Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 31377566
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377566 ring finger protein 168 [Homo sapiens]
(571 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377566 ring finger protein 168 [Homo sapiens] 1157 0.0
gi|148839382 ring finger protein 169 [Homo sapiens] 99 8e-21
gi|15208660 tripartite motif protein 21 [Homo sapiens] 60 4e-09
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 57 3e-08
gi|87080813 LON peptidase N-terminal domain and ring finger 1 [H... 56 1e-07
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 54 3e-07
gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo s... 54 3e-07
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa... 54 4e-07
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa... 54 4e-07
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 54 4e-07
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 54 4e-07
gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s... 54 5e-07
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa... 52 1e-06
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa... 52 1e-06
gi|148528975 LON peptidase N-terminal domain and ring finger 2 [... 52 1e-06
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 52 1e-06
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 52 1e-06
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa... 51 3e-06
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa... 51 3e-06
gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa... 51 3e-06
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap... 51 3e-06
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 51 3e-06
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 51 3e-06
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 51 3e-06
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 51 3e-06
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 50 7e-06
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 50 7e-06
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 50 7e-06
gi|116174778 centrosome spindle pole associated protein 1 isofor... 49 1e-05
gi|116174789 centrosome spindle pole associated protein 1 isofor... 49 1e-05
>gi|31377566 ring finger protein 168 [Homo sapiens]
Length = 571
Score = 1157 bits (2994), Expect = 0.0
Identities = 571/571 (100%), Positives = 571/571 (100%)
Query: 1 MALPKDAIPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 60
MALPKDAIPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS
Sbjct: 1 MALPKDAIPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 60
Query: 61 WTRYHTRRNSLVNVELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREY 120
WTRYHTRRNSLVNVELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREY
Sbjct: 61 WTRYHTRRNSLVNVELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREY 120
Query: 121 EEEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELAR 180
EEEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELAR
Sbjct: 121 EEEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELAR 180
Query: 181 KLSIDINNFCEGSISASPLNSRKSDPVTPKSEKKSKNKQRNTGDIQKYLTPKSQFGSASH 240
KLSIDINNFCEGSISASPLNSRKSDPVTPKSEKKSKNKQRNTGDIQKYLTPKSQFGSASH
Sbjct: 181 KLSIDINNFCEGSISASPLNSRKSDPVTPKSEKKSKNKQRNTGDIQKYLTPKSQFGSASH 240
Query: 241 SEAVQEVRKDSVSKDIDSSDRKSPTGQDTEIEDMPTLSPQISLGVGEQGADSSIESPMPW 300
SEAVQEVRKDSVSKDIDSSDRKSPTGQDTEIEDMPTLSPQISLGVGEQGADSSIESPMPW
Sbjct: 241 SEAVQEVRKDSVSKDIDSSDRKSPTGQDTEIEDMPTLSPQISLGVGEQGADSSIESPMPW 300
Query: 301 LCACGAEWYHEGNVKTRPSNHGKELCVLSHERPKTRVPYSKETAVMPCGRTESGCAPTSG 360
LCACGAEWYHEGNVKTRPSNHGKELCVLSHERPKTRVPYSKETAVMPCGRTESGCAPTSG
Sbjct: 301 LCACGAEWYHEGNVKTRPSNHGKELCVLSHERPKTRVPYSKETAVMPCGRTESGCAPTSG 360
Query: 361 VTQTNGNNTGETENEESCLLISKEISKRKNQESSFEAVKDPCFSAKRRKVSPESSPDQEE 420
VTQTNGNNTGETENEESCLLISKEISKRKNQESSFEAVKDPCFSAKRRKVSPESSPDQEE
Sbjct: 361 VTQTNGNNTGETENEESCLLISKEISKRKNQESSFEAVKDPCFSAKRRKVSPESSPDQEE 420
Query: 421 TEINFTQKLIDLEHLLFERHKQEEQDRLLALQLQKEVDKEQMVPNRQKGSPDEYHLRATS 480
TEINFTQKLIDLEHLLFERHKQEEQDRLLALQLQKEVDKEQMVPNRQKGSPDEYHLRATS
Sbjct: 421 TEINFTQKLIDLEHLLFERHKQEEQDRLLALQLQKEVDKEQMVPNRQKGSPDEYHLRATS 480
Query: 481 SPPDKVLNGQRKNPKDGNFKRQTHTKHPTPERGSRDKNRQVSLKMQLKQSVNRRKMPNST 540
SPPDKVLNGQRKNPKDGNFKRQTHTKHPTPERGSRDKNRQVSLKMQLKQSVNRRKMPNST
Sbjct: 481 SPPDKVLNGQRKNPKDGNFKRQTHTKHPTPERGSRDKNRQVSLKMQLKQSVNRRKMPNST 540
Query: 541 RDHCKVSKSAHSLQPSISQKSVFQMFQRCTK 571
RDHCKVSKSAHSLQPSISQKSVFQMFQRCTK
Sbjct: 541 RDHCKVSKSAHSLQPSISQKSVFQMFQRCTK 571
>gi|148839382 ring finger protein 169 [Homo sapiens]
Length = 708
Score = 99.4 bits (246), Expect = 8e-21
Identities = 111/429 (25%), Positives = 167/429 (38%), Gaps = 55/429 (12%)
Query: 9 PSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRR 68
P E C C+E E LPC H+LC+ C Q + A CP CR R W R R
Sbjct: 61 PRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARD 120
Query: 69 NSLVNVE-LWTIIQKHYPRECKLRASG--------QESEEVADDYQPVRL------LSKP 113
+ + E L ++ P C+ R G E E A +P + LSKP
Sbjct: 121 DGQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRAAPAEPDFIFRAPIKLSKP 180
Query: 114 GELRREYEEEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLK 173
GELR EYE + R + +E K SE+ I +LL E+ E KR+ M+EQ K
