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Search of human proteins with 31377667
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377667 peroxisomal LON protease-like [Homo sapiens]
(852 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377667 peroxisomal LON protease-like [Homo sapiens] 1671 0.0
gi|21396489 mitochondrial lon peptidase 1 [Homo sapiens] 462 e-130
gi|31881687 replication factor C 4 [Homo sapiens] 43 0.001
gi|4506491 replication factor C 4 [Homo sapiens] 43 0.001
gi|21327685 YME1-like 1 isoform 1 [Homo sapiens] 39 0.020
gi|7657689 YME1-like 1 isoform 3 [Homo sapiens] 39 0.020
gi|42740903 MTERF domain containing 2 [Homo sapiens] 38 0.045
gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens] 37 0.059
gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2... 36 0.13
gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1... 36 0.13
gi|221218991 neuroblastoma breakpoint family, member 4 [Homo sap... 36 0.13
gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens] 36 0.17
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 36 0.17
gi|13540606 caseinolytic peptidase B [Homo sapiens] 36 0.17
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 35 0.29
gi|156564401 vesicle-fusing ATPase [Homo sapiens] 35 0.39
gi|24415404 MDN1, midasin homolog [Homo sapiens] 35 0.39
gi|113426932 PREDICTED: similar to N-ethylmaleimide-sensitive fa... 34 0.50
gi|31742536 fidgetin-like 1 [Homo sapiens] 34 0.50
gi|112789543 fidgetin-like 1 [Homo sapiens] 34 0.50
gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens] 34 0.66
gi|194306571 replication factor C 5 isoform 2 [Homo sapiens] 34 0.66
gi|194306567 replication factor C 5 isoform 2 [Homo sapiens] 34 0.66
gi|6677723 replication factor C 5 isoform 1 [Homo sapiens] 34 0.66
gi|64084766 fidgetin [Homo sapiens] 33 0.86
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 33 1.5
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 33 1.5
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 33 1.5
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 33 1.5
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 33 1.5
>gi|31377667 peroxisomal LON protease-like [Homo sapiens]
Length = 852
Score = 1671 bits (4328), Expect = 0.0
Identities = 852/852 (100%), Positives = 852/852 (100%)
Query: 1 MSSVSPIQIPSRLPLLLTHEGVLLPGSTMRTSVDSARNLQLVRSRLLKGTSLQSTILGVI 60
MSSVSPIQIPSRLPLLLTHEGVLLPGSTMRTSVDSARNLQLVRSRLLKGTSLQSTILGVI
Sbjct: 1 MSSVSPIQIPSRLPLLLTHEGVLLPGSTMRTSVDSARNLQLVRSRLLKGTSLQSTILGVI 60
Query: 61 PNTPDPASDAQDLPPLHRIGTAALAVQVVGSNWPKPHYTLLITGLCRFQIVQVLKEKPYP 120
PNTPDPASDAQDLPPLHRIGTAALAVQVVGSNWPKPHYTLLITGLCRFQIVQVLKEKPYP
Sbjct: 61 PNTPDPASDAQDLPPLHRIGTAALAVQVVGSNWPKPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGLKLLQKTRKPKQDDDK 240
EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGLKLLQKTRKPKQDDDK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGLKLLQKTRKPKQDDDK 240
Query: 241 RVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKM 300
RVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKM
Sbjct: 241 RVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKM 300
Query: 301 PQSMPEYALTRNYLELMVELPWNKSTTDRLDIRAARILLDNDHYAMEKLKKRVLEYLAVR 360
PQSMPEYALTRNYLELMVELPWNKSTTDRLDIRAARILLDNDHYAMEKLKKRVLEYLAVR
Sbjct: 301 PQSMPEYALTRNYLELMVELPWNKSTTDRLDIRAARILLDNDHYAMEKLKKRVLEYLAVR 360
Query: 361 QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGS 420
QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGS
Sbjct: 361 QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGS 420
Query: 421 MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF 480
MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF
Sbjct: 421 MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF 480
Query: 481 DLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQ 540
DLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQ
Sbjct: 481 DLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQ 540
Query: 541 IQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC 600
IQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC
Sbjct: 541 IQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC 600
Query: 601 REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPPMYEMEVSQRLSQPGVAIGL 660
REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPPMYEMEVSQRLSQPGVAIGL
Sbjct: 601 REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPPMYEMEVSQRLSQPGVAIGL 660
Query: 661 AWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSF 720
AWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSF
Sbjct: 661 AWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSF 720
Query: 721 DLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPV 780
DLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPV
Sbjct: 721 DLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPV 780
Query: 781 GGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGGFT 840
GGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGGFT
Sbjct: 781 GGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGGFT 840
Query: 841 VKTRPGLLNSKL 852
VKTRPGLLNSKL
Sbjct: 841 VKTRPGLLNSKL 852
>gi|21396489 mitochondrial lon peptidase 1 [Homo sapiens]
Length = 959
Score = 462 bits (1188), Expect = e-130
Identities = 256/665 (38%), Positives = 388/665 (58%), Gaps = 60/665 (9%)
Query: 183 LPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGLKLLQKTRKPKQDDDK-- 240
L D+ ++ + E +L+ ++ +R + LL ++ E KL Q+ + ++ K
Sbjct: 331 LSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREVEEKIKQT 390
Query: 241 -RVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKK 299
R ++ +I LE +D+D + ++++ +P+ V +E+ +L
Sbjct: 391 HRKYLLQEQLKIIKKELGLEKDDKDAIEEKF---RERLKELVVPKHVMDVVDEELSKLGL 447
Query: 300 MPQSMPEYALTRNYLELMVELPWNKSTTDRLDIRAARILLDNDHYAMEKLKKRVLEYLAV 359
+ E+ +TRNYL+ + +PW K + + LD+ A+ +L+ DHY ME +KKR+LE++AV
Sbjct: 448 LDNHSSEFNVTRNYLDWLTSIPWGKYSNENLDLARAQAVLEEDHYGMEDVKKRILEFIAV 507
Query: 360 RQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVG 419
QL+ + +G ILCF GPPGVGKTS+ RS+A+ L RE+ R ++GG+ D ++I+GHRRTYVG
Sbjct: 508 SQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFSVGGMTDVAEIKGHRRTYVG 567
Query: 420 SMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVA 479
+MPG+II LK NP+ L+DEVDK+G+ QGDP++ALLE+LDPEQN NF DHYL+V
Sbjct: 568 AMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSALLELLDPEQNANFLDHYLDVP 627
Query: 480 FDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQ 539
DLS+VLFI TAN T TIP L DRME+I V GY +EK+ IA R+L+P+ GL
Sbjct: 628 VDLSKVLFICTANVTDTIPEPLRDRMEMINVSGYVAQEKLAIAERYLVPQARALCGLDES 687
Query: 540 QIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREG 599
+ ++ +I +Y RE+GVR+L +++ + R A K+ G+ + ++
Sbjct: 688 KAKLSSDVLTLLIKQYCRESGVRNLQKQVEKVLRKSAYKIVSGEAESVEV---------- 737
Query: 600 CREHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPPMYEMEVSQRLSQPGVAIG 659
PE+ L+D +G P++ +E ++ PGV +G
Sbjct: 738 ---------TPEN---------------------LQDFVGKPVFTVERMYDVTPPGVVMG 767
Query: 660 LAWTPLGGEIMFVEAS---------RMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKK 710
LAWT +GG +FVE S + D +G L +TGQLG+VMKESA +A ++ R+ +
Sbjct: 768 LAWTAMGGSTLFVETSLRRPQDKDAKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQ 827
Query: 711 YQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGE 770
+ N D L + IHLH P GA KDGPSAG TIVT L SL GR VR ++AMTGE
Sbjct: 828 HAPAN-----DYLVTSHIHLHVPEGATPKDGPSAGCTIVTALLSLAMGRPVRQNLAMTGE 882
Query: 771 ITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEV 830
++L G +LPVGGIK+K +AA RAG+ +++P N+KD + + + L E+
Sbjct: 883 VSLTGKILPVGGIKEKTIAAKRAGVTCIVLPAENKKDFYDLAAFITEGLEVHFVEHYREI 942
Query: 831 LNAAF 835
+ AF
Sbjct: 943 FDIAF 947
