Guide to the Human Genome
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Name: OR7C1 Sequence: fasta or formatted (320aa) NCBI GI: 39812355
Description:

olfactory receptor, family 7, subfamily C, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         17           2
 C cysteine            3.4         11           1
 D aspartate           2.5          8           1
 E glutamate           2.2          7           1
 F phenylalanine       9.7         31           3
 G glycine             6.2         20           1
 H histidine           2.5          8           1
 I isoleucine          6.2         20           2
 K lysine              2.2          7           1
 L leucine            15.0         48           3
 M methionine          3.8         12           1
 N asparagine          3.8         12           2
 P proline             2.5          8           1
 Q glutamine           1.9          6           1
 R arginine            2.8          9           1
 S serine             10.0         32           2
 T threonine           9.4         30           2
 V valine              6.6         21           2
 W tryptophan          0.3          1           1
 Y tyrosine            3.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 7, subfamily C, member 1 ... 
OR7C2                 0.767   olfactory receptor, family 7, subfamily C, member 2 ...
OR7A5                 0.645   olfactory receptor, family 7, subfamily A, member 5 [...
OR7A10                0.642   olfactory receptor, family 7, subfamily A, member 10...
OR7A17                0.632   olfactory receptor, family 7, subfamily A, member 17...
OR7D2                 0.632   olfactory receptor, family 7, subfamily D, member 2 ...
OR7D4                 0.619   olfactory receptor, family 7, subfamily D, member 4 ...
OR7G3                 0.611   olfactory receptor, family 7, subfamily G, member 3 ...
OR7G2                 0.585   olfactory receptor, family 7, subfamily G, member 2 ...
OR7E24                0.581   olfactory receptor, family 7, subfamily E, member 2...
OR7G1                 0.570   olfactory receptor, family 7, subfamily G, member 1 ...
OR1N2                 0.510   olfactory receptor, family 1, subfamily N, member 2 ...
OR1E1                 0.510   olfactory receptor, family 1, subfamily E, member 1...
OR1G1                 0.508   olfactory receptor, family 1, subfamily G, member 1 ...
OR1J2                 0.508   olfactory receptor, family 1, subfamily J, member 2 ...
OR1N1                 0.500   olfactory receptor, family 1, subfamily N, member 1 ...
OR1M1                 0.495   olfactory receptor, family 1, subfamily M, member 1 ...
OR1D2                 0.495   olfactory receptor, family 1, subfamily D, member 2 [...
OR1C1                 0.493   olfactory receptor, family 1, subfamily C, member 1...
OR1S1                 0.487   olfactory receptor, family 1, subfamily S, member 1 ...
OR1J4                 0.485   olfactory receptor, family 1, subfamily J, member 4 ...
OR1F1                 0.485   olfactory receptor, family 1, subfamily F, member 1 [...
OR1E2                 0.482   olfactory receptor, family 1, subfamily E, member 2 ...
OR1L4                 0.480   olfactory receptor, family 1, subfamily L, member 4 ...
OR1J1                 0.479   olfactory receptor, family 1, subfamily J, member 1 ...
OR1D4                 0.476   olfactory receptor, family 1, subfamily D, member 4...
OR1L6                 0.472   olfactory receptor, family 1, subfamily L, member 6 ...
OR1D5                 0.467   olfactory receptor, family 1, subfamily D, member 5 [...
OR1I1                 0.459   olfactory receptor, family 1, subfamily I, member 1 ...
OR1S2                 0.458   olfactory receptor, family 1, subfamily S, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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