Search of human proteins with 30520312

Search of human proteins with 30520312

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30520312 melanocortin 2 receptor accessory protein isoform
alpha [Homo sapiens]
         (172 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30520312 melanocortin 2 receptor accessory protein isoform al...   362   e-100
gi|45827704 melanocortin 2 receptor accessory protein isoform be...   140   5e-34
gi|156523251 melanocortin 2 receptor accessory protein 2 [Homo s...    59   3e-09
gi|239755719 PREDICTED: similar to hCG2003440 [Homo sapiens]           35   0.032
gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo s...    30   1.3  
gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo sa...    30   1.3  
gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo sa...    30   1.3  
gi|118600963 Nik related kinase [Homo sapiens]                         30   1.3  
gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo ...    29   2.3  
gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo ...    29   2.3  
gi|121583542 mitogen-activated protein kinase kinase kinase 15 [...    29   2.3  
gi|118582284 msh homeobox 1 [Homo sapiens]                             28   3.0  
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    28   3.0  
gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2...    28   3.0  
gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1...    28   3.0  
gi|194272180 plexin B1 [Homo sapiens]                                  28   3.9  
gi|40254442 plexin B1 [Homo sapiens]                                   28   3.9  
gi|31881779 GDP-mannose pyrophosphorylase A [Homo sapiens]             28   3.9  
gi|45447090 GDP-mannose pyrophosphorylase A [Homo sapiens]             28   3.9  
gi|7706501 WW domain binding protein 11 [Homo sapiens]                 28   3.9  
gi|53933272 olfactory receptor, family 6, subfamily C, member 70...    28   3.9  
gi|239755070 PREDICTED: similar to proprotein convertase subtili...    28   5.1  
gi|120952764 mastermind-like domain containing 1 [Homo sapiens]        27   6.7  
gi|148747864 JAW1-related protein isoform a [Homo sapiens]             27   6.7  
gi|154091334 JAW1-related protein isoform c [Homo sapiens]             27   6.7  
gi|154091332 JAW1-related protein isoform b [Homo sapiens]             27   6.7  
gi|148728182 JAW1-related protein isoform b [Homo sapiens]             27   6.7  
gi|148664224 adhesion molecule, interacts with CXADR antigen 1 i...    27   6.7  
gi|148664207 adhesion molecule, interacts with CXADR antigen 1 i...    27   6.7  
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    27   6.7  

>gi|30520312 melanocortin 2 receptor accessory protein isoform alpha
           [Homo sapiens]
          Length = 172

 Score =  362 bits (928), Expect = e-100
 Identities = 172/172 (100%), Positives = 172/172 (100%)

Query: 1   MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM 60
           MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM
Sbjct: 1   MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM 60

Query: 61  SWSASPQMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSRTGPD 120
           SWSASPQMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSRTGPD
Sbjct: 61  SWSASPQMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSRTGPD 120

Query: 121 QPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKPSEPPPGDRTSQLQS 172
           QPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKPSEPPPGDRTSQLQS
Sbjct: 121 QPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKPSEPPPGDRTSQLQS 172


>gi|45827704 melanocortin 2 receptor accessory protein isoform
          beta [Homo sapiens]
          Length = 102

 Score =  140 bits (353), Expect = 5e-34
 Identities = 68/68 (100%), Positives = 68/68 (100%)

Query: 1  MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM 60
          MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM
Sbjct: 1  MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYM 60

Query: 61 SWSASPQM 68
          SWSASPQM
Sbjct: 61 SWSASPQM 68


>gi|156523251 melanocortin 2 receptor accessory protein 2 [Homo
          sapiens]
          Length = 205

 Score = 58.5 bits (140), Expect = 3e-09
 Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 2/66 (3%)

Query: 6  NASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYMSWSAS 65
          +AS   Y++EY  +Y ++ PV  + LKAHK+SIVI FWV LA FV+ +F +L  ++ + +
Sbjct: 15 SASNSDYTWEY--EYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFMFFVLTLLTKTGA 72

Query: 66 PQMRNS 71
          P   N+
Sbjct: 73 PHQDNA 78


>gi|239755719 PREDICTED: similar to hCG2003440 [Homo sapiens]
          Length = 436

 Score = 35.0 bits (79), Expect = 0.032
 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 24/113 (21%)

Query: 53  LFLILLYMSWSASPQMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREP----LATSQAQA 108
           +F  LL+ SW +S     SP+H + C     ++L +      PC R+      A S A  
Sbjct: 218 VFQDLLFCSWHSS-----SPRHWR-CVGPENISLDIRYDPSFPCGRDRPGSRTAGSAAAL 271

Query: 109 SSVEPGSRTGPDQPLRQESS------------STLPLGGFQTHPTLLWELTLN 149
           +++ PG    P Q  R+E S            S+LP     T   +LWE  L+
Sbjct: 272 AALVPGLTASPVQAARREGSSCVRIRPRPPLLSSLPYAEISTQ--VLWETVLS 322


>gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo
            sapiens]
          Length = 1662

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 93   CLPCHREPLATSQAQASSVEPGSRTGPDQPLRQESSSTLPLGGFQTHPTLLWELTLNGGP 152
            C P    P + S+ Q+ S +P  ++    PLR +++S        T P+   E TLNG  
Sbjct: 1032 CQPHGHSPSSQSRGQSPSCQPRGQS----PLRSQAASR----QVSTMPSRKLETTLNGAH 1083

Query: 153  LVRSKPSEP 161
                 P++P
Sbjct: 1084 STSEGPAKP 1092


>gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo
            sapiens]
          Length = 1810

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 93   CLPCHREPLATSQAQASSVEPGSRTGPDQPLRQESSSTLPLGGFQTHPTLLWELTLNGGP 152
            C P    P + S+ Q+ S +P  ++    PLR +++S        T P+   E TLNG  
Sbjct: 1180 CQPHGHSPSSQSRGQSPSCQPRGQS----PLRSQAASR----QVSTMPSRKLETTLNGAH 1231

Query: 153  LVRSKPSEP 161
                 P++P
Sbjct: 1232 STSEGPAKP 1240


>gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo
            sapiens]
          Length = 1810

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 93   CLPCHREPLATSQAQASSVEPGSRTGPDQPLRQESSSTLPLGGFQTHPTLLWELTLNGGP 152
            C P    P + S+ Q+ S +P  ++    PLR +++S        T P+   E TLNG  
Sbjct: 1180 CQPHGHSPSSQSRGQSPSCQPRGQS----PLRSQAASR----QVSTMPSRKLETTLNGAH 1231

Query: 153  LVRSKPSEP 161
                 P++P
Sbjct: 1232 STSEGPAKP 1240


>gi|118600963 Nik related kinase [Homo sapiens]
          Length = 1582

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 16/78 (20%)

Query: 71  SPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSRTGPDQPLRQ----- 125
           S  HH   P      LHL  Q  +P   +   + QAQA ++EP    G  Q L +     
Sbjct: 593 SQDHHVLLP------LHLDTQVLIPVEGQTEGSPQAQAWTLEPPQAIGSVQALIEGLSRD 646

Query: 126 -----ESSSTLPLGGFQT 138
                 S+++ PLG  QT
Sbjct: 647 LLRAPNSNNSKPLGPLQT 664


>gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo
           sapiens]
          Length = 194

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)

Query: 113 PGSRTGPDQPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKP---SEPPPGDRT 167
           P    GP  P  Q  +   P     THP L W  T  G  L    P    E   G RT
Sbjct: 46  PSDTQGPRLPASQTRTPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRT 103


>gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo
           sapiens]
          Length = 194

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)

Query: 113 PGSRTGPDQPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKP---SEPPPGDRT 167
           P    GP  P  Q  +   P     THP L W  T  G  L    P    E   G RT
Sbjct: 46  PSDTQGPRLPASQTRTPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRT 103


>gi|121583542 mitogen-activated protein kinase kinase kinase 15
           [Homo sapiens]
          Length = 788

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 94  LPCHREPLATSQAQASSVEPGSRTGPD 120
           LP   EP+ATS ++  SV P S   PD
Sbjct: 409 LPTQGEPMATSSSEHGSVSPDSDAQPD 435


>gi|118582284 msh homeobox 1 [Homo sapiens]
          Length = 303

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 11/71 (15%)

Query: 102 ATSQAQASSVEPGSRTGPDQPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKPSEP 161
           A   AQ   V PGS   PD P     SS  PLG F         L L    LV+++  E 
Sbjct: 89  AGGSAQPLGVPPGSLGAPDAP-----SSPRPLGHFSVGGL----LKLPEDALVKAESPEK 139

Query: 162 PPGDRTSQLQS 172
           P  +RT  +QS
Sbjct: 140 P--ERTPWMQS 148


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
            sapiens]
          Length = 1362

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 10/96 (10%)

Query: 67   QMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSRTGPDQPLRQE 126
            Q  +SP+HH++ P+S G   HL   +  P    PL     Q S  +  +   P Q   Q 
Sbjct: 1041 QHHHSPRHHKSDPYSTG---HL---REAP---SPLMIHSPQMSQFQSLTHQSPPQQNVQP 1091

