CCRN4L 25349

Name: CCRN4L	Sequence: fasta or formatted (431aa)		NCBI GI: 31083028
Description: CCR4 carbon catabolite repression 4-like		Referenced in: Circadian Rhythms RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 37 3 C cysteine 3.7 16 1 D aspartate 4.6 20 1 E glutamate 6.0 26 2 F phenylalanine 4.2 18 2 G glycine 4.6 20 1 H histidine 2.8 12 1 I isoleucine 3.5 15 1 K lysine 3.5 15 1 L leucine 12.5 54 2 M methionine 0.9 4 1 N asparagine 3.9 17 2 P proline 7.9 34 2 Q glutamine 4.6 20 1 R arginine 7.0 30 2 S serine 8.4 36 3 T threonine 5.3 23 2 V valine 3.9 17 1 W tryptophan 1.4 6 1 Y tyrosine 2.6 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CCR4 carbon catabolite repression 4-like PDE12 0.090 phosphodiesterase 12 CNOT6L 0.080 CCR4-NOT transcription complex, subunit 6-like [Hom... CNOT6 0.075 CCR4-NOT transcription complex, subunit 6 ANGEL1 0.065 angel homolog 1 ANGEL2 0.065 LOC90806 protein TTRAP 0.017 TRAF and TNF receptor-associated protein ADAM19 0.013 ADAM metallopeptidase domain 19 preproprotein FOXQ1 0.013 forkhead box Q1 SDK1 0.012 sidekick 1 BIN2 0.012 bridging integrator 2 LOC100292568 0.012 PREDICTED: hypothetical protein LOC100291146 0.012 PREDICTED: hypothetical protein XP_002346600 LOC100289534 0.012 PREDICTED: hypothetical protein XP_002342442 DDX28 0.010 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 ARHGEF17 0.010 Rho guanine nucleotide exchange factor (GEF) 17 [Hom... ZNF628 0.009 zinc finger protein 628 MAP1A 0.008 microtubule-associated protein 1A INPPL1 0.008 inositol polyphosphate phosphatase-like 1 LOC100292157 0.008 PREDICTED: hypothetical protein LOC100290926 0.008 PREDICTED: hypothetical protein XP_002347568 LOC100288995 0.008 PREDICTED: hypothetical protein XP_002343379 FAM48B1 0.008 hypothetical protein LOC100130302 MAST3 0.008 microtubule associated serine/threonine kinase 3 [H... MLL 0.008 myeloid/lymphoid or mixed-lineage leukemia protein [... CPEB3 0.008 cytoplasmic polyadenylation element binding protein ... FOXC2 0.008 forkhead box C2 LOC100291743 0.008 PREDICTED: hypothetical protein XP_002344931 LOC100289969 0.008 PREDICTED: hypothetical protein XP_002347692 LOC100288859 0.008 PREDICTED: hypothetical protein XP_002343508 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.