Guide to the Human Genome
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Name: GYS2 Sequence: fasta or formatted (703aa) NCBI GI: 119372286
Description:

glycogen synthase 2

Referenced in:

Glycogen

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         40           2
 C cysteine            1.6         11           1
 D aspartate           6.1         43           2
 E glutamate           7.0         49           4
 F phenylalanine       5.7         40           2
 G glycine             5.8         41           2
 H histidine           4.0         28           1
 I isoleucine          5.1         36           2
 K lysine              5.3         37           3
 L leucine             9.1         64           3
 M methionine          2.1         15           1
 N asparagine          3.8         27           2
 P proline             4.8         34           2
 Q glutamine           3.1         22           1
 R arginine            6.5         46           2
 S serine              6.3         44           2
 T threonine           5.7         40           2
 V valine              6.5         46           2
 W tryptophan          1.7         12           1
 Y tyrosine            4.0         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycogen synthase 2 
GYS1                  0.727   glycogen synthase 1 (muscle) isoform 1 
GYS1                  0.574   glycogen synthase 1 (muscle) isoform 2 
PVRL1                 0.008   poliovirus receptor-related 1 isoform 2 
TTBK1                 0.008   tau tubulin kinase 1 
BRD2                  0.008   bromodomain containing 2 
BRD2                  0.008   bromodomain containing 2 
SCAF1                 0.008   SR-related CTD-associated factor 1 
BAZ2B                 0.007   bromodomain adjacent to zinc finger domain, 2B [Homo...
CHIC1                 0.007   cysteine-rich hydrophobic domain 1 
MUC16                 0.006   mucin 16 
SMAD1                 0.006   Sma- and Mad-related protein 1 
SMAD1                 0.006   Sma- and Mad-related protein 1 
SCYL1                 0.006   SCY1-like 1 isoform A 
DCAF5                 0.006   WD repeat domain 22 
GNAS                  0.006   GNAS complex locus NESP55 
SUPT5H                0.006   suppressor of Ty 5 homolog isoform b 
SUPT5H                0.006   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.006   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.006   suppressor of Ty 5 homolog isoform a 
TULP1                 0.006   tubby like protein 1 
KCNN1                 0.006   potassium intermediate/small conductance calcium-act...
SYVN1                 0.006   synoviolin 1 isoform b 
SYVN1                 0.006   synoviolin 1 isoform a 
STK11IP               0.006   LKB1 interacting protein 
ASPSCR1               0.005   alveolar soft part sarcoma chromosome region, candid...
DMRT2                 0.005   doublesex and mab-3 related transcription factor 2 ...
DMRT2                 0.005   doublesex and mab-3 related transcription factor 2 is...
DMRT2                 0.005   doublesex and mab-3 related transcription factor 2 ...
SHROOM4               0.005   shroom family member 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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