
 D aspartate           4.2         17           1
 E glutamate           8.4         34           3
 F phenylalanine       4.7         19           2
 G glycine             2.7         11           1
 H histidine           2.0          8           1
 I isoleucine          4.5         18           2
 K lysine             11.2         45           3
 L leucine            11.2         45           3
 M methionine          3.7         15           1
 N asparagine          5.2         21           2
 P proline             3.7         15           2
 Q glutamine           4.2         17           1
 R arginine            5.5         22           2
 S serine              6.0         24           3
 T threonine           6.5         26           2
 V valine              4.7         19           1
 W tryptophan          2.0          8           1
 Y tyrosine            3.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA (guanine-9-) methyltransferase domain containin... 
RG9MTD3               0.090   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD2               0.060   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD2               0.060   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD2               0.060   RNA (guanine-9-) methyltransferase domain containing...
BAZ2B                 0.015   bromodomain adjacent to zinc finger domain, 2B [Homo...
RTF1                  0.015   Paf1/RNA polymerase II complex component 
BRD3                  0.013   bromodomain containing protein 3 
AFF4                  0.013   ALL1 fused gene from 5q31 
AKAP9                 0.011   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.011   A-kinase anchor protein 9 isoform 3 
BPTF                  0.011   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.011   bromodomain PHD finger transcription factor isoform ...
CCDC112               0.011   coiled-coil domain containing 112 isoform 1 
CCDC112               0.011   coiled-coil domain containing 112 isoform 2 
EIF3CL                0.011   eukaryotic translation initiation factor 3, subunit...
CAGE1                 0.010   cancer antigen 1 
RASSF8                0.010   Ras association (RalGDS/AF-6) domain family (N-termi...
MAP1A                 0.009   microtubule-associated protein 1A 
ZCCHC7                0.009   zinc finger, CCHC domain containing 7 
PPP1R9A               0.009   protein phosphatase 1, regulatory (inhibitor) subuni...
ITSN2                 0.009   intersectin 2 isoform 3 
RAI14                 0.009   retinoic acid induced 14 isoform d 
RAI14                 0.009   retinoic acid induced 14 isoform c 
RAI14                 0.009   retinoic acid induced 14 isoform b 
RAI14                 0.009   retinoic acid induced 14 isoform a 
RAI14                 0.009   retinoic acid induced 14 isoform a 
RAI14                 0.009   retinoic acid induced 14 isoform a 
C12orf56              0.009   hypothetical protein LOC115749 
CCDC6                 0.009   coiled-coil domain containing 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press