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Search of human proteins with 32130536
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32130536 CKLF-like MARVEL transmembrane domain containing 8
[Homo sapiens]
(173 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [... 351 2e-97
gi|7705755 plasmolipin [Homo sapiens] 127 5e-30
gi|4505091 T-lymphocyte maturation-associated protein isoform a ... 78 4e-15
gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens] 72 3e-13
gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo ... 67 6e-12
gi|16418397 MAL2 proteolipid protein [Homo sapiens] 67 6e-12
gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ... 57 1e-08
gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo ... 57 1e-08
gi|12408661 T-lymphocyte maturation-associated protein isoform b... 52 3e-07
gi|169164947 PREDICTED: similar to mal, T-cell differentiation p... 52 3e-07
gi|169164253 PREDICTED: similar to mal, T-cell differentiation p... 52 3e-07
gi|169163277 PREDICTED: similar to mal, T-cell differentiation p... 52 3e-07
gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo ... 41 5e-04
gi|4505893 proteolipid protein 2 (colonic epithelium-enriched) [... 41 5e-04
gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo ... 38 0.005
gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens] 37 0.009
gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens] 37 0.009
gi|66932929 myeloid-associated differentiation marker [Homo sapi... 35 0.025
gi|66932927 myeloid-associated differentiation marker [Homo sapi... 35 0.025
gi|66932925 myeloid-associated differentiation marker [Homo sapi... 35 0.025
gi|66932923 myeloid-associated differentiation marker [Homo sapi... 35 0.025
gi|19923903 myeloid-associated differentiation marker [Homo sapi... 35 0.025
gi|19923929 CKLF-like MARVEL transmembrane domain containing 7 i... 33 0.12
gi|50979290 olfactory receptor, family 5, subfamily AP, member 2... 31 0.61
gi|34101290 Fas apoptotic inhibitory molecule 2 [Homo sapiens] 28 3.0
gi|223942045 hypothetical protein LOC140873 [Homo sapiens] 28 4.0
gi|13677214 receptor-type protein tyrosine phosphatase O isoform... 27 6.7
gi|4506323 receptor-type protein tyrosine phosphatase O isoform ... 27 6.7
gi|116812591 RER1 retention in endoplasmic reticulum 1 [Homo sap... 27 6.7
gi|39812355 olfactory receptor, family 7, subfamily C, member 1 ... 27 8.8
>gi|32130536 CKLF-like MARVEL transmembrane domain containing 8
[Homo sapiens]
Length = 173
Score = 351 bits (901), Expect = 2e-97
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MEEPQRARSHTVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIA 60
MEEPQRARSHTVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIA
Sbjct: 1 MEEPQRARSHTVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIA 60
Query: 61 GTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYL 120
GTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYL
Sbjct: 61 GTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYL 120
Query: 121 SAAVVDASSVSPERDSHNFNSWAASSFFAFLVTICYAGNTYFSFIAWRSRTIQ 173
SAAVVDASSVSPERDSHNFNSWAASSFFAFLVTICYAGNTYFSFIAWRSRTIQ
Sbjct: 121 SAAVVDASSVSPERDSHNFNSWAASSFFAFLVTICYAGNTYFSFIAWRSRTIQ 173
>gi|7705755 plasmolipin [Homo sapiens]
Length = 182
Score = 127 bits (319), Expect = 5e-30
