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Search of human proteins with 30425446
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30425446 hypothetical protein LOC255783 [Homo sapiens]
(142 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30425446 hypothetical protein LOC255783 [Homo sapiens] 299 6e-82
gi|153792074 proline rich 12 [Homo sapiens] 42 2e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 41 3e-04
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 40 5e-04
gi|238859557 regulatory factor X1 [Homo sapiens] 40 7e-04
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 40 7e-04
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 40 8e-04
gi|23510368 homeobox D11 [Homo sapiens] 39 0.001
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 39 0.001
gi|7706501 WW domain binding protein 11 [Homo sapiens] 39 0.001
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 39 0.001
gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens] 39 0.001
gi|148613878 acrosin precursor [Homo sapiens] 39 0.001
gi|164698460 mannosidase, endo-alpha-like isoform 3 [Homo sapiens] 39 0.001
gi|72534766 mannosidase, endo-alpha-like isoform 1 [Homo sapiens] 39 0.001
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 39 0.002
gi|194239681 tubulin tyrosine ligase-like family, member 10 isof... 39 0.002
gi|55741677 SET domain containing 1A [Homo sapiens] 38 0.002
gi|171543895 ataxin 2 [Homo sapiens] 38 0.002
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 38 0.003
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 38 0.003
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 38 0.003
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 38 0.003
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 38 0.003
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 37 0.004
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 37 0.004
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.004
gi|32483397 dopamine receptor D4 [Homo sapiens] 37 0.006
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 37 0.006
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
>gi|30425446 hypothetical protein LOC255783 [Homo sapiens]
Length = 142
Score = 299 bits (765), Expect = 6e-82
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MRGTSCVGGGAESPGGAGLSEGPRGRWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVPTRS 60
MRGTSCVGGGAESPGGAGLSEGPRGRWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVPTRS
Sbjct: 1 MRGTSCVGGGAESPGGAGLSEGPRGRWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVPTRS 60
Query: 61 PAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSDP 120
PAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSDP
Sbjct: 61 PAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSDP 120
Query: 121 DRRPSRQTPRETPEAAEGRRPG 142
DRRPSRQTPRETPEAAEGRRPG
Sbjct: 121 DRRPSRQTPRETPEAAEGRRPG 142
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 41.6 bits (96), Expect = 2e-04
Identities = 20/50 (40%), Positives = 24/50 (48%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQ 106
P +P + P P P PP A P PP P PAAA L+ P P P+
Sbjct: 1487 PLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPE 1536
Score = 37.4 bits (85), Expect = 0.004
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 14/83 (16%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRR 116
P PA P+ P AP+P P +PP P PA S P P P PL+
Sbjct: 1476 PPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPS-------PPPPPPPAAAPLAA--- 1525
Query: 117 YSDPDRRPSRQTPRETPEAAEGR 139
P P+ +P E PE + R
Sbjct: 1526 ---PPEEPAAPSP-EDPELPDTR 1544
Score = 32.0 bits (71), Expect = 0.18
Identities = 24/77 (31%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRR 116
P P AP PQP P PP +P +P P A + S P P P +P
Sbjct: 1458 PPTPPPAPT-PQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMP------ 1510
Query: 117 YSDPDRRPSRQTPRETP 133
S P P P P
Sbjct: 1511 -SPPPPPPPAAAPLAAP 1526
Score = 30.0 bits (66), Expect = 0.67
Identities = 43/155 (27%), Positives = 51/155 (32%), Gaps = 20/155 (12%)
Query: 8 GGGAESPGGAGLSEGPRGRWLRLAPV-------CAYFLCVSLAAVLLAVYYGLIWVPTRS 60
GGG P G G ++ P R P + L S +A A + S
Sbjct: 210 GGGVLGPAGLGPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFS 269
