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Search of human proteins with 30410792
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30410792 proteasome activator subunit 2 [Homo sapiens]
(239 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30410792 proteasome activator subunit 2 [Homo sapiens] 477 e-135
gi|5453990 proteasome activator subunit 1 isoform 1 [Homo sapiens] 224 5e-59
gi|30581141 proteasome activator subunit 1 isoform 2 [Homo sapiens] 200 1e-51
gi|30410794 proteasome activator subunit 3 isoform 1 [Homo sapiens] 163 1e-40
gi|30410796 proteasome activator subunit 3 isoform 2 [Homo sapiens] 155 3e-38
gi|46370069 exostosin 2 isoform 2 [Homo sapiens] 32 0.49
gi|184172392 exostosin 2 isoform 1 [Homo sapiens] 32 0.49
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 32 0.64
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 32 0.64
gi|239047795 pleckstrin homology domain containing, family A mem... 31 1.1
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 30 2.4
gi|145699133 KPL2 protein isoform 1 [Homo sapiens] 29 3.2
gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens] 29 3.2
gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens] 29 3.2
gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens] 29 3.2
gi|153792294 myopalladin [Homo sapiens] 29 3.2
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 29 3.2
gi|118498337 HECT domain containing 1 [Homo sapiens] 29 3.2
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 29 4.1
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 28 5.4
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 28 5.4
gi|156151443 alpha-kinase 1 [Homo sapiens] 28 5.4
gi|156151441 alpha-kinase 1 [Homo sapiens] 28 5.4
gi|55741447 pleckstrin homology domain containing, family H (wit... 28 5.4
gi|146219841 PNMA-like 2 [Homo sapiens] 28 5.4
gi|4502079 adenosine monophosphate deaminase 3 isoform 1A [Homo ... 28 7.0
gi|57242807 zinc finger protein 518 [Homo sapiens] 28 7.0
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 28 7.0
gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens] 28 9.2
gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens] 28 9.2
>gi|30410792 proteasome activator subunit 2 [Homo sapiens]
Length = 239
Score = 477 bits (1228), Expect = e-135
Identities = 239/239 (100%), Positives = 239/239 (100%)
Query: 1 MAKPCGVRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSL 60
MAKPCGVRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSL
Sbjct: 1 MAKPCGVRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSL 60
Query: 61 RAPLDIPIPDPPPKDDEMETDKQEKKEVHKCGFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
RAPLDIPIPDPPPKDDEMETDKQEKKEVHKCGFLPGNEKVLSLLALVKPEVWTLKEKCIL
Sbjct: 61 RAPLDIPIPDPPPKDDEMETDKQEKKEVHKCGFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
Query: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK
Sbjct: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
Query: 181 ETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAELYHIISSNLEKIVNPKGEEKPSMY 239
ETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAELYHIISSNLEKIVNPKGEEKPSMY
Sbjct: 181 ETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAELYHIISSNLEKIVNPKGEEKPSMY 239
>gi|5453990 proteasome activator subunit 1 isoform 1 [Homo sapiens]
Length = 249
Score = 224 bits (571), Expect = 5e-59
Identities = 118/246 (47%), Positives = 166/246 (67%), Gaps = 13/246 (5%)
Query: 7 VRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDI 66
+R+ EA+ +V+VFR++L + E L + P+KI L+ L+E +LN A+L++L+APLDI
Sbjct: 4 LRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDI 63
Query: 67 PIPDPPPKDDEMETDKQEKKEVHK-------------CGFLPGNEKVLSLLALVKPEVWT 113
P+PDP + ++ E KQ++KE CG + NEK++ LL +KPE+
Sbjct: 64 PVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPEIKD 123
Query: 114 LKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGD 173
+ E+ LV TW+Q IP+IEDGN+FGVA+QEKV E + ++ TK+E F T ISKYFSERGD
