Guide to the Human Genome
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Search of human proteins with 29789379

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|29789379 sphingomyelin synthase 1 [Homo sapiens]
         (413 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|29789379 sphingomyelin synthase 1 [Homo sapiens]                   886   0.0  
gi|210147409 sphingomyelin synthase 2 [Homo sapiens]                  461   e-130
gi|210147407 sphingomyelin synthase 2 [Homo sapiens]                  461   e-130
gi|22749271 sphingomyelin synthase 2 [Homo sapiens]                   461   e-130
gi|21389545 sterile alpha motif domain containing 8 [Homo sapiens]    180   2e-45
gi|74316006 CNKSR family member 3 [Homo sapiens]                       35   0.12 
gi|29294627 PTPRF interacting protein binding protein 1 isoform ...    33   0.47 
gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo...    33   0.47 
gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo...    33   0.47 
gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo...    33   0.47 
gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Ho...    33   0.62 
gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [H...    30   3.1  
gi|58082089 hypothetical protein LOC161394 [Homo sapiens]              30   4.0  
gi|21361278 transcription factor CP2 [Homo sapiens]                    30   5.2  
gi|7706091 bifunctional apoptosis regulator [Homo sapiens]             30   5.2  
gi|169211538 PREDICTED: hypothetical protein [Homo sapiens]            29   6.8  
gi|169211944 PREDICTED: hypothetical protein [Homo sapiens]            29   6.8  
gi|169210722 PREDICTED: hypothetical protein [Homo sapiens]            29   6.8  
gi|188595682 ankyrin 2 isoform 3 [Homo sapiens]                        29   6.8  
gi|52426737 ankyrin 2 isoform 2 [Homo sapiens]                         29   6.8  
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]                         29   6.8  
gi|57222565 protein phosphatase 2, catalytic subunit, beta isofo...    29   6.8  
gi|4758952 protein phosphatase 2, catalytic subunit, beta isofor...    29   6.8  
gi|11464975 elongation of very long chain fatty acids-like 5 [Ho...    29   6.8  
gi|94721259 solute carrier family 26, member 6 isoform 4 [Homo s...    29   8.9  
gi|94721257 solute carrier family 26, member 6 isoform 3 [Homo s...    29   8.9  
gi|94721255 solute carrier family 26, member 6 isoform 2 [Homo s...    29   8.9  
gi|94721253 solute carrier family 26, member 6 isoform 1 [Homo s...    29   8.9  

>gi|29789379 sphingomyelin synthase 1 [Homo sapiens]
          Length = 413

 Score =  886 bits (2289), Expect = 0.0
 Identities = 413/413 (100%), Positives = 413/413 (100%)

Query: 1   MKEVVYWSPKKVADWLLENAMPEYCEPLEHFTGQDLINLTQEDFKKPPLCRVSSDNGQRL 60
           MKEVVYWSPKKVADWLLENAMPEYCEPLEHFTGQDLINLTQEDFKKPPLCRVSSDNGQRL
Sbjct: 1   MKEVVYWSPKKVADWLLENAMPEYCEPLEHFTGQDLINLTQEDFKKPPLCRVSSDNGQRL 60

Query: 61  LDMIETLKMEHHLEAHKNGHANGHLNIGVDIPTPDGSFSIKIKPNGMPNGYRKEMIKIPM 120
           LDMIETLKMEHHLEAHKNGHANGHLNIGVDIPTPDGSFSIKIKPNGMPNGYRKEMIKIPM
Sbjct: 61  LDMIETLKMEHHLEAHKNGHANGHLNIGVDIPTPDGSFSIKIKPNGMPNGYRKEMIKIPM 120

Query: 121 PELERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRV 180
           PELERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRV
Sbjct: 121 PELERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRV 180

Query: 181 QWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGM 240
           QWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGM
Sbjct: 181 QWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGM 240

Query: 241 HFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFIKEYS 300
           HFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFIKEYS
Sbjct: 241 HFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFIKEYS 300

Query: 301 PRRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVLKEAS 360
           PRRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVLKEAS
Sbjct: 301 PRRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVLKEAS 360

Query: 361 QMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPVVHLSRQVKYSRLVNDT 413
           QMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPVVHLSRQVKYSRLVNDT
Sbjct: 361 QMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPVVHLSRQVKYSRLVNDT 413


>gi|210147409 sphingomyelin synthase 2 [Homo sapiens]
          Length = 365

 Score =  461 bits (1185), Expect = e-130
 Identities = 215/354 (60%), Positives = 272/354 (76%), Gaps = 5/354 (1%)

Query: 61  LDMIETLKMEHHLEAHKNGHANGHLNIG--VDIPTPDGSFSIKIKPNGMPNGYRK--EMI 116
           +D+IET K+E HLE   +   N +      V+    +G+   K   +G+  G +K  + I
Sbjct: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60

Query: 117 KIPMPELERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDH 176
           +I MP   R+++P+EW KT +AF+YA+   VLTTVMI+VVHERVPPKE+ PPLPD FFD+
Sbjct: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120

Query: 177 FNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLP 236
            +RV+WAFS+ EING+ILVGLW+ QWL L+YKSI+ RRF  I+GTLYLYRCITMYVTTLP
Sbjct: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180

Query: 237 VPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFI 296
           VPGMHF C+PKL GD +A+++RI++LI+GGGLSITGSH +CGD+L+SGHTV LTLTYLFI
Sbjct: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240

Query: 297 KEYSPRRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVL 356
           KEYSPR  WWYH ICWLLS  GI CIL+AH+HYT+DV++AYYITTRLFWWYH+MAN++ L
Sbjct: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300

Query: 357 KEASQMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPV-VHLSRQVKYSRL 409
           K +SQ N L+R WW+  F +FEKNVQG +P  + WP  WP     S   KYSR+
Sbjct: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRV 354


>gi|210147407 sphingomyelin synthase 2 [Homo sapiens]
          Length = 365

 Score =  461 bits (1185), Expect = e-130
 Identities = 215/354 (60%), Positives = 272/354 (76%), Gaps = 5/354 (1%)

Query: 61  LDMIETLKMEHHLEAHKNGHANGHLNIG--VDIPTPDGSFSIKIKPNGMPNGYRK--EMI 116
           +D+IET K+E HLE   +   N +      V+    +G+   K   +G+  G +K  + I
Sbjct: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60

Query: 117 KIPMPELERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDH 176
           +I MP   R+++P+EW KT +AF+YA+   VLTTVMI+VVHERVPPKE+ PPLPD FFD+
Sbjct: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120

Query: 177 FNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLP 236
            +RV+WAFS+ EING+ILVGLW+ QWL L+YKSI+ RRF  I+GTLYLYRCITMYVTTLP
Sbjct: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180

Query: 237 VPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFI 296
           VPGMHF C+PKL GD +A+++RI++LI+GGGLSITGSH +CGD+L+SGHTV LTLTYLFI
Sbjct: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240

Query: 297 KEYSPRRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVL 356
           KEYSPR  WWYH ICWLLS  GI CIL+AH+HYT+DV++AYYITTRLFWWYH+MAN++ L
Sbjct: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300

Query: 357 KEASQMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPV-VHLSRQVKYSRL 409
           K +SQ N L+R WW+  F +FEKNVQG +P  + WP  WP     S   KYSR+
Sbjct: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRV 354


>gi|22749271 sphingomyelin synthase 2 [Homo sapiens]
          Length = 365

 Score =  461 bits (1185), Expect = e-130
 Identities = 215/354 (60%), Positives = 272/354 (76%), Gaps = 5/354 (1%)

Query: 61  LDMIETLKMEHHLEAHKNGHANGHLNIG--VDIPTPDGSFSIKIKPNGMPNGYRK--EMI 116
           +D+IET K+E HLE   +   N +      V+    +G+   K   +G+  G +K  + I
Sbjct: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60

Query: 117 KIPMPELERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDH 176
           +I MP   R+++P+EW KT +AF+YA+   VLTTVMI+VVHERVPPKE+ PPLPD FFD+
Sbjct: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120

Query: 177 FNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLP 236
            +RV+WAFS+ EING+ILVGLW+ QWL L+YKSI+ RRF  I+GTLYLYRCITMYVTTLP
Sbjct: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180

Query: 237 VPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFI 296
           VPGMHF C+PKL GD +A+++RI++LI+GGGLSITGSH +CGD+L+SGHTV LTLTYLFI
Sbjct: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240