Query: 61 PAAPAGPQPSAPSP-----------PCAARPGVPPVPAPAAAS-LSCLLGVPG-GPRPQL 107
AAP P P P P +A+P PP PA A LSC P G R L
Sbjct: 270 GAAPGPPPPERALPRQDTVIKHYQRPASAQPPPPPPPAHALQHYLSCGGSYPSMGHRANL 329
Query: 108 QLPLSRRRRYSDPDRRPSRQTPRETPEAAEGRRPG 142
S PS+ P A GR G
Sbjct: 330 ACSPLGGGEPSPGAGEPSKAGPSGATAGASGRATG 364
Score = 28.5 bits (62), Expect = 2.0
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 17/75 (22%)
Query: 59 RSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYS 118
+ + P GP P P AA PG PP+P +A+ + G P P PL +
Sbjct: 1414 KDTSTPDGP----PLAPAAAVPGPPPLPGLPSANSN------GTPEP----PLLEEK--- 1456
Query: 119 DPDRRPSRQTPRETP 133
P P TP+ P
Sbjct: 1457 PPPTPPPAPTPQPQP 1471
Score = 28.1 bits (61), Expect = 2.6
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Query: 65 AGPQPSAPSPPCAARPGVPPVPAPAA 90
+GP +AP PP P PP PAPA+
Sbjct: 1032 SGPHQAAPPPP----PPPPPPPAPAS 1053
Score = 27.7 bits (60), Expect = 3.3
Identities = 21/85 (24%), Positives = 28/85 (32%), Gaps = 23/85 (27%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRR 116
P P P A +P A PP APA P+P+
Sbjct: 1666 PWHRPPVPVRRSGQAKNPVSAGGSSAPPPKAPAPP-----------PKPE---------- 1704
Query: 117 YSDPDRRPSRQTPRETPEAAEGRRP 141
P++ S + P +TPE A P
Sbjct: 1705 --TPEKTTSEKPPEQTPETAMPEPP 1727
Score = 27.3 bits (59), Expect = 4.4
Identities = 26/93 (27%), Positives = 27/93 (29%), Gaps = 8/93 (8%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVP--------PVPAPAAASLSCLLGVPGGPRPQLQ 108
P +PAA P P P A G P P P P A P P PQ
Sbjct: 1422 PPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPA 1481
Query: 109 LPLSRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
LP P P P P A P
Sbjct: 1482 LPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 1514
Score = 26.6 bits (57), Expect = 7.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 71 APSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQ 108
AP PP P PP+P A L P P P+L+
Sbjct: 832 APQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLR 869
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 41.2 bits (95), Expect = 3e-04
Identities = 40/117 (34%), Positives = 45/117 (38%), Gaps = 30/117 (25%)
Query: 8 GGGAESPGGAGLSEGPRGRWLRLAPVCAYFLCVSLA----AVLLAVYYGLIWVPTRSPAA 63
G G P G G ++ G L A VSL A LL P PAA
Sbjct: 183 GPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALL---------PLPKPAA 233
Query: 64 P-------------AGPQPSAPSPPCAARP----GVPPVPAPAAASLSCLLGVPGGP 103
P A P P+APSPP A P PP P PA A+L+ G P GP
Sbjct: 234 PGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGP 290
Score = 38.5 bits (88), Expect = 0.002
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 63 APAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSDPDR 122
+PAG + P+ P PG P P PA + PGG PQ P S RR
Sbjct: 66 SPAGAAGAGPAAPAEGAPGAAPEPPPAGRAR------PGGGGPQRPGPPSPRRPLVPAGP 119
Query: 123 RPSRQTPRETPEAAEG 138
P R PE + G
Sbjct: 120 APPAAKLRPPPEGSAG 135
Score = 37.7 bits (86), Expect = 0.003
Identities = 32/100 (32%), Positives = 35/100 (35%), Gaps = 18/100 (18%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASL---------SC-----LLGVPGG 102
P A P G P P PP RP VP PAP AA L SC V G
Sbjct: 90 PPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAG 149
Query: 103 PRPQLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEGRRPG 142
P P P + + P +R P P G PG
Sbjct: 150 PEPAPAGP----AKPAGPAALAARAGPGPGPGPGPGPGPG 185
Score = 34.3 bits (77), Expect = 0.036
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 59 RSPAAPAGPQ---PSAPSPPCAAR----PGVPPVPAPAAASLSCLLGVPG 101
R P PAGP P+ P PP AA+ G P PAPAA + + G PG
Sbjct: 282 RPPGHPAGPPTAAPAVP-PPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG 330
Score = 33.9 bits (76), Expect = 0.047
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Query: 60 SPAAPAG-PQPSAPSPPCAARP---------GVPPVPAPAAASLSCLLGVPGGPRP 105
+PAAPA P P P+P ARP P VP PAAA G P P
Sbjct: 262 APAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAP 317
Score = 26.9 bits (58), Expect = 5.7
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 57 PTRSPAAP----------AGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGV 99
PT +PA P AG P AP+P GV P P AA+ + GV
Sbjct: 291 PTAAPAVPPPAAAQNGGSAGAAP-APAPAAGGPAGVSGQPGPGAAAAAPAPGV 342
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
proline-rich containing [Homo sapiens]
Length = 1435