Identities = 68/159 (42%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
Query: 12 VTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFG 71
V+T SS A+ S S+ D F+R+ G L++ ++VLGLLVW LIA T Y PA+G
Sbjct: 8 VSTRTSSPAQGAEASVSALRPDLGFVRSRLGALMLLQLVLGLLVWALIADTPYHLYPAYG 67
Query: 72 WVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVVDASSV- 130
WVMFVAVF W++T+ +Y+ + ++ VPW V + FN SA VLY++A + +++V
Sbjct: 68 WVMFVAVFLWLVTIVLFNLYLFQLHMKLYMVPWPLVLMIFNISATVLYITAFIACSAAVD 127
Query: 131 -SPERDSHNFNSWAASSFFAFLVTICYAGNTYFSFIAWR 168
+ R + +N AA+SFFA LV I Y + +FS+ AWR
Sbjct: 128 LTSLRGTRPYNQRAAASFFACLVMIAYGVSAFFSYQAWR 166
>gi|4505091 T-lymphocyte maturation-associated protein isoform a
[Homo sapiens]
Length = 153
Score = 77.8 bits (190), Expect = 4e-15
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 24 STSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVL 83
+T S+ TLP L + E + G LVW L+A + GWVMFV+VF +V
Sbjct: 6 ATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVA 65
Query: 84 TVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVVDASSVSPERDSHNFNSW- 142
T +I+YI + + W T+ ++ +A + YLSA+V++A + +D + +
Sbjct: 66 TTTLIILYIIGAHG--GETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYH 123
Query: 143 --AASSFFAFLVTICYAGNTYFSFIAWRS 169
A+ F+++ T+ Y + FS I W+S
Sbjct: 124 ENIAAVVFSYIATLLYVVHAVFSLIRWKS 152
>gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens]
Length = 153
Score = 71.6 bits (174), Expect = 3e-13
Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Query: 39 TLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTR 98
T+P + E++ G LVWT++A T GWVM+V++ +++++ FL+ Y+ Y R
Sbjct: 25 TIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKR 84
Query: 99 IPQVPWTTVGLCFNGSAFVLYLSAAV--VDASSVSPE-RDSHNFNSWAASSFFAFLVTIC 155
W + ++G+ +LY+SAAV V A+ VS + D + +A+SFFAF+ T+
Sbjct: 85 FES--WRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLL 142
Query: 156 Y 156
Y
Sbjct: 143 Y 143
>gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo
sapiens]
Length = 231
Score = 67.4 bits (163), Expect = 6e-12
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 37 LRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTY 96
LR PG + G LVWT++A T GWVM+V++ +++++ FL+ Y+ Y
Sbjct: 101 LRPQPGEEPQTHEIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFY 160
Query: 97 TRIPQVPWTTVGLCFNGSAFVLYLSAAV--VDASSVSPE-RDSHNFNSWAASSFFAFLVT 153
R W + ++G+ +LY+SAAV V A+ VS + D + +A+SFFAF+ T
Sbjct: 161 KRFES--WRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIAT 218
Query: 154 ICY 156
+ Y
Sbjct: 219 LLY 221
>gi|16418397 MAL2 proteolipid protein [Homo sapiens]
Length = 176
Score = 67.4 bits (163), Expect = 6e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 35 EFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITM 94
+ LRT G + EI+ G LVW L+A + GWVMFV+V + ++ FL ++++
Sbjct: 30 DILRTYSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFLGMFLSG 89
Query: 95 TYTRIPQVPWTTVGLCFNGSAFVLYLSAAVVDASSVS-------------PERDSHNFNS 141
+I W + ++ + FV Y A +++A++ S P + +N
Sbjct: 90 MVAQI-DANWNFLDFAYHFTVFVFYFGAFLLEAAATSLHDLHCNTTITGQPLLSDNQYNI 148
Query: 142 WAASSFFAFLVTICYAGNTYFSFIAWR 168
A+S FAF+ T CY + + WR
Sbjct: 149 NVAASIFAFMTTACYGCSLGLALRRWR 175
>gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo
sapiens]
Length = 208
Score = 56.6 bits (135), Expect = 1e-08