>gi|31881687 replication factor C 4 [Homo sapiens]
Length = 363
Score = 43.1 bits (100), Expect = 0.001
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 22/191 (11%)
Query: 346 MEKLKKRVLEYLAVRQ-----LKNNLKG---PILCFVGPPGVGKTSVGRSVAKTL-GREF 396
+EK + + ++ +A ++ LK +L+G P L F GPPG GKTS + A+ L G E
Sbjct: 41 VEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPEL 100
Query: 397 HRIALGGVCDQSDIRGHR--RTYVGSMPGRIINGLKTVGVNNPVF---LLDEVDKLGKSL 451
R+ + + + SD RG + R V + ++G ++ G P F +LDE D + +
Sbjct: 101 FRLRVLEL-NASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAA 159
Query: 452 QGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVP 511
Q AAL ++ E T + + +S+++ T+ + L D+++ ++
Sbjct: 160 Q----AALRRTMEKESK---TTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLL 212
Query: 512 GYTQEEKIEIA 522
++E ++I+
Sbjct: 213 DIAKKENVKIS 223
>gi|4506491 replication factor C 4 [Homo sapiens]
Length = 363
Score = 43.1 bits (100), Expect = 0.001
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 22/191 (11%)
Query: 346 MEKLKKRVLEYLAVRQ-----LKNNLKG---PILCFVGPPGVGKTSVGRSVAKTL-GREF 396
+EK + + ++ +A ++ LK +L+G P L F GPPG GKTS + A+ L G E
Sbjct: 41 VEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPEL 100
Query: 397 HRIALGGVCDQSDIRGHR--RTYVGSMPGRIINGLKTVGVNNPVF---LLDEVDKLGKSL 451
R+ + + + SD RG + R V + ++G ++ G P F +LDE D + +
Sbjct: 101 FRLRVLEL-NASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAA 159
Query: 452 QGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVP 511
Q AAL ++ E T + + +S+++ T+ + L D+++ ++
Sbjct: 160 Q----AALRRTMEKESK---TTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLL 212
Query: 512 GYTQEEKIEIA 522
++E ++I+
Sbjct: 213 DIAKKENVKIS 223
>gi|21327685 YME1-like 1 isoform 1 [Homo sapiens]
Length = 773
Score = 38.9 bits (89), Expect = 0.020
Identities = 67/259 (25%), Positives = 102/259 (39%), Gaps = 49/259 (18%)
Query: 221 QIEGLKLLQKTRKPKQDDDKRVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTS 280
Q G K L+ + Q +R+ + I L D D ++ L+K ++T
Sbjct: 204 QSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVKGFLLRDRGSDVES-----LDKLMKTK 258
Query: 281 SMPEQAHKVCVKE-----IKRLKKMPQSMPEYALTRNYLELMVELPWNK----------- 324
++PE AH+ K + + + Q + +L R L L V L +
Sbjct: 259 NIPE-AHQDAFKTGFAEGFLKAQALTQKTND-SLRRTRLILFVLLLFGIYGLLKNPFLSV 316
Query: 325 --STTDRLDIRAARILLDNDHY----AMEKLKKRVLEYLAVRQLKNNLKGPIL------- 371
TT LD + + N + +E+ K+ + E V LKN K IL
Sbjct: 317 RFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQE--VVEFLKNPQKFTILGGKLPKG 374
Query: 372 -CFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLK 430
VGPPG GKT + R+VA F+ A G D+ +VG RI N +
Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFY-YASGSEFDE--------MFVGVGASRIRNLFR 425
Query: 431 TVGVNNP-VFLLDEVDKLG 448
N P V +DE+D +G
Sbjct: 426 EAKANAPCVIFIDELDSVG 444
>gi|7657689 YME1-like 1 isoform 3 [Homo sapiens]
Length = 716
Score = 38.9 bits (89), Expect = 0.020
Identities = 67/259 (25%), Positives = 102/259 (39%), Gaps = 49/259 (18%)
Query: 221 QIEGLKLLQKTRKPKQDDDKRVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTS 280
Q G K L+ + Q +R+ + I L D D ++ L+K ++T
Sbjct: 147 QSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVKGFLLRDRGSDVES-----LDKLMKTK 201
Query: 281 SMPEQAHKVCVKE-----IKRLKKMPQSMPEYALTRNYLELMVELPWNK----------- 324
++PE AH+ K + + + Q + +L R L L V L +
Sbjct: 202 NIPE-AHQDAFKTGFAEGFLKAQALTQKTND-SLRRTRLILFVLLLFGIYGLLKNPFLSV 259
Query: 325 --STTDRLDIRAARILLDNDHY----AMEKLKKRVLEYLAVRQLKNNLKGPIL------- 371
TT LD + + N + +E+ K+ + E V LKN K IL
Sbjct: 260 RFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQE--VVEFLKNPQKFTILGGKLPKG 317
Query: 372 -CFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLK 430
VGPPG GKT + R+VA F+ A G D+ +VG RI N +
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFY-YASGSEFDE--------MFVGVGASRIRNLFR 368