Score = 40.4 bits (93), Expect = 5e-04
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 18/96 (18%)
Query: 51 YGLIWVP-TRSPAAPAGPQPSAPSPPCAARPGVPPV----PAPAAASLSCLLGVPGGPRP 105
+GL VP S A A P+P +P A P P P+PAA G P GP P
Sbjct: 952 HGLHLVPFIHSAAEEAEPEPELAAPGEDAEPQAGPSARGSPSPAAP------GPPAGPLP 1005
Query: 106 QLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
++ LPL+ P R P+R PR P RP
Sbjct: 1006 RMDLPLA-----GQPLRHPTRARPR--PRRQHHHRP 1034
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 40.0 bits (92), Expect = 7e-04
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRR 116
P++ P AP QP P PP A P P P AA + P+PQ Q P +++
Sbjct: 15 PSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPGGQKQY 74
Query: 117 YSDPDRRPSRQTPRETP 133
++ P+ P P
Sbjct: 75 VTELPAVPAPSQPTGAP 91
Score = 29.6 bits (65), Expect = 0.88
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 58 TRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRY 117
T AAP QP P P A+P PP P PAA P+PQ L +
Sbjct: 7 TELQAAPPPSQP--PQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQ 64
Query: 118 SDP 120
+ P
Sbjct: 65 AQP 67
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 40.0 bits (92), Expect = 7e-04
Identities = 46/144 (31%), Positives = 57/144 (39%), Gaps = 27/144 (18%)
Query: 10 GAESPGGAGLSEGPRGRWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVPTRSPAA--PAGP 67
GA PGGAGL++G + P+ L + L A G P PAA P P
Sbjct: 948 GAGPPGGAGLADGFHRYY---GPIEPQGLGLGLGEARAAPR-GAAGRPLSPPAAQPPQKP 1003
Query: 68 QPS---------APSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYS 118
PS PP A PG P PAP AA+ + + GP PL R
Sbjct: 1004 PPSYFAIVRDKEPAEPPAGAFPGFPSPPAPPAAAATAV-----GP------PLCRLAFED 1052
Query: 119 DPDRRPSRQTPRETPEAAEGRRPG 142
+ P+R PR PE+ PG
Sbjct: 1053 ESPPAPAR-WPRSDPESQPLLGPG 1075
Score = 26.2 bits (56), Expect = 9.7
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 11/76 (14%)
Query: 46 LLAVYYGLIWVPTRSPAAPAGPQPSAPSP-PCAARPGVPPVPAPAAASLSCLLGVPGGPR 104
LLA G+ + A P P P P P A P P P PA P PR
Sbjct: 886 LLAFSRGMYSCCSAEAAPPPAKPPPPPQPLPSPAYPAPRPAPGPA----------PFVPR 935
Query: 105 PQLQLPLSRRRRYSDP 120
+ + RR + + P
Sbjct: 936 ERASVDRWRRTKGAGP 951
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 39.7 bits (91), Expect = 8e-04
Identities = 29/81 (35%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Query: 64 PAGPQPSAPSP---PCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSDP 120
P GP P+A SP P A+ PG P +P A S G+P P LP R R S P
Sbjct: 762 PPGPAPAAASPGPPPPASPPGAP--ASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRP 819
Query: 121 DRRPSRQTPRETPEAAEGRRP 141
P P A RP
Sbjct: 820 LSASQPSLPHGAPGPAASTRP 840
Score = 35.4 bits (80), Expect = 0.016
Identities = 32/94 (34%), Positives = 39/94 (41%), Gaps = 13/94 (13%)
Query: 50 YYGLIWVPTRSPAAPAGPQPSAPSPPCAARPGVP-PVPAPAAASLSCLLGVPG-GPRPQL 107
Y GL P PA PA A P A++P +P P PAA++ P GP P
Sbjct: 795 YGGLPAAPLAGPALPARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTP-- 852
Query: 108 QLPLSRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
+ R PDRR S +P AA G P
Sbjct: 853 ----AARAAAPSPDRRDS-----ASPGAAGGLDP 877
Score = 33.5 bits (75), Expect = 0.061
Identities = 28/98 (28%), Positives = 35/98 (35%), Gaps = 18/98 (18%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPA---------------AASLSCLLGVPG 101
P SP A P P P PP + PP P PA A +L G
Sbjct: 10 PGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEG 69
Query: 102 GPRPQLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEGR 139
GPR +L+ SR P + T + +P GR
Sbjct: 70 GPRGRLR---SRDSSCGRPGTPGAASTAKGSPNGECGR 104
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 39.3 bits (90), Expect = 0.001
Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 8 GGGAESPGGAGLSEGPRGRWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVPTRSPAAPAGP 67
GGG S GG GP G Y+ + AA A R PAG
Sbjct: 78 GGGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEA--AMQRELLPPAGR 135
Query: 68 QP----SAPSPPCAARPGVPPVPAPAAASLSCLLGVPG 101
+P AP P CAA PG P PA AA++ +G G
Sbjct: 136 RPDVLFKAPEPVCAA-PGPPHGPAGAASNFYSAVGRNG 172
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 39.3 bits (90), Expect = 0.001
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 60 SPAAPAGPQPSAPSP-PCAARPGVP-PVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRY 117
