Guide to the Human Genome
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Name: ANGEL1 Sequence: fasta or formatted (670aa) NCBI GI: 224282153
Description:

angel homolog 1

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         49           2
 C cysteine            3.6         24           2
 D aspartate           5.1         34           1
 E glutamate           8.5         57           2
 F phenylalanine       3.9         26           2
 G glycine             6.4         43           1
 H histidine           2.2         15           1
 I isoleucine          3.0         20           2
 K lysine              2.1         14           1
 L leucine            13.3         89           3
 M methionine          2.5         17           2
 N asparagine          2.8         19           1
 P proline             7.3         49           2
 Q glutamine           5.5         37           2
 R arginine            5.5         37           2
 S serine              7.0         47           3
 T threonine           3.7         25           2
 V valine              5.1         34           1
 W tryptophan          2.2         15           1
 Y tyrosine            2.8         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   angel homolog 1 
ANGEL2                0.262   LOC90806 protein 
CNOT6L                0.065   CCR4-NOT transcription complex, subunit 6-like [Hom...
CNOT6                 0.060   CCR4-NOT transcription complex, subunit 6 
PDE12                 0.054   phosphodiesterase 12 
CCRN4L                0.041   CCR4 carbon catabolite repression 4-like 
RP1L1                 0.006   retinitis pigmentosa 1-like 1 
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.005   eukaryotic translation initiation factor 4 gamma, 1 ...
RPSA                  0.004   ribosomal protein SA 
RPSA                  0.004   ribosomal protein SA 
HUWE1                 0.004   HECT, UBA and WWE domain containing 1 
ATE1                  0.004   arginyltransferase 1 isoform 2 
LOC649238             0.004   PREDICTED: similar to hCG1645335 
LOC649238             0.004   PREDICTED: similar to hCG1645335 
CLGN                  0.004   calmegin 
CLGN                  0.004   calmegin 
C2orf16               0.004   hypothetical protein LOC84226 
F11                   0.004   coagulation factor XI precursor 
EIF4G3                0.004   eukaryotic translation initiation factor 4 gamma, 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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