Query: 127  SSSTLPLGG-FQTHPTLLWELTLNGGPLVRSKPSEP 161
                L      Q  P ++ +      P++RS+P  P
Sbjct: 1092 KKQELRAASVVQPQPLVVVKEEKIHSPIIRSEPFSP 1127


>gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2
           [Homo sapiens]
          Length = 659

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 12/73 (16%)

Query: 60  MSWSASPQMRNSPKHHQTCPWSHGLN-LHLCIQKCLPC---HREPLATSQAQASSVEPGS 115
           MS  ASP   +SP H+Q  P SHG + L    ++  P     R+PL   +  +SS  PG+
Sbjct: 189 MSPLASPP--SSPPHYQRVPLSHGYSKLRSSAEQMHPAPYEARQPLVQPEG-SSSGGPGT 245

Query: 116 RTGPDQPLRQESS 128
           +     PLR ++S
Sbjct: 246 K-----PLRHQAS 253


>gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1
           [Homo sapiens]
          Length = 660

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 12/73 (16%)

Query: 60  MSWSASPQMRNSPKHHQTCPWSHGLN-LHLCIQKCLPC---HREPLATSQAQASSVEPGS 115
           MS  ASP   +SP H+Q  P SHG + L    ++  P     R+PL   +  +SS  PG+
Sbjct: 190 MSPLASPP--SSPPHYQRVPLSHGYSKLRSSAEQMHPAPYEARQPLVQPEG-SSSGGPGT 246

Query: 116 RTGPDQPLRQESS 128
           +     PLR ++S
Sbjct: 247 K-----PLRHQAS 254


>gi|194272180 plexin B1 [Homo sapiens]
          Length = 2135

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 124 RQESSSTLPLGG----FQTHPTLLWELTLNGGPLVRSKPSEPP 162
           R  +S TL LG     FQ  P L  E T++ GP++ S+   PP
Sbjct: 40  RDPTSGTLYLGATNFLFQLSPGLQLEATVSTGPVLDSRDCLPP 82


>gi|40254442 plexin B1 [Homo sapiens]
          Length = 2135

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 124 RQESSSTLPLGG----FQTHPTLLWELTLNGGPLVRSKPSEPP 162
           R  +S TL LG     FQ  P L  E T++ GP++ S+   PP
Sbjct: 40  RDPTSGTLYLGATNFLFQLSPGLQLEATVSTGPVLDSRDCLPP 82


>gi|31881779 GDP-mannose pyrophosphorylase A [Homo sapiens]
          Length = 420

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 13/135 (9%)

Query: 43  WVSLAAFVVLLFLILLYMSWSASPQMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLA 102
           W  + +    L+   LY+S           KH    PW  G N+++            +A
Sbjct: 245 WSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRG-NVYIH-------PTAKVA 296

Query: 103 TSQAQASSVEPGSRTGPDQPLRQESSSTLPLGGFQTHPTLL-----WELTLNGGPLVRSK 157
            S     +V  G      + +R   S  L     Q H  +L     W  T+     V   
Sbjct: 297 PSAVLGPNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGT 356

Query: 158 PSEPPPGDRTSQLQS 172
           PS+P P D  +++ S
Sbjct: 357 PSDPNPNDPRARMDS 371


>gi|45447090 GDP-mannose pyrophosphorylase A [Homo sapiens]
          Length = 420

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 13/135 (9%)

Query: 43  WVSLAAFVVLLFLILLYMSWSASPQMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLA 102
           W  + +    L+   LY+S           KH    PW  G N+++            +A
Sbjct: 245 WSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRG-NVYIH-------PTAKVA 296

Query: 103 TSQAQASSVEPGSRTGPDQPLRQESSSTLPLGGFQTHPTLL-----WELTLNGGPLVRSK 157
            S     +V  G      + +R   S  L     Q H  +L     W  T+     V   
Sbjct: 297 PSAVLGPNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGT 356

Query: 158 PSEPPPGDRTSQLQS 172
           PS+P P D  +++ S
Sbjct: 357 PSDPNPNDPRARMDS 371


>gi|7706501 WW domain binding protein 11 [Homo sapiens]
          Length = 641

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 8/101 (7%)

Query: 69  RNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSRTGPDQ--PLRQE 126
           + S K H+    S G +     Q+  P   + +  SQ QA  +      GP    PLR  
Sbjct: 368 KQSQKQHKEESHSDGTSTASSQQQAPP---QSVPPSQIQAPPMPGPPPLGPPPAPPLRPP 424