Sbjct: 181 GELREEYES-----LRKLREEKLQEEKPSEDQIHKLLPEDTETGKRK-------MDEQKK 228
Query: 174 SDEELARKLSIDINNFCEGSISASPLN--SRKSDPVTPKSEKKSKNKQRNTGDIQKYLTP 231
DE L K +++ C +S S SR T +S SKN + + L
Sbjct: 229 RDEPLVLKTNLE---RCPARLSDSENEEPSRGQMTQTHRSAFVSKNNSYSLAFLAGKLNS 285
Query: 232 KSQFGSASHSEAVQEVRKDSVSKDIDSSDRKSPTGQDTEIEDM-PTLSPQISLGVGEQ-- 288
K + S S S+ QE K V ++ G ++ M P +P I + + Q
Sbjct: 286 KVE-RSQSCSDTAQERAKSRV---------RAVPGNKAKVTTMTPASNPIIGVLLSTQNN 335
Query: 289 ----GADSSIESPMPWLCACGAEWYHEGNVKTRPSNHGKELCVLSHERPKTRVPYSKETA 344
D +IE +P+ H+ P ++ L+H +P P +
Sbjct: 336 RCVSAPDLTIEKRLPFSSLSSLASLHKPERSVSPESNDSISEELNHFKPIVCSPCT---- 391
Query: 345 VMPCGRTESGCAPTSGVTQTNGNNTGETENEESCLLISKEISKRKNQESSFEAVKDPCFS 404
P R G + + ++ N + +++ S I K+ Q +K
Sbjct: 392 --PPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKKTLSK 449
Query: 405 AKRRKVSPE 413
A ++PE
Sbjct: 450 ATLTSLAPE 458
Score = 45.4 bits (106), Expect = 1e-04
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 438 ERHKQEEQDRLLALQLQKEVDKEQMVPNRQKGSPDEYHLRATS 480
++ +QEE+DR LALQLQ+ D E+ +R+KGS D+Y LR+++
Sbjct: 661 QKLQQEEEDRQLALQLQRMFDNERRTVSRRKGSVDQYLLRSSN 703
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 60.5 bits (145), Expect = 4e-09
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 48/228 (21%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRR--------------- 57
E C IC++ VEPV++ C H+ C+ C + CP CR+R
Sbjct: 13 EVTCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLKNLRPNRQLANM 72
Query: 58 ------VSSWTRYHTR--RNSLVNVELWTIIQKHYPRECKLRASGQES--------EEVA 101
+S R T+ R ++ L +K C + A ++ EE A
Sbjct: 73 VNNLKEISQEAREGTQGERCAVHGERLHLFCEKDGKALCWVCAQSRKHRDHAMVPLEEAA 132
Query: 102 DDYQPVRLLSKPGELRREYE--EEISKVAAERRAS-----EEEENKASEEYIQR--LLAE 152
+YQ +L GELRR+ E E++ A +RA E ++++ E++Q+ L E
Sbjct: 133 QEYQE-KLQVALGELRRKQELAEKLEVEIAIKRADWKKTVETQKSRIHAEFVQQKNFLVE 191
Query: 153 EEEEEKRQAEKRRRAM-------EEQLKSDEELARKLSIDINNFCEGS 193
EE+ + ++ EK R E +L + ++L +++ C S
Sbjct: 192 EEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQELISELDRRCHSS 239
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 57.4 bits (137), Expect = 3e-08
Identities = 112/472 (23%), Positives = 178/472 (37%), Gaps = 103/472 (21%)
Query: 87 ECKLRASGQESEE-VADDYQPVRLLSK-PGELRREYEEEISKVAAERRASEEEENKASEE 144
E + +A+ QE E A++ + +R K E R+ +EE + A ER+ +EEE +A+EE
Sbjct: 296 EAEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEE 355
Query: 145 YIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLSIDINNFCEGSISASPLNSRKS 204
QR+ +EEEKR AE+R+RA E +EE A+ N E A K
Sbjct: 356 R-QRI----KEEEKRAAEERQRARAE----EEEKAKVEEQKRNKQLEEKKHAMQETKIKG 406
Query: 205 DPVTPKSEKKSKNKQRNTGDIQKYLTPKSQFGSASHSEAVQEVRKDSVSKDIDSSDRKSP 264
+ V K E K N+++ D + K Q + +++ + +D P
Sbjct: 407 EKVEQKIEGKWVNEKKAQEDKLQTAVLKKQ---GEEKGTKVQAKREKLQED-------KP 456
Query: 265 TGQDTEIEDMPTLSPQISLGVGEQGADSSIESPMPWLCACGAEWYHEGNVKTRPSNHGKE 324
T + EI+D ++ ++S M +G + + N
Sbjct: 457 TFKKEEIKDEKIKK--------DKEPKEEVKSFMD---------RKKGFTEVKSQNGE-- 497
Query: 325 LCVLSHERPKTRVPYSKETAVMPCGRTESGCAPTSGVTQTNG--------NNTGETENEE 376
++H+ T +S+ P GR G Q GETE+EE
Sbjct: 498 --FMTHKLKHTENTFSR-----PGGRASVDTKEAEGAPQVEAGKRLEELRRRRGETESEE 550
Query: 377 SCLLISKEISKRKNQESSFEAVKDPCFSAKRRKVSPESSPDQEETEINFTQKLIDLEHLL 436
E K+K QE++ E + +RRKV E
Sbjct: 551 F------EKLKQKQQEAALELEELKKKREERRKVLEEEE--------------------- 583
Query: 437 FERHKQEEQDRLLALQLQKEVDKEQMVPNRQKGSPDEYHLRATSSPPDKVLNGQRKNPKD 496
+R KQEE DR L + +K KE++ R + + ++K P+D
Sbjct: 584 -QRRKQEEADRKLREEEEKRRLKEEIERRRAEAA-----------------EKRQKMPED 625
Query: 497 GNFKRQTHTKHPTPERGSRDKNRQVSLKMQLKQSVNRRKMPNSTRDHCKVSK 548
G + K TP+ S + L +SV + ST VSK
Sbjct: 626 GLSDDKKPFKCFTPKGSSLKIEERAEF---LNKSVQKSSGVKSTHQAAIVSK 674
Score = 43.9 bits (102), Expect = 4e-04
Identities = 85/435 (19%), Positives = 168/435 (38%), Gaps = 69/435 (15%)
Query: 115 ELRREYEEEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQL-- 172
ELRR+ EE+ ++ AER A + + ++EE+ E+RRRA +E+L
Sbjct: 9 ELRRQKREEM-RLEAERIAYQRND---------------DDEEEAARERRRRARQERLRQ 52
Query: 173 KSDEELARKLSIDINNFCEGSI-----SASPLNSR-KSDPVTPKSEKKSKNKQRNTGDIQ 226
K +EE +++ + + S+ + N++ + D E+ ++ ++R +Q
Sbjct: 53 KQEEESLGQVTDQVEVNAQNSVPDEEAKTTTTNTQVEGDDEAAFLERLARREERRQKRLQ 112
Query: 227 KYLTPKSQFG----SASHSEAVQEVRKDSVSKDIDSSDRKSPTGQDT-EIEDMPTLSPQI 281
+ L + +F AS S + ++ D+ + + KS + Q+ EIE+ T++
Sbjct: 113 EALERQKEFDPTITDASLSLPSRRMQNDTAENETTEKEEKSESRQERYEIEETETVTKSY 172
Query: 282 SLGVGEQGADSSIESPMPWLCACGAEWYHEGNVKTRPSNHGKELCVLSHERPKTRVPYSK 341
+W K +E E+PK
Sbjct: 173 QKN----------------------DWRDAEENKKEDKEKEEE----EEEKPKRGSIGEN 206
Query: 342 ETAVMPCGRTESGCAPTSGVTQTNGN-NTGETENEESCLLISKEISKRKNQESS----FE 396
+ VM +T T ++ NG ++ E + EE S EIS + E E
Sbjct: 207 QVEVMVEEKTTESQEETVVMSLKNGQISSEEPKQEEEREQGSDEISHHEKMEEEDKERAE 266
Query: 397 AVKDPCFSAKRRKVSPESSPD--QEETEINFTQKLIDLEHLLFERHKQEEQDRLLALQLQ 454
A + + +R ++ E E I +K E ER + EE++R+ + +
Sbjct: 267 AERARLEAEERERIKAEQDKKIADERARIEAEEKAAAQER---ERREAEERERMRE-EEK 322
Query: 455 KEVDKEQMVPNRQKGSPDEYHLRATSSPPDKVLNGQRKNPKDGNFKRQTHTKHPTPERGS 514
+ ++ Q + +K + +E R +K +R+ K+ + + E
Sbjct: 323 RAAEERQRIKEEEKRAAEE---RQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEE 379
