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Search of human proteins with 31543657
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31543657 StAR-related lipid transfer (START) domain
containing 3 [Homo sapiens]
(445 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31543657 StAR-related lipid transfer (START) domain containin... 882 0.0
gi|14042927 MLN64 N-terminal homolog [Homo sapiens] 254 1e-67
gi|56243551 steroidogenic acute regulatory protein isoform 1 [Ho... 147 1e-35
gi|56117848 steroidogenic acute regulatory protein isoform 2 [Ho... 123 3e-28
gi|21040261 START domain containing protein 6 [Homo sapiens] 78 1e-14
gi|21040247 StAR-related lipid transfer (START) domain containin... 69 9e-12
gi|32526915 StAR-related lipid transfer protein 5 [Homo sapiens] 69 1e-11
gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo... 41 0.003
gi|116812600 START domain containing 10 [Homo sapiens] 40 0.003
gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo... 36 0.081
gi|116235474 LKB1 interacting protein [Homo sapiens] 31 2.0
gi|38570105 Ras-interacting protein 1 [Homo sapiens] 30 3.4
gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens] 30 3.4
gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Ho... 30 5.8
gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Ho... 30 5.8
gi|91208420 bassoon protein [Homo sapiens] 30 5.8
gi|181337167 solute carrier family 7 (cationic amino acid transp... 30 5.8
gi|40549422 Theg homolog isoform 2 [Homo sapiens] 29 7.5
gi|7706121 Theg homolog isoform 1 [Homo sapiens] 29 7.5
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma... 29 9.9
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma... 29 9.9
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma... 29 9.9
gi|58219008 RAD26L hypothetical protein [Homo sapiens] 29 9.9
>gi|31543657 StAR-related lipid transfer (START) domain containing 3
[Homo sapiens]
Length = 445
Score = 882 bits (2280), Expect = 0.0
Identities = 445/445 (100%), Positives = 445/445 (100%)
Query: 1 MSKLPRELTRDLERSLPAVASLGSSLSHSQSLSSHLLPPPEKRRAISDVRRTFCLFVTFD 60
MSKLPRELTRDLERSLPAVASLGSSLSHSQSLSSHLLPPPEKRRAISDVRRTFCLFVTFD
Sbjct: 1 MSKLPRELTRDLERSLPAVASLGSSLSHSQSLSSHLLPPPEKRRAISDVRRTFCLFVTFD 60
Query: 61 LLFISLLWIIELNTNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAVLRLRH 120
LLFISLLWIIELNTNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAVLRLRH
Sbjct: 61 LLFISLLWIIELNTNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAVLRLRH 120
Query: 121 WWVIAVTTLVSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEAEE 180
WWVIAVTTLVSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEAEE
Sbjct: 121 WWVIAVTTLVSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEAEE 180
Query: 181 ERWYLAAQVAVARGPLLFSGALSEGQFYSPPESFAASDNESDEEVAGKKSFSAQEREYIR 240
ERWYLAAQVAVARGPLLFSGALSEGQFYSPPESFAASDNESDEEVAGKKSFSAQEREYIR
Sbjct: 181 ERWYLAAQVAVARGPLLFSGALSEGQFYSPPESFAASDNESDEEVAGKKSFSAQEREYIR 240
Query: 241 QGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEV 300
QGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEV
Sbjct: 241 QGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEV 300
Query: 301 ILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRY 360
ILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRY
Sbjct: 301 ILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRY 360
Query: 361 LSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIH 420
LSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIH
Sbjct: 361 LSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIH 420