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 33 DREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFG--WVMFVAVFYWVLTVFFLII 90
D ++LR G L VA+++L L+ + I T P G + FV+ +V+T LI+
Sbjct: 46 DPDYLRGALGRLKVAQVILALIAFICIE-TIMACSPCEGLYFFEFVSCSAFVVTGVLLIM 104
Query: 91 YITMTYTRIPQVPWTTVGLCFNG-SAFVLYLSAAVVDASSVSPERDSHNFNSWAASSFFA 149
+ + RIPQ+ W L G SAF+ ++++ V+ A +H + A+ F
Sbjct: 105 FSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAAL-------NHRAGAEIAAVIFG 157
Query: 150 FLVTICYAGNTYFSFIAWR 168
FL T YA NT+ + WR
Sbjct: 158 FLATAAYAVNTFLAVQKWR 176
>gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo
sapiens]
Length = 234
Score = 56.6 bits (135), Expect = 1e-08
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 33 DREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFG--WVMFVAVFYWVLTVFFLII 90
D ++LR G L VA+++L L+ + I T P G + FV+ +V+T LI+
Sbjct: 46 DPDYLRGALGRLKVAQVILALIAFICIE-TIMACSPCEGLYFFEFVSCSAFVVTGVLLIM 104
Query: 91 YITMTYTRIPQVPWTTVGLCFNG-SAFVLYLSAAVVDASSVSPERDSHNFNSWAASSFFA 149
+ + RIPQ+ W L G SAF+ ++++ V+ A +H + A+ F
Sbjct: 105 FSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAAL-------NHRAGAEIAAVIFG 157
Query: 150 FLVTICYAGNTYFSFIAWR 168
FL T YA NT+ + WR
Sbjct: 158 FLATAAYAVNTFLAVQKWR 176
>gi|12408661 T-lymphocyte maturation-associated protein isoform b
[Homo sapiens]
Length = 111
Score = 52.0 bits (123), Expect = 3e-07
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 24 STSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVL 83
+T S+ TLP L + E + G LVW L+A + GWVMFV+VF +V
Sbjct: 6 ATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVA 65
Query: 84 TVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAV 124
T +I+YI + + W T L F+ A +LY+ AV
Sbjct: 66 TTTLIILYIIGAHG--GETSWVT--LVFSYIATLLYVVHAV 102
>gi|169164947 PREDICTED: similar to mal, T-cell differentiation
protein-like [Homo sapiens]
Length = 130
Score = 51.6 bits (122), Expect = 3e-07
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 50 VLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGL 109
+ G VW L+A T+ GWVM+V++ +++++ FL+ + W +
Sbjct: 18 IFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSL------FGFESWRVLDS 71
Query: 110 CFNGSAFVLYLSAAV--VDASSVSPERDSHNFNSWAASSFFAFLVTICY 156
++G+ +LY+SAAV V +S +D N+ A+ FFAF+ + Y
Sbjct: 72 LYHGTTGILYMSAAVLQVHVMIMSEAQDLRNYCINTAALFFAFVTMLLY 120
>gi|169164253 PREDICTED: similar to mal, T-cell differentiation
protein-like [Homo sapiens]
Length = 130
Score = 51.6 bits (122), Expect = 3e-07
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 50 VLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGL 109
+ G VW L+A T+ GWVM+V++ +++++ FL+ + W +
Sbjct: 18 IFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSL------FGFESWRVLDS 71
Query: 110 CFNGSAFVLYLSAAV--VDASSVSPERDSHNFNSWAASSFFAFLVTICY 156
++G+ +LY+SAAV V +S +D N+ A+ FFAF+ + Y
Sbjct: 72 LYHGTTGILYMSAAVLQVHVMIMSEAQDLRNYCINTAALFFAFVTMLLY 120
>gi|169163277 PREDICTED: similar to mal, T-cell differentiation
protein-like [Homo sapiens]
Length = 130
Score = 51.6 bits (122), Expect = 3e-07
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 50 VLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGL 109
+ G VW L+A T+ GWVM+V++ +++++ FL+ + W +
Sbjct: 18 IFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSL------FGFESWRVLDS 71
