Search of human proteins with 31542868

Search of human proteins with 31542868

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31542868 glycogen synthase 1 (muscle) isoform 1 [Homo
sapiens]
         (737 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31542868 glycogen synthase 1 (muscle) isoform 1 [Homo sapiens]    1516   0.0  
gi|239049591 glycogen synthase 1 (muscle) isoform 2 [Homo sapiens]   1174   0.0  
gi|119372286 glycogen synthase 2 [Homo sapiens]                      1062   0.0  
gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo...    35   0.25 
gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo ...    35   0.25 
gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo ...    35   0.25 
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    35   0.25 
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    35   0.25 
gi|219842214 protein phosphatase 1, regulatory (inhibitor) subun...    35   0.33 
gi|219842212 protein phosphatase 1, regulatory (inhibitor) subun...    35   0.33 
gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit...    35   0.33 
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo...    35   0.33 
gi|41350335 transcription elongation factor A (SII), 3 [Homo sap...    35   0.33 
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        35   0.33 
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]        35   0.33 
gi|11386181 H2.0-like homeobox [Homo sapiens]                          34   0.43 
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]       34   0.56 
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]       34   0.56 
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]       34   0.56 
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]        34   0.56 
gi|148612875 RUN and TBC1 domain containing 2 isoform 4 [Homo sa...    34   0.56 
gi|148612840 RUN and TBC1 domain containing 2 isoform 3 [Homo sa...    34   0.56 
gi|90577164 RUN and TBC1 domain containing 2 isoform 2 [Homo sap...    34   0.56 
gi|90577167 RUN and TBC1 domain containing 2 isoform 1 [Homo sap...    34   0.56 
gi|4758410 fragile X mental retardation syndrome related protein...    34   0.56 
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa...    34   0.56 
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         33   0.73 
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    33   0.73 
gi|6005757 chromatin-specific transcription elongation factor la...    33   0.95 
gi|38787970 tensin like C1 domain containing phosphatase isoform...    33   0.95 

>gi|31542868 glycogen synthase 1 (muscle) isoform 1 [Homo sapiens]
          Length = 737

 Score = 1516 bits (3925), Expect = 0.0
 Identities = 737/737 (100%), Positives = 737/737 (100%)

Query: 1   MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD 60
           MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD
Sbjct: 1   MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD 60

Query: 61  NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVG 120
           NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVG
Sbjct: 61  NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVG 120

Query: 121 ASAWALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHFH 180
           ASAWALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHFH
Sbjct: 121 ASAWALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHFH 180

Query: 181 EWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYH 240
           EWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYH
Sbjct: 181 EWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYH 240

Query: 241 RYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQS 300
           RYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQS
Sbjct: 241 RYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQS 300

Query: 301 KARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQ 360
           KARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQ
Sbjct: 301 KARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQ 360

Query: 361 TVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKML 420
           TVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKML
Sbjct: 361 TVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKML 420

Query: 421 DKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPE 480
           DKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPE
Sbjct: 421 DKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPE 480

Query: 481 FLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEE 540
           FLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEE
Sbjct: 481 FLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEE 540

Query: 541 HIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKY 600
           HIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKY
Sbjct: 541 HIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKY 600

Query: 601 LGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDE 660
           LGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDE
Sbjct: 601 LGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDE 660

Query: 661 EDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLS 720
           EDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLS
Sbjct: 661 EDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLS 720

Query: 721 TPSEPLSPTSSLGEERN 737
           TPSEPLSPTSSLGEERN
Sbjct: 721 TPSEPLSPTSSLGEERN 737


>gi|239049591 glycogen synthase 1 (muscle) isoform 2 [Homo sapiens]
          Length = 673

 Score = 1174 bits (3036), Expect = 0.0
 Identities = 573/574 (99%), Positives = 574/574 (100%)

