PSME3 25220

Name: PSME3	Sequence: fasta or formatted (254aa)		NCBI GI: 30410794
Description: proteasome activator subunit 3 isoform 1		Referenced in: Proteasome
Other entries for this name: alt prot [267aa] proteasome activator subunit 3 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 10 2 C cysteine 0.8 2 1 D aspartate 6.3 16 1 E glutamate 9.8 25 2 F phenylalanine 2.8 7 2 G glycine 2.4 6 1 H histidine 2.0 5 1 I isoleucine 8.7 22 2 K lysine 8.3 21 2 L leucine 11.8 30 2 M methionine 2.4 6 1 N asparagine 4.7 12 2 P proline 4.3 11 1 Q glutamine 3.5 9 2 R arginine 5.9 15 2 S serine 6.3 16 2 T threonine 5.1 13 1 V valine 7.1 18 1 W tryptophan 0.4 1 1 Y tyrosine 3.5 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome activator subunit 3 isoform 1 PSME3 0.979 proteasome activator subunit 3 isoform 2 PSME1 0.378 proteasome activator subunit 1 isoform 1 PSME1 0.327 proteasome activator subunit 1 isoform 2 PSME2 0.291 proteasome activator subunit 2 NEFL 0.021 neurofilament, light polypeptide 68kDa CGNL1 0.011 cingulin-like 1 PPP2R4 0.011 protein phosphatase 2A, regulatory subunit B' isofor... MYH15 0.008 myosin, heavy polypeptide 15 DOCK10 0.008 dedicator of cytokinesis 10 FAM160A1 0.008 hypothetical protein LOC729830 SPINK5 0.006 serine peptidase inhibitor, Kazal type 5 isoform c ... SPINK5 0.006 serine peptidase inhibitor, Kazal type 5 isoform b p... SPINK5 0.006 serine peptidase inhibitor, Kazal type 5 isoform a ... IFT88 0.006 intraflagellar transport 88 homolog isoform 1 IFT88 0.006 intraflagellar transport 88 homolog isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.