Guide to the Human Genome
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Name: PTPN18 Sequence: fasta or formatted (353aa) NCBI GI: 215277017
Description:

protein tyrosine phosphatase, non-receptor type 18 isoform 2

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [460aa] protein tyrosine phosphatase, non-receptor type 18 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         35           2
 C cysteine            2.3          8           1
 D aspartate           4.0         14           2
 E glutamate           5.9         21           2
 F phenylalanine       2.8         10           1
 G glycine             9.9         35           2
 H histidine           1.7          6           1
 I isoleucine          2.3          8           1
 K lysine              3.1         11           1
 L leucine             9.1         32           3
 M methionine          2.5          9           1
 N asparagine          1.4          5           1
 P proline             7.9         28           2
 Q glutamine           5.9         21           1
 R arginine            8.5         30           2
 S serine              6.5         23           2
 T threonine           5.9         21           1
 V valine              5.9         21           2
 W tryptophan          1.1          4           1
 Y tyrosine            3.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, non-receptor type 18 ... 
PTPN18                0.918   protein tyrosine phosphatase, non-receptor type 18 i...
PTPN22                0.188   protein tyrosine phosphatase, non-receptor type 22 ...
PTPN22                0.188   protein tyrosine phosphatase, non-receptor type 22 ...
PTPN12                0.174   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN12                0.174   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN12                0.174   protein tyrosine phosphatase, non-receptor type 12 ...
PTPRH                 0.111   protein tyrosine phosphatase, receptor type, H isof...
PTPRH                 0.111   protein tyrosine phosphatase, receptor type, H isof...
PTPN11                0.106   protein tyrosine phosphatase, non-receptor type 11 [...
PTPN6                 0.106   protein tyrosine phosphatase, non-receptor type 6 is...
PTPN6                 0.106   protein tyrosine phosphatase, non-receptor type 6 is...
PTPN6                 0.106   protein tyrosine phosphatase, non-receptor type 6 is...
PTPN20B               0.102   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.102   protein tyrosine phosphatase, non-receptor type 20A...
PTPN4                 0.098   protein tyrosine phosphatase, non-receptor type 4 [Ho...
PTPN20B               0.096   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.096   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20A               0.096   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20A               0.096   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20A               0.096   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.096   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20B               0.096   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20B               0.096   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN3                 0.095   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.095   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.095   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.095   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.095   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.095   protein tyrosine phosphatase, non-receptor type 3 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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