+PA P P+ P+P P AA VP P PAPAAA VP P +
Sbjct: 3 TPAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAP------VPAAAPASSSDPAAAAAAT 56
Query: 118 SDPDRRP-SRQTPRETPEAA 136
+ P + P S Q P +TP A
Sbjct: 57 AAPGQTPASAQAPAQTPAPA 76
Score = 29.6 bits (65), Expect = 0.88
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 57 PTRSPAA---PAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLP 110
PT +PAA PA S+ P AA P PA+A P P P L P
Sbjct: 29 PTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPAQTPAPALPGPALPGP 85
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 39.3 bits (90), Expect = 0.001
Identities = 29/90 (32%), Positives = 33/90 (36%), Gaps = 9/90 (10%)
Query: 54 IWVPTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPG--GPRPQLQLPL 111
I P P GP P+ P P G+PP P P A G+PG GP P+L P
Sbjct: 402 IQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPP- 460
Query: 112 SRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
P RP P P G P
Sbjct: 461 ------GPPPGRPPGPPPGPPPGLPPGPPP 484
Score = 32.7 bits (73), Expect = 0.10
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRP 105
P P P GP P P PP P P +P P + L P GP P
Sbjct: 472 PGPPPGLPPGPPPRGP-PPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAP 519
Score = 30.0 bits (66), Expect = 0.67
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 8/54 (14%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLP 110
P R P P GP P P PG PP P G+P PRP + P
Sbjct: 464 PGRPPGPPPGPPPGLP-------PGPPPRGPPPRLPPPAPPGIP-PPRPGMMRP 509
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 38.9 bits (89), Expect = 0.001
Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 61 PAAPAGPQPSAPSPPCAARP----GVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSR 113
PA PAG P P PP P G+PP PAAA G GGP P LP ++
Sbjct: 163 PAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAH-----GAGGGPPPAPPLPAAQ 214
>gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens]
Length = 1292
Score = 38.9 bits (89), Expect = 0.001
Identities = 18/33 (54%), Positives = 20/33 (60%)
Query: 60 SPAAPAGPQPSAPSPPCAARPGVPPVPAPAAAS 92
+PAAPA Q AP+P P PVPAPA AS
Sbjct: 8 TPAAPAPAQAPAPAPEAVPAPAAAPVPAPAPAS 40
Score = 35.8 bits (81), Expect = 0.012
Identities = 17/30 (56%), Positives = 19/30 (63%)
Query: 62 AAPAGPQPSAPSPPCAARPGVPPVPAPAAA 91
A PA P P+AP+P A P VPAPAAA
Sbjct: 2 ADPAAPTPAAPAPAQAPAPAPEAVPAPAAA 31
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 38.9 bits (89), Expect = 0.001
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 56 VPTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGG----PRPQLQLPL 111
+P R PAA P PS P PP +PP P P + S +P G R Q + +
Sbjct: 335 LPPRPPAAQPRPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLIEV 394
Query: 112 SRRRRYSDPDRRPSRQTPRETPE 134
+ + YSD +T E PE
Sbjct: 395 LKGKTYSDGKNHYDMET-TELPE 416
Score = 28.5 bits (62), Expect = 2.0
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 67 PQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRP 105
P+P P PP AA+P PP P P + L P P P
Sbjct: 332 PRPLPPRPP-AAQPRPPPSPPPPPPPPASPLPPPPPPPP 369
>gi|164698460 mannosidase, endo-alpha-like isoform 3 [Homo
sapiens]
Length = 457
Score = 38.9 bits (89), Expect = 0.001
Identities = 20/33 (60%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 59 RSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAA 91
R+PAAPA P P P PP A PG P PAPA A
Sbjct: 60 RAPAAPAAPPPPPP-PPRTADPGGSPGPAPAEA 91
Score = 26.6 bits (57), Expect = 7.4
Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 15/96 (15%)
Query: 39 CVSLAAVLLAVYYGLIWV-----PTRSPA-------APAGPQPSAPSPPCAARPGVP--P 84
C++L VLL + L+ + P PA AP +P P A P P P
Sbjct: 9 CIALFLVLLFAFGTLMGLRTLKAPDGLPALGPGLELAPFERRPEGAPAPAARAPAAPAAP 68
Query: 85 VPAPAAASLSCLLGVPG-GPRPQLQLPLSRRRRYSD 119
P P + G PG P P+ R YSD
Sbjct: 69 PPPPPPPRTADPGGSPGPAPAEAEPAPVQSLRVYSD 104
>gi|72534766 mannosidase, endo-alpha-like isoform 1 [Homo sapiens]
Length = 250
Score = 38.9 bits (89), Expect = 0.001
Identities = 20/33 (60%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 59 RSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAA 91
R+PAAPA P P P PP A PG P PAPA A
Sbjct: 60 RAPAAPAAPPPPPP-PPRTADPGGSPGPAPAEA 91
Score = 26.6 bits (57), Expect = 7.4
Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 15/96 (15%)