Query: 515 RDKNRQVSLKMQLKQ 529
+ K + QL++
Sbjct: 380 KAKVEEQKRNKQLEE 394
Score = 31.6 bits (70), Expect = 2.1
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 21/212 (9%)
Query: 119 EYEEEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRR-RAMEEQLKSDEE 177
E + + ++ R +E EE + ++ Q E EE +K++ E+R+ EEQ + EE
Sbjct: 531 EAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEE 590
Query: 178 LARKLSIDINNFCEGSISASPLNSRKSDPVTPKSEKKSKNKQRNTGDIQKYLTPKSQFGS 237
RKL + E + R+++ +EK+ K + D +K P F
Sbjct: 591 ADRKLREEE----EKRRLKEEIERRRAE----AAEKRQKMPEDGLSDDKK---PFKCFTP 639
Query: 238 ASHSEAVQEVRKDSVSKDIDSSDRKSPTGQ-------DTEIEDMPTLSPQISLGVGEQGA 290
S ++E R + ++K + S T Q D+ +E + + A
Sbjct: 640 KGSSLKIEE-RAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPA 698
Query: 291 DSSIESPMPWLCACGAEWYHEGNVKTRPSNHG 322
S + P + + W +GNV + P+ G
Sbjct: 699 ASDLPVPAEGVRNIKSMW-EKGNVFSSPTAAG 729
>gi|87080813 LON peptidase N-terminal domain and ring finger 1 [Homo
sapiens]
Length = 773
Score = 55.8 bits (133), Expect = 1e-07
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 3 LPKDAIPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWT 62
+P++ I +S+ +C +CM + EPVT PC H+ CK C + ++ A CP C+ S
Sbjct: 467 IPEELI-DVSDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPY-CPLCK---ESLK 521
Query: 63 RYHTRRNSLVNVELWTIIQKHYPRECKLRASGQESE 98
Y R V L +I K+ P E R + E
Sbjct: 522 EYLADRRYCVTQLLEELIVKYLPDELSERKKIYDEE 557
Score = 37.0 bits (84), Expect = 0.049
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 21/154 (13%)
Query: 15 QCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSL--- 71
+C C L EPVT+PC H+ C+ C + + C CR R+ T T
Sbjct: 122 RCLGCRGFLSEPVTVPCGHSYCRRCLRRELRAR---CRLCRDRLPPATASATDAEGTAPR 178
Query: 72 --------------VNVELWTIIQKHYP-RECKLRASGQESEEVADDYQPVRLLSKPGEL 116
+V L + +K +P + + RA+G+ E + L + L
Sbjct: 179 PPPLAAAIAASDFRTSVVLNHLAEKWFPGQRERARAAGRLGELLHQGRYREALAAACEAL 238
Query: 117 RREYEEEISKVAAERRASEEEENKASEEYIQRLL 150
R E + I K+ + +E KA+ E + +L
Sbjct: 239 RAEPSDLIVKIYRAESYAGLQEFKAAIEDLNAVL 272
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 54.3 bits (129), Expect = 3e-07
Identities = 64/273 (23%), Positives = 107/273 (39%), Gaps = 75/273 (27%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCF-----QSTVEKASLCCPFCRRRVSSWTRYHTR 67
E C IC+E+L +P++L C H+ C+ C +S ++K CP CR +
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRIS-------YQP 64
Query: 68 RNSLVNVELWTIIQKHYPRECKLRASGQE------------------------------- 96
N N + I++K RE KL GQ+
Sbjct: 65 ENIRPNRHVANIVEK--LREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122
Query: 97 --------SEEVADDYQPVRLLSKPGELRREYE--EEISKVAAERRAS-------EEEEN 139
+EEVA +YQ V+L + LR++ + EE+ E +AS ++
Sbjct: 123 HRGHHTFLTEEVAQEYQ-VKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNV 181
Query: 140 KASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDE-------ELARKLSIDINNFCEG 192
A E ++ +L EE E + EK + + L + E + R+L D+ + +G
Sbjct: 182 LADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQG 241
Query: 193 SI-----SASPLNSRKSDPVTPKSEKKSKNKQR 220
S+ + R + K E KN++R
Sbjct: 242 SVMELLQGVDGVIKRTENVTLKKPETFPKNQRR 274
>gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo
sapiens]
Length = 347
Score = 54.3 bits (129), Expect = 3e-07
Identities = 64/273 (23%), Positives = 107/273 (39%), Gaps = 75/273 (27%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCF-----QSTVEKASLCCPFCRRRVSSWTRYHTR 67
E C IC+E+L +P++L C H+ C+ C +S ++K CP CR +
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRIS-------YQP 64
Query: 68 RNSLVNVELWTIIQKHYPRECKLRASGQE------------------------------- 96
N N + I++K RE KL GQ+
Sbjct: 65 ENIRPNRHVANIVEK--LREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122
Query: 97 --------SEEVADDYQPVRLLSKPGELRREYE--EEISKVAAERRAS-------EEEEN 139
+EEVA +YQ V+L + LR++ + EE+ E +AS ++
Sbjct: 123 HRGHHTFLTEEVAQEYQ-VKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNV 181
Query: 140 KASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDE-------ELARKLSIDINNFCEG 192
A E ++ +L EE E + EK + + L + E + R+L D+ + +G
Sbjct: 182 LADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQG 241
Query: 193 SI-----SASPLNSRKSDPVTPKSEKKSKNKQR 220
S+ + R + K E KN++R
Sbjct: 242 SVMELLQGVDGVIKRTENVTLKKPETFPKNQRR 274
>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
sapiens]
Length = 1268
Score = 53.9 bits (128), Expect = 4e-07
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 92 ASGQESEEVADDYQPVRLLSKPGE--LRREYEE----EISKVAAERRASEEEENKASEEY 145
+ +E EE D +P +L+ PGE LRR++ + A RR E++ + +EE+
Sbjct: 324 SGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEH 383
Query: 146 IQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLSIDINNFCEGSISASPLNSRKSD 205
++LLAE ++ + Q E+RRR +EEQ + ++EL ++ + E + R+
Sbjct: 384 KRQLLAERQKRIEEQKEQRRR-LEEQQRREKELRKQQEREQRRHYEEQMRRE--EERRRA 440
Query: 206 PVTPKSEKKSKNKQRNTGDIQKYLTPKSQFGSASHSEAVQEVRKDSVSKDIDSSDRKSPT 265
+ ++K +QR +Q+ L + + S QE R + SP+
Sbjct: 441 EHEQEYKRKQLEEQRQAERLQRQLKQERDY-LVSLQHQRQEQRPVEKKPLYHYKEGMSPS 499
Query: 266 GQDTEIEDMPTLSPQISLGVGEQGADSSIESP 297
+ +++P L S G + S E P
Sbjct: 500 EKPAWAKEIPHLVAVKSQGPALTASQSVHEQP 531
>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
sapiens]
Length = 1276