Query: 421 QSLAATMFEFAFHLRQRISELGARA 445
QSLAATMFEFAFHLRQRISELGARA
Sbjct: 421 QSLAATMFEFAFHLRQRISELGARA 445
>gi|14042927 MLN64 N-terminal homolog [Homo sapiens]
Length = 234
Score = 254 bits (649), Expect = 1e-67
Identities = 131/232 (56%), Positives = 167/232 (71%), Gaps = 17/232 (7%)
Query: 8 LTRDLERSLPAVASLGSSLSHSQSLSSHLLPPPE-----------KRRAISDVRRTFCLF 56
L D+E +L GS SH+ + H + P + +++ ISDVRRTFCLF
Sbjct: 4 LPEDMENALT-----GSQSSHASLRNIHSINPTQLMARIESYEGREKKGISDVRRTFCLF 58
Query: 57 VTFDLLFISLLWIIELNTNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAVL 116
VTFDLLF++LLWIIELN N GI LE+E++QY++ +S+FDIF+LA FRF L+L YAV
Sbjct: 59 VTFDLLFVTLLWIIELNVNGGIENTLEKEVMQYDYYSSYFDIFLLAVFRFKVLILAYAVC 118
Query: 117 RLRHWWVIAVTTLVSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQ 176
RLRHWW IA+TT V+SAFL+ KVILS+L S+GAFGY+LPI+SF+LAW+ETWFLDFKVLPQ
Sbjct: 119 RLRHWWAIALTTAVTSAFLLAKVILSKLFSQGAFGYVLPIISFILAWIETWFLDFKVLPQ 178
Query: 177 EAEEERWYLAAQVAVARGPLLFSGALSEGQFYSPPESFAASDNESDEEVAGK 228
EAEEE L Q A R L+ G LS+GQFYSPPES A S+ +++ + K
Sbjct: 179 EAEEENRLLIVQDASERAALI-PGGLSDGQFYSPPESEAGSEEAEEKQDSEK 229
>gi|56243551 steroidogenic acute regulatory protein isoform 1 [Homo
sapiens]
Length = 285
Score = 147 bits (372), Expect = 1e-35
Identities = 78/208 (37%), Positives = 123/208 (59%)
Query: 231 FSAQEREYIRQGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLP 290
+S QE Y++QG+EA IL+ +E WK E + GD V + VP GK F L+ +
Sbjct: 68 YSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVD 127
Query: 291 CPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNV 350
P E +Y+E++ + E M WN V ++LQ++ +T I+++++A AAG +V PRDFV+V
Sbjct: 128 QPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSV 187
Query: 351 RRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDL 410
R +RR + +G+AT P +R E+GP ++ A +P W+L+ DL
Sbjct: 188 RCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDL 247
Query: 411 KGRLPRYLIHQSLAATMFEFAFHLRQRI 438
KG LP+ +I+Q L+ T +FA HLR+R+
Sbjct: 248 KGWLPKSIINQVLSQTQVDFANHLRKRL 275
>gi|56117848 steroidogenic acute regulatory protein isoform 2 [Homo
sapiens]
Length = 267
Score = 123 bits (309), Expect = 3e-28
Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 18/208 (8%)
Query: 231 FSAQEREYIRQGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLP 290
+S QE Y++QG+EA IL+ +E WK E + GD V + VP GK F L+ +
Sbjct: 68 YSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVD 127
Query: 291 CPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNV 350
P E +Y+E++ + E M WN V ++LQ++ GG PRDFV+V
Sbjct: 128 QPMERLYEELVERMEAMGEWNPNVKEIKVLQKI---------------GG---PRDFVSV 169
Query: 351 RRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDL 410
R +RR + +G+AT P +R E+GP ++ A +P W+L+ DL
Sbjct: 170 RCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDL 229
Query: 411 KGRLPRYLIHQSLAATMFEFAFHLRQRI 438
KG LP+ +I+Q L+ T +FA HLR+R+
Sbjct: 230 KGWLPKSIINQVLSQTQVDFANHLRKRL 257
>gi|21040261 START domain containing protein 6 [Homo sapiens]
Length = 220
Score = 78.2 bits (191), Expect = 1e-14
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Query: 259 WKFEKNNEYGDTVYTIEVPFHGKTFILKTFLP-CPAELVYQEVILQPERMVLWNKTVTAC 317
WK K ++ FHG + ++ +P PA+L + + Q + W+K++
Sbjct: 24 WKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAKL--SDFLYQTGDRITWDKSLQVY 81
Query: 318 QILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRY-LSSGIATSHSAKPPTH 376
++ R++ +T I + ++ A G +SPRDF+++ I+R + S + PP+
Sbjct: 82 NMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRYEGNMNIISSKSVDFPEYPPSS 141
Query: 377 KYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLRQ 436
Y+RG N P GF+ NP V + T+++G+L +I +++ + + F + +
Sbjct: 142 NYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLSPSIIEKTMPSNLVNFILNAKD 201
Query: 437 RI 438
I
Sbjct: 202 GI 203
>gi|21040247 StAR-related lipid transfer (START) domain containing 4
[Homo sapiens]
Length = 205
Score = 68.9 bits (167), Expect = 9e-12
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 310 WNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSH 369
W+ +T+ IL+ E+N + +AG ++SPR+FV+ ++ LS GI+
Sbjct: 79 WDSLMTSLDILENFEENCCVMRYTTAGQLWNIISPREFVDFSYTVGYKEGLLSCGISLDW 138
Query: 370 SAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFE 429
K P ++VRG N P G+ + NP + TDL+G +P+ + ++A+T+
Sbjct: 139 DEKRP--EFVRGYNHPCGWFCVPLKDNPNQSLLTGYIQTDLRGMIPQSAVDTAMASTLTN 196
Query: 430 FAFHLRQRI 438
F LR+ +
Sbjct: 197 FYGDLRKAL 205
>gi|32526915 StAR-related lipid transfer protein 5 [Homo sapiens]
Length = 213
Score = 68.6 bits (166), Expect = 1e-11
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 308 VLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIA- 366
V W++ VT +I+Q + D +S + AA ++SPRDFV++ ++R D +SS
Sbjct: 77 VKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATH 136
Query: 367 TSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAAT 426
H PP +VRG N P G P V +TDL G LP+ ++ +
Sbjct: 137 VEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSFFPRS 196
Query: 427 MFEFAFHLRQRISE 440
M F +L++ + +
Sbjct: 197 MTRFYANLQKAVKQ 210
>gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo
sapiens]
Length = 607
Score = 40.8 bits (94), Expect = 0.003
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 251 QILAQEENWKFEKNNEYGDT-VYTIE----VPFHGKTFILKTFLPCPAELVYQEVILQPE 305
++L ++NW ++E +YT+E + FH + + A L+ ++ +PE
Sbjct: 396 KMLVAKDNWVL--SSEISQVRLYTLEDDKFLSFHMEMVVHVD--AAQAFLLLSDLRQRPE 451
Query: 306 RMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSG- 364
W+K + +++Q+V+++ I Y V++ A GG P+DFV I R + +G
Sbjct: 452 ----WDKHYRSVELVQQVDEDDAI-YHVTSPALGGHTKPQDFV----ILASRRKPCDNGD 502
Query: 365 --IATSHSAKPPTHK----YVRGENGPGGFIVLKSASNPRVCTFVWILNTDL 410
+ S PTH+ Y RGE GF + + C +V + T+L
Sbjct: 503 PYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLTKCCWVRVSLTEL 554
>gi|116812600 START domain containing 10 [Homo sapiens]
Length = 291
Score = 40.4 bits (93), Expect = 0.003
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 292 PAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVR 351
PAE +Y +V+ E W+ V + R+ N + Y + + RD + +R
Sbjct: 78 PAETLY-DVLHDIEYRKKWDSNVIETFDIARLTVNADVGY--YSWRCPKPLKNRDVITLR 134
Query: 352 RIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLK 411
Y+ + H PP VR + G+++ ++ P+ C ++ D K
Sbjct: 135 SWLPMGADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLI--QSTGPKSCVITYLAQVDPK 192
Query: 412 GRLPRYLIHQS 422
G LP++++++S
Sbjct: 193 GSLPKWVVNKS 203
>gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo
sapiens]
Length = 594
Score = 35.8 bits (81), Expect = 0.081
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 251 QILAQEENWKFEKNNEYGDT-VYTIE----VPFHGKTFILKTFLPCPAELVYQEVILQPE 305
++L ++NW ++E +YT+E + FH + + A L+ ++ +PE
Sbjct: 396 KMLVAKDNWVL--SSEISQVRLYTLEDDKFLSFHMEMVVHVD--AAQAFLLLSDLRQRPE 451
Query: 306 RMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSG- 364
W+K + +++Q+V+++ I Y V++ A GG P+DFV I R + +G
Sbjct: 452 ----WDKHYRSVELVQQVDEDDAI-YHVTSPALGGHTKPQDFV----ILASRRKPCDNGD 502
Query: 365 --IATSHSAKPPTHK----YVRGENGPGGF 388
+ S PTH+ Y RGE GF
Sbjct: 503 PYVIALRSVTLPTHRETPEYRRGETLCSGF 532
>gi|116235474 LKB1 interacting protein [Homo sapiens]
Length = 1099
Score = 31.2 bits (69), Expect = 2.0
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 209 SPPESFAASDNESDEEVAGKKSFSAQEREYIRQGKEATAVVDQILAQEENWKFEKNNEYG 268
SPP+ A ES ++++ + QE E ++GKE + + EE E+ E
Sbjct: 481 SPPQEEARGPQESPQKMSEEVRAEPQEEEEEKEGKEEKEEGEMVEQGEEEAGEEEEEEQD 540
Query: 269 DTVYTIEVPFHGKTFILKTFLPCPAE----LVYQEVILQPERMVLWNKTVTACQILQRVE 324
E + + L CP E + +E L+ L+ + A + L+R+E
Sbjct: 541 QKEVEAE--------LCRPLLVCPLEGPEGVRGRECFLRVTSAHLFEVELQAARTLERLE 592
Query: 325 DNTLISYDVSAGA 337
+L + ++ A
Sbjct: 593 LQSLEAAEIEPEA 605
>gi|38570105 Ras-interacting protein 1 [Homo sapiens]
Length = 963
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 5 PRELTRDLERSLPAVASLGSSLSHSQSLSSHLLPPP 40
PR+ L R P+ AS+ SS S + S SS LPPP
Sbjct: 28 PRKQLAKLGRRWPSAASVKSSSSDTGSRSSEPLPPP 63
>gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens]
Length = 1379
Score = 30.4 bits (67), Expect = 3.4
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 236 REYIRQGKEATAVVDQILAQEENW-KFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAE 294
R R+ KE T V + EN K E + D+V I P H +T + T+ P
Sbjct: 503 RSEARESKEVTTSVAENRNLLENADKIESTSARADSVLNIPAPLHPETTVNMTYQPTTPS 562
Query: 295 LVYQEV 300
+Q+V
Sbjct: 563 SSFQDV 568
>gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Homo
sapiens]
Length = 492
Score = 29.6 bits (65), Expect = 5.8
Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 28/173 (16%)
Query: 22 LGSSLSHSQSLSSHLLPPPEKRRAISDVR--RTFCLFVTFDLLFISLL------WIIELN 73
L +L + L H+L K RA R R F LL +S++ +I++ N
Sbjct: 124 LDMALQNKNQLIIHMLKTEAKMRANQKFRLWRWLQKCELFLLLMLSVITMWAIGYILDFN 183
Query: 74 TNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRF----SGLLLGYAVLRLRHWWVIAVTTL 129
+++ + K ++ F TS F F++ + + LL W+++ L
Sbjct: 184 SDSWLLKGCL--LVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMTWFILFFPDL 241
Query: 130 VSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEAEEER 182
+ F F ++ IV+F+ + +TW D EE++
Sbjct: 242 AGAPFY--------------FSFIFSIVAFLYFFYKTWATDPGFTKASEEEKK 280
>gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Homo
sapiens]
Length = 622
Score = 29.6 bits (65), Expect = 5.8
Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 28/173 (16%)
Query: 22 LGSSLSHSQSLSSHLLPPPEKRRAISDVR--RTFCLFVTFDLLFISLL------WIIELN 73
L +L + L H+L K RA R R F LL +S++ +I++ N
Sbjct: 254 LDMALQNKNQLIIHMLKTEAKMRANQKFRLWRWLQKCELFLLLMLSVITMWAIGYILDFN 313
Query: 74 TNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRF----SGLLLGYAVLRLRHWWVIAVTTL 129
+++ + K ++ F TS F F++ + + LL W+++ L
Sbjct: 314 SDSWLLKGCL--LVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMTWFILFFPDL 371
Query: 130 VSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEAEEER 182
+ F F ++ IV+F+ + +TW D EE++
Sbjct: 372 AGAPFY--------------FSFIFSIVAFLYFFYKTWATDPGFTKASEEEKK 410
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 29.6 bits (65), Expect = 5.8
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Query: 174 LPQEAEEERW-----YLAAQVAVARGPLLFSGALSEGQFYSPPESFAASDNESDEEVAGK 228
L Q+ EE++ + AA A RGP L + L++ Y PP + AA + E G
Sbjct: 2462 LQQQLEEQKQRQKAPFPAACEAPGRGPPLAAAELAQNGQYWPPLTHAAFIAMAGPEGLG- 2520
Query: 229 KSFSAQEREYIRQGKEATAVVDQILAQEENWKFEKN 264
Q RE + ++ D L EE W+ ++
Sbjct: 2521 -----QPREPVLHRGLPSSASDMSLQTEEQWEASRS 2551
>gi|181337167 solute carrier family 7 (cationic amino acid
transporter, y+ system), member 14 [Homo sapiens]
Length = 771
Score = 29.6 bits (65), Expect = 5.8
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 98 IFVLAFFRFSGLLLGYAVLRLRHWWVI-AVTTLVSSAFLIVKVILSELLSKGAFGYLLPI 156
+F+L F S ++ G + + WW I V +V +V VIL + + Y+ P
Sbjct: 572 LFILMFIFCSFIIFGSDYISEQSWWAILLVVLMVLLISTLVFVILQQPENPKKLPYMAPC 631
Query: 157 VSFVLAW 163
+ FV A+
Sbjct: 632 LPFVPAF 638
>gi|40549422 Theg homolog isoform 2 [Homo sapiens]
Length = 355
Score = 29.3 bits (64), Expect = 7.5
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 1 MSKLPRELTRDLERSLPAVASLGSSLSHSQSLSSHLLPPPEKRR 44
+S+L R L +DLE +P + S LS SQ L S + KRR
Sbjct: 84 LSELERVLDKDLEEDIPEI----SRLSISQKLPSTTMTKARKRR 123
>gi|7706121 Theg homolog isoform 1 [Homo sapiens]
Length = 379
Score = 29.3 bits (64), Expect = 7.5
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 1 MSKLPRELTRDLERSLPAVASLGSSLSHSQSLSSHLLPPPEKRR 44
+S+L R L +DLE +P + S LS SQ L S + KRR
Sbjct: 84 LSELERVLDKDLEEDIPEI----SRLSISQKLPSTTMTKARKRR 123
>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 28.9 bits (63), Expect = 9.9
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 259 WKFEKNNEYGDTVYTIEVPF-HGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTAC 317
W ++ + Y + P HG F+ + P V+ V P L+ K +
Sbjct: 4433 WNYQGEEQAVQLYYKVFSPTRHG--FLGAGVVSQPLSRVWAAVS-DPTVWPLYYKPIQTA 4489
Query: 318 QILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATS---HSAKPP 374
++ QRV ++ + Y V + PRDF V ++ +LS A S S P
Sbjct: 4490 RLHQRVTNSISLVYLVCNTTLCALKQPRDFCCV--CVEAKEGHLSVMAAQSVYDTSMPRP 4547
Query: 375 THKYVRGENGPGGFIV 390
+ K VRGE P +I+
Sbjct: 4548 SRKMVRGEILPSAWIL 4563
>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 28.9 bits (63), Expect = 9.9
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 259 WKFEKNNEYGDTVYTIEVPF-HGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTAC 317
W ++ + Y + P HG F+ + P V+ V P L+ K +
Sbjct: 4433 WNYQGEEQAVQLYYKVFSPTRHG--FLGAGVVSQPLSRVWAAVS-DPTVWPLYYKPIQTA 4489
Query: 318 QILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATS---HSAKPP 374
++ QRV ++ + Y V + PRDF V ++ +LS A S S P
Sbjct: 4490 RLHQRVTNSISLVYLVCNTTLCALKQPRDFCCV--CVEAKEGHLSVMAAQSVYDTSMPRP 4547
Query: 375 THKYVRGENGPGGFIV 390
+ K VRGE P +I+
Sbjct: 4548 SRKMVRGEILPSAWIL 4563
>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 28.9 bits (63), Expect = 9.9
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 259 WKFEKNNEYGDTVYTIEVPF-HGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTAC 317
W ++ + Y + P HG F+ + P V+ V P L+ K +
Sbjct: 4433 WNYQGEEQAVQLYYKVFSPTRHG--FLGAGVVSQPLSRVWAAVS-DPTVWPLYYKPIQTA 4489
Query: 318 QILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATS---HSAKPP 374
++ QRV ++ + Y V + PRDF V ++ +LS A S S P
Sbjct: 4490 RLHQRVTNSISLVYLVCNTTLCALKQPRDFCCV--CVEAKEGHLSVMAAQSVYDTSMPRP 4547
Query: 375 THKYVRGENGPGGFIV 390
+ K VRGE P +I+
Sbjct: 4548 SRKMVRGEILPSAWIL 4563
>gi|58219008 RAD26L hypothetical protein [Homo sapiens]
Length = 712
Score = 28.9 bits (63), Expect = 9.9
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 196 LLFSGALSEGQFYSPPESFAASDNESDEEVAGKKSFSAQERE----YIRQGKEATAVVDQ 251
LL SG + QF P E E G+K+ ++ ++R+ K T + DQ
Sbjct: 333 LLGSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTK--TLIKDQ 390
Query: 252 ILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPC 291
+ +E+ + ++ VY + T IL++ PC
Sbjct: 391 LPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPC 430
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,696,035
Number of Sequences: 37866
Number of extensions: 727737
Number of successful extensions: 1920
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1905
Number of HSP's gapped (non-prelim): 23
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.