Sbjct: 124 VIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGD 183
Query: 174 AVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAELYHIISSNLEKIVNPKGE 233
AV KA+K+ HV DYR LVHE DEA Y ++R MV+++R YA LY II N EK+ P+GE
Sbjct: 184 AVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFEKLKKPRGE 243
Query: 234 EKPSMY 239
K +Y
Sbjct: 244 TKGMIY 249
>gi|30581141 proteasome activator subunit 1 isoform 2 [Homo sapiens]
Length = 250
Score = 200 bits (508), Expect = 1e-51
Identities = 105/220 (47%), Positives = 150/220 (68%), Gaps = 13/220 (5%)
Query: 7 VRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDI 66
+R+ EA+ +V+VFR++L + E L + P+KI L+ L+E +LN A+L++L+APLDI
Sbjct: 4 LRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDI 63
Query: 67 PIPDPPPKDDEMETDKQEKKEVHK-------------CGFLPGNEKVLSLLALVKPEVWT 113
P+PDP + ++ E KQ++KE CG + NEK++ LL +KPE+
Sbjct: 64 PVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPEIKD 123
Query: 114 LKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGD 173
+ E+ LV TW+Q IP+IEDGN+FGVA+QEKV E + ++ TK+E F T ISKYFSERGD
Sbjct: 124 VIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGD 183
Query: 174 AVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLRAFY 213
AV KA+K+ HV DYR LVHE DEA Y ++R MV+++R Y
Sbjct: 184 AVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAY 223
>gi|30410794 proteasome activator subunit 3 isoform 1 [Homo sapiens]
Length = 254
Score = 163 bits (412), Expect = 1e-40
Identities = 84/250 (33%), Positives = 144/250 (57%), Gaps = 17/250 (6%)
Query: 7 VRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDI 66
+++ E + +V+ FR+ + EAE+ + F P+K++ L+ L+E LN+ DLT + + +++
Sbjct: 5 LKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNL 64
Query: 67 PIPDP---PPKDDEMETDKQEKKEVHKC--------------GFLPGNEKVLSLLALVKP 109
P+PDP D ++ +K+ + +C G L N++++ ++ VKP
Sbjct: 65 PVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKP 124
Query: 110 EVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFS 169
E+ L EKC V W+Q LIP+IEDGN+FGV+IQE+ + + V+++ ++ IS+Y+
Sbjct: 125 EIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYI 184
Query: 170 ERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAELYHIISSNLEKIVN 229
R V+K +K HV DYR V E DE Y LR ++ +LR Y L+ +I N+EKI
Sbjct: 185 TRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIEKIKR 244
Query: 230 PKGEEKPSMY 239
P+ ++Y
Sbjct: 245 PRSSNAETLY 254
>gi|30410796 proteasome activator subunit 3 isoform 2 [Homo sapiens]
Length = 267
Score = 155 bits (392), Expect = 3e-38
Identities = 84/263 (31%), Positives = 145/263 (55%), Gaps = 30/263 (11%)
Query: 7 VRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDI 66
+++ E + +V+ FR+ + EAE+ + F P+K++ L+ L+E LN+ DLT + + +++
Sbjct: 5 LKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNL 64
Query: 67 PIPDP---PPKDDEMETDKQEKKEVHKC--------------GFLPGNEKVLSLLALVKP 109
P+PDP D ++ +K+ + +C G L N++++ ++ VKP
Sbjct: 65 PVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKP 124
Query: 110 EVWTLKEKC-------------ILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTK 156
E+ L EKC + V W+Q LIP+IEDGN+FGV+IQE+ + + V+++
Sbjct: 125 EIRLLIEKCNTPSGKGPHICFDLQVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESE 184
Query: 157 VEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAEL 216
++ IS+Y+ R V+K +K HV DYR V E DE Y LR ++ +LR Y L
Sbjct: 185 AASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTL 244
Query: 217 YHIISSNLEKIVNPKGEEKPSMY 239
+ +I N+EKI P+ ++Y
Sbjct: 245 HDMILKNIEKIKRPRSSNAETLY 267
>gi|46370069 exostosin 2 isoform 2 [Homo sapiens]
Length = 718
Score = 32.0 bits (71), Expect = 0.49
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 32 LYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVHKC 91
+++F P I N E ++ D+ +R P D PIP+ M T +V++C
Sbjct: 42 MFQFWPHSIESSNDWNVEKR-SIRDVPVVRLPADSPIPERGDLSCRMHTCF----DVYRC 96
Query: 92 GFLPGNEKVLSLLALVK 108
GF P N+ + + AL K