Score = 53.9 bits (128), Expect = 4e-07
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 92 ASGQESEEVADDYQPVRLLSKPGE--LRREYEE----EISKVAAERRASEEEENKASEEY 145
+ +E EE D +P +L+ PGE LRR++ + A RR E++ + +EE+
Sbjct: 324 SGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEH 383
Query: 146 IQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLSIDINNFCEGSISASPLNSRKSD 205
++LLAE ++ + Q E+RRR +EEQ + ++EL ++ + E + R+
Sbjct: 384 KRQLLAERQKRIEEQKEQRRR-LEEQQRREKELRKQQEREQRRHYEEQMRRE--EERRRA 440
Query: 206 PVTPKSEKKSKNKQRNTGDIQKYLTPKSQFGSASHSEAVQEVRKDSVSKDIDSSDRKSPT 265
+ ++K +QR +Q+ L + + S QE R + SP+
Sbjct: 441 EHEQEYKRKQLEEQRQAERLQRQLKQERDY-LVSLQHQRQEQRPVEKKPLYHYKEGMSPS 499
Query: 266 GQDTEIEDMPTLSPQISLGVGEQGADSSIESP 297
+ +++P L S G + S E P
Sbjct: 500 EKPAWAKEIPHLVAVKSQGPALTASQSVHEQP 531
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 53.9 bits (128), Expect = 4e-07
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 12 SECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSL 71
S+ +C +CM + EPVT PC HT C C + ++ + CP C+ +S R
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCL---ASRKYS 518
Query: 72 VNVELWTIIQKHYPRECKLRASGQESE 98
NV + +I K P E K R E E
Sbjct: 519 KNVIMEELIAKFLPEELKERRKLYEEE 545
Score = 33.9 bits (76), Expect = 0.41
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 15 QCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 60
+C C L +PV+L C HT CK C + A C C ++S+
Sbjct: 157 KCRKCHGFLSDPVSLSCGHTFCKLCLERG-RAADRRCALCGVKLSA 201
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 53.9 bits (128), Expect = 4e-07
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 12 SECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSL 71
S+ +C +CM + EPVT PC HT C C + ++ + CP C+ +S R
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDH-NAKCPLCKDGLSQCL---ASRKYS 477
Query: 72 VNVELWTIIQKHYPRECKLRASGQESE 98
NV + +I K P E K R E E
Sbjct: 478 KNVIMEELIAKFLPEELKERRKLYEEE 504
Score = 33.9 bits (76), Expect = 0.41
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 15 QCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 60
+C C L +PV+L C HT CK C + A C C ++S+
Sbjct: 157 KCRKCHGFLSDPVSLSCGHTFCKLCLERG-RAADRRCALCGVKLSA 201
>gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo
sapiens]
Length = 493
Score = 53.5 bits (127), Expect = 5e-07
Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 75/273 (27%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCF-----QSTVEKASLCCPFCRRRVSSWTRYHTR 67
E C IC+E+L +P++L C H+ C+ C +S ++K CP CR +
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRIS-------YQP 64
Query: 68 RNSLVNVELWTIIQKHYPRECKLRASGQE------------------------------- 96
N N + +++K RE KL GQ+
Sbjct: 65 ENIRPNRHVANLVEK--LREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122
Query: 97 --------SEEVADDYQPVRLLSKPGELRREYE--EEISKVAAERRAS-------EEEEN 139
+EEVA +YQ V+L + LR++ + EE+ E +AS ++
Sbjct: 123 HRGHHTFPTEEVAQEYQ-VKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNV 181
Query: 140 KASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDE-------ELARKLSIDINNFCEG 192
A E ++ +L EE E + EK + + L + E + R+L D+ + +G
Sbjct: 182 LADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQG 241
Query: 193 SI-----SASPLNSRKSDPVTPKSEKKSKNKQR 220
S+ + R + K E KN++R
Sbjct: 242 SVMELLQGVDGVIKRTENVTLKKPETFPKNQRR 274
>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
sapiens]
Length = 1323
Score = 52.4 bits (124), Expect = 1e-06
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 11/216 (5%)
Query: 92 ASGQESEEVADDYQPVRLLSKPGE--LRREYEE----EISKVAAERRASEEEENKASEEY 145
+ +E EE D +P +L+ PGE LRR++ + A RR E++ + +EE+
Sbjct: 324 SGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEH 383
Query: 146 IQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLSIDINNFCEGSISASPLNSRKSD 205
++LLAE ++ + Q E+RRR +EEQ + ++EL ++ + E + R+
Sbjct: 384 KRQLLAERQKRIEEQKEQRRR-LEEQQRREKELRKQQEREQRRHYEEQMRRE--EERRRA 440
Query: 206 PVTPKSEKKSKNKQRNTGDIQKYLTPKSQF-GSASHSEAVQE-VRKDSVSKDIDSSDRKS 263
+ ++K +QR +Q+ L + + S H Q V K + +
Sbjct: 441 EHEQEYKRKQLEEQRQAERLQRQLKQERDYLVSLQHQRQEQRPVEKKPLYHYKEGMSPSE 500
Query: 264 PTGQDTEIEDMPTLSPQISLGVGEQGADSSIESPMP 299
E+E+ L+ Q S + + A+ + +P
Sbjct: 501 KPAWAKEVEERSRLNRQSSPAMPHKVANRISDPNLP 536
>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
sapiens]
Length = 1331
Score = 52.4 bits (124), Expect = 1e-06
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 11/216 (5%)
Query: 92 ASGQESEEVADDYQPVRLLSKPGE--LRREYEE----EISKVAAERRASEEEENKASEEY 145
+ +E EE D +P +L+ PGE LRR++ + A RR E++ + +EE+
Sbjct: 324 SGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEH 383
Query: 146 IQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLSIDINNFCEGSISASPLNSRKSD 205
++LLAE ++ + Q E+RRR +EEQ + ++EL ++ + E + R+
Sbjct: 384 KRQLLAERQKRIEEQKEQRRR-LEEQQRREKELRKQQEREQRRHYEEQMRRE--EERRRA 440
Query: 206 PVTPKSEKKSKNKQRNTGDIQKYLTPKSQF-GSASHSEAVQE-VRKDSVSKDIDSSDRKS 263
+ ++K +QR +Q+ L + + S H Q V K + +
Sbjct: 441 EHEQEYKRKQLEEQRQAERLQRQLKQERDYLVSLQHQRQEQRPVEKKPLYHYKEGMSPSE 500
Query: 264 PTGQDTEIEDMPTLSPQISLGVGEQGADSSIESPMP 299
E+E+ L+ Q S + + A+ + +P
Sbjct: 501 KPAWAKEVEERSRLNRQSSPAMPHKVANRISDPNLP 536
>gi|148528975 LON peptidase N-terminal domain and ring finger 2