Query: 164 EFLAQSEEKPHVVAHFHEWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNN 223
           +FLAQSEEKPHVVAHFHEWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNN
Sbjct: 100 KFLAQSEEKPHVVAHFHEWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNN 159

Query: 224 LENFNVDKEAGERQIYHRYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLN 283
           LENFNVDKEAGERQIYHRYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLN
Sbjct: 160 LENFNVDKEAGERQIYHRYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLN 219

Query: 284 VKKFSAMHEFQNLHAQSKARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFL 343
           VKKFSAMHEFQNLHAQSKARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFL
Sbjct: 220 VKKFSAMHEFQNLHAQSKARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFL 279

Query: 344 EALARLNYLLRVNGSEQTVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRK 403
           EALARLNYLLRVNGSEQTVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRK
Sbjct: 280 EALARLNYLLRVNGSEQTVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRK 339

Query: 404 LYESLLVGSLPDMNKMLDKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRI 463
           LYESLLVGSLPDMNKMLDKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRI
Sbjct: 340 LYESLLVGSLPDMNKMLDKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRI 399

Query: 464 GLFNSSADRVKVIFHPEFLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG 523
           GLFNSSADRVKVIFHPEFLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG
Sbjct: 400 GLFNSSADRVKVIFHPEFLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG 459

Query: 524 IPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRI 583
           IPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRI
Sbjct: 460 IPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRI 519

Query: 584 IQRNRTERLSDLLDWKYLGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVP 643
           IQRNRTERLSDLLDWKYLGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVP
Sbjct: 520 IQRNRTERLSDLLDWKYLGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVP 579

Query: 644 PSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSST 703
           PSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSST
Sbjct: 580 PSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSST 639

Query: 704 SGSKRNSVDTATSSSLSTPSEPLSPTSSLGEERN 737
           SGSKRNSVDTATSSSLSTPSEPLSPTSSLGEERN
Sbjct: 640 SGSKRNSVDTATSSSLSTPSEPLSPTSSLGEERN 673



 Score =  207 bits (527), Expect = 3e-53
 Identities = 100/100 (100%), Positives = 100/100 (100%)

Query: 1   MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD 60
           MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD
Sbjct: 1   MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD 60

Query: 61  NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCK 100
           NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCK
Sbjct: 61  NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCK 100


>gi|119372286 glycogen synthase 2 [Homo sapiens]
          Length = 703

 Score = 1062 bits (2746), Expect = 0.0
 Identities = 498/688 (72%), Positives = 594/688 (86%), Gaps = 9/688 (1%)

Query: 5   RTLSMSSLPGLEDWE-DEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGDNYF 63
           R+LS++SL GL  WE +E  +E  +LFEVAWEV NKVGGIYTV+QTKAK T DEWG+NYF
Sbjct: 5   RSLSVTSLGGLPQWEVEELPVEELLLFEVAWEVTNKVGGIYTVIQTKAKTTADEWGENYF 64

Query: 64  LVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVGASA 123
           L+GPY E  ++TQVE  E    A++R +D+MN  GC+V+FGRWLIEG P VVL D+G SA
Sbjct: 65  LIGPYFEHNMKTQVEQCEPVNDAVRRAVDAMNKHGCQVHFGRWLIEGSPYVVLFDIGYSA 124

Query: 124 WALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHFHEWL 183
           W L+RWKG+LW+ C++G+P++DREAND ++FG LT WFL E    ++ K +VVA FHEW 
Sbjct: 125 WNLDRWKGDLWEACSVGIPYHDREANDMLIFGSLTAWFLKEVTDHADGK-YVVAQFHEWQ 183

Query: 184 AGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYHRYC 243
           AG+GL L RAR+LP+ATIFTTHATLLGRYLCA  +DFYN+L+ FN+DKEAGERQIYHRYC
Sbjct: 184 AGIGLILSRARKLPIATIFTTHATLLGRYLCAANIDFYNHLDKFNIDKEAGERQIYHRYC 243