Query: 39 CVSLAAVLLAVYYGLIWV-----PTRSPA-------APAGPQPSAPSPPCAARPGVP--P 84
C++L VLL + L+ + P PA AP +P P A P P P
Sbjct: 9 CIALFLVLLFAFGTLMGLRTLKAPDGLPALGPGLELAPFERRPEGAPAPAARAPAAPAAP 68
Query: 85 VPAPAAASLSCLLGVPG-GPRPQLQLPLSRRRRYSD 119
P P + G PG P P+ R YSD
Sbjct: 69 PPPPPPPRTADPGGSPGPAPAEAEPAPVQSLRVYSD 104
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 38.5 bits (88), Expect = 0.002
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 56 VPTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGG----PRPQLQLPL 111
+P R PAA P PS P PP +PP P P + S +P G R Q + +
Sbjct: 269 LPPRPPAAQPRPPPSPPPPPPPPPSPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLIEV 328
Query: 112 SRRRRYSDPDRRPSRQTPRETPE 134
+ + YSD +T E PE
Sbjct: 329 LKGKTYSDGKNHYDMET-TELPE 350
>gi|194239681 tubulin tyrosine ligase-like family, member 10 isoform
1 [Homo sapiens]
Length = 673
Score = 38.5 bits (88), Expect = 0.002
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 56 VPTRSPAAPAGPQPSAPSPPCAARPGVPPV----PAPAAASL-SCLLGVPGGPRPQLQLP 110
+PTR + P P AP P A RP PP+ P P L S G P P +
Sbjct: 588 LPTRQAKSSGPPMPHAPDQPGARRPAPPPLVPQRPRPPGPDLDSAHDGEPQAPGTEQSGT 647
Query: 111 LSRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
+R P + PS T +E E E RP
Sbjct: 648 GNRH-----PAQEPSPGTAKEEREEPENARP 673
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 38.1 bits (87), Expect = 0.002
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 60 SPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRR--RY 117
SPA PAGP +P P RP PP PA A P P P L P RR+ +
Sbjct: 1114 SPARPAGPTEESP-PSAPLRPPEPPAGPPAPAPRPD--ERPSSPIPLLPPPKKRRKTVSF 1170
Query: 118 SDPDRRPSRQTPRETPEAAE 137
S + P+ + P TP A+
Sbjct: 1171 SAIEVVPAPEPPPATPPQAK 1190
Score = 30.8 bits (68), Expect = 0.39
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 10/78 (12%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAP----AAASLSCLLGVPGGPRPQLQLPLS 112
P R P PAGP AP P +P +P P S S + VP P P
Sbjct: 1130 PLRPPEPPAGPPAPAPRPDERPSSPIPLLPPPKKRRKTVSFSAIEVVPAPEPPPATPP-- 1187
Query: 113 RRRRYSDPDRRPSRQTPR 130
+ ++ P SR+ PR
Sbjct: 1188 -QAKFPGP---ASRKAPR 1201
Score = 30.4 bits (67), Expect = 0.52
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
Query: 66 GPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSDPDRRPS 125
G P AP+PP P PP P P S LG P +P LP PD P
Sbjct: 592 GSPPPAPTPPQQPPPPPPPPPPPPPYLASLPLGYP-PHQPAYLLP-------PRPDGPPP 643
Query: 126 RQTPRETP 133
+ P P
Sbjct: 644 PEYPPPPP 651
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 38.1 bits (87), Expect = 0.002
Identities = 42/143 (29%), Positives = 57/143 (39%), Gaps = 23/143 (16%)
Query: 3 GTSCVGGGAESPGGA---GLSEGPRGRWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVPTR 59
G++ GGGA PG GL PR + L P+ + AA A G P R
Sbjct: 78 GSNGNGGGAFRPGSRRLLGLGGPPRPFVVLLLPLASPG--APPAAPTRASPLGARASPPR 135
Query: 60 SPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSD 119
S + A P P P P C PV P SL +PQ Q ++++
Sbjct: 136 SGVSLARPAPGCPRPAC------EPVYGPLTMSL----------KPQQQQQQQQQQQQQQ 179
Query: 120 PDRRPSRQTPRETPEAAEGRRPG 142
++ +Q P P AA R+PG
Sbjct: 180 QQQQQQQQQP--PPAAANVRKPG 200
Score = 29.3 bits (64), Expect = 1.1
Identities = 33/89 (37%), Positives = 39/89 (43%), Gaps = 28/89 (31%)
Query: 62 AAPAGPQPSAPSPPCAARPGVPP--VPAPAAASLSC-----------------LLGVPGG 102
AAP GP PSA PP PG PP +P +AS C LLG+ G
Sbjct: 45 AAP-GPYPSAAPPP--PGPGPPPSRQSSPPSAS-DCFGSNGNGGGAFRPGSRRLLGLGGP 100
Query: 103 PRP--QLQLPLSRRRRYSDPDRRPSRQTP 129
PRP L LPL+ P P+R +P
Sbjct: 101 PRPFVVLLLPLASP---GAPPAAPTRASP 126
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 37.7 bits (86), Expect = 0.003
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 59 RSPAAPAG---PQP------SAPSPPCAARPGVPP-VPAPAAASLSCLLGVPGGPRPQLQ 108
RSP PAG P+P ++PSP A +P PP P PAAA + P P+
Sbjct: 788 RSPVGPAGVRSPRPGSPQMQASPSPGIAPKPKTPPTAPEPAAAVQA--------PLPREP 839
Query: 109 LPLSRRRRYSDPDRRPSRQTPR--ETPEAAEGRRPG 142
L L+ R + P + T R ++P R+PG
Sbjct: 840 LALAGRTAPAQPRAASAPPTDRSPQSPSQGARRQPG 875
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 37.7 bits (86), Expect = 0.003
Identities = 44/156 (28%), Positives = 51/156 (32%), Gaps = 21/156 (13%)
Query: 2 RGTSCVGGGAESP-GGAGLSEGPRG---RWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVP 57
RG GG + P G LS+ R RW R+A A L A P