[Homo sapiens]
Length = 754
Score = 52.4 bits (124), Expect = 1e-06
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 11 LSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNS 70
+++ +C +CM +L EPVT PC HT C C + ++ A CP C+ ++S RN
Sbjct: 444 VTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAP-HCPLCKDKLSELL---ASRNF 499
Query: 71 LVNVELWTIIQKHYPREC--KLRASGQESEEVAD 102
+ V +I ++ P E + R +E E+++
Sbjct: 500 NITVLAEELIFRYLPDELSDRKRIYDEEMSELSN 533
Score = 44.7 bits (104), Expect = 2e-04
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 16 CGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNVE 75
C C +L +PVTLPC T+CK C + + P RR VNV
Sbjct: 143 CPRCRRLLHKPVTLPCGLTVCKRCVEPGPAR-----PQVRR---------------VNVV 182
Query: 76 LWTIIQKHYPRECKLRASGQESEEVADDYQP 106
L +++K +P EC+LR ++ + QP
Sbjct: 183 LSGLLEKCFPAECRLRRLAGQARSLQRQQQP 213
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 52.0 bits (123), Expect = 1e-06
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 37/193 (19%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVE--KASLCCPFCRRRVSSWTRYHTRR-- 68
E C +C+E L EPV + C H CK C E + CP CR+ +RY + R
Sbjct: 26 EASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT----SRYRSLRPN 81
Query: 69 ---NSLVNVELWTIIQKHYPRECKLRASGQESEEV--ADDYQPVRLLSKPGELRR----- 118
S+V + K R+ L E+ + +D + V L+ R
Sbjct: 82 RQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVV 141
Query: 119 -------EYEEEISKV--AAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAME 169
EY+E++ K E++ E K+SEE ++ E KR E RR +
Sbjct: 142 PLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEE-------KKPGELKRLVESRR---Q 191
Query: 170 EQLKSDEELARKL 182
+ L+ EEL R+L
Sbjct: 192 QILREFEELHRRL 204
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 52.0 bits (123), Expect = 1e-06
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 37/193 (19%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVE--KASLCCPFCRRRVSSWTRYHTRR-- 68
E C +C+E L EPV + C H CK C E + CP CR+ +RY + R
Sbjct: 26 EASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT----SRYRSLRPN 81
Query: 69 ---NSLVNVELWTIIQKHYPRECKLRASGQESEEV--ADDYQPVRLLSKPGELRR----- 118
S+V + K R+ L E+ + +D + V L+ R
Sbjct: 82 RQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVV 141
Query: 119 -------EYEEEISKV--AAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAME 169
EY+E++ K E++ E K+SEE ++ E KR E RR +
Sbjct: 142 PLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEE-------KKPGELKRLVESRR---Q 191
Query: 170 EQLKSDEELARKL 182
+ L+ EEL R+L
Sbjct: 192 QILREFEELHRRL 204
>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
sapiens]
Length = 1297
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 92 ASGQESEEVADDYQPVRLLSKPGE--LRREYEE----EISKVAAERRASEEEENKASEEY 145
+ +E EE D +P +L+ PGE LRR++ + A RR E++ + +EE+
Sbjct: 324 SGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEH 383
Query: 146 IQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARK 181
++LLAE ++ + Q E+RRR +EEQ + ++EL ++
Sbjct: 384 KRQLLAERQKRIEEQKEQRRR-LEEQQRREKELRKQ 418
Score = 34.3 bits (77), Expect = 0.32
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 18/75 (24%)
Query: 115 ELRREYEEEISKVAAERRASEE--------EENKASEEYIQRLLAEEEE----------E 156
E RR YEE++ + RRA E EE + E +Q+ L E+ E
Sbjct: 422 EQRRHYEEQMRREEERRRAEHEQEYIRRQLEEEQRQLEILQQQLLHEQALLLEYKRKQLE 481
Query: 157 EKRQAEKRRRAMEEQ 171
E+RQAE+ +R ++++
Sbjct: 482 EQRQAERLQRQLKQE 496
Score = 29.6 bits (65), Expect = 7.8
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 81 QKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISKVAAERRASEE---- 136
Q+ E K + + + + + + R L + + RRE E + +RR EE
Sbjct: 376 QQRENEEHKRQLLAERQKRIEEQKEQRRRLEE--QQRREKELRKQQEREQRRHYEEQMRR 433
Query: 137 EENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEEL 178
EE + E+ Q + + EEE+RQ E +++QL ++ L
Sbjct: 434 EEERRRAEHEQEYIRRQLEEEQRQLE----ILQQQLLHEQAL 471
>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
sapiens]
Length = 1305
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 92 ASGQESEEVADDYQPVRLLSKPGE--LRREYEE----EISKVAAERRASEEEENKASEEY 145
+ +E EE D +P +L+ PGE LRR++ + A RR E++ + +EE+
Sbjct: 324 SGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEH 383
Query: 146 IQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARK 181
++LLAE ++ + Q E+RRR +EEQ + ++EL ++
Sbjct: 384 KRQLLAERQKRIEEQKEQRRR-LEEQQRREKELRKQ 418
Score = 34.3 bits (77), Expect = 0.32
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 18/75 (24%)
Query: 115 ELRREYEEEISKVAAERRASEE--------EENKASEEYIQRLLAEEEE----------E 156
E RR YEE++ + RRA E EE + E +Q+ L E+ E
Sbjct: 422 EQRRHYEEQMRREEERRRAEHEQEYIRRQLEEEQRQLEILQQQLLHEQALLLEYKRKQLE 481
Query: 157 EKRQAEKRRRAMEEQ 171
E+RQAE+ +R ++++
Sbjct: 482 EQRQAERLQRQLKQE 496
Score = 29.6 bits (65), Expect = 7.8
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 81 QKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISKVAAERRASEE---- 136
Q+ E K + + + + + + R L + + RRE E + +RR EE
Sbjct: 376 QQRENEEHKRQLLAERQKRIEEQKEQRRRLEE--QQRREKELRKQQEREQRRHYEEQMRR 433
Query: 137 EENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEEL 178
EE + E+ Q + + EEE+RQ E +++QL ++ L
Sbjct: 434 EEERRRAEHEQEYIRRQLEEEQRQLE----ILQQQLLHEQAL 471
>gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo
sapiens]
Length = 1352
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 92 ASGQESEEVADDYQPVRLLSKPGE--LRREYEE----EISKVAAERRASEEEENKASEEY 145
+ +E EE D +P +L+ PGE LRR++ + A RR E++ + +EE+
Sbjct: 324 SGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEH 383
Query: 146 IQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARK 181
++LLAE ++ + Q E+RRR +EEQ + ++EL ++
Sbjct: 384 KRQLLAERQKRIEEQKEQRRR-LEEQQRREKELRKQ 418
Score = 34.3 bits (77), Expect = 0.32
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 18/75 (24%)
Query: 115 ELRREYEEEISKVAAERRASEE--------EENKASEEYIQRLLAEEEE----------E 156
E RR YEE++ + RRA E EE + E +Q+ L E+ E
Sbjct: 422 EQRRHYEEQMRREEERRRAEHEQEYIRRQLEEEQRQLEILQQQLLHEQALLLEYKRKQLE 481
Query: 157 EKRQAEKRRRAMEEQ 171
E+RQAE+ +R ++++
Sbjct: 482 EQRQAERLQRQLKQE 496
Score = 29.6 bits (65), Expect = 7.8
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 81 QKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISKVAAERRASEE---- 136
Q+ E K + + + + + + R L + + RRE E + +RR EE
Sbjct: 376 QQRENEEHKRQLLAERQKRIEEQKEQRRRLEE--QQRREKELRKQQEREQRRHYEEQMRR 433
Query: 137 EENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEEL 178
EE + E+ Q + + EEE+RQ E +++QL ++ L
Sbjct: 434 EEERRRAEHEQEYIRRQLEEEQRQLE----ILQQQLLHEQAL 471
>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
sapiens]
Length = 1360
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 92 ASGQESEEVADDYQPVRLLSKPGE--LRREYEE----EISKVAAERRASEEEENKASEEY 145
+ +E EE D +P +L+ PGE LRR++ + A RR E++ + +EE+
Sbjct: 324 SGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEH 383
Query: 146 IQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARK 181
++LLAE ++ + Q E+RRR +EEQ + ++EL ++
Sbjct: 384 KRQLLAERQKRIEEQKEQRRR-LEEQQRREKELRKQ 418
Score = 34.3 bits (77), Expect = 0.32
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 18/75 (24%)
Query: 115 ELRREYEEEISKVAAERRASEE--------EENKASEEYIQRLLAEEEE----------E 156
E RR YEE++ + RRA E EE + E +Q+ L E+ E
Sbjct: 422 EQRRHYEEQMRREEERRRAEHEQEYIRRQLEEEQRQLEILQQQLLHEQALLLEYKRKQLE 481
Query: 157 EKRQAEKRRRAMEEQ 171
E+RQAE+ +R ++++
Sbjct: 482 EQRQAERLQRQLKQE 496
Score = 29.6 bits (65), Expect = 7.8
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 81 QKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISKVAAERRASEE---- 136
Q+ E K + + + + + + R L + + RRE E + +RR EE
Sbjct: 376 QQRENEEHKRQLLAERQKRIEEQKEQRRRLEE--QQRREKELRKQQEREQRRHYEEQMRR 433
Query: 137 EENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEEL 178
EE + E+ Q + + EEE+RQ E +++QL ++ L
Sbjct: 434 EEERRRAEHEQEYIRRQLEEEQRQLE----ILQQQLLHEQAL 471
>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
Length = 270
Score = 50.8 bits (120), Expect = 3e-06
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKA------SLCCPFCRRRVSSWTRYHT 66
E C IC+E+L EP++L C H+LC+ C + ++A CP C S++ H
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG---ISYSFEHL 68
Query: 67 RRNSLVNVELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISK 126
+ N L I+++ +E KL + ++ D + GE + +E K
Sbjct: 69 QANQ----HLANIVER--LKEVKLSPDNGKKRDLCDHH---------GEKLLLFCKEDRK 113
Query: 127 VAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLSIDI 186
V +E++ + EE ++ +++ +A+ ++LK +EE A KL DI
Sbjct: 114 VIC-WLCERSQEHRGHHTVL-------TEEVFKECQEKLQAVLKRLKKEEEEAEKLEADI 165
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 50.8 bits (120), Expect = 3e-06
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKA------SLCCPFCRRRVSSWTRYHT 66
E C IC+E+L EP++L C H+LC+ C + ++A CP C S++ H
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG---ISYSFEHL 68
Query: 67 RRNSLVNVELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISK 126
+ N L I+++ +E KL + ++ D + GE + +E K
Sbjct: 69 QANQ----HLANIVER--LKEVKLSPDNGKKRDLCDHH---------GEKLLLFCKEDRK 113
Query: 127 VAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLSIDI 186
V +E++ + EE ++ +++ +A+ ++LK +EE A KL DI
Sbjct: 114 VIC-WLCERSQEHRGHHTVL-------TEEVFKECQEKLQAVLKRLKKEEEEAEKLEADI 165
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 50.8 bits (120), Expect = 3e-06
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKA------SLCCPFCRRRVSSWTRYHT 66
E C IC+E+L EP++L C H+LC+ C + ++A CP C S++ H
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG---ISYSFEHL 68
Query: 67 RRNSLVNVELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISK 126
+ N L I+++ +E KL + ++ D + GE + +E K
Sbjct: 69 QANQ----HLANIVER--LKEVKLSPDNGKKRDLCDHH---------GEKLLLFCKEDRK 113
Query: 127 VAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLSIDI 186
V +E++ + EE ++ +++ +A+ ++LK +EE A KL DI
Sbjct: 114 VIC-WLCERSQEHRGHHTVL-------TEEVFKECQEKLQAVLKRLKKEEEEAEKLEADI 165
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 50.8 bits (120), Expect = 3e-06
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKA------SLCCPFCRRRVSSWTRYHT 66
E C IC+E+L EP++L C H+LC+ C + ++A CP C S++ H
Sbjct: 366 EVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG---ISYSFEHL 422
Query: 67 RRNSLVNVELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISK 126
+ N L I+++ +E KL + ++ D + GE + +E K
Sbjct: 423 QANQ----HLANIVER--LKEVKLSPDNGKKRDLCDHH---------GEKLLLFCKEDRK 467