Query: 244 MERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQSKAR 303
           MERA+ HCAHVFTTVS+ITAIEA+H+LKRKPD+VTPNGLNVKKFSA+HEFQNLHA  KAR
Sbjct: 244 MERASVHCAHVFTTVSEITAIEAEHMLKRKPDVVTPNGLNVKKFSAVHEFQNLHAMYKAR 303

Query: 304 IQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTVV 363
           IQ+FVRGHFYGHLDF+L+KTL+ FIAGRYEFSNKGAD+FLE+L+RLN+LLR++ S+ TV+
Sbjct: 304 IQDFVRGHFYGHLDFDLEKTLFLFIAGRYEFSNKGADIFLESLSRLNFLLRMHKSDITVM 363

Query: 364 AFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKMLDKE 423
            FFIMPA+TNNFNVETLKGQAVRKQLWD A++VKEKFG+KLY++LL G +PD+N +LD++
Sbjct: 364 VFFIMPAKTNNFNVETLKGQAVRKQLWDVAHSVKEKFGKKLYDALLRGEIPDLNDILDRD 423

Query: 424 DFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPEFLS 483
           D T+MKRAIF+TQRQS PPV THNM+DDS+DPIL+TIRRIGLFN+  DRVKVI HPEFLS
Sbjct: 424 DLTIMKRAIFSTQRQSLPPVTTHNMIDDSTDPILSTIRRIGLFNNRTDRVKVILHPEFLS 483

Query: 484 STSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIA 543
           STSPLLP+DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPS++TNLSGFGCFM+EH+A
Sbjct: 484 STSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQEHVA 543

Query: 544 DPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGR 603
           DP+AYGIYI+DRRFRS DDSC+QLT FLY FC+QSRRQRIIQRNRTERLSDLLDW+YLGR
Sbjct: 544 DPTAYGIYIVDRRFRSPDDSCNQLTKFLYGFCKQSRRQRIIQRNRTERLSDLLDWRYLGR 603

Query: 604 YYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDP 663
           YY  ARH+ LS+AFP+ F  E       +G++YPRP+SVPPSPS S+ SSP QS D ED 
Sbjct: 604 YYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASSP-QSSDVED- 661

Query: 664 RNGPLEEDGERYDEDEEAAKDRRNIRAP 691
                E + ERYDE+EEA +DR NI++P
Sbjct: 662 -----EVEDERYDEEEEAERDRLNIKSP 684


>gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo
           sapiens]
          Length = 1198

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 13/105 (12%)

Query: 637 PRPASVPPSPSL----SRHSSPHQ--SEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRA 690
           PRPA V P   L    S+ +   Q  S DEED       E+GE  +EDE+      N   
Sbjct: 850 PRPAFVIPEVRLDSTYSQKAGAEQGCSGDEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGE 909

Query: 691 PEWPRRASCTSSTSGSK-------RNSVDTATSSSLSTPSEPLSP 728
               +R+S   +  G++       +NS+   T S  S   EP  P
Sbjct: 910 RSEAKRSSMIETGQGAEGGLSLRVQNSLRRRTHSEGSLLQEPRGP 954


>gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo
           sapiens]
          Length = 519

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 13/105 (12%)

Query: 637 PRPASVPPSPSL----SRHSSPHQ--SEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRA 690
           PRPA V P   L    S+ +   Q  S DEED       E+GE  +EDE+      N   
Sbjct: 171 PRPAFVIPEVRLDSTYSQKAGAEQGCSGDEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGE 230

Query: 691 PEWPRRASCTSSTSGSK-------RNSVDTATSSSLSTPSEPLSP 728
               +R+S   +  G++       +NS+   T S  S   EP  P
Sbjct: 231 RSEAKRSSMIETGQGAEGGLSLRVQNSLRRRTHSEGSLLQEPRGP 275


>gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo
           sapiens]
          Length = 917

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 13/105 (12%)

Query: 637 PRPASVPPSPSL----SRHSSPHQ--SEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRA 690
           PRPA V P   L    S+ +   Q  S DEED       E+GE  +EDE+      N   
Sbjct: 569 PRPAFVIPEVRLDSTYSQKAGAEQGCSGDEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGE 628

Query: 691 PEWPRRASCTSSTSGSK-------RNSVDTATSSSLSTPSEPLSP 728
               +R+S   +  G++       +NS+   T S  S   EP  P
Sbjct: 629 RSEAKRSSMIETGQGAEGGLSLRVQNSLRRRTHSEGSLLQEPRGP 673


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 6/96 (6%)

Query: 624 EPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEE-DGERYDEDEEAA 682
           EP  A  A G   P PA  PPSPS      P + ++EE     P+EE + ++    EE A
Sbjct: 778 EPTPASEATGAPTPPPA--PPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELA 835

Query: 683 KDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSS 718
            D       E P ++ CT           D   + +
Sbjct: 836 VDTGK---AEEPVKSECTEEAEEGPAKGKDAEAAEA 868


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 6/96 (6%)

Query: 624 EPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEE-DGERYDEDEEAA 682
           EP  A  A G   P PA  PPSPS      P + ++EE     P+EE + ++    EE A
Sbjct: 795 EPTPASEATGAPTPPPA--PPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELA 852

Query: 683 KDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSS 718
            D       E P ++ CT           D   + +
Sbjct: 853 VDTGK---AEEPVKSECTEEAEEGPAKGKDAEAAEA 885


>gi|219842214 protein phosphatase 1, regulatory (inhibitor) subunit
           12A isoform b [Homo sapiens]
          Length = 943

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 24/84 (28%), Positives = 38/84 (45%)

Query: 649 SRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKR 708
           SR +   + E+EE  +    ++D E+ +E +E+   R +    ++ R    T        
Sbjct: 627 SRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSREDEYKQKYSRTYDETYQRYRPVS 686

Query: 709 NSVDTATSSSLSTPSEPLSPTSSL 732
            S  T  SSSLST S  L  +S L
Sbjct: 687 TSSSTTPSSSLSTMSSSLYASSQL 710


>gi|219842212 protein phosphatase 1, regulatory (inhibitor) subunit
           12A isoform a [Homo sapiens]
          Length = 1030

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 24/84 (28%), Positives = 38/84 (45%)

Query: 649 SRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKR 708
           SR +   + E+EE  +    ++D E+ +E +E+   R +    ++ R    T        
Sbjct: 714 SRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSREDEYKQKYSRTYDETYQRYRPVS 773

Query: 709 NSVDTATSSSLSTPSEPLSPTSSL 732
            S  T  SSSLST S  L  +S L
Sbjct: 774 TSSSTTPSSSLSTMSSSLYASSQL 797


>gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit
           12A isoform a [Homo sapiens]
          Length = 1030

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 24/84 (28%), Positives = 38/84 (45%)

Query: 649 SRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKR 708
           SR +   + E+EE  +    ++D E+ +E +E+   R +    ++ R    T        
Sbjct: 714 SRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSREDEYKQKYSRTYDETYQRYRPVS 773

Query: 709 NSVDTATSSSLSTPSEPLSPTSSL 732
            S  T  SSSLST S  L  +S L
Sbjct: 774 TSSSTTPSSSLSTMSSSLYASSQL 797


>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
           polymerase [Homo sapiens]
          Length = 1327

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 43/154 (27%), Positives = 58/154 (37%), Gaps = 32/154 (20%)

Query: 611 MALSKAFPEHFTYEPNEADAAQGYRYPRPASVPP-SPSLSRHSSPHQSEDE-----EDPR 664
           MA S+    H  +   +   A G   P P   PP SP L+  ++P             PR
Sbjct: 1   MAASRRSQHHHHHHQQQLQPAPGASAPPPPPPPPLSPGLAPGTTPASPTASGLAPFASPR 60

Query: 665 NGPL--EEDGERYDEDEEAAKDRRN--------------IRAPEWPRRASCTSSTSG--- 705
           +G    E DG R   D   + D  +                AP  P  A  TSS +G   
Sbjct: 61  HGLALPEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPVVP--AVSTSSAAGVAP 118

Query: 706 -----SKRNSVDTATSSSLSTPSEPLSPTSSLGE 734
                   NS  +++S + S+ S P SP SSL E
Sbjct: 119 NPAGSGSNNSPSSSSSPTSSSSSSPSSPGSSLAE 152


>gi|41350335 transcription elongation factor A (SII), 3 [Homo
           sapiens]
          Length = 348

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 25/90 (27%)

Query: 665 NGPLEEDGERYDEDEEAAKDRRNIRAPEW--------PRRA------------SCTSSTS 704
           + P    GE+ +E E+A K  + +   +W        PR+             S +S++S
Sbjct: 80  DSPGPPKGEKGEEREKAKKKEKGLECSDWKPEAGLSPPRKKREDPKTRRDSVDSKSSASS 139

Query: 705 GSKRNSVDTATSS-----SLSTPSEPLSPT 729
             KR SV+ + SS     S  TPS PL+PT
Sbjct: 140 SPKRPSVERSNSSKSKAESPKTPSSPLTPT 169


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)

Query: 637 PRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRR 696
           P+P S+    S SR  +P Q + ++    G   E      E ++++K +++ R+    ++
Sbjct: 168 PKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKH-RSESESKK 226

Query: 697 ASCTSSTSGSKRNSVDTATSSSLSTPSEPLS 727
               S T  SKR S D     S ST   P S
Sbjct: 227 RKHRSPTPKSKRKSKDKKRKRSRSTTPAPKS 257



 Score = 34.7 bits (78), Expect = 0.33
 Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 17/125 (13%)

Query: 624  EPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAK 683
            +P+   A Q  +  R +S   S S S  SS   S       +   + +G       E A 
Sbjct: 2517 QPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVAL 2576

Query: 684  DR------------RNIRAPE-----WPRRASCTSSTSGSKRNSVDTATSSSLSTPSEPL 726
             R            R  R PE       RR+S +SS+S S  +S  +++SSS S+ S   
Sbjct: 2577 KRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2636

Query: 727  SPTSS 731
            S +SS
Sbjct: 2637 SSSSS 2641


>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
          Length = 1564

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 6/54 (11%)

Query: 649  SRHSSPHQSEDEEDPRNGPLE-----EDGERYDEDEEAAKDRRNIRAPEWPRRA 697
            SR SSP +S+ +   R+G  +     ++ +RY+ D E  ++RR+ R  EW R A
Sbjct: 1275 SRRSSP-ESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDA 1327


>gi|11386181 H2.0-like homeobox [Homo sapiens]
          Length = 488

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 6/93 (6%)

Query: 645 SPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTS 704
           SPS S   +  +S D E     P   D ER +  E +      I+AP      + +S+ S
Sbjct: 366 SPSRSEGEAESESSDSESLDMAP--SDTERTEGSERSLHQTTVIKAPVTGALITASSAGS 423

Query: 705 GSKR----NSVDTATSSSLSTPSEPLSPTSSLG 733
           G       NS   +++SSLS+ S      SSLG
Sbjct: 424 GGSSGGGGNSFSFSSASSLSSSSTSAGCASSLG 456


>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
          Length = 1083

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 657 SEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAP 691
           SE EE+P +   EE+ E YDE+EE   D R  + P
Sbjct: 36  SEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKP 70


>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
          Length = 1087

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 657 SEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAP 691
           SE EE+P +   EE+ E YDE+EE   D R  + P
Sbjct: 36  SEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKP 70


>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
          Length = 1087

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 657 SEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAP 691
           SE EE+P +   EE+ E YDE+EE   D R  + P
Sbjct: 36  SEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKP 70