Sbjct: 97 GFNPKNKIKVYIYALKK 113
>gi|184172392 exostosin 2 isoform 1 [Homo sapiens]
Length = 731
Score = 32.0 bits (71), Expect = 0.49
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 32 LYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVHKC 91
+++F P I N E ++ D+ +R P D PIP+ M T +V++C
Sbjct: 55 MFQFWPHSIESSNDWNVEKR-SIRDVPVVRLPADSPIPERGDLSCRMHTCF----DVYRC 109
Query: 92 GFLPGNEKVLSLLALVK 108
GF P N+ + + AL K
Sbjct: 110 GFNPKNKIKVYIYALKK 126
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 31.6 bits (70), Expect = 0.64
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 48 QEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVHKCGF-LPGNEKVLSLLAL 106
+ED +N LT + L+ + D + +E +K+ + ++ + L G+ K+ +
Sbjct: 1019 EEDKVNT--LTKAKIKLEQQVDD---LEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIM 1073
Query: 107 -VKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLE---RVNAVKTKVEAFQT 162
++ E L EK I +L KIED G+ +Q+K+ E R+ ++ ++EA +
Sbjct: 1074 DIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEAERA 1133
Query: 163 TISKYFSERGD 173
+ +K +R D
Sbjct: 1134 SRAKAEKQRSD 1144
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 31.6 bits (70), Expect = 0.64
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 48 QEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVHKCGF-LPGNEKVLSLLAL 106
+ED +N LT + L+ + D + +E +K+ + ++ + L G+ K+ +
Sbjct: 1019 EEDKVNT--LTKAKIKLEQQVDD---LEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIM 1073
Query: 107 -VKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLE---RVNAVKTKVEAFQT 162
++ E L EK I +L KIED G+ +Q+K+ E R+ ++ ++EA +
Sbjct: 1074 DIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEAERA 1133
Query: 163 TISKYFSERGD 173
+ +K +R D
Sbjct: 1134 SRAKAEKQRSD 1144
>gi|239047795 pleckstrin homology domain containing, family A member
7 [Homo sapiens]
Length = 1121
Score = 30.8 bits (68), Expect = 1.1
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 7 VRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQ---KIIYLNQLLQEDSLNV-ADLTSLRA 62
+R E + Q+E + L ++ E+ YR PQ KI Y +LLQED +++ A+L+
Sbjct: 712 IRALKENKDQLESVLEVLHRQMEQ--YRDQPQHLEKIAYQQKLLQEDLVHIRAELSREST 769
Query: 63 PLDIPIPDPPPKDDEMETDKQEKKEVHKCGF 93
++ + ++++E KQ +E H+ F
Sbjct: 770 EMENAWNEYLKLENDVEQLKQTLQEQHRRAF 800
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 29.6 bits (65), Expect = 2.4
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 48 QEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVHKCGF-LPGNEKVLSLLAL 106
+ED +N+ LT + L+ + D + +E +K+ + ++ + L G+ K+ +
Sbjct: 1016 EEDKVNI--LTKAKTKLEQQVDD---LEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTM 1070
Query: 107 -VKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLE---RVNAVKTKVEAFQT 162
++ + L EK I +LI KIED + +Q+K+ E R+ + ++EA +
Sbjct: 1071 DMENDKQQLDEKLEKKEFEISNLISKIEDEQAVEIQLQKKIKELQARIEELGEEIEAERA 1130
Query: 163 TISKYFSERGD 173
+ +K +R D
Sbjct: 1131 SRAKAEKQRSD 1141
>gi|145699133 KPL2 protein isoform 1 [Homo sapiens]
Length = 1822
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 18 EVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSL-RAPLDIPIPDPPPKDD 76
E+ +++L ++ +E L + +K + + L+E SL PL P P PPP
Sbjct: 864 EIDKESLCEKVKEILTTEIAKKKNKVEKKLEEKEAEKKAAASLAELPLPTPPPAPPP--- 920
Query: 77 EMETDKQEKKEVHK 90
+ +++KE+H+
Sbjct: 921 ----EPEKEKEIHQ 930
>gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens]
Length = 689
Score = 29.3 bits (64), Expect = 3.2
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 46 LLQEDSLNVADLTSLRAPLDIPIPDPP--------PKDDEMETDKQEKKEVHKCGFLPGN 97
+L E +A+ +SL PL +P P PP P+ E T Q+ E+ P +
Sbjct: 119 ILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSP-S 177
Query: 98 EKVLSLLALVK 108
+ VL L AL++
Sbjct: 178 DPVLPLPALIQ 188
>gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens]
Length = 549
Score = 29.3 bits (64), Expect = 3.2
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 46 LLQEDSLNVADLTSLRAPLDIPIPDPP--------PKDDEMETDKQEKKEVHKCGFLPGN 97
+L E +A+ +SL PL +P P PP P+ E T Q+ E+ P +
Sbjct: 119 ILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSP-S 177
Query: 98 EKVLSLLALVK 108
+ VL L AL++
Sbjct: 178 DPVLPLPALIQ 188
>gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens]
Length = 713
Score = 29.3 bits (64), Expect = 3.2
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 46 LLQEDSLNVADLTSLRAPLDIPIPDPP--------PKDDEMETDKQEKKEVHKCGFLPGN 97
+L E +A+ +SL PL +P P PP P+ E T Q+ E+ P +
Sbjct: 119 ILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSP-S 177
Query: 98 EKVLSLLALVK 108
+ VL L AL++
Sbjct: 178 DPVLPLPALIQ 188
>gi|153792294 myopalladin [Homo sapiens]
Length = 1320
Score = 29.3 bits (64), Expect = 3.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 44 NQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVHK 90
N+++QE+S + +DL+ R +PIP P D E++E +
Sbjct: 189 NKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVNHALEQQEAKR 235
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 29.3 bits (64), Expect = 3.2
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 10 SGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIP 69
+G+ K+ +L ++ E R L +I +LLQ S +L +L+ IP
Sbjct: 969 AGQISKEELQHEFDLLKKENEQRKRKLQAALINRKELLQRVSRLEEELANLKDESKKEIP 1028
Query: 70 DPPPKDDEMETDKQEKKEVHKC 91
+ E+E DK+ K+ KC
Sbjct: 1029 LSETERGEVEEDKENKEYSEKC 1050
>gi|118498337 HECT domain containing 1 [Homo sapiens]
Length = 2610
Score = 29.3 bits (64), Expect = 3.2
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 14/62 (22%)
Query: 26 QEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEK 85
QEAE LY FL DS + L + D +P+P +DDE E D QE
Sbjct: 1653 QEAEYSLYDFL-------------DSCRASTLLA-ELDDDEDLPEPDEEDDENEDDNQED 1698
Query: 86 KE 87
+E
Sbjct: 1699 QE 1700
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 28.9 bits (63), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 53 NVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVHK 90
+V + TS L +P P+P P+ E +K KKE K
Sbjct: 234 SVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEK 271
Score = 28.1 bits (61), Expect = 7.0
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 36 LPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKE 87
LP+ + + + +++ + +D+ L+ P PIP+P E + K+++KE
Sbjct: 223 LPEPSVKVKEPSVQEATSTSDI--LKVPKPEPIPEPKEPSPEKNSKKEKEKE 272
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 28.5 bits (62), Expect = 5.4
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 22 QNLFQEAEEFLYRFLPQKIIYLNQL--LQEDSLNVADLTSLRAPLD 65
Q QE+++ L R +P+K I +QL +Q++SL+ L +L+ L+
Sbjct: 528 QQQLQESQQMLGRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALE 573
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 28.5 bits (62), Expect = 5.4
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 22 QNLFQEAEEFLYRFLPQKIIYLNQL--LQEDSLNVADLTSLRAPLD 65
Q QE+++ L R +P+K I +QL +Q++SL+ L +L+ L+
Sbjct: 528 QQQLQESQQMLGRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALE 573
>gi|156151443 alpha-kinase 1 [Homo sapiens]
Length = 1244
Score = 28.5 bits (62), Expect = 5.4
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 22 QNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVAD---------LTSLRAPL 64
+ L QEA+E + F+P+K Y + ED N+ D L SLRA +
Sbjct: 48 RTLIQEAKEMKWPFVPEKWQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASI 99
>gi|156151441 alpha-kinase 1 [Homo sapiens]
Length = 1244
Score = 28.5 bits (62), Expect = 5.4
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 22 QNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVAD---------LTSLRAPL 64
+ L QEA+E + F+P+K Y + ED N+ D L SLRA +
Sbjct: 48 RTLIQEAKEMKWPFVPEKWQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASI 99
>gi|55741447 pleckstrin homology domain containing, family H (with
MyTH4 domain) member 1 [Homo sapiens]
Length = 1364
Score = 28.5 bits (62), Expect = 5.4
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 110 EVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISK 166
E T++EK + W+ + K+E N + ++++E+V +++ +EA Q S+
Sbjct: 120 EAKTVQEKAAKIKEWVTLKLAKLEMENQHLKSHNQRLVEQVGSLQDALEAIQIAPSR 176
>gi|146219841 PNMA-like 2 [Homo sapiens]
Length = 635
Score = 28.5 bits (62), Expect = 5.4
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 48 QEDSLNVADLTSLRAPLDIPIPDPPPKD----DEMETDKQEKKEVHKCGFLPGNEKVLSL 103
+ED V DL +L A D P +P D D E+ QE +E+ N + +++
Sbjct: 283 KEDKNGVPDLVALLAVRDTPDEEPVDSDTSESDSQESGDQETEEL-------DNPEFVAI 335
Query: 104 LALVKPEVWTLKEKCILVITWIQHL 128
+A P +E+ + + + I+ L
Sbjct: 336 VAYTDPSDPWAREEMLKIASVIESL 360
>gi|4502079 adenosine monophosphate deaminase 3 isoform 1A [Homo
sapiens]
Length = 776
Score = 28.1 bits (61), Expect = 7.0
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 9 LSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPI 68
LS E + F + E +E + R L +K+ + L +EDS + L ++ P D PI
Sbjct: 3 LSSEPAEMPRQFPKLNISEVDEQV-RLLAEKV-FAKVLREEDSKDALSLFTV--PEDCPI 58
Query: 69 PDPPPKDDEMETDKQEKKEV 88
K+ E++ + E+K V
Sbjct: 59 GQKEAKERELQKELAEQKSV 78
>gi|57242807 zinc finger protein 518 [Homo sapiens]
Length = 1483
Score = 28.1 bits (61), Expect = 7.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 131 KIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGD 173
KI G+D + +VL+++N +TK E + ++ SE D
Sbjct: 332 KINSGSDRSIEKNTQVLKKMNKTQTKSEDQSHVVQEHLSEEKD 374
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 28.1 bits (61), Expect = 7.0
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 142 IQEKVLERVN--AVKTKVEAFQTTISKYFSERGDAVAK-------ASKETHVMDYRALVH 192
++ K LER N K ++ ++ +ER +A+ K +K+ + L
Sbjct: 796 LESKELERQNLETFKDRMTEESKVEAELHAERIEALRKQFQTERETTKKVAQREVAELKK 855
Query: 193 ERDEAAYG--ELRAMVLDLRAFYAELYHIISSNLEKIVNPKGEEK 235
DEA + E+ +LR AEL I+ SN EKI N K + K
Sbjct: 856 ALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIK 900
>gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens]
Length = 849
Score = 27.7 bits (60), Expect = 9.2
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 31/165 (18%)
Query: 57 LTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVHKCGFLPG-NEKVLSLLAL-VKPEVWTL 114
L +R P P+P PPP GFL G N L +L +KP+
Sbjct: 336 LPGMRMPFSGPVPPPPP-----------------LGFLGGQNSPPLPILPFGLKPKKEFK 378
Query: 115 KEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGD- 173
E + + W++ + P N F + + E E V+ + K+E K E D
Sbjct: 379 PEISMRRLNWLK-IRPHEMTENCFWIKVNENKYENVDLL-CKLENTFCCQQKERREEEDI 436
Query: 174 ----AVAKASKETHVMDYR-----ALVHERDEAAYGELRAMVLDL 209
++ K KE +D + ++ Y E+R M+L++
Sbjct: 437 EEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEV 481
>gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]
Length = 1193
Score = 27.7 bits (60), Expect = 9.2
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 31/165 (18%)
Query: 57 LTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVHKCGFLPG-NEKVLSLLAL-VKPEVWTL 114
L +R P P+P PPP GFL G N L +L +KP+
Sbjct: 599 LPGMRMPFSGPVPPPPP-----------------LGFLGGQNSPPLPILPFGLKPKKEFK 641
Query: 115 KEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGD- 173
E + + W++ + P N F + + E E V+ + K+E K E D
Sbjct: 642 PEISMRRLNWLK-IRPHEMTENCFWIKVNENKYENVDLL-CKLENTFCCQQKERREEEDI 699
Query: 174 ----AVAKASKETHVMDYR-----ALVHERDEAAYGELRAMVLDL 209
++ K KE +D + ++ Y E+R M+L++
Sbjct: 700 EEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEV 744
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,269,878
Number of Sequences: 37866
Number of extensions: 415247
Number of successful extensions: 1580
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1552
Number of HSP's gapped (non-prelim): 42
length of query: 239
length of database: 18,247,518
effective HSP length: 99
effective length of query: 140
effective length of database: 14,498,784
effective search space: 2029829760
effective search space used: 2029829760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.