Sbjct: 543 RGAGASGGPSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQP 602
Query: 58 TRSP----AAPAGPQPSA--------PSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRP 105
T P A P GPQP + P P C PP PAP + VP P+
Sbjct: 603 TSPPPGPVAQPTGPQPQSAGSTSGPVPQPACP-----PPGPAPHPTGPPGPIPVPAPPQI 657
Query: 106 QLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
L + P P TP P G P
Sbjct: 658 ATSTSLLAAQSLVPPPGLPGSSTPGVLPYFPPGLPP 693
Score = 28.5 bits (62), Expect = 2.0
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 67 PQPSAPSPPCAAR---PGVPPVPAPAAASLSCLLGVP 100
P P APS CA P PP P PA ++ L P
Sbjct: 420 PSPWAPSGDCAMESPPPAPPPCPGPAPDTIDLTLQPP 456
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 37.7 bits (86), Expect = 0.003
Identities = 44/156 (28%), Positives = 51/156 (32%), Gaps = 21/156 (13%)
Query: 2 RGTSCVGGGAESP-GGAGLSEGPRG---RWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVP 57
RG GG + P G LS+ R RW R+A A L A P
Sbjct: 543 RGAGASGGPSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQP 602
Query: 58 TRSP----AAPAGPQPSA--------PSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRP 105
T P A P GPQP + P P C PP PAP + VP P+
Sbjct: 603 TSPPPGPVAQPTGPQPQSAGSTSGPVPQPACP-----PPGPAPHPTGPPGPIPVPAPPQI 657
Query: 106 QLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
L + P P TP P G P
Sbjct: 658 ATSTSLLAAQSLVPPPGLPGSSTPGVLPYFPPGLPP 693
Score = 28.5 bits (62), Expect = 2.0
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 67 PQPSAPSPPCAAR---PGVPPVPAPAAASLSCLLGVP 100
P P APS CA P PP P PA ++ L P
Sbjct: 420 PSPWAPSGDCAMESPPPAPPPCPGPAPDTIDLTLQPP 456
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 37.7 bits (86), Expect = 0.003
Identities = 44/156 (28%), Positives = 51/156 (32%), Gaps = 21/156 (13%)
Query: 2 RGTSCVGGGAESP-GGAGLSEGPRG---RWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVP 57
RG GG + P G LS+ R RW R+A A L A P
Sbjct: 543 RGAGASGGPSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQP 602
Query: 58 TRSP----AAPAGPQPSA--------PSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRP 105
T P A P GPQP + P P C PP PAP + VP P+
Sbjct: 603 TSPPPGPVAQPTGPQPQSAGSTSGPVPQPACP-----PPGPAPHPTGPPGPIPVPAPPQI 657
Query: 106 QLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
L + P P TP P G P
Sbjct: 658 ATSTSLLAAQSLVPPPGLPGSSTPGVLPYFPPGLPP 693
Score = 28.5 bits (62), Expect = 2.0
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 67 PQPSAPSPPCAAR---PGVPPVPAPAAASLSCLLGVP 100
P P APS CA P PP P PA ++ L P
Sbjct: 420 PSPWAPSGDCAMESPPPAPPPCPGPAPDTIDLTLQPP 456
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 37.7 bits (86), Expect = 0.003
Identities = 44/156 (28%), Positives = 51/156 (32%), Gaps = 21/156 (13%)
Query: 2 RGTSCVGGGAESP-GGAGLSEGPRG---RWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVP 57
RG GG + P G LS+ R RW R+A A L A P
Sbjct: 404 RGAGASGGPSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQP 463
Query: 58 TRSP----AAPAGPQPSA--------PSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRP 105
T P A P GPQP + P P C PP PAP + VP P+
Sbjct: 464 TSPPPGPVAQPTGPQPQSAGSTSGPVPQPACP-----PPGPAPHPTGPPGPIPVPAPPQI 518
Query: 106 QLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
L + P P TP P G P
Sbjct: 519 ATSTSLLAAQSLVPPPGLPGSSTPGVLPYFPPGLPP 554
Score = 28.5 bits (62), Expect = 2.0
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 67 PQPSAPSPPCAAR---PGVPPVPAPAAASLSCLLGVP 100
P P APS CA P PP P PA ++ L P
Sbjct: 281 PSPWAPSGDCAMESPPPAPPPCPGPAPDTIDLTLQPP 317
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 37.4 bits (85), Expect = 0.004
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 44 AVLLAVYYGLIWVPTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGP 103
A +L+ G+ P P GP P P+PP +PP P P L ++G+P P
Sbjct: 539 AQVLSSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPP----LPGMMGIPPPP 594
Query: 104 RPQL 107
P L
Sbjct: 595 PPPL 598
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 37.4 bits (85), Expect = 0.004
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 44 AVLLAVYYGLIWVPTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGP 103
A +L+ G+ P P GP P P+PP +PP P P L ++G+P P
Sbjct: 539 AQVLSSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPP----LPGMMGIPPPP 594
Query: 104 RPQL 107
P L