>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
          Length = 1087

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 657 SEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAP 691
           SE EE+P +   EE+ E YDE+EE   D R  + P
Sbjct: 36  SEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKP 70


>gi|148612875 RUN and TBC1 domain containing 2 isoform 4 [Homo
           sapiens]
          Length = 1032

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 249 AHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQSKARIQEFV 308
           A+C H+ T  + ++A+   H++   PD+    G  +   +A    Q LH  +    QE +
Sbjct: 501 AYCRHLSTVRTHLSAL-VNHMIV-SPDLPCDAGQGL---TARIWEQYLHDSTSYEEQELL 555

Query: 309 RGHFYGHLDFNLDKTLYFFIAGRYEF 334
           R  +YG +   + K ++ F+ G Y+F
Sbjct: 556 RLIYYGGIQPEIRKAVWPFLLGHYQF 581


>gi|148612840 RUN and TBC1 domain containing 2 isoform 3 [Homo
           sapiens]
          Length = 1093

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 249 AHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQSKARIQEFV 308
           A+C H+ T  + ++A+   H++   PD+    G  +   +A    Q LH  +    QE +
Sbjct: 501 AYCRHLSTVRTHLSAL-VNHMIV-SPDLPCDAGQGL---TARIWEQYLHDSTSYEEQELL 555

Query: 309 RGHFYGHLDFNLDKTLYFFIAGRYEF 334
           R  +YG +   + K ++ F+ G Y+F
Sbjct: 556 RLIYYGGIQPEIRKAVWPFLLGHYQF 581


>gi|90577164 RUN and TBC1 domain containing 2 isoform 2 [Homo
           sapiens]
          Length = 1087

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 249 AHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQSKARIQEFV 308
           A+C H+ T  + ++A+   H++   PD+    G  +   +A    Q LH  +    QE +
Sbjct: 556 AYCRHLSTVRTHLSAL-VNHMIV-SPDLPCDAGQGL---TARIWEQYLHDSTSYEEQELL 610

Query: 309 RGHFYGHLDFNLDKTLYFFIAGRYEF 334
           R  +YG +   + K ++ F+ G Y+F
Sbjct: 611 RLIYYGGIQPEIRKAVWPFLLGHYQF 636


>gi|90577167 RUN and TBC1 domain containing 2 isoform 1 [Homo
           sapiens]
          Length = 1148

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 249 AHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQSKARIQEFV 308
           A+C H+ T  + ++A+   H++   PD+    G  +   +A    Q LH  +    QE +
Sbjct: 556 AYCRHLSTVRTHLSAL-VNHMIV-SPDLPCDAGQGL---TARIWEQYLHDSTSYEEQELL 610

Query: 309 RGHFYGHLDFNLDKTLYFFIAGRYEF 334
           R  +YG +   + K ++ F+ G Y+F
Sbjct: 611 RLIYYGGIQPEIRKAVWPFLLGHYQF 636


>gi|4758410 fragile X mental retardation syndrome related protein 2
           [Homo sapiens]
          Length = 673

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 639 PASVPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDED--EEAAKDRRNIRAPEWPRR 696
           P   PP+ +  R S   +++++    +G LE DG    E+  E+ ++ +R  R+     R
Sbjct: 535 PGEPPPASARRRRSRRRRTDEDRTVMDGGLESDGPNMTENGLEDESRPQRRNRSRRRRNR 594

Query: 697 ASCTSSTSGSKRNSVDTA----TSSSLSTPSEPLSPT 729
            + T  +    R  V  A     + S S  S PL  T
Sbjct: 595 GNRTDGSISGDRQPVTVADYISRAESQSRQSAPLERT 631



 Score = 31.2 bits (69), Expect = 3.6
 Identities = 33/111 (29%), Positives = 42/111 (37%), Gaps = 2/111 (1%)