Query: 110 CFNGSAFVLYLSAAV--VDASSVSPERDSHNFNSWAASSFFAFLVTICY 156
++G+ +LY+SAAV V +S +D N+ A+ FFAF+ + Y
Sbjct: 72 LYHGTTGILYMSAAVLQVHVMIMSEAQDLRNYCINTAALFFAFVTMLLY 120
>gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo
sapiens]
Length = 156
Score = 41.2 bits (95), Expect = 5e-04
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 30 FAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLI 89
FA D+ FL + G L+ E+ L L+++ + + A+ M A+ + +T+ FL
Sbjct: 23 FAVDKAFLTSHKGILLETELALTLIIFICFTAS----ISAY---MAAALLEFFITLAFLF 75
Query: 90 IYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVVDASS 129
+Y T Y R ++ W + SA +++L + +S
Sbjct: 76 LYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTS 115
>gi|4505893 proteolipid protein 2 (colonic epithelium-enriched)
[Homo sapiens]
Length = 152
Score = 41.2 bits (95), Expect = 5e-04
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 36 FLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMT 95
F RT G L+ AEI+L L++ + + P + ++V +L F ++Y+
Sbjct: 19 FSRTRKGILLFAEIILCLVILICFSAS----TPGYS---SLSVIEMILAAIFFVVYMCDL 71
Query: 96 YTRIPQVPWTTVGLCFNGSAFVLYLSAAVVDASSVSPERDSHNFNSWAASSFFAFLVTIC 155
+T+IP + W A +LYL ++V V ER +H S + + T
Sbjct: 72 HTKIPFINWPWSDFFRTLIAAILYLITSIV----VLVERGNH---SKIVAGVLGLIATCL 124
Query: 156 YAGNTYFSF 164
+ + Y +F
Sbjct: 125 FGYDAYVTF 133
>gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo
sapiens]
Length = 125
Score = 37.7 bits (86), Expect = 0.005
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 30 FAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLI 89
FA D+ FL + G L+ E+ L L+++ + + A+ M A+ + +T+ FL
Sbjct: 23 FAVDKAFLTSHKGILLETELALTLIIFICFTAS----ISAY---MAAALLEFFITLAFLF 75
Query: 90 IYITMTYTRIPQVPW 104
+Y T Y R ++ W
Sbjct: 76 LYATQYYQRFDRINW 90
>gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens]
Length = 558
Score = 37.0 bits (84), Expect = 0.009
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 61 GTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRI--PQVPWTTVGLCFNGSAFVL 118
G Y+ P +V+ VA W+ T+ L++ ++M Y I W N + F+L
Sbjct: 244 GGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFIL 303
Query: 119 YLSAAVV 125
Y++AA+V
Sbjct: 304 YMAAAIV 310
>gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens]
Length = 457
Score = 37.0 bits (84), Expect = 0.009
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 61 GTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRI--PQVPWTTVGLCFNGSAFVL 118
G Y+ P +V+ VA W+ T+ L++ ++M Y I W N + F+L
Sbjct: 244 GGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFIL 303
Query: 119 YLSAAVV 125
Y++AA+V
Sbjct: 304 YMAAAIV 310
>gi|66932929 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 35.4 bits (80), Expect = 0.025
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Query: 11 TVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAF 70
T TTT+SS S L G L + ++V + ++L+A +
Sbjct: 11 TTTTTSSS-----GLGSPMIVGSPRALTQPLGLLRLLQLVSTCVAFSLVASVGAWTGSMG 65
Query: 71 GWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVV-DASS 129
W MF F + +T+ LI+ + R P + W + F A + LSA+++ +
Sbjct: 66 NWSMFTWCFCFSVTLIILIVELCGLQARFP-LSWRNFPITFACYAALFCLSASIIYPTTY 124
Query: 130 VSPERDSHNFNSWAASSFFAFLVTICYA 157
V + + A++FF+ + + YA
Sbjct: 125 VQFLSHGRSRDHAIAATFFSCIACVAYA 152
>gi|66932927 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 35.4 bits (80), Expect = 0.025