Sbjct: 595 PPPL 598
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 37.4 bits (85), Expect = 0.004
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 56 VPTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVP------GGPRPQLQL 109
+P +P PA PS P A P + P P AA+ G P G P P
Sbjct: 1052 LPKGAPTTPAATLPSPKGGP--ATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAAT 1109
Query: 110 PLSRRRRYSDPDRRPSRQTPRETPEAAEG 138
P S + + P + + TP TP + +G
Sbjct: 1110 PPSPKGGLATPPHKGAPTTPAATPPSPKG 1138
Score = 33.9 bits (76), Expect = 0.047
Identities = 20/82 (24%), Positives = 29/82 (35%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRR 116
PT A P P+ +PP P P P+ G P P S +
Sbjct: 1149 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1208
Query: 117 YSDPDRRPSRQTPRETPEAAEG 138
+ P + + TP TP + +G
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKG 1230
Score = 33.9 bits (76), Expect = 0.047
Identities = 27/90 (30%), Positives = 34/90 (37%), Gaps = 19/90 (21%)
Query: 60 SPAAPAG-----PQPSAPSPPCAARP---GVPPVPAPAAASLSCLLGVPGGPRPQLQLPL 111
+P +P G P AP+PP A P G P P P G P P P
Sbjct: 1293 TPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK-----------GAPTPPAVTPP 1341
Query: 112 SRRRRYSDPDRRPSRQTPRETPEAAEGRRP 141
S + + P PS + TP + EG P
Sbjct: 1342 SPKGTPTLPATTPSSKGGPTTPSSKEGPTP 1371
Score = 33.5 bits (75), Expect = 0.061
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 57 PTRSPAAPAGPQ--PSAPSPPCAARP--GVPPVPAPAAASLSCLLGVPGGPRPQLQLPLS 112
PT A P P+ P+ PSP A P PP P A+ S G P P P S
Sbjct: 940 PTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPS----PKGAPTPPAATPPS 995
Query: 113 RRRRYSDPDRRPSRQTPRETPEAAEG 138
+ + P + + P TP + +G
Sbjct: 996 PKGGPATPSPKGAPTPPAVTPPSPKG 1021
Score = 33.1 bits (74), Expect = 0.079
Identities = 20/82 (24%), Positives = 29/82 (35%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRR 116
PT A P P+ +PP P P P+ G P P S +
Sbjct: 1126 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1185
Query: 117 YSDPDRRPSRQTPRETPEAAEG 138
+ P + + TP TP + +G
Sbjct: 1186 LATPSPKGAPTTPAATPPSPKG 1207
Score = 32.7 bits (73), Expect = 0.10
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 55 WVPTRSPAAPAGPQ--PSAPSPPCAARP--GVPPVPAPAAASLSCLLGVPGGPRPQLQLP 110
W PT A P P+ P+ PSP A P PP P A+ S G P P P
Sbjct: 961 WAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPS----PKGAPTPPAVTP 1016
Query: 111 LS-RRRRYSDPDRRPSRQTPRETPEAAEG 138
S + + P + + P TP + +G
Sbjct: 1017 PSPKGSPAATPFPKGASTPPAATPPSPKG 1045
Score = 32.7 bits (73), Expect = 0.10
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRR 116
P SPAA P+ AP+ P A P P PA SL G P P P S +
Sbjct: 1043 PKGSPAATPLPK-GAPTTPAATLPS--PKGGPATPSLK------GAPTPPAATPPSPKGG 1093
Query: 117 YSDPDRRPSRQTPRETPEAAEG 138
+ P + + P TP + +G
Sbjct: 1094 PATPSPKGAPMPPAATPPSPKG 1115
Score = 32.7 bits (73), Expect = 0.10
Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 20/102 (19%)
Query: 57 PTRSPAAPAG-----PQPSAPSPPCAARPGV------PP---VPAPAAASLSCLLGVP-- 100
P +P +P G P AP+PP A P + PP P PA + G P
Sbjct: 1244 PAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPAT 1303
Query: 101 ----GGPRPQLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEG 138
G P P P S + P + + P TP + +G
Sbjct: 1304 SPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG 1345
Score = 32.0 bits (71), Expect = 0.18
Identities = 27/102 (26%), Positives = 36/102 (35%), Gaps = 20/102 (19%)
Query: 57 PTRSPAAPAG-----PQPSAPSPPCAARP------------GVPPVPAPAAASLSCLLGV 99
P +P +P G P AP+ P A P G P PA S L
Sbjct: 1152 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1211
Query: 100 P---GGPRPQLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEG 138
P G P P S + + P + + TP TP + +G
Sbjct: 1212 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1253
Score = 31.6 bits (70), Expect = 0.23
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 56 VPTRSPAAPAGPQ-PSA---PSPPCA--ARPGVPPVPAPAAASLSCLLGVPGGPRPQLQL 109
+P +P++ GP PS+ P+PP A + G P + P+ + G P +
Sbjct: 1349 LPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVI 1408
Query: 110 PLSRRRRYSDPDRRPSRQTPRE---TPEA 135
PLS ++ + P R TP + TP A
Sbjct: 1409 PLSPKKAPATPVTREGAATPSKGDLTPPA 1437
Score = 30.8 bits (68), Expect = 0.39
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARP--GVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRR 114