Query: 622 TYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEED-GERYDEDEE 680
           TY  +     +G R   PA   PS  +S  S     + EE  R GP + D   R +E   
Sbjct: 424 TYGGSYGGRGRGRRTGGPA-YGPSSDVSTASETESEKREEPNRAGPGDRDPPTRGEESRR 482

Query: 681 AAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLSTPSEPLSPTSS 731
                R    P  PR  S  +S+S S       +   SL   SEP  P  S
Sbjct: 483 RPTGGRGRGPPPAPRPTSRYNSSSISSVLKDPDSNPYSLLDTSEPEPPVDS 533


>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
           sapiens]
          Length = 1710

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 624 EPNEADAAQGYRY-PRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAA 682
           +P + D A+ ++  P   +V  S  L +     Q +  +   N   EED    ++ ++++
Sbjct: 77  KPPKVDGAEFWKSSPSILAVQRSAILKKQQQQQQQQQHQASSNSGSEEDSSSSEDSDDSS 136

Query: 683 KD--RRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLSTPSEPLSPTSSL 732
            +  R+  +  +W    S + S SGS   S +    SS         P + +
Sbjct: 137 SEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEEREKSSCDETESDYEPKNKV 188


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 35/122 (28%)

Query: 627  EADAAQGYRYPRPASVPPSPSLSRHSS--------------PHQSEDEEDPRNGPLEEDG 672
            E  AA+    P P + PP P+L+  S               P ++ +E   R G  EE+ 
Sbjct: 967  EERAAKVPSTPPPKAAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGGAEEEEE 1026

Query: 673  ERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLSTPSEPLSPTSSL 732
            E  +E+EE  ++                      ++ +  TATS++ + PS   S  S+ 
Sbjct: 1027 EEEEEEEEEEEE---------------------EQQPATTTATSTAAAAPSTAPSAGSTA 1065

Query: 733  GE 734
            G+
Sbjct: 1066 GD 1067


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
            [Homo sapiens]
          Length = 2073

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 17/105 (16%)

Query: 648  LSRHSSPHQSE--DEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPR---------- 695
            LS+ SS  + E  DEE+      EE+ E  +E+EE  ++  NI++   PR          
Sbjct: 1064 LSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSP-PRLTKPQSVAIK 1122

Query: 696  --RASCTSSTSGSKRNSVDTA-TSSSLSTPSEPLS-PTSSLGEER 736
              R        G KR  ++++ T+ ++S  +E L+ P  +  EER
Sbjct: 1123 RKRPFVLKKKRGRKRRRINSSVTTETISETTEVLNEPFDNSDEER 1167


>gi|6005757 chromatin-specific transcription elongation factor large
            subunit [Homo sapiens]
          Length = 1047

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 618  PEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDE 677
            P    YE  E D+ + Y      S     SL        SE+E       LEE+  + D 
Sbjct: 950  PSEDDYEEEEEDSDEDYSSEAEESDYSKESLG-------SEEESGKDWDELEEEARKADR 1002

Query: 678  DEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNS 710
            +    ++    R+    R+AS  SS  GS R S
Sbjct: 1003 ESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGS 1035


>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
           [Homo sapiens]
          Length = 1285

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 6/104 (5%)

Query: 632 QGYRYPRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAK-----DRR 686
           +G  YP P +  P        SP   +  +     P EE G+RY      A         
Sbjct: 690 EGRGYPSPGAHSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPLASAE 749

Query: 687 NIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLSTPSEPLSPTS 730
           ++    W    S  S+   S R++  +A SS LS PS PL  +S
Sbjct: 750 SLEPVSWREGPSGHSTLPRSPRDAPCSA-SSELSGPSTPLHTSS 792


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,776,164
Number of Sequences: 37866
Number of extensions: 1357932
Number of successful extensions: 7080
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 6730
Number of HSP's gapped (non-prelim): 417
length of query: 737
length of database: 18,247,518
effective HSP length: 110
effective length of query: 627
effective length of database: 14,082,258
effective search space: 8829575766
effective search space used: 8829575766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.