Query: 127 SSST-LPLGGFQTHPTLLWELTLNG--GPLVRSKPSEPPPG 164
              T LP G     P  L    + G  GPL R  P  PPPG
Sbjct: 425 GPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPG 465


>gi|53933272 olfactory receptor, family 6, subfamily C, member 70
           [Homo sapiens]
          Length = 312

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 39  VIAFWVSLAAFVVLLFLILLYMSWSAS-----PQMRNSPKHHQTCPWSHGLNLHLCIQKC 93
           +IAF +++   +V LFL++L  S+        P  +   K   TC  SH + + +    C
Sbjct: 195 LIAFLLAVMTLIVTLFLVILSYSYIIKTILKFPSAQQKKKAFSTCS-SHMIVVSITYGSC 253

Query: 94  LPCHREPLATSQAQAS 109
           +  + +P A  +   S
Sbjct: 254 MFIYIKPSANERVALS 269


>gi|239755070 PREDICTED: similar to proprotein convertase
           subtilisin/kexin type 5 [Homo sapiens]
          Length = 853

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 4/38 (10%)

Query: 75  HQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVE 112
           HQ+CP     + H C+    PCH++ L  S  +A   E
Sbjct: 347 HQSCPRGFYADSHHCV----PCHKDCLECSGPKADDCE 380


>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
          Length = 774

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 101 LATSQAQASSVEPGSRTGPDQPLRQE--SSSTLPLGGFQTHPTLLWELT 147
           + T Q    S  P S  GP  P R E  SS  LP   F    +L+  LT
Sbjct: 436 IKTPQGHLMSALPASNPGPSPPYRPEKLSSPGLPQQSFTPQCSLIRSLT 484


>gi|148747864 JAW1-related protein isoform a [Homo sapiens]
          Length = 903

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 43  WVSLAAFVVLLFLILLYMSWSASPQMRNSPKHHQTCP-------WSHGL 84
           W+  A  +VL  ++ LY S+++  +  + P    TC        WS GL
Sbjct: 847 WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGL 895


>gi|154091334 JAW1-related protein isoform c [Homo sapiens]
          Length = 597

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 43  WVSLAAFVVLLFLILLYMSWSASPQMRNSPKHHQTCP-------WSHGL 84
           W+  A  +VL  ++ LY S+++  +  + P    TC        WS GL
Sbjct: 541 WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGL 589


>gi|154091332 JAW1-related protein isoform b [Homo sapiens]
          Length = 821

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 43  WVSLAAFVVLLFLILLYMSWSASPQMRNSPKHHQTCP-------WSHGL 84
           W+  A  +VL  ++ LY S+++  +  + P    TC        WS GL
Sbjct: 765 WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGL 813


>gi|148728182 JAW1-related protein isoform b [Homo sapiens]
          Length = 821

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 43  WVSLAAFVVLLFLILLYMSWSASPQMRNSPKHHQTCP-------WSHGL 84
           W+  A  +VL  ++ LY S+++  +  + P    TC        WS GL
Sbjct: 765 WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGL 813


>gi|148664224 adhesion molecule, interacts with CXADR antigen 1
           isoform 2 [Homo sapiens]
          Length = 384

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 14/55 (25%), Positives = 25/55 (45%)

Query: 110 SVEPGSRTGPDQPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKPSEPPPG 164
           ++ PG     +  L   S+ ++P+G FQ    L+ ++  N G L+     E   G
Sbjct: 48  TLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQG 102


>gi|148664207 adhesion molecule, interacts with CXADR antigen 1
           isoform 1 [Homo sapiens]
          Length = 394

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 14/55 (25%), Positives = 25/55 (45%)

Query: 110 SVEPGSRTGPDQPLRQESSSTLPLGGFQTHPTLLWELTLNGGPLVRSKPSEPPPG 164
           ++ PG     +  L   S+ ++P+G FQ    L+ ++  N G L+     E   G
Sbjct: 58  TLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQG 112


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 9/95 (9%)

Query: 87  HLCIQKCLPCHREPLATSQAQASSVEPGSRTGPDQPLRQESSSTLPL---------GGFQ 137
           HL +   +     P A   A A+ V  G+  GP  P  Q S +  P           G  
Sbjct: 715 HLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPS 774

Query: 138 THPTLLWELTLNGGPLVRSKPSEPPPGDRTSQLQS 172
           + P+L  +  L   P + S     PP    S+ QS
Sbjct: 775 SSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQS 809


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,136,707
Number of Sequences: 37866
Number of extensions: 370489
Number of successful extensions: 1433
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1417
Number of HSP's gapped (non-prelim): 46
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.