P +P +P G + P P A+ P PP P + A+ G P P L P +
Sbjct: 1012 PAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP---K 1068
Query: 115 RRYSDPDRRPSRQTPRETPEAAEG 138
+ P + + P TP + +G
Sbjct: 1069 GGPATPSLKGAPTPPAATPPSPKG 1092
Score = 30.0 bits (66), Expect = 0.67
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 58 TRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLS 112
+ SP P P S S P A +P P +AS+S P P + LPL+
Sbjct: 1755 SHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVS------AAPSPPVSLPLA 1803
Score = 28.1 bits (61), Expect = 2.6
Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRR 116
P PA PA Q A S ++ PAP S G P P P S +
Sbjct: 896 PKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPAS--PSPKGAPTPPAATPPSPKGG 953
Query: 117 YSDPDRRPSRQTPRETPEAAEG 138
+ P + + P TP + +G
Sbjct: 954 PATPSPKWAPTPPAATPPSPKG 975
Score = 27.3 bits (59), Expect = 4.4
Identities = 18/82 (21%), Positives = 27/82 (32%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRR 116
PT A P P+ +P P P P+ G P P S +
Sbjct: 1195 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1254
Query: 117 YSDPDRRPSRQTPRETPEAAEG 138
+ P + + P TP + +G
Sbjct: 1255 PATPPPKGAPTPPAATPPSLKG 1276
Score = 26.9 bits (58), Expect = 5.7
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 58 TRSPAAPA---GPQPSAPSPPCAARPGVPP--VPAPAAASLSCLLGVPGGPRPQLQLPLS 112
T SP P+ P PSA +P +PP P P+ +L P P P+ LS
Sbjct: 853 THSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALS 912
Query: 113 RRRRYSDPDRRPSRQTPRETP 133
S P + + P+ P
Sbjct: 913 MTS--SSPKKARATPAPKGIP 931
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 37.0 bits (84), Expect = 0.006
Identities = 42/142 (29%), Positives = 56/142 (39%), Gaps = 40/142 (28%)
Query: 33 VCAYFL-CVSLAAVLLAVYYGLI-W-------VPTRSPAAPAGPQPSAPSPP-------- 75
VC++FL C + + A + GL W + R+P P+GP P +P+PP
Sbjct: 198 VCSFFLPCPLMLLLYWATFRGLQRWEVARRAKLHGRAPRRPSGPGPPSPTPPAPRLPQDP 257
Query: 76 ----CA-ARPGVPPVP-----APAAASL-------SCLLGVPGGPRPQLQLPLSRRRRYS 118
CA PG+P P APAA SL C PG P P +
Sbjct: 258 CGPDCAPPAPGLPRGPCGPDCAPAAPSLPQDPCGPDCAPPAPGLP------PDPCGSNCA 311
Query: 119 DPDRRPSRQTPRETPEAAEGRR 140
PD + P +TP RR
Sbjct: 312 PPDAVRAAALPPQTPPQTRRRR 333
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 37.0 bits (84), Expect = 0.006
Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 PTRSPAAPAGPQPSAPSPP--CAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRR 114
PTRSPA A P P A P PP APAA + P PRP+ QL R
Sbjct: 94 PTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPA------QPPAPRPESQLS-DRP 146
Query: 115 RRYSDPDRRPSR 126
+ + R P R
Sbjct: 147 QSWEQKPRGPGR 158
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 37.0 bits (84), Expect = 0.006
Identities = 33/91 (36%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 60 SPAAPAGP--QPSAPS--PPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQL----QLPL 111
SPA PA P P AP+ PP A +P P P P + +L G PRP + P
Sbjct: 104 SPADPAAPPSSPHAPTRPPPQAVQPR-PSEPTPGSEALPPGSLPEGEPRPYALPPRESPA 162
Query: 112 SRRRRYSDP-DRRPSRQTPRETPEAAEGRRP 141
R R+ DP P R P P A RP
Sbjct: 163 PRPFRWGDPFSPAPPRPQPPSRPAAQPPSRP 193
Score = 34.7 bits (78), Expect = 0.027
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 16/86 (18%)
Query: 57 PTRSPAAPAGPQPSAPSPPCAARP------------GVPPVPAPAAASLSCLLGVPGGPR 104
PTR P P+PS P+P A P +PP +PA G P P
Sbjct: 118 PTRPPPQAVQPRPSEPTPGSEALPPGSLPEGEPRPYALPPRESPAPRPFR--WGDPFSPA 175
Query: 105 PQLQLPLSRRRRYSDPDRRPSRQTPR 130
P P SR + P RP+ ++PR
Sbjct: 176 PPRPQPPSRPA--AQPPSRPAFRSPR 199
Score = 29.3 bits (64), Expect = 1.1
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 61 PAAPAGPQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSDP 120
P +PA P+P PS P A P P +P GP P+ + ++ P
Sbjct: 171 PFSPAPPRPQPPSRPAAQPPSRPAFRSPRPVR---------GPHPRRAVVVAVLFGVQAP 221
Query: 121 DRRPSRQTPRETPEAAEGRRPG 142
R+ E +GRRPG
Sbjct: 222 -----RRDVAEGGLRRDGRRPG 238
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,925,255
Number of Sequences: 37866
Number of extensions: 637206
Number of successful extensions: 13016
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 1020
Number of HSP's that attempted gapping in prelim test: 6470
Number of HSP's gapped (non-prelim): 5759
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.