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Query: 11 TVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAF 70
T TTT+SS S L G L + ++V + ++L+A +
Sbjct: 11 TTTTTSSS-----GLGSPMIVGSPRALTQPLGLLRLLQLVSTCVAFSLVASVGAWTGSMG 65
Query: 71 GWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVV-DASS 129
W MF F + +T+ LI+ + R P + W + F A + LSA+++ +
Sbjct: 66 NWSMFTWCFCFSVTLIILIVELCGLQARFP-LSWRNFPITFACYAALFCLSASIIYPTTY 124
Query: 130 VSPERDSHNFNSWAASSFFAFLVTICYA 157
V + + A++FF+ + + YA
Sbjct: 125 VQFLSHGRSRDHAIAATFFSCIACVAYA 152
>gi|66932925 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 35.4 bits (80), Expect = 0.025
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Query: 11 TVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAF 70
T TTT+SS S L G L + ++V + ++L+A +
Sbjct: 11 TTTTTSSS-----GLGSPMIVGSPRALTQPLGLLRLLQLVSTCVAFSLVASVGAWTGSMG 65
Query: 71 GWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVV-DASS 129
W MF F + +T+ LI+ + R P + W + F A + LSA+++ +
Sbjct: 66 NWSMFTWCFCFSVTLIILIVELCGLQARFP-LSWRNFPITFACYAALFCLSASIIYPTTY 124
Query: 130 VSPERDSHNFNSWAASSFFAFLVTICYA 157
V + + A++FF+ + + YA
Sbjct: 125 VQFLSHGRSRDHAIAATFFSCIACVAYA 152
>gi|66932923 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 35.4 bits (80), Expect = 0.025
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Query: 11 TVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAF 70
T TTT+SS S L G L + ++V + ++L+A +
Sbjct: 11 TTTTTSSS-----GLGSPMIVGSPRALTQPLGLLRLLQLVSTCVAFSLVASVGAWTGSMG 65
Query: 71 GWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVV-DASS 129
W MF F + +T+ LI+ + R P + W + F A + LSA+++ +
Sbjct: 66 NWSMFTWCFCFSVTLIILIVELCGLQARFP-LSWRNFPITFACYAALFCLSASIIYPTTY 124
Query: 130 VSPERDSHNFNSWAASSFFAFLVTICYA 157
V + + A++FF+ + + YA
Sbjct: 125 VQFLSHGRSRDHAIAATFFSCIACVAYA 152
>gi|19923903 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 35.4 bits (80), Expect = 0.025
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Query: 11 TVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAF 70
T TTT+SS S L G L + ++V + ++L+A +
Sbjct: 11 TTTTTSSS-----GLGSPMIVGSPRALTQPLGLLRLLQLVSTCVAFSLVASVGAWTGSMG 65
Query: 71 GWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVV-DASS 129
W MF F + +T+ LI+ + R P + W + F A + LSA+++ +
Sbjct: 66 NWSMFTWCFCFSVTLIILIVELCGLQARFP-LSWRNFPITFACYAALFCLSASIIYPTTY 124
Query: 130 VSPERDSHNFNSWAASSFFAFLVTICYA 157
V + + A++FF+ + + YA
Sbjct: 125 VQFLSHGRSRDHAIAATFFSCIACVAYA 152
>gi|19923929 CKLF-like MARVEL transmembrane domain containing 7
isoform a [Homo sapiens]
Length = 175
Score = 33.1 bits (74), Expect = 0.12
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 44 LIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVP 103
L++A I + +WT + YF V V + ++ + F ++++ Y + +
Sbjct: 56 LLIAFICVRSSLWTNYSAYSYFEV--------VTICDLIMILAFYLVHLFRFYRVLTCIS 107
Query: 104 WTTVGLCFNGSAFVLYLSAAVVDASSVSPERDSHNFNSWAASSFFAFLVTICYAGNTYFS 163
W L +L L A++V AS S+N + A + F F+ T + + S
Sbjct: 108 WPLSELLHYLIGTLLLLIASIVAASK------SYNQSGLVAGAIFGFMATFLCMASIWLS 161
Query: 164 F 164
+
Sbjct: 162 Y 162
>gi|50979290 olfactory receptor, family 5, subfamily AP, member 2
[Homo sapiens]
Length = 316
Score = 30.8 bits (68), Expect = 0.61
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 82 VLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVVDA---SSVSP------ 132
