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Search of human proteins with 30425382
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30425382 signal-regulatory protein delta [Homo sapiens]
(197 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30425382 signal-regulatory protein delta [Homo sapiens] 410 e-115
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 141 3e-34
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ... 139 2e-33
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ... 139 2e-33
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 135 2e-32
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ... 135 3e-32
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 130 9e-31
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi... 123 9e-29
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi... 123 9e-29
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi... 123 9e-29
gi|169217521 PREDICTED: similar to signal-regulatory protein bet... 111 5e-25
gi|239751927 PREDICTED: similar to signal-regulatory protein bet... 111 5e-25
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 94 7e-20
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 94 7e-20
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ... 79 2e-15
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa... 79 3e-15
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa... 79 3e-15
gi|5453613 CD7 antigen precursor [Homo sapiens] 46 2e-05
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 39 0.002
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 39 0.002
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 39 0.004
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 39 0.004
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 39 0.004
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 38 0.006
gi|49574534 T cell immunoglobulin mucin 3 [Homo sapiens] 37 0.014
gi|99028881 V-set domain containing T cell activation inhibitor ... 37 0.014
gi|62865876 immunoglobulin superfamily, member 11 isoform b [Hom... 36 0.019
gi|237858679 neurofascin isoform 3 precursor [Homo sapiens] 35 0.041
gi|237858677 neurofascin isoform 2 precursor [Homo sapiens] 35 0.041
gi|89903008 neurofascin isoform 4 precursor [Homo sapiens] 35 0.041
>gi|30425382 signal-regulatory protein delta [Homo sapiens]
Length = 197
Score = 410 bits (1053), Expect = e-115
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MPIPASPLHPPLPSLLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNG 60
MPIPASPLHPPLPSLLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNG
Sbjct: 1 MPIPASPLHPPLPSLLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNG 60
Query: 61 PVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKF 120
PVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKF
Sbjct: 61 PVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKF 120
Query: 121 IKGRAIKEYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLSALPERNSTNYFV 180
IKGRAIKEYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLSALPERNSTNYFV
Sbjct: 121 IKGRAIKEYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLSALPERNSTNYFV 180
Query: 181 QPCCCLRLLGLTGLLSK 197
QPCCCLRLLGLTGLLSK
Sbjct: 181 QPCCCLRLLGLTGLLSK 197
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 141 bits (356), Expect = 3e-34
Identities = 83/172 (48%), Positives = 106/172 (61%), Gaps = 5/172 (2%)
Query: 1 MPIPASPLHPPLPSLLLYLLL-ELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTL 57
MP+PAS H P P LL+ LLL L GV +Q Q + S +V+ GES L C+V +
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
Query: 58 PNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYC 117
P GP+ WF+G GP R+LIYN K+G+FPRV + D TK N DFS RI I+ ADAGTYYC
Sbjct: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
Query: 118 VKFIKGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
VKF KG E++SG GT++ V + P + PA RA + H + TC S
Sbjct: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARA-TPQHTVSFTCES 171
>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
Length = 276
Score = 139 bits (350), Expect = 2e-33
Identities = 82/171 (47%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Query: 1 MPIPASPLHPPLPSLLLYLLLELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTLP 58
MP+PAS HPP P LLL LLL L V +Q Q E V+ G++ L C+V LP
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
Query: 59 NGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCV 118
GPVLWF+G GP R+LIYN K+G+FPRV + D TK N DFS RI I+ AD GTYYCV
Sbjct: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
Query: 119 KFIKGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
KF KG E++SG GT++ + + P PA R + H + TC S
Sbjct: 121 KFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAART-TPEHTVSFTCES 170
>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
[Homo sapiens]
Length = 387
Score = 139 bits (350), Expect = 2e-33
Identities = 82/171 (47%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Query: 1 MPIPASPLHPPLPSLLLYLLLELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTLP 58
MP+PAS HPP P LLL LLL L V +Q Q E V+ G++ L C+V LP
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
Query: 59 NGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCV 118
GPVLWF+G GP R+LIYN K+G+FPRV + D TK N DFS RI I+ AD GTYYCV
Sbjct: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
Query: 119 KFIKGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
KF KG E++SG GT++ + + P PA R + H + TC S
Sbjct: 121 KFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAART-TPEHTVSFTCES 170
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 135 bits (340), Expect = 2e-32
Identities = 80/172 (46%), Positives = 105/172 (61%), Gaps = 5/172 (2%)
Query: 1 MPIPASPLHPPLPSLLLYLLL-ELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTL 57
MP+PAS H P P LL+ LLL L GV +Q Q E S +V+ GES L C++ +
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 58 PNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYC 117
P GP++WF+G G R+LIYN K+G+FPRV + + TK N DFS I I+ ADAGTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 118 VKFIKGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
VKF KG E++SG GT++ V + P + PA RA + H + TC S
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRA-TPEHTVSFTCES 171
>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
[Homo sapiens]
Length = 170
Score = 135 bits (339), Expect = 3e-32
Identities = 74/140 (52%), Positives = 90/140 (64%), Gaps = 3/140 (2%)
Query: 1 MPIPASPLHPPLPSLLLYLLLELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTLP 58
MP+PAS HPP P LLL LLL L V +Q Q E V+ G++ L C+V LP
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
Query: 59 NGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCV 118
GPVLWF+G GP R+LIYN K+G+FPRV + D TK N DFS RI I+ AD GTYYCV
Sbjct: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
Query: 119 KFIKGRAIK-EYQSGRGTQV 137
KF KG E++SG GT++
Sbjct: 121 KFRKGSPENVEFKSGPGTEM 140
>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
[Homo sapiens]
Length = 181
Score = 130 bits (326), Expect = 9e-31
Identities = 72/145 (49%), Positives = 93/145 (64%), Gaps = 4/145 (2%)
Query: 1 MPIPASPLHPPLPSLLLYLLL-ELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTL 57
MP+PAS H P P LL+ LLL L GV +Q Q E S +V+ GES L C++ +
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 58 PNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYC 117
P GP++WF+G G R+LIYN K+G+FPRV + + TK N DFS I I+ ADAGTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 118 VKFIKGRAIK-EYQSGRGTQVFVTE 141
VKF KG E++SG GT++ V E
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVRE 145
>gi|18426911 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 123 bits (309), Expect = 9e-29
Identities = 74/168 (44%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 4 PASPLHPPLPSLLLYLLLELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTLPNGP 61
PA PL LLL +GV +Q Q + S V+ GE+ L C+ +P GP
Sbjct: 6 PAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGP 65
Query: 62 VLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKFI 121
+ WF+G GP R+LIYN K+G+FPRV + D TK N DFS RI I+ ADAGTYYCVKF
Sbjct: 66 IQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFR 125
Query: 122 KGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
KG E++SG GT++ V + P + PA RA + H + TC S
Sbjct: 126 KGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAARA-TPQHTVSFTCES 172
>gi|91105767 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 123 bits (309), Expect = 9e-29
Identities = 74/168 (44%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 4 PASPLHPPLPSLLLYLLLELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTLPNGP 61
PA PL LLL +GV +Q Q + S V+ GE+ L C+ +P GP
Sbjct: 6 PAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGP 65
Query: 62 VLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKFI 121
+ WF+G GP R+LIYN K+G+FPRV + D TK N DFS RI I+ ADAGTYYCVKF
Sbjct: 66 IQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFR 125
Query: 122 KGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
KG E++SG GT++ V + P + PA RA + H + TC S
Sbjct: 126 KGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAARA-TPQHTVSFTCES 172
>gi|91105764 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 123 bits (309), Expect = 9e-29
Identities = 74/168 (44%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 4 PASPLHPPLPSLLLYLLLELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTLPNGP 61
PA PL LLL +GV +Q Q + S V+ GE+ L C+ +P GP
Sbjct: 6 PAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGP 65
Query: 62 VLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKFI 121
+ WF+G GP R+LIYN K+G+FPRV + D TK N DFS RI I+ ADAGTYYCVKF
Sbjct: 66 IQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFR 125
Query: 122 KGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
KG E++SG GT++ V + P + PA RA + H + TC S
Sbjct: 126 KGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAARA-TPQHTVSFTCES 172
>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 160
Score = 111 bits (277), Expect = 5e-25
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 32 VQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGD 91
V Q E S +V+ GES L C++ +P GP++WF+G G R+LIYN K+G+FPRV + +
Sbjct: 18 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSE 77
Query: 92 TTKPGNTDFSTRIREISLADAGTYYCVKFIKGRAIK-EYQSGRGTQVFV 139
TK N DFS I I+ ADAGTYYCVKF KG E++SG GT++ V
Sbjct: 78 LTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 136
Score = 111 bits (277), Expect = 5e-25
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 32 VQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGD 91
V Q E S +V+ GES L C++ +P GP++WF+G G R+LIYN K+G+FPRV + +
Sbjct: 18 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSE 77
Query: 92 TTKPGNTDFSTRIREISLADAGTYYCVKFIKGRAIK-EYQSGRGTQVFV 139
TK N DFS I I+ ADAGTYYCVKF KG E++SG GT++ V
Sbjct: 78 LTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
Length = 651
Score = 94.0 bits (232), Expect = 7e-20
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 32 VQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGD 91
V Q E +V+ GE L+C+V LP GP+ WF+G P +KLIY+ K+ + PRV I D
Sbjct: 517 VIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISD 576
Query: 92 TTKPGNTDFSTRIREISLADAGTYYCVKFIKG-RAIKEYQSGRGTQVFV 139
K +TD+S RI I+L DAGTYYC+K + A E +SG GTQ+ V
Sbjct: 577 QRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSV 625
Score = 79.0 bits (193), Expect = 2e-15
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 61 PVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKF 120
P WFKGT ++LIY+ K G+FP++ I D TK NTDFS I I+ A+ GTY CVKF
Sbjct: 429 PEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKF 488
Query: 121 IKGRAIKEYQSGRGTQVFV 139
KG E +SG GT++ V
Sbjct: 489 WKGGPDMELKSGPGTELSV 507
>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
Length = 651
Score = 94.0 bits (232), Expect = 7e-20
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 32 VQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGD 91
V Q E +V+ GE L+C+V LP GP+ WF+G P +KLIY+ K+ + PRV I D
Sbjct: 517 VIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISD 576
Query: 92 TTKPGNTDFSTRIREISLADAGTYYCVKFIKG-RAIKEYQSGRGTQVFV 139
K +TD+S RI I+L DAGTYYC+K + A E +SG GTQ+ V
Sbjct: 577 QRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSV 625
Score = 79.0 bits (193), Expect = 2e-15
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 61 PVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKF 120
P WFKGT ++LIY+ K G+FP++ I D TK NTDFS I I+ A+ GTY CVKF
Sbjct: 429 PEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKF 488
Query: 121 IKGRAIKEYQSGRGTQVFV 139
KG E +SG GT++ V
Sbjct: 489 WKGGPDMELKSGPGTELSV 507
>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
sapiens]
Length = 532
Score = 79.3 bits (194), Expect = 2e-15
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 61 PVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKF 120
P WFKGT ++LIY+ K G+FP++ I D TK NTDFS I I+ A+ GTY CVKF
Sbjct: 429 PEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKF 488
Query: 121 IKGRAIKEYQSGRGTQVFVTEQNP----RPP 147
KG E +SG GT++ V + RPP
Sbjct: 489 WKGGPDMELKSGPGTELSVHSEYSVGLLRPP 519
>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
sapiens]
Length = 244
Score = 78.6 bits (192), Expect = 3e-15
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 42 STGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFS 101
+TG+++ L+C+V P GP+ WF+G G +R+ IYNF G KE + N DFS
Sbjct: 73 TTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNF--GGISHPKE--TAVQASNNDFS 128
Query: 102 TRIREISLADAGTYYCVKFIKGRAIKEYQSGRGTQVFV 139
++ +S DAGTYYCVKF + + ++Y SG+GT + V
Sbjct: 129 ILLQNVSSEDAGTYYCVKF-QRKPNRQYLSGQGTSLKV 165
>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
sapiens]
Length = 342
Score = 78.6 bits (192), Expect = 3e-15
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 42 STGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFS 101
+TG+++ L+C+V P GP+ WF+G G +R+ IYNF G KE + N DFS
Sbjct: 171 TTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNF--GGISHPKE--TAVQASNNDFS 226
Query: 102 TRIREISLADAGTYYCVKFIKGRAIKEYQSGRGTQVFV 139
++ +S DAGTYYCVKF + + ++Y SG+GT + V
Sbjct: 227 ILLQNVSSEDAGTYYCVKF-QRKPNRQYLSGQGTSLKV 263
Score = 73.9 bits (180), Expect = 8e-14
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 1 MPIPASPLHPPLPSLLLYLLLELAGVT-----HVFHVQQTEMSQTVSTGESIILSCSVPD 55
M P H P LLL L+L + + + + V Q E V+ GE+++L C V
Sbjct: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
Query: 56 TLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKE-IGDTTKPGNTDFSTRIREISLADAGT 114
+ +G + W K + +++ IYNFK+G+FP V I T++P N D+S I ++ GT
Sbjct: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
Query: 115 YYCVKFIKGRAIKEYQSGRGTQVFV 139
Y+CV+F E +S GT V V
Sbjct: 125 YHCVRFDGLSEHSEMKSDEGTSVLV 149
>gi|5453613 CD7 antigen precursor [Homo sapiens]
Length = 240
Score = 46.2 bits (108), Expect = 2e-05
Identities = 58/186 (31%), Positives = 76/186 (40%), Gaps = 33/186 (17%)
Query: 5 ASPLHPPLPSLLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNGPVLW 64
A P L LLL L L G VQQ+ TV G S+ ++CS L ++
Sbjct: 2 AGPPRLLLLPLLLALARGLPGALAAQEVQQSPHCTTVPVGASVNITCSTSGGLRG---IY 58
Query: 65 FKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFS-------TRIREISLADAGTYYC 117
+ GP + I ++ G P D G DFS + + L+D GTY C
Sbjct: 59 LRQLGPQPQDIIYYEDGVVPTT----DRRFRGRIDFSGSQDNLTITMHRLQLSDTGTYTC 114
Query: 118 VKFIKGRAIKEYQ-SGRGTQVFVTEQNPR--------PPKNR--PAGRAGSRAHHDAHTC 166
+AI E G GT V VTE+ + PP+ PA GS A D T
Sbjct: 115 ------QAITEVNVYGSGTLVLVTEEQSQGWHRCSDAPPRASALPAPPTGS-ALPDPQTA 167
Query: 167 LSALPE 172
SALP+
Sbjct: 168 -SALPD 172
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 39.3 bits (90), Expect = 0.002
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 15 LLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFK---GTGPN 71
LL LLL L T + Q+ + ++S GE LSC ++ + + W++ G P
Sbjct: 7 LLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAP- 65
Query: 72 RKLIYNFKQGNFPRVKEIGD--TTKPGNTDFSTRIREISLADAGTYYCVKF 120
R LIY+ R I D + TDF+ I + D YYC ++
Sbjct: 66 RLLIYDASS----RATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQY 112
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 39.3 bits (90), Expect = 0.002
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 15 LLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFK---GTGPN 71
LL LLL L T + Q+ + ++S GE LSC ++ + + W++ G P
Sbjct: 7 LLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAP- 65
Query: 72 RKLIYNFKQGNFPRVKEIGD--TTKPGNTDFSTRIREISLADAGTYYCVKF 120
R LIY+ R I D + TDF+ I + D YYC ++
Sbjct: 66 RLLIYDASS----RATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQY 112
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 38.5 bits (88), Expect = 0.004
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 15 LLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFK---GTGPN 71
LL LLL L G V Q+ S + S G+ + ++C + NG + W++ G P
Sbjct: 9 LLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSWYQQKPGQAPT 67
Query: 72 RKLIY---NFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVK 119
LIY + + G R G TDF+ I + D TYYC++
Sbjct: 68 -LLIYAASSLQSGVPSRFSGSG-----SGTDFTLTISSLQPEDVATYYCLQ 112
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 38.5 bits (88), Expect = 0.004
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 15 LLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFK---GTGPN 71
LL LLL L G V Q+ S + S G+ + ++C + NG + W++ G P
Sbjct: 9 LLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSWYQQKPGQAPT 67
Query: 72 RKLIY---NFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVK 119
LIY + + G R G TDF+ I + D TYYC++
Sbjct: 68 -LLIYAASSLQSGVPSRFSGSG-----SGTDFTLTISSLQPEDVATYYCLQ 112
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 38.5 bits (88), Expect = 0.004
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 15 LLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFK---GTGPN 71
LL LLL L G V Q+ S + S G+ + ++C + NG + W++ G P
Sbjct: 9 LLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSWYQQKPGQAPT 67
Query: 72 RKLIY---NFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVK 119
LIY + + G R G TDF+ I + D TYYC++
Sbjct: 68 -LLIYAASSLQSGVPSRFSGSG-----SGTDFTLTISSLQPEDVATYYCLQ 112
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 37.7 bits (86), Expect = 0.006
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 22/114 (19%)
Query: 15 LLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKL 74
LL LLL L T + Q+ + ++S GE LSC ++ + + W
Sbjct: 7 LLFLLLLWLPDTTGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSW---------- 56
Query: 75 IYNFKQGNFPRVKEIGDTTKP-----------GNTDFSTRIREISLADAGTYYC 117
Y K G PR+ G +T+ TDF+ I + D YYC
Sbjct: 57 -YQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVYYC 109
>gi|49574534 T cell immunoglobulin mucin 3 [Homo sapiens]
Length = 301
Score = 36.6 bits (83), Expect = 0.014
Identities = 50/183 (27%), Positives = 71/183 (38%), Gaps = 27/183 (14%)
Query: 9 HPPLPSLLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDTLPNG--PVLWFK 66
H P +LL LLL L + +E+ G++ L C P PV W K
Sbjct: 4 HLPFDCVLLLLLLLLT--------RSSEVEYRAEVGQNAYLPCFYTPAAPGNLVPVCWGK 55
Query: 67 GTGP-----NRKLIYNFKQGNF--PRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVK 119
G P N L + + N+ R GD K D S I ++LAD+G Y C
Sbjct: 56 GACPVFECGNVVLRTDERDVNYWTSRYWLNGDFRKG---DVSLTIENVTLADSGIYCCRI 112
Query: 120 FIKGRAIKEYQSGRGTQVFVTEQNPRPPKNRPAGRA-----GSRAHHDAHT-CLSALPER 173
I G + + + + + P P + R A +R H A T L +LP+
Sbjct: 113 QIPG-IMNDEKFNLKLVIKPAKVTPAPTRQRDFTAAFPRMLTTRGHGPAETQTLGSLPDI 171
Query: 174 NST 176
N T
Sbjct: 172 NLT 174
>gi|99028881 V-set domain containing T cell activation inhibitor 1
[Homo sapiens]
Length = 282
Score = 36.6 bits (83), Expect = 0.014
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 25 GVTHVFHVQQTEMSQTVSTGESIILSCSV-PDTLPNGPVLWFKGTGPNRKLIYNFKQGNF 83
G++ + T ++ + GE ILSC+ PD + V+ + G L++ FK+G
Sbjct: 30 GISGRHSITVTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGV-LGLVHEFKEGKD 88
Query: 84 P----------RVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKFI---KGRAIKEYQ 130
R D GN S R++ + L DAGTY C KG A EY+
Sbjct: 89 ELSEQDEMFRGRTAVFADQVIVGNA--SLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 146
Query: 131 SG 132
+G
Sbjct: 147 TG 148
>gi|62865876 immunoglobulin superfamily, member 11 isoform b [Homo
sapiens]
Length = 431
Score = 36.2 bits (82), Expect = 0.019
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 17/123 (13%)
Query: 6 SPLHPPLPSLLLYLLLELAGVTHVFHVQQTEMSQTVSTGESIILSCSVPDT--LPNGPVL 63
SPL P LLL L GV V ++ S V+ G+ +L C+ + L N V+
Sbjct: 6 SPLAP-------LLLLSLHGVAASLEVSESPGSIQVARGQPAVLPCTFTTSAALINLNVI 58
Query: 64 WF-----KGTGPNRKLIYNFKQ--GNFPRVK-EIGDTTKPGNTDFSTRIREISLADAGTY 115
W P + ++Y Q PR +G T T+ S I L+D GTY
Sbjct: 59 WMVTPLSNANQPEQVILYQGGQMFDGAPRFHGRVGFTGTMPATNVSIFINNTQLSDTGTY 118
Query: 116 YCV 118
C+
Sbjct: 119 QCL 121
>gi|237858679 neurofascin isoform 3 precursor [Homo sapiens]
Length = 1174
Score = 35.0 bits (79), Expect = 0.041
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 18/101 (17%)
Query: 33 QQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDT 92
Q T SQ V G ++L C + +P + W+K K G+ P D
Sbjct: 261 QGTASSQMVLRGMDLLLEC-IASGVPTPDIAWYK------------KGGDLP-----SDK 302
Query: 93 TKPGNTDFSTRIREISLADAGTYYCVKFIKGRAIKEYQSGR 133
K N + + RI +S D+G Y+C+ K +I+ S R
Sbjct: 303 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVR 343
>gi|237858677 neurofascin isoform 2 precursor [Homo sapiens]
Length = 1189
Score = 35.0 bits (79), Expect = 0.041
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 18/101 (17%)
Query: 33 QQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDT 92
Q T SQ V G ++L C + +P + W+K K G+ P D
Sbjct: 261 QGTASSQMVLRGMDLLLEC-IASGVPTPDIAWYK------------KGGDLP-----SDK 302
Query: 93 TKPGNTDFSTRIREISLADAGTYYCVKFIKGRAIKEYQSGR 133
K N + + RI +S D+G Y+C+ K +I+ S R
Sbjct: 303 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVR 343
>gi|89903008 neurofascin isoform 4 precursor [Homo sapiens]
Length = 1169
Score = 35.0 bits (79), Expect = 0.041
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 18/101 (17%)
Query: 33 QQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDT 92
Q T SQ V G ++L C + +P + W+K K G+ P D
Sbjct: 261 QGTASSQMVLRGMDLLLEC-IASGVPTPDIAWYK------------KGGDLP-----SDK 302
Query: 93 TKPGNTDFSTRIREISLADAGTYYCVKFIKGRAIKEYQSGR 133
K N + + RI +S D+G Y+C+ K +I+ S R
Sbjct: 303 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVR 343
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,035,177
Number of Sequences: 37866
Number of extensions: 435175
Number of successful extensions: 1820
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 1705
Number of HSP's gapped (non-prelim): 216
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.