Query: 297 KEYSPRRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVL 356
           KEYSPR  WWYH ICWLLS  GI CIL+AH+HYT+DV++AYYITTRLFWWYH+MAN++ L
Sbjct: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300

Query: 357 KEASQMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPV-VHLSRQVKYSRL 409
           K +SQ N L+R WW+  F +FEKNVQG +P  + WP  WP     S   KYSR+
Sbjct: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRV 354


>gi|21389545 sterile alpha motif domain containing 8 [Homo sapiens]
          Length = 326

 Score =  180 bits (456), Expect = 2e-45
 Identities = 108/314 (34%), Positives = 166/314 (52%), Gaps = 33/314 (10%)

Query: 7   WSPKKVADWLLENAMPEYCEPL---EHFTGQDLINLTQEDFKKPPL-CRVSSDNGQRLLD 62
           W+ K VA WL +    EY + L       G  L+ LT+ D + PPL  +V  D  + +L 
Sbjct: 12  WTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRLMLS 71

Query: 63  MIETLKMEHHLEAHKNGHANGHLNIGVDIPTPDGSFSIKIKP----NGMPNGYRKEMIKI 118
           + +  K+          H +    +G +  +P GS +  I      + + NG        
Sbjct: 72  VRKLQKI----------HIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCDG 121

Query: 119 PMPELERSQYPM--------------EWGKTFLAFLYALSCFVLTTVMISVVHERVPPKE 164
           P+ +L   QY                E+ KT L+ +Y    F  T+ ++ +VHERVP  +
Sbjct: 122 PITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDMQ 181

Query: 165 VQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYL 224
             PPLPD F D   R+ WAF++ E+ GMIL  +WL+  LL K++SI+ RR   ++GT++L
Sbjct: 182 TYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVFL 241

Query: 225 YRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSG 284
            RC TM+VT+L VPG H  C+ K++G    +L R   + +G G+++TG H  CGDY++SG
Sbjct: 242 LRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHT-CGDYMFSG 300

Query: 285 HTVMLTLTYLFIKE 298
           HTV+LT+   F+ E
Sbjct: 301 HTVVLTMLNFFVTE 314


>gi|74316006 CNKSR family member 3 [Homo sapiens]
          Length = 555

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 1  MKEVVYWSPKKVADWL--LENAMPEYCEPLEH--FTGQDLINLTQEDFKKPPLCRV 52
          M+ V  WSPK+V DW   L++ + +Y    E     G+ L+ ++ +D ++  + R+
Sbjct: 1  MEPVTKWSPKQVVDWTRGLDDCLQQYVHKFEREKINGEQLLQISHQDLEELGVTRI 56


>gi|29294627 PTPRF interacting protein binding protein 1 isoform 1
           [Homo sapiens]
          Length = 1005

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 7   WSPKKVADWLLENAMPEYCEPLEHF--TGQDLINLTQEDFKK 46
           W+ ++V +WL+E  +  Y    +H+  +GQ L+  +Q+D +K
Sbjct: 641 WTKEQVCNWLMEQGLGSYLNSGKHWIASGQTLLQASQQDLEK 682


>gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo
           sapiens]
          Length = 540

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 10  KKVADWLLENAMPEYCEPLEHFTGQDLINLTQED 43
           ++   WLL+N    Y     +F+G DL+ LT+ED
Sbjct: 371 QETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 404


>gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo
           sapiens]
          Length = 504

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 10  KKVADWLLENAMPEYCEPLEHFTGQDLINLTQED 43
           ++   WLL+N    Y     +F+G DL+ LT+ED
Sbjct: 335 QETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 368


>gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo
           sapiens]
          Length = 540

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 10  KKVADWLLENAMPEYCEPLEHFTGQDLINLTQED 43
           ++   WLL+N    Y     +F+G DL+ LT+ED
Sbjct: 371 QETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 404


>gi|41393057 connector enhancer of kinase suppressor of Ras 2
          [Homo sapiens]
          Length = 1034

 Score = 32.7 bits (73), Expect = 0.62
 Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 6/71 (8%)

Query: 1  MKEVVYWSPKKVADWL--LENAMPEYCEPLEH--FTGQDLