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Search of human proteins with 30410805
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30410805 CUB domain-containing protein 1 isoform 1 [Homo
sapiens]
(836 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30410805 CUB domain-containing protein 1 isoform 1 [Homo sapi... 1697 0.0
gi|30410803 CUB domain-containing protein 1 isoform 2 [Homo sapi... 689 0.0
gi|153792110 HEG homolog 1 [Homo sapiens] 40 0.007
gi|73623026 mannan-binding lectin serine protease 1 isoform 3 [H... 40 0.012
gi|21264359 mannan-binding lectin serine protease 1 isoform 2 pr... 40 0.012
gi|21264357 mannan-binding lectin serine protease 1 isoform 1 pr... 40 0.012
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 36 0.13
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 36 0.13
gi|157653329 procollagen C-endopeptidase enhancer [Homo sapiens] 35 0.29
gi|148727370 immediate early response 5-like [Homo sapiens] 34 0.49
gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2) int... 33 1.1
gi|54792129 discoidin, CUB and LCCL domain containing 2 [Homo sa... 33 1.1
gi|6912724 tolloid-like 2 [Homo sapiens] 33 1.4
gi|40353729 Ras and Rab interactor 3 [Homo sapiens] 33 1.4
gi|24308436 methionine-tRNA synthetase 2 precursor [Homo sapiens] 33 1.4
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 32 1.9
gi|4507399 transcription factor 4 isoform b [Homo sapiens] 32 2.4
gi|145312267 transcription factor 4 isoform a [Homo sapiens] 32 2.4
gi|11415052 retinoid X receptor, beta [Homo sapiens] 32 2.4
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 32 2.4
gi|22547221 tolloid-like 1 [Homo sapiens] 32 2.4
gi|92110053 CUB and Sushi multiple domains 2 [Homo sapiens] 32 2.4
gi|47132519 Ras association and pleckstrin homology domains 1 is... 32 2.4
gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I... 32 2.4
gi|21361077 calcium channel, voltage-dependent, T type, alpha 1I... 32 2.4
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 32 3.2
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 32 3.2
gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo s... 32 3.2
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 32 3.2
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 32 3.2
>gi|30410805 CUB domain-containing protein 1 isoform 1 [Homo
sapiens]
Length = 836
Score = 1697 bits (4394), Expect = 0.0
Identities = 836/836 (100%), Positives = 836/836 (100%)
Query: 1 MAGLNCGVSIALLGVLLLGAARLPRGAEAFEIALPRESNITVLIKLGTPTLLAKPCYIVI 60
MAGLNCGVSIALLGVLLLGAARLPRGAEAFEIALPRESNITVLIKLGTPTLLAKPCYIVI
Sbjct: 1 MAGLNCGVSIALLGVLLLGAARLPRGAEAFEIALPRESNITVLIKLGTPTLLAKPCYIVI 60
Query: 61 SKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSGPCPFGEVQLQPSTSLLPT 120
SKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSGPCPFGEVQLQPSTSLLPT
Sbjct: 61 SKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSGPCPFGEVQLQPSTSLLPT 120
Query: 121 LNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVTHSISGRIDATVVRIGTFCSN 180
LNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVTHSISGRIDATVVRIGTFCSN
Sbjct: 121 LNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVTHSISGRIDATVVRIGTFCSN 180
Query: 181 GTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIKRLCIIESVFEGEGSATLMSANY 240
GTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIKRLCIIESVFEGEGSATLMSANY
Sbjct: 181 GTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIKRLCIIESVFEGEGSATLMSANY 240
Query: 241 PEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIPGSTTNPEVFKLEDK 300
PEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIPGSTTNPEVFKLEDK
Sbjct: 241 PEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIPGSTTNPEVFKLEDK 300
Query: 301 QPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNESNKIYVVDLSNERAMSLTIE 360
QPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNESNKIYVVDLSNERAMSLTIE
Sbjct: 301 QPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNESNKIYVVDLSNERAMSLTIE 360
Query: 361 PRPVKQSRKFVPGCFVCLESRTCSSNLTLTSGSKHKISFLCDDLTRLWMNVEKTISCTDH 420
PRPVKQSRKFVPGCFVCLESRTCSSNLTLTSGSKHKISFLCDDLTRLWMNVEKTISCTDH
Sbjct: 361 PRPVKQSRKFVPGCFVCLESRTCSSNLTLTSGSKHKISFLCDDLTRLWMNVEKTISCTDH 420
Query: 421 RYCQRKSYSLQVPSDILHLPVELHDFSWKLLVPKDRLSLVLVPAQKLQQHTHEKPCNTSF 480
RYCQRKSYSLQVPSDILHLPVELHDFSWKLLVPKDRLSLVLVPAQKLQQHTHEKPCNTSF
Sbjct: 421 RYCQRKSYSLQVPSDILHLPVELHDFSWKLLVPKDRLSLVLVPAQKLQQHTHEKPCNTSF 480
Query: 481 SYLVASAIPSQDLYFGSFCPGGSIKQIQVKQNISVTLRTFAPSFQQEASRQGLTVSFIPY 540
SYLVASAIPSQDLYFGSFCPGGSIKQIQVKQNISVTLRTFAPSFQQEASRQGLTVSFIPY
Sbjct: 481 SYLVASAIPSQDLYFGSFCPGGSIKQIQVKQNISVTLRTFAPSFQQEASRQGLTVSFIPY 540
Query: 541 FKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTFFKERSGVVCQ 600
FKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTFFKERSGVVCQ
Sbjct: 541 FKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTFFKERSGVVCQ 600
Query: 601 TGRAFMIIQEQRTRAEEIFSLDEDVLPKPSFHHHSFWVNISNCSPTSGKQLDLLFSVTLT 660
TGRAFMIIQEQRTRAEEIFSLDEDVLPKPSFHHHSFWVNISNCSPTSGKQLDLLFSVTLT
Sbjct: 601 TGRAFMIIQEQRTRAEEIFSLDEDVLPKPSFHHHSFWVNISNCSPTSGKQLDLLFSVTLT 660
Query: 661 PRTVDLTVILIAAVGGGVLLLSALGLIICCVKKKKKKTNKGPAVGIYNDNINTEMPRQPK 720
PRTVDLTVILIAAVGGGVLLLSALGLIICCVKKKKKKTNKGPAVGIYNDNINTEMPRQPK
Sbjct: 661 PRTVDLTVILIAAVGGGVLLLSALGLIICCVKKKKKKTNKGPAVGIYNDNINTEMPRQPK 720
Query: 721 KFQKGRKDNDSHVYAVIEDTMVYGHLLQDSSGSFLQPEVDTYRPFQGTMGVCPPSPPTIC 780
KFQKGRKDNDSHVYAVIEDTMVYGHLLQDSSGSFLQPEVDTYRPFQGTMGVCPPSPPTIC
Sbjct: 721 KFQKGRKDNDSHVYAVIEDTMVYGHLLQDSSGSFLQPEVDTYRPFQGTMGVCPPSPPTIC 780
Query: 781 SRAPTAKLATEEPPPRSPPESESEPYTFSHPNNGDVSSKDTDIPLLNTQEPMEPAE 836
SRAPTAKLATEEPPPRSPPESESEPYTFSHPNNGDVSSKDTDIPLLNTQEPMEPAE
Sbjct: 781 SRAPTAKLATEEPPPRSPPESESEPYTFSHPNNGDVSSKDTDIPLLNTQEPMEPAE 836
>gi|30410803 CUB domain-containing protein 1 isoform 2 [Homo
sapiens]
Length = 343
Score = 689 bits (1779), Expect = 0.0
Identities = 341/343 (99%), Positives = 343/343 (100%)
Query: 1 MAGLNCGVSIALLGVLLLGAARLPRGAEAFEIALPRESNITVLIKLGTPTLLAKPCYIVI 60
MAGLNCGVSIALLGVLLLGAARLPRGAEAFEIALPRESNITVLIKLGTPTLLAKPCYIVI
Sbjct: 1 MAGLNCGVSIALLGVLLLGAARLPRGAEAFEIALPRESNITVLIKLGTPTLLAKPCYIVI 60
Query: 61 SKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSGPCPFGEVQLQPSTSLLPT 120
SKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSGPCPFGEVQLQPSTSLLPT
Sbjct: 61 SKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSGPCPFGEVQLQPSTSLLPT 120
Query: 121 LNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVTHSISGRIDATVVRIGTFCSN 180
LNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVTHSISGRIDATVVRIGTFCSN
Sbjct: 121 LNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVTHSISGRIDATVVRIGTFCSN 180
Query: 181 GTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIKRLCIIESVFEGEGSATLMSANY 240
GTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIKRLCIIESVFEGEGSATLMSANY
Sbjct: 181 GTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIKRLCIIESVFEGEGSATLMSANY 240
Query: 241 PEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIPGSTTNPEVFKLEDK 300
PEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIPGSTTNPEVFKLEDK
Sbjct: 241 PEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIPGSTTNPEVFKLEDK 300
Query: 301 QPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNESNK 343
QPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNES++
Sbjct: 301 QPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNESSE 343
Score = 44.3 bits (103), Expect = 5e-04
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 8/218 (3%)
Query: 374 CFVCLESRTCSSNLTLTSGSKHKISFLCDDLTRLWM-NVEKTISCTDHRYCQRKSYSLQV 432
C++ + R + L++ SG + +F C ++ ++K I C C LQ
Sbjct: 56 CYIVISKRHITM-LSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSGP-CPFGEVQLQ- 112
Query: 433 PSDILHLPVELHDFSWKLLVPKDRLSLVLVPAQKLQQHTHEKPCNTSFSYLVASAIPSQD 492
PS L LP F W + K + +L+Q + C ++ ++ I +
Sbjct: 113 PSTSL-LPTLNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVTHSISGRIDATV 171
Query: 493 LYFGSFCPGGSIKQIQVKQNISVTLRTFAPSFQQEASRQGLTVSFIPYFKEEGVFTVTPD 552
+ G+FC G++ +I++++ + + L P F + G +++ K + +
Sbjct: 172 VRIGTFCSNGTVSRIKMQEGVKMALHL--PWFHPR-NVSGFSIANRSSIKRLCIIESVFE 228
Query: 553 TKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTF 590
+ L + N+ G P ++W VP A ++F
Sbjct: 229 GEGSATLMSANYPEGFPEDELMTWQFVVPAHLRASVSF 266
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 40.4 bits (93), Expect = 0.007
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 666 LTVILIAAVGGGVLLLSALGLIICCVKKKKKKTNKGP-AVGIYNDNINTEMPRQPKKFQK 724
L ++IAA GGG+LL+ + LI+ C +K K +K G + + E P+ P+ +
Sbjct: 1248 LITVVIAAAGGGLLLILGIALIVTCCRKNKNDISKLIFKSGDFQMSPYAEYPKNPRSQEW 1307
Query: 725 GRKDNDSH 732
GR+ + H
Sbjct: 1308 GREAIEMH 1315
>gi|73623026 mannan-binding lectin serine protease 1 isoform 3 [Homo
sapiens]
Length = 380
Score = 39.7 bits (91), Expect = 0.012
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 235 LMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSN---CERKEERVE 282
+ S YP+ +P D +TW VP R + F++FNL + CE +VE
Sbjct: 31 IQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVE 81
>gi|21264359 mannan-binding lectin serine protease 1 isoform 2
precursor [Homo sapiens]
Length = 728
Score = 39.7 bits (91), Expect = 0.012
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 235 LMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSN---CERKEERVE 282
+ S YP+ +P D +TW VP R + F++FNL + CE +VE
Sbjct: 31 IQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVE 81
>gi|21264357 mannan-binding lectin serine protease 1 isoform 1
precursor [Homo sapiens]
Length = 699
Score = 39.7 bits (91), Expect = 0.012
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 235 LMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSN---CERKEERVE 282
+ S YP+ +P D +TW VP R + F++FNL + CE +VE
Sbjct: 31 IQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVE 81
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 36.2 bits (82), Expect = 0.13
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 23/127 (18%)
Query: 710 NINTEMPRQPKKFQKGRKDNDSHVYAVIEDTMVYGHLLQDSSGSFLQPEVDTYRPFQGTM 769
++NTE+ + K + D +S + +++D G +DS L+ E+ T + + +
Sbjct: 467 HLNTEV-KNSSDTGKVKLDENSEKH-LVKDLKAQG--TRDSKPIALKEEIVTPKETETSE 522
Query: 770 GVCPPSPPTICSRAPTAKLATEEPPPRSPPESESEPYTFSHPNNGDVSSKDTDIPLLNTQ 829
PP PTI S P L T PPP++PP P IP L Q
Sbjct: 523 KETPPPLPTIAS--PPPPLPTTTPPPQTPPLPPLPP-----------------IPALPQQ 563
Query: 830 EPMEPAE 836
P+ P++
Sbjct: 564 PPLPPSQ 570
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 36.2 bits (82), Expect = 0.13
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 23/127 (18%)
Query: 710 NINTEMPRQPKKFQKGRKDNDSHVYAVIEDTMVYGHLLQDSSGSFLQPEVDTYRPFQGTM 769
++NTE+ + K + D +S + +++D G +DS L+ E+ T + + +
Sbjct: 467 HLNTEV-KNSSDTGKVKLDENSEKH-LVKDLKAQG--TRDSKPIALKEEIVTPKETETSE 522
Query: 770 GVCPPSPPTICSRAPTAKLATEEPPPRSPPESESEPYTFSHPNNGDVSSKDTDIPLLNTQ 829
PP PTI S P L T PPP++PP P IP L Q
Sbjct: 523 KETPPPLPTIAS--PPPPLPTTTPPPQTPPLPPLPP-----------------IPALPQQ 563
Query: 830 EPMEPAE 836
P+ P++
Sbjct: 564 PPLPPSQ 570
>gi|157653329 procollagen C-endopeptidase enhancer [Homo sapiens]
Length = 449
Score = 35.0 bits (79), Expect = 0.29
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 554 KSKVYLRTPNW-DRGLPSLTSVSWNISVPRDQVACLTFFK 592
K++ L TPNW + P S SW+I P DQV LTF K
Sbjct: 165 KAQGTLTTPNWPESDYPPGISCSWHIIAPPDQVIALTFEK 204
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 34.3 bits (77), Expect = 0.49
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 773 PPSPPTICSRAPTAKLATEEPPPRSPPESESEP 805
PP+P +C R P A A PP +PP + + P
Sbjct: 191 PPAPAALCPRDPRAPAACSAPPGAAPPAAAASP 223
>gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2)
interacting protein [Homo sapiens]
Length = 1211
Score = 33.1 bits (74), Expect = 1.1
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 22/76 (28%)
Query: 750 SSGSFLQPEVDTYR---PFQGTMGVCPPSPPTICSRAPTAKLATEEPPPRSPPESESEPY 806
SS S +D+ R P G +CP SPP+ P P PP S + +
Sbjct: 624 SSESHPYASLDSSRAPSPQPGPGPICPDSPPS--------------PDPTRPP-SRRKLF 668
Query: 807 TFSHPNNGDVSSKDTD 822
TFSHP V S+DTD
Sbjct: 669 TFSHP----VRSRDTD 680
>gi|54792129 discoidin, CUB and LCCL domain containing 2 [Homo
sapiens]
Length = 775
Score = 33.1 bits (74), Expect = 1.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 229 GEGSATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCE 275
G S TL S NYP+ +P + W+ V R + F +F++ + +
Sbjct: 78 GPESGTLTSINYPQTYPNSTVCEWEIRVKMGERVRIKFGDFDIEDSD 124
>gi|6912724 tolloid-like 2 [Homo sapiens]
Length = 1015
Score = 32.7 bits (73), Expect = 1.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 232 SATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNL 271
+ T+ S +P+ +P ++ WQ V PA R S+ F F L
Sbjct: 628 NGTITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFEL 667
>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
Length = 985
Score = 32.7 bits (73), Expect = 1.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 766 QGTMGVCP--PSPPTICSRAPTAKLATEEPPPRSPPESESEPYTFSHP 811
Q +G CP P PPT + +PT++ A PPP PP +P + + P
Sbjct: 251 QPPLGNCPARPLPPTSDATSPTSRWAPRRPPP-PPPVLPLQPCSPAQP 297
>gi|24308436 methionine-tRNA synthetase 2 precursor [Homo sapiens]
Length = 593
Score = 32.7 bits (73), Expect = 1.4
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 103 PCPFGEVQLQPSTSLL-PTLNRTFIWDVKAHKS 134
PCPF +L P T LL P L+++ W VKAH++
Sbjct: 561 PCPFEGRRLGPETGLLFPRLDQSRTWLVKAHRT 593
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 32.3 bits (72), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 773 PPSPPTICSRAPTAKLATEEPPPRSPPESESEPYTFSHPNNGDVSSKDTDIPLLNTQEPM 832
PP P +++P LATEE PP+ PE + E +S + L Q P
Sbjct: 473 PPLPHEERAQSPPRSLATEEEPPQG-PEGQPEWKEAEELGEDSAASLSLQLSLQREQAPS 531
Query: 833 EPA 835
PA
Sbjct: 532 PPA 534
>gi|4507399 transcription factor 4 isoform b [Homo sapiens]
Length = 667
Score = 32.0 bits (71), Expect = 2.4
Identities = 39/147 (26%), Positives = 53/147 (36%), Gaps = 29/147 (19%)
Query: 229 GEGSATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIPGS 288
G G S NY +G P D + + + +H S F+N S + K ER Y G
Sbjct: 60 GNGGHPSPSRNYGDGTPYDHMTSRD--LGSHDNLSPPFVN---SRIQSKTERGSYSSYG- 113
Query: 289 TTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNESNKIYVVD 348
+ N+ G SL G D D +PG L P ++ Y
Sbjct: 114 ------------RESNLQGCHQQSLLGGDMDMGNPGTL---------SPTKPGSQYYQYS 152
Query: 349 LSNERAMSLTIEPRPV--KQSRKFVPG 373
+N R L V K+ RK PG
Sbjct: 153 SNNPRRRPLHSSAMEVQTKKVRKVPPG 179
>gi|145312267 transcription factor 4 isoform a [Homo sapiens]
Length = 671
Score = 32.0 bits (71), Expect = 2.4
Identities = 39/147 (26%), Positives = 53/147 (36%), Gaps = 29/147 (19%)
Query: 229 GEGSATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIPGS 288
G G S NY +G P D + + + +H S F+N S + K ER Y G
Sbjct: 60 GNGGHPSPSRNYGDGTPYDHMTSRD--LGSHDNLSPPFVN---SRIQSKTERGSYSSYG- 113
Query: 289 TTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNESNKIYVVD 348
+ N+ G SL G D D +PG L P ++ Y
Sbjct: 114 ------------RESNLQGCHQQSLLGGDMDMGNPGTL---------SPTKPGSQYYQYS 152
Query: 349 LSNERAMSLTIEPRPV--KQSRKFVPG 373
+N R L V K+ RK PG
Sbjct: 153 SNNPRRRPLHSSAMEVQTKKVRKVPPG 179
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 32.0 bits (71), Expect = 2.4
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 749 DSSGSFLQPEVDTYRPF-QGTMGVCPPSPPTICSRAPTAKLATEEPPPRSPPESESEPY 806
DS P+ + P QG PP PP S AP+ + PPP PP P+
Sbjct: 75 DSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPF 133
>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 492
Score = 32.0 bits (71), Expect = 2.4
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 744 GHLLQDSSGSFLQPEVDTYRPFQGT-MGVCPPSPPTICSRAPTAKLATEEPPPRSPPESE 802
G LQ LQP+ Y F+ + +P C R P + + +PP R+P S
Sbjct: 336 GPRLQGGGSLTLQPDYAKYATFKAAALKAAEAAPRDFCQRFPALEPSPRQPPARAPRPSP 395
Query: 803 SEP 805
P
Sbjct: 396 DLP 398
>gi|22547221 tolloid-like 1 [Homo sapiens]
Length = 1013
Score = 32.0 bits (71), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 232 SATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCE 275
+ T+ + +P+ +P ++ WQ V P R SV F F L E
Sbjct: 626 NGTITTPGWPKEYPPNKNCVWQVVAPTQYRISVKFEFFELEGNE 669
>gi|92110053 CUB and Sushi multiple domains 2 [Homo sapiens]
Length = 3487
Score = 32.0 bits (71), Expect = 2.4
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 220 LCIIE---SVFEGEGSATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFN 270
LCI + +V E EG ++S +P +P + +W+ +P A + FLNF+
Sbjct: 1963 LCIAQCGGTVEEMEG--VILSPGFPGNYPSNMDCSWKIALPVGFGAHIQFLNFS 2014
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 32.0 bits (71), Expect = 2.4
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 772 CPPSPPTICSRAPTA--KLATEEPPPRSPPESESEP 805
C PP+ S P+ ++A++ PPP +PP ES+P
Sbjct: 847 CAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQP 882
>gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I
subunit isoform b [Homo sapiens]
Length = 2188
Score = 32.0 bits (71), Expect = 2.4
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 775 SPPTICSRAPTAK--LATEEPPPRSPPES 801
SPP+ + AP A+ + TE+P PRSPP S
Sbjct: 6 SPPSSSAAAPAAEPGVTTEQPGPRSPPSS 34
>gi|21361077 calcium channel, voltage-dependent, T type, alpha 1I
subunit isoform a [Homo sapiens]
Length = 2223
Score = 32.0 bits (71), Expect = 2.4
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 775 SPPTICSRAPTAK--LATEEPPPRSPPES 801
SPP+ + AP A+ + TE+P PRSPP S
Sbjct: 6 SPPSSSAAAPAAEPGVTTEQPGPRSPPSS 34
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 31.6 bits (70), Expect = 3.2
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
Query: 761 TYRPFQGTMGVCPPSPPTICSRAPTAKLATEEPPPRS----PPESESEPYTFS 809
T P G+ G PPT S AP A+L T PPP S S S P T S
Sbjct: 1647 TPTPTTGSTG-----PPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTES 1694
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 764 PFQGTMGVCPPSPPTICSRA------PTAKLATEEPPPRSPPESESEPYTFSHPNNGDVS 817
P T G P PP + P T+ P++P + PY PNN S
Sbjct: 1172 PLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPS 1231
Query: 818 SKDTDIPL 825
++ ++I L
Sbjct: 1232 TEPSEISL 1239
>gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo
sapiens]
Length = 564
Score = 31.6 bits (70), Expect = 3.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 772 CPPSPPTICSRAPTAKLATEEPPPRSPPESESEP 805
CPP PP+ + + +T PPP++PP + + P
Sbjct: 521 CPPPPPSAPTPPIPSPPSTLPPPPQAPPPNRAPP 554
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 31.6 bits (70), Expect = 3.2
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 763 RPFQGTMGVCPPSP--PTICSRAPTAKLATEEPPPRSPPESESEP----YTFSHP 811
RP++ P +P PT+ + AP A A+ PPP PP E P TF+HP
Sbjct: 425 RPYKTYSQGAPEAPLSPTLNTPAPVAMPAS--PPPGPPPAPEPGPPPSVITFAHP 477
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 31.6 bits (70), Expect = 3.2
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 763 RPFQGTMGVCPPSP--PTICSRAPTAKLATEEPPPRSPPESESEP----YTFSHP 811
RP++ P +P PT+ + AP A A+ PPP PP E P TF+HP
Sbjct: 425 RPYKTYSQGAPEAPLSPTLNTPAPVAMPAS--PPPGPPPAPEPGPPPSVITFAHP 477
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,900,619
Number of Sequences: 37866
Number of extensions: 1711197
Number of successful extensions: 6726
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 6485
Number of HSP's gapped (non-prelim): 264
length of query: 836
length of database: 18,247,518
effective HSP length: 111
effective length of query: 725
effective length of database: 14,044,392
effective search space: 10182184200
effective search space used: 10182184200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.