Query: 431 TVGVNNP-VFLLDEVDKLG 448
N P V +DE+D +G
Sbjct: 369 EAKANAPCVIFIDELDSVG 387
>gi|42740903 MTERF domain containing 2 [Homo sapiens]
Length = 381
Score = 37.7 bits (86), Expect = 0.045
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 43/179 (24%)
Query: 111 VQVLKEKPYPIAEVEQLDR-LEEFPNTCKMREELGELSEQF-YKYA--------VQLVEM 160
V++LKEK + V+Q+ + L P+ +RE+LG+L +F Y Y + E
Sbjct: 198 VRLLKEKC--LFTVQQVTKILHSCPSV--LREDLGQLEYKFQYAYFRMGIKHPDIVKSEY 253
Query: 161 LDMSVPAVAKLRRLLDSLPREALPD----------ILTSIIRTSNKEKLQILDAVSLEER 210
L S+ + + L+ L R PD +L I+R S E L S+EE
Sbjct: 254 LQYSLTKIKQRHIYLERLGRYQTPDKKGQTQIPNPLLKDILRVSEAEFLARTACTSVEE- 312
Query: 211 FKMTIPLLVRQIEGLKLLQKTRKPKQDDDKRVIAIRPIRRITHISGTLEDEDEDEDNDD 269
F++ LL R+ ++ + DDKR ED+D++EDND+
Sbjct: 313 FQVFKKLLARE-------EEESESSTSDDKRASLDED-----------EDDDDEEDNDE 353
>gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens]
Length = 403
Score = 37.4 bits (85), Expect = 0.059
Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 36/174 (20%)
Query: 375 GPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGV 434
GPPG GKT + R+VA L F ++ + D+ Y+G I
Sbjct: 188 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK---------YIGESARLIREMFNYARD 238
Query: 435 NNP-VFLLDEVDKL-------GKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVL 486
+ P + +DE+D + G S + L+E+L+ + L +V
Sbjct: 239 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD----------TLHRVK 288
Query: 487 FIATANTTATIPAAL-----LDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
I N T+ AL LDR I +P ++ +++I H P + +HG
Sbjct: 289 MIMATNRPDTLDPALLRPGRLDRKIHIDLP--NEQARLDILKIHAGP--ITKHG 338
>gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2
[Homo sapiens]
Length = 638
Score = 36.2 bits (82), Expect = 0.13
Identities = 45/199 (22%), Positives = 73/199 (36%), Gaps = 35/199 (17%)
Query: 138 KMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKE 197
++R +L E ++QF L E ++ L L E DI+ S++R +
Sbjct: 23 ELRSQLAESNQQFR----DLKEKFLITQATAYSLANQLKKYKCEEYKDIIDSVLRDELQS 78
Query: 198 KLQILDAVSLEERFKMTIPLLVRQIEGLKLLQ-----------------KTRKPKQDDDK 240
++ + + E + L+ Q + L L+ KT D DK
Sbjct: 79 MEKLAEKLRQAEELRQYKALVHSQAKELTQLREKLREGRDASRWLNKHLKTLLTPDDPDK 138
Query: 241 R---------VIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCV 291
R + H DEDEDED DD +K++ S P + K
Sbjct: 139 SQGQDLREQLAEGHRLAEHLVHKLSPENDEDEDEDEDDKDEEVEKVQESPAPREVQKTEE 198
Query: 292 KEIKRLKKMPQSMPEYALT 310
KE+ + S+ E A+T
Sbjct: 199 KEVPQ-----DSLEECAVT 212
>gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1
[Homo sapiens]
Length = 667
Score = 36.2 bits (82), Expect = 0.13
Identities = 45/199 (22%), Positives = 73/199 (36%), Gaps = 35/199 (17%)
Query: 138 KMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKE 197
++R +L E ++QF L E ++ L L E DI+ S++R +
Sbjct: 23 ELRSQLAESNQQFR----DLKEKFLITQATAYSLANQLKKYKCEEYKDIIDSVLRDELQS 78
Query: 198 KLQILDAVSLEERFKMTIPLLVRQIEGLKLLQ-----------------KTRKPKQDDDK 240
++ + + E + L+ Q + L L+ KT D DK
Sbjct: 79 MEKLAEKLRQAEELRQYKALVHSQAKELTQLREKLREGRDASRWLNKHLKTLLTPDDPDK 138
Query: 241 R---------VIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCV 291
R + H DEDEDED DD +K++ S P + K
Sbjct: 139 SQGQDLREQLAEGHRLAEHLVHKLSPENDEDEDEDEDDKDEEVEKVQESPAPREVQKTEE 198
Query: 292 KEIKRLKKMPQSMPEYALT 310
KE+ + S+ E A+T
Sbjct: 199 KEVPQ-----DSLEECAVT 212
>gi|221218991 neuroblastoma breakpoint family, member 4 [Homo
sapiens]
Length = 638
Score = 36.2 bits (82), Expect = 0.13
Identities = 45/199 (22%), Positives = 73/199 (36%), Gaps = 35/199 (17%)
Query: 138 KMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKE 197
++R +L E ++QF L E ++ L L E DI+ S++R +
Sbjct: 23 ELRSQLAESNQQFR----DLKEKFLITQATAYSLANQLKKYKCEEYKDIIDSVLRDELQS 78
Query: 198 KLQILDAVSLEERFKMTIPLLVRQIEGLKLLQ-----------------KTRKPKQDDDK 240
++ + + E + L+ Q + L L+ KT D DK
Sbjct: 79 MEKLAEKLRQAEELRQYKALVHSQAKELTQLREKLREGRDASRWLNKHLKTLLTPDDPDK 138
Query: 241 R---------VIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCV 291
R + H DEDEDED DD +K++ S P + K
Sbjct: 139 SQGQDLREQLAEGHRLAEHLVHKLSPENDEDEDEDEDDKDEEVEKVQESPAPREVQKTEE 198
Query: 292 KEIKRLKKMPQSMPEYALT 310
KE+ + S+ E A+T
Sbjct: 199 KEVPQ-----DSLEECAVT 212
>gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens]
Length = 795
Score = 35.8 bits (81), Expect = 0.17
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 37/181 (20%)
Query: 367 KGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRII 426
KG +L +GPPG GKT + ++VA F +A+ G + ++ G G R+
Sbjct: 343 KGALL--LGPPGCGKTLLAKAVATEAQVPF--LAMAGP-EFVEVIG------GLGAARVR 391
Query: 427 NGLKTVGVNNP-VFLLDEVDKLGK----SLQG----DPAAALLEVLDPEQNHNFTDHYLN 477
+ K P + +DE+D +GK ++ G + L ++L TDH
Sbjct: 392 SLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDH--- 448
Query: 478 VAFDLSQVLFIATANTTATIPAAL-----LDRMEIIQVPGYTQEEKIEIAHRHLIPKQLE 532
V+ +A+ N + AL LDR I +P T +E+ EI +HL +L
Sbjct: 449 -------VIVLASTNRADILDGALMRPGRLDRHVFIDLP--TLQERREIFEQHLKSLKLT 499
Query: 533 Q 533
Q
Sbjct: 500 Q 500
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 35.8 bits (81), Expect = 0.17
Identities = 31/164 (18%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 170 KLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGLKLLQ 229
K ++ + ++ L I S + + NKE+ D L ++ + ++ L+
Sbjct: 239 KKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEK------------LDKKSQAMEELK 286
Query: 230 KTRKPKQDDDKRVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKV 289
R+ +++ ++A + + + + +DE+E+ED+ ++ RTSS E+ K
Sbjct: 287 AEREKRKNRTAELLAKKQPLKTSEVYS--DDEEEEEDDKSSEKSDRSSRTSSSDEEEEKE 344
Query: 290 CVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTDRLDIR 333
+ + +P+ + L+R+ LE +P+ T +R
Sbjct: 345 EIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVR 388
>gi|13540606 caseinolytic peptidase B [Homo sapiens]
Length = 707
Score = 35.8 bits (81), Expect = 0.17
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 19/180 (10%)
Query: 370 ILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIIN-- 427
+ F+G G+GKT + + AK + ++ + + + R ++GS PG + +
Sbjct: 376 VFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEE 435
Query: 428 ----GLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLS 483
K N V L DEVDK D +L++ D TD D
Sbjct: 436 GGQLTKKLKQCPNAVVLFDEVDK----AHPDVLTIMLQLFD---EGRLTDG-KGKTIDCK 487
Query: 484 QVLFIATANTTATIPA--ALLDRMEIIQVPGYTQEEK---IEIAHRHLIPKQLEQHGLTP 538
+FI T+N + A AL R E +++ E ++I+ + I K +++ + P
Sbjct: 488 DAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISDKITISKNFKENVIRP 547
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 35.0 bits (79), Expect = 0.29
Identities = 66/289 (22%), Positives = 112/289 (38%), Gaps = 46/289 (15%)
Query: 108 FQIVQVLKEKPYPIAE-VEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVP 166
F+ +V + +P ++E +E+ E P K E+ +LSE
Sbjct: 769 FEASEVPETEPEAVSEPIEETTVETEIPKGSKEGLEIEKLSETV---------------- 812
Query: 167 AVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGLK 226
+L P ++ PD+ K +I + L ++ + TI +I L+
Sbjct: 813 -------VLPEFPEDSYPDV-----PEMEPFKEKIGSFIILWKQLEATISEAYIKILNLE 860
Query: 227 LLQKTRKPKQDDDKRVIAIRPIRRITHISGTLED-EDEDEDNDDIVMLEKKIRTSSMPEQ 285
+ +T P++ K V + + T T ED E+E ED +++++ E
Sbjct: 861 IADRT--PQELLQKVVETMEKPFQYTAWELTGEDYEEETEDYQTEAEVDEELEEEEEEEG 918
Query: 286 AHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTDRLDIRAARILLDNDHYA 345
K+ KE KR + L N++ T+ +I + A
Sbjct: 919 EDKM--KERKRHLGDTKHFCPVVLKENFI-------LQPGNTEEAAKYREKIYYFSSAEA 969
Query: 346 MEKLKKRVLEYLAVRQLKNNLKGPIL--CFVGPPGVGKTSVGRSVAKTL 392
EK + +Y+A + LK P L C VGP G GKT GR +A+ L
Sbjct: 970 KEKFLEHPEDYVAHEE---PLKAPPLRICLVGPQGSGKTMCGRQLAEKL 1015
Score = 30.8 bits (68), Expect = 5.6
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 347 EKLKKRVLEYLAVRQLKNNLKGPI-LCFVGPPGVGKTSVGRSVAKTLGREFHRIALGG 403
EK K ++Y +RQ K PI + VGPP GKT+V + + G +++GG
Sbjct: 1391 EKFMKNPIKY--IRQPKPKPTVPIRIIIVGPPKSGKTTVAKKITSEYG--LKHLSIGG 1444
>gi|156564401 vesicle-fusing ATPase [Homo sapiens]
Length = 744
Score = 34.7 bits (78), Expect = 0.39
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 14/187 (7%)
Query: 365 NLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGR 424
++KG +L GPPG GKT + R + K L ++ G + G + +
Sbjct: 252 HVKGILL--YGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYV-GESEANIRKLFAD 308
Query: 425 IINGLKTVGVNN--PVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDL 482
+ +G N+ + + DE+D + K Q A V D N + ++ L
Sbjct: 309 AEEEQRRLGANSGLHIIIFDEIDAICK--QRGSMAGSTGVHDTVVNQLLSK--IDGVEQL 364
Query: 483 SQVLFIATANTTATIPAALL--DRMEIIQVPGYTQEE-KIEIAHRHLIPKQLEQHGLTPQ 539
+ +L I N I ALL R+E+ G E+ +++I H H ++ H L
Sbjct: 365 NNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIH--TARMRGHQLLSA 422
Query: 540 QIQIPQV 546
+ I ++
Sbjct: 423 DVDIKEL 429
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 34.7 bits (78), Expect = 0.39
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 366 LKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRG 412
LK PIL G PGVGKTS+ ++AK G RI L D +D+ G
Sbjct: 1745 LKKPIL-LEGSPGVGKTSLVGALAKASGNTLVRINLSEQTDITDLFG 1790
Score = 33.9 bits (76), Expect = 0.66
Identities = 72/321 (22%), Positives = 118/321 (36%), Gaps = 57/321 (17%)
Query: 267 NDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKST 326
ND ++L ++R + +V K K+ K PQS+ N L+L+ +L ST
Sbjct: 1300 NDGYMLLAGRVRKQEEIDVIQEVLEKHFKK-KLCPQSLFS---KENVLKLLGKLSTQIST 1355
Query: 327 TDRLDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGR 386
L+ I+ + L R LE+ G + VG G GKT++ +
Sbjct: 1356 ---LECNFGHIVWTEGMRRLAMLVGRALEF-----------GEPVLLVGDTGCGKTTICQ 1401
Query: 387 SVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMP----------------GRIINGLK 430
A ++ + ++ + SD G R V P G ++ +K
Sbjct: 1402 VFAALANQKLYSVSCHLHMETSDFLGGLRP-VRQKPNDKEEIDTSRLFEWHDGPLVQAMK 1460
Query: 431 TVGVNNPVFLLDEV--------DKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDL 482
G FLLDE+ ++L L+ + + L E PE D + +
Sbjct: 1461 EDG----FFLLDEISLADDSVLERLNSVLEVEKSLVLAEKGSPEDK----DSEIELLTAG 1512
Query: 483 SQVLFIATANT-----TATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLT 537
+ +AT N + AL +R I P T E + H + L +
Sbjct: 1513 KKFRILATMNPGGDFGKKELSPALRNRFTEIWCPQSTSREDLIQIISHNLRPGLCLGRID 1572
Query: 538 PQQIQIPQVTTLDIITRYTRE 558
P+ IP+V LD I T +
Sbjct: 1573 PKGSDIPEV-MLDFIDWLTHQ 1592
>gi|113426932 PREDICTED: similar to N-ethylmaleimide-sensitive
factor [Homo sapiens]
Length = 563
Score = 34.3 bits (77), Expect = 0.50
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 14/187 (7%)
Query: 365 NLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGR 424
++KG +L GPPG GKT + R + K L ++ G + G + +
Sbjct: 325 HVKGILL--YGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYV-GESEANIRKLFAD 381
Query: 425 IINGLKTVGVNN--PVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDL 482
+ +G N+ + + DE+D + K Q A V D N + ++ L
Sbjct: 382 AEEEQRRLGANSGLHIIIFDEIDAICK--QRGSMAGSTGVHDTVVNQLLSK--IDGMEQL 437
Query: 483 SQVLFIATANTTATIPAALL--DRMEIIQVPGYTQEE-KIEIAHRHLIPKQLEQHGLTPQ 539
+ +L I N I ALL R+E+ G E+ +++I H H ++ H L
Sbjct: 438 NNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIH--TARMRGHQLLSA 495
Query: 540 QIQIPQV 546
+ I ++
Sbjct: 496 DVDIKEL 502
>gi|31742536 fidgetin-like 1 [Homo sapiens]
Length = 674
Score = 34.3 bits (77), Expect = 0.50
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Query: 344 YAMEKLKKRVLEYLAVRQLKNNLKGP---ILCFVGPPGVGKTSVGRSVAKTLGREFHRIA 400
+A +K+ V+ + + L+GP IL F GPPG GKT +G+ +A G F I+
Sbjct: 408 FAKATIKEIVVWPMLRPDIFTGLRGPPKGILLF-GPPGTGKTLIGKCIASQSGATFFSIS 466
Query: 401 LGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNP-VFLLDEVDKLGKSLQGD 454
+ + +VG + P V +DE+D L S +GD
Sbjct: 467 ASSLTSK---------WVGEGEKMVRALFAVARCQQPAVIFIDEIDSL-LSQRGD 511
>gi|112789543 fidgetin-like 1 [Homo sapiens]
Length = 674
Score = 34.3 bits (77), Expect = 0.50
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Query: 344 YAMEKLKKRVLEYLAVRQLKNNLKGP---ILCFVGPPGVGKTSVGRSVAKTLGREFHRIA 400
+A +K+ V+ + + L+GP IL F GPPG GKT +G+ +A G F I+
Sbjct: 408 FAKATIKEIVVWPMLRPDIFTGLRGPPKGILLF-GPPGTGKTLIGKCIASQSGATFFSIS 466
Query: 401 LGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNP-VFLLDEVDKLGKSLQGD 454
+ + +VG + P V +DE+D L S +GD
Sbjct: 467 ASSLTSK---------WVGEGEKMVRALFAVARCQQPAVIFIDEIDSL-LSQRGD 511
>gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens]
Length = 753
Score = 33.9 bits (76), Expect = 0.66
Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 28/155 (18%)
Query: 375 GPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGV 434
GPPGVGKT + R+VA+ G E ++ ++G R R+ + +
Sbjct: 241 GPPGVGKTQLVRAVAREAGAELLAVSAPA------LQGSRPGETEENVRRVFQRARELAS 294
Query: 435 NNPVFL-LDEVDKL-----GKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFI 488
P L LDE+D L ++ + A +L +LD + D V+
Sbjct: 295 RGPSLLFLDEMDALCPQRGSRAPESRVVAQVLTLLD------------GASGDREVVVVG 342
Query: 489 ATANTTATIPA----ALLDRMEIIQVPGYTQEEKI 519
AT A PA DR +I P Q ++I
Sbjct: 343 ATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEI 377
>gi|194306571 replication factor C 5 isoform 2 [Homo sapiens]
Length = 319
Score = 33.9 bits (76), Expect = 0.66
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
+++ N + P L GPPG GKTS + AK L +EF + L + SD RG
Sbjct: 23 IQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVL--ELNASDDRG---- 76
Query: 417 YVGSMPGRIINGLKTVGVNNPVF---LLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTD 473
+ + G I++ T + F +LDE D + + Q AL V++ FT+
Sbjct: 77 -IDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQN----ALRRVIE-----KFTE 126
Query: 474 H--YLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIA 522
+ + + LS+++ + T L + + ++ +EEK++I+
Sbjct: 127 NTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDIS 177
>gi|194306567 replication factor C 5 isoform 2 [Homo sapiens]
Length = 319
Score = 33.9 bits (76), Expect = 0.66
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
+++ N + P L GPPG GKTS + AK L +EF + L + SD RG
Sbjct: 23 IQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVL--ELNASDDRG---- 76
Query: 417 YVGSMPGRIINGLKTVGVNNPVF---LLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTD 473
+ + G I++ T + F +LDE D + + Q AL V++ FT+
Sbjct: 77 -IDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQN----ALRRVIE-----KFTE 126
Query: 474 H--YLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIA 522
+ + + LS+++ + T L + + ++ +EEK++I+
Sbjct: 127 NTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDIS 177
>gi|6677723 replication factor C 5 isoform 1 [Homo sapiens]
Length = 340
Score = 33.9 bits (76), Expect = 0.66
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
+++ N + P L GPPG GKTS + AK L +EF + L + SD RG
Sbjct: 44 IQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVL--ELNASDDRG---- 97
Query: 417 YVGSMPGRIINGLKTVGVNNPVF---LLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTD 473
+ + G I++ T + F +LDE D + + Q AL V++ FT+
Sbjct: 98 -IDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQN----ALRRVIE-----KFTE 147
Query: 474 H--YLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIA 522
+ + + LS+++ + T L + + ++ +EEK++I+
Sbjct: 148 NTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDIS 198
>gi|64084766 fidgetin [Homo sapiens]
Length = 759
Score = 33.5 bits (75), Expect = 0.86
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 370 ILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGV 404
IL F GP G GKT +GR +A LG F +IA G+
Sbjct: 522 ILLF-GPRGTGKTLLGRCIASQLGATFFKIAGSGL 555
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 32.7 bits (73), Expect = 1.5
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 13/160 (8%)
Query: 172 RRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLE-ERFKMT-----IPLLVRQIEGL 225
R+LL+ R L I+T + N+ + LD V E + T + ++E +
Sbjct: 812 RQLLNE--RIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELEAI 869
Query: 226 KLLQKTRKPKQDD-----DKRVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTS 280
K + +D DK I+ +++ +E E D N D LEK
Sbjct: 870 NKRVKDTMARSEDLDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQ 929
Query: 281 SMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVEL 320
M + + C+K+I+ L +PQ E T + +L +L
Sbjct: 930 GMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKL 969
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 32.7 bits (73), Expect = 1.5
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 475 YLNVAFDLSQVLFIATANTTATIPAALLDRMEII---QVPGYTQEEKIEIAHRHLIPKQL 531
Y V +L+Q+ + A ++ ++ + +++I + EEKI HL K++
Sbjct: 709 YSKVLNELTQLKQLVDAQKENSV--SITEHLQVITTLRTAAKEMEEKISNLKEHLASKEV 766
Query: 532 EQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAV--AVKVAEGQHKEAKL 589
E L Q ++ T ++ R + E SL+ ++ + + +VK E H E
Sbjct: 767 EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQ 826
Query: 590 DRSDVTEREGCREHI 604
RS+V++ + +E+I
Sbjct: 827 IRSEVSQVKREKENI 841
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 32.7 bits (73), Expect = 1.5
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 475 YLNVAFDLSQVLFIATANTTATIPAALLDRMEII---QVPGYTQEEKIEIAHRHLIPKQL 531
Y V +L+Q+ + A ++ ++ + +++I + EEKI HL K++
Sbjct: 698 YSKVLNELTQLKQLVDAQKENSV--SITEHLQVITTLRTAAKEMEEKISNLKEHLASKEV 755
Query: 532 EQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAV--AVKVAEGQHKEAKL 589
E L Q ++ T ++ R + E SL+ ++ + + +VK E H E
Sbjct: 756 EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQ 815
Query: 590 DRSDVTEREGCREHI 604
RS+V++ + +E+I
Sbjct: 816 IRSEVSQVKREKENI 830
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 32.7 bits (73), Expect = 1.5
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 475 YLNVAFDLSQVLFIATANTTATIPAALLDRMEII---QVPGYTQEEKIEIAHRHLIPKQL 531
Y V +L+Q+ + A ++ ++ + +++I + EEKI HL K++
Sbjct: 677 YSKVLNELTQLKQLVDAQKENSV--SITEHLQVITTLRTAAKEMEEKISNLKEHLASKEV 734
Query: 532 EQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAV--AVKVAEGQHKEAKL 589
E L Q ++ T ++ R + E SL+ ++ + + +VK E H E
Sbjct: 735 EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQ 794
Query: 590 DRSDVTEREGCREHI 604
RS+V++ + +E+I
Sbjct: 795 IRSEVSQVKREKENI 809
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 32.7 bits (73), Expect = 1.5
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 475 YLNVAFDLSQVLFIATANTTATIPAALLDRMEII---QVPGYTQEEKIEIAHRHLIPKQL 531
Y V +L+Q+ + A ++ ++ + +++I + EEKI HL K++
Sbjct: 706 YSKVLNELTQLKQLVDAQKENSV--SITEHLQVITTLRTAAKEMEEKISNLKEHLASKEV 763
Query: 532 EQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAV--AVKVAEGQHKEAKL 589
E L Q ++ T ++ R + E SL+ ++ + + +VK E H E
Sbjct: 764 EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQ 823
Query: 590 DRSDVTEREGCREHI 604
RS+V++ + +E+I
Sbjct: 824 IRSEVSQVKREKENI 838
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,816,363
Number of Sequences: 37866
Number of extensions: 1432133
Number of successful extensions: 5059
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 4984
Number of HSP's gapped (non-prelim): 99
length of query: 852
length of database: 18,247,518
effective HSP length: 111
effective length of query: 741
effective length of database: 14,044,392
effective search space: 10406894472
effective search space used: 10406894472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.