VL FL+IY+ + + + LC + + S + VDA SSV+P
Sbjct: 32 VLFALFLLIYMANMVGNLGMIVLIKIDLCLHTPMYFFLSSLSFVDASYSSSVTPKMLVNL 91
Query: 133 --ERDSHNFNSWAASSFF--AFLVTICY 156
E + +F+ AA +F +FL T C+
Sbjct: 92 MAENKAISFHGCAAQFYFFGSFLGTECF 119
>gi|34101290 Fas apoptotic inhibitory molecule 2 [Homo sapiens]
Length = 316
Score = 28.5 bits (62), Expect = 3.0
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 14 TTASSFAENFSTSS----SSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPA 69
+++SS+ F T ++F++D + +R + + +++ LLV + F P
Sbjct: 71 SSSSSYDNGFPTGDHELFTTFSWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDPV 130
Query: 70 FGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQ--VPWTTV 107
+V +YW F Y+T+ P+ PW +
Sbjct: 131 KDYVQANPGWYWASYAVFFATYLTLACCSGPRRHFPWNLI 170
>gi|223942045 hypothetical protein LOC140873 [Homo sapiens]
Length = 202
Score = 28.1 bits (61), Expect = 4.0
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 12/51 (23%)
Query: 72 WVMFVAVFYWVLTVFFLIIYITMTYTRIPQ------------VPWTTVGLC 110
W +FV +WVL ++ + Y+ +T PQ PW + G C
Sbjct: 4 WQIFVLWVFWVLILWLMTPYLDLTPESAPQEKRMYLVPQHCDCPWFSSGKC 54
>gi|13677214 receptor-type protein tyrosine phosphatase O isoform a
precursor [Homo sapiens]
Length = 1216
Score = 27.3 bits (59), Expect = 6.7
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 1 MEEPQRARSHTVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIV 50
++EP SH VT ++ A ++ S +SF++D ++P F+ V+ +V
Sbjct: 767 LQEPVAVSSHVVTISSLLPATAYNCSVTSFSHDSP---SVPTFIAVSTMV 813
>gi|4506323 receptor-type protein tyrosine phosphatase O isoform b
precursor [Homo sapiens]
Length = 1188
Score = 27.3 bits (59), Expect = 6.7
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 1 MEEPQRARSHTVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIV 50
++EP SH VT ++ A ++ S +SF++D ++P F+ V+ +V
Sbjct: 767 LQEPVAVSSHVVTISSLLPATAYNCSVTSFSHDSP---SVPTFIAVSTMV 813
>gi|116812591 RER1 retention in endoplasmic reticulum 1 [Homo
sapiens]
Length = 196
Score = 27.3 bits (59), Expect = 6.7
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Query: 34 REFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIY-I 92
R F+R LP F G+LV + + F VP VF+ +L ++F++++ I
Sbjct: 110 RPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVP---------VFWPILVMYFIMLFCI 160
Query: 93 TM 94
TM
Sbjct: 161 TM 162
>gi|39812355 olfactory receptor, family 7, subfamily C, member 1
[Homo sapiens]
Length = 320
Score = 26.9 bits (58), Expect = 8.8
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 64 YFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVG------LCFNGSAFV 117
YF G + F +F+ + F I+ I+ + ++T G F G+ F
Sbjct: 200 YFATGVLGVISFTGIFFSYYKIVFSILRISSAGRK--HKAFSTCGSHLSVVTLFYGTGFG 257
Query: 118 LYLSAAVVDASSVS 131
+YLS+A +S S
Sbjct: 258 VYLSSAATPSSRTS 271
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,865,135
Number of Sequences: 37866
Number of extensions: 215093
Number of successful extensions: 703
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 672
Number of HSP's gapped (non-prelim): 33
length of query: 173
length of database: 18,247,518
effective HSP length: 95
effective length of query: 78
effective length of database: 14,650,248
effective search space: 1142719344
effective search space used: 1142719344
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.