Query: 127 VAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLSIDI 186
V +E++ + EE ++ +++ +A+ ++LK +EE A KL DI
Sbjct: 468 VIC-WLCERSQEHRGHHTVL-------TEEVFKECQEKLQAVLKRLKKEEEEAEKLEADI 519
Score = 44.7 bits (104), Expect = 2e-04
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 32/177 (18%)
Query: 13 ECQCGICMEILVEPVTLPCNHTLCKPCF-----QSTV-EKASLCCPFCRRRVSSWTRYHT 66
E C IC+E+L EP+++ C H+ C+ C +S + ++ CP C+ T Y
Sbjct: 40 EVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ------TSYQP 93
Query: 67 RRNSLVNVELWTIIQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISK 126
N N L I+++ RE L Q + D+ GE + + +E K
Sbjct: 94 -GNLRPNRHLANIVRR--LREVVLGPGKQLKAVLCADH---------GEKLQLFCQEDGK 141
Query: 127 VAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARKLS 183
V +E++ ++ +A+E +E+ +++ K+ LK++E+ A KL+
Sbjct: 142 VIC-WLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKK-------LKNEEQEAEKLT 190
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 49.7 bits (117), Expect = 7e-06
Identities = 33/104 (31%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Query: 87 ECKLRASGQESEEVAD-DYQPVRLLSKPGE--LRREY------EEEISKVAAERRASEEE 137
E + S +E EEV + + +P +++ PGE LRR++ +E S+ ++ +E+
Sbjct: 320 EYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQ 379
Query: 138 ENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARK 181
+ + EEY ++LLAE ++ ++Q E+RRR +EEQ + + E R+
Sbjct: 380 QLREQEEYKRQLLAERQKRIEQQKEQRRR-LEEQQRREREARRQ 422
Score = 39.3 bits (90), Expect = 0.010
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 69 NSLVNVELWTIIQKHYPR---ECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEIS 125
+S+VNV + +++ + R E K R+ +++ + Q +L E ++ I
Sbjct: 341 SSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIE 400
Query: 126 KVAAERRASEEEENKASE-----EYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELAR 180
+ +RR EE++ + E E QR +EE+ + E+RR+ EE+ +++EE R
Sbjct: 401 QQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRR 460
Score = 37.7 bits (86), Expect = 0.029
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 115 ELRREYE-EEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLK 173
E RR+ E E+ + E+R EE E + EE +R EE+ +R+ E RR +EE+ +
Sbjct: 418 EARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQR 477
Query: 174 SDEELARKLSIDINNFCEGSISASPLNSRKSDPVTPKSEKKS 215
E L ++L + P +S++ P + K S
Sbjct: 478 HLEVLQQQLLQEQAMLLHDHRRPHPQHSQQPPPPQQERSKPS 519
Score = 35.0 bits (79), Expect = 0.19
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 383 KEISKRKNQESSFEAVKDPCFSAKRRKVSPESSPDQEETEINFTQKLIDLEHLLFERHKQ 442
K I ++K Q E + A+R++ + +QEE LE L ER ++
Sbjct: 397 KRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKR--------RLEEL--ERRRK 446
Query: 443 EEQDRLLALQLQKEVDKEQMVPNRQKGSPDEYHLRATSSPPDKVLNGQRKNPKDGNFKRQ 502
EE++R A + ++ V++EQ RQ ++ HL ++L Q D
Sbjct: 447 EEEERRRAEEEKRRVEREQEYIRRQL-EEEQRHLEVLQ---QQLLQEQAMLLHDHRRPHP 502
Query: 503 THTKHPTPERGSRDK 517
H++ P P + R K
Sbjct: 503 QHSQQPPPPQQERSK 517
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 49.7 bits (117), Expect = 7e-06
Identities = 33/104 (31%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Query: 87 ECKLRASGQESEEVAD-DYQPVRLLSKPGE--LRREY------EEEISKVAAERRASEEE 137
E + S +E EEV + + +P +++ PGE LRR++ +E S+ ++ +E+
Sbjct: 320 EYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQ 379
Query: 138 ENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARK 181
+ + EEY ++LLAE ++ ++Q E+RRR +EEQ + + E R+
Sbjct: 380 QLREQEEYKRQLLAERQKRIEQQKEQRRR-LEEQQRREREARRQ 422
Score = 40.4 bits (93), Expect = 0.004
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 24/187 (12%)
Query: 115 ELRREYE-EEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLK 173
E RR+ E E+ + E+R EE E + EE +R EE+ +R+ E RR +EE+ +
Sbjct: 418 EARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQR 477
Query: 174 SDEELARKLSIDINNFCEGSISASPLNSRKSDPVTPKSEKKSKNKQRNTGDIQKYLTPKS 233
E L ++L + P +S++ P + K S + PK+
Sbjct: 478 HLEVLQQQLLQEQAMLLHDHRRPHPQHSQQPPPPQQERSKPSFHAPE----------PKA 527
Query: 234 QFGSASHSEAVQEVRKDSVSKDIDSSDRKSPTGQDTEIEDMPTLSPQISLGVGEQGADSS 293
+ A + +EV + S+ S R SP S Q + G++ + SS
Sbjct: 528 HYEPA---DRAREVPVRTTSRSPVLSRRDSPLQG----------SGQQNSQAGQRNSTSS 574
Query: 294 IESPMPW 300
IE + W
Sbjct: 575 IEPRLLW 581
Score = 39.3 bits (90), Expect = 0.010
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 69 NSLVNVELWTIIQKHYPR---ECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEIS 125
+S+VNV + +++ + R E K R+ +++ + Q +L E ++ I
Sbjct: 341 SSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIE 400
Query: 126 KVAAERRASEEEENKASE-----EYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELAR 180
+ +RR EE++ + E E QR +EE+ + E+RR+ EE+ +++EE R
Sbjct: 401 QQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRR 460
Score = 35.0 bits (79), Expect = 0.19
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 383 KEISKRKNQESSFEAVKDPCFSAKRRKVSPESSPDQEETEINFTQKLIDLEHLLFERHKQ 442
K I ++K Q E + A+R++ + +QEE LE L ER ++
Sbjct: 397 KRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKR--------RLEEL--ERRRK 446
Query: 443 EEQDRLLALQLQKEVDKEQMVPNRQKGSPDEYHLRATSSPPDKVLNGQRKNPKDGNFKRQ 502
EE++R A + ++ V++EQ RQ ++ HL ++L Q D
