Guide to the Human Genome
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Name: SARNP Sequence: fasta or formatted (210aa) NCBI GI: 32129199
Description:

cytokine induced protein 29 kDa

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         18           2
 C cysteine            0.5          1           1
 D aspartate           4.3          9           2
 E glutamate          16.2         34           4
 F phenylalanine       2.4          5           1
 G glycine             4.8         10           1
 H histidine           1.4          3           1
 I isoleucine          4.3          9           1
 K lysine             12.4         26           2
 L leucine             8.1         17           1
 M methionine          1.4          3           1
 N asparagine          2.4          5           1
 P proline             3.8          8           2
 Q glutamine           2.9          6           1
 R arginine            7.1         15           1
 S serine              6.2         13           2
 T threonine           6.7         14           2
 V valine              6.2         13           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytokine induced protein 29 kDa 
HNRNPUL2              0.066   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
HNRNPUL1              0.055   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
CCAR1                 0.050   cell-cycle and apoptosis regulatory protein 1 
CCDC146               0.047   coiled-coil domain containing 146 
HNRNPU                0.045   heterogeneous nuclear ribonucleoprotein U isoform b ...
HNRNPU                0.045   heterogeneous nuclear ribonucleoprotein U isoform a ...
TTN                   0.042   titin isoform N2-A 
CLSPN                 0.039   claspin 
MYST4                 0.039   MYST histone acetyltransferase (monocytic leukemia)...
SCN2A                 0.037   sodium channel, voltage-gated, type II, alpha isofor...
SCN2A                 0.037   sodium channel, voltage-gated, type II, alpha isofor...
SCN2A                 0.037   sodium channel, voltage-gated, type II, alpha isofor...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
EHBP1                 0.034   EH domain binding protein 1 isoform 2 
EHBP1                 0.034   EH domain binding protein 1 isoform 1 
NAP1L3                0.032   nucleosome assembly protein 1-like 3 
CDC2L2                0.032   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.032   cell division cycle 2-like 2 isoform 1 
SLTM                  0.032   modulator of estrogen induced transcription isoform ...
SLTM                  0.032   modulator of estrogen induced transcription isoform ...
MKL1                  0.032   megakaryoblastic leukemia 1 protein 
MKL2                  0.032   megakaryoblastic leukemia 2 protein 
NPM2                  0.032   nucleoplasmin 2 
C6orf97               0.029   hypothetical protein LOC80129 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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