Sbjct: 447 EEEERRRAEEEKRRVEREQEYIRRQL-EEEQRHLEVLQ---QQLLQEQAMLLHDHRRPHP 502
Query: 503 THTKHPTPERGSRDK 517
H++ P P + R K
Sbjct: 503 QHSQQPPPPQQERSK 517
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 49.7 bits (117), Expect = 7e-06
Identities = 33/104 (31%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Query: 87 ECKLRASGQESEEVAD-DYQPVRLLSKPGE--LRREY------EEEISKVAAERRASEEE 137
E + S +E EEV + + +P +++ PGE LRR++ +E S+ ++ +E+
Sbjct: 320 EYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQ 379
Query: 138 ENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELARK 181
+ + EEY ++LLAE ++ ++Q E+RRR +EEQ + + E R+
Sbjct: 380 QLREQEEYKRQLLAERQKRIEQQKEQRRR-LEEQQRREREARRQ 422
Score = 39.3 bits (90), Expect = 0.010
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 69 NSLVNVELWTIIQKHYPR---ECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEIS 125
+S+VNV + +++ + R E K R+ +++ + Q +L E ++ I
Sbjct: 341 SSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIE 400
Query: 126 KVAAERRASEEEENKASE-----EYIQRLLAEEEEEEKRQAEKRRRAMEEQLKSDEELAR 180
+ +RR EE++ + E E QR +EE+ + E+RR+ EE+ +++EE R
Sbjct: 401 QQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRR 460
Score = 37.0 bits (84), Expect = 0.049
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 115 ELRREYE-EEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLK 173
E RR+ E E+ + E+R EE E + EE +R EE+ +R+ E RR +EE+ +
Sbjct: 418 EARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQR 477
Query: 174 SDEELARKL 182
E L ++L
Sbjct: 478 HLEVLQQQL 486
Score = 31.2 bits (69), Expect = 2.7
Identities = 34/190 (17%), Positives = 74/190 (38%), Gaps = 21/190 (11%)
Query: 373 ENEESCLLISKEISKRKNQESSFEAVKDPCFSAKRRKVSPESSPDQEETEIN-FTQKLID 431
E EE L +E+ +R+ +E ++ +R + ++E+ + Q+L+
Sbjct: 431 EQEEKRRL--EELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLLQ 488
Query: 432 LEHLLFERHKQEEQDRLLALQLQKEVDKEQMVPNRQKGSPDEYHLRATSSPPDKVLNGQR 491
+ +L E +E ++ A +LQ+++ +EQ + H + + PP
Sbjct: 489 EQAMLLECRWREMEEHRQAERLQRQLQQEQAYLLSLQHDHRRPHPQHSQQPPP------- 541
Query: 492 KNPKDGNFKRQTHTKHPTPERGSRDKNRQVSLKMQLKQSVNRRKMPNSTRDHCKVSKSAH 551
P+ K H P D+ R+V +R + N + + ++
Sbjct: 542 --PQQERSKPSFHAPEPKAHYEPADRAREVE---------DRFRKTNHSSPEAQSKQTGR 590
Query: 552 SLQPSISQKS 561
L+P + +S
Sbjct: 591 VLEPPVPSRS 600
Score = 30.8 bits (68), Expect = 3.5
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 25/117 (21%)
Query: 80 IQKHYPRECKLRASGQESEEVADDYQPVRLLSKPGELRREYEEEISKVAAERRASEEEEN 139
+++ RE + R QE E+ + + R L EL R +EE E R EEE
Sbjct: 409 LEEQQRREREARRQ-QEREQRRREQEEKRRLE---ELERRRKEE------EERRRAEEEK 458
Query: 140 KASE---EYIQRLLAEEE-----------EEEKRQAEKRRRAMEEQLKSDEELARKL 182
+ E EYI+R L EE+ +E+ E R R MEE + E L R+L
Sbjct: 459 RRVEREQEYIRRQLEEEQRHLEVLQQQLLQEQAMLLECRWREMEEH-RQAERLQRQL 514
Score = 30.0 bits (66), Expect = 6.0
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 383 KEISKRKNQESSFEAVKDPCFSAKRRKVSPESSPDQEETEINFTQKLIDLEHLLFERHKQ 442
K I ++K Q E + A+R++ + +QEE LE L ER ++
Sbjct: 397 KRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKR--------RLEEL--ERRRK 446
Query: 443 EEQDRLLALQLQKEVDKEQMVPNRQ 467
EE++R A + ++ V++EQ RQ
Sbjct: 447 EEEERRRAEEEKRRVEREQEYIRRQ 471
>gi|116174778 centrosome spindle pole associated protein 1 isoform b
[Homo sapiens]
Length = 1221
Score = 49.3 bits (116), Expect = 1e-05
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 95 QESEEVADDYQPVRLLSKPGELRREYEEEISKVAAERRASEEEENKASEEYIQRLLAEEE 154
+E +A++ + RL + +++EYEEE K +R EEE+ +EE+I+ LAEE
Sbjct: 754 RERLRIAEEKEERRLAEQRARIQQEYEEEQEK----KREKEEEQRLKNEEHIR--LAEER 807
Query: 155 EEEKRQAEKRRRAMEEQLKSDEELARKLSIDINNFCE--GSISASPLNSRKSDPVTPKSE 212
++E AE++++ EE K ++ + ++CE I + R+ P+ P +
Sbjct: 808 QKE---AERKKKEEEE----------KYNLQLQHYCERDNLIGEETKHMRQPSPIVPALQ 854
Query: 213 KKSKNKQRNTGDIQKYLTPKSQFGSASHSEA 243
K +K + + + S S +++
Sbjct: 855 NKIASKLQRPPSVDSIIRSFIHESSMSRAQS 885
>gi|116174789 centrosome spindle pole associated protein 1 isoform a
[Homo sapiens]
Length = 1256
Score = 49.3 bits (116), Expect = 1e-05
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 95 QESEEVADDYQPVRLLSKPGELRREYEEEISKVAAERRASEEEENKASEEYIQRLLAEEE 154
+E +A++ + RL + +++EYEEE K +R EEE+ +EE+I+ LAEE
Sbjct: 789 RERLRIAEEKEERRLAEQRARIQQEYEEEQEK----KREKEEEQRLKNEEHIR--LAEER 842
Query: 155 EEEKRQAEKRRRAMEEQLKSDEELARKLSIDINNFCE--GSISASPLNSRKSDPVTPKSE 212
++E AE++++ EE K ++ + ++CE I + R+ P+ P +
Sbjct: 843 QKE---AERKKKEEEE----------KYNLQLQHYCERDNLIGEETKHMRQPSPIVPALQ 889
Query: 213 KKSKNKQRNTGDIQKYLTPKSQFGSASHSEA 243
K +K + + + S S +++
Sbjct: 890 NKIASKLQRPPSVDSIIRSFIHESSMSRAQS 920
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.126 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,822,836
Number of Sequences: 37866
Number of extensions: 1209720
Number of successful extensions: 17207
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 819
Number of HSP's that attempted gapping in prelim test: 7626
Number of HSP's gapped (non-prelim): 5423
length of query: 571
length of database: 18,247,518
effective HSP length: 108
effective length of query: 463
effective length of database: 14,157,990
effective search space: 6555149370
effective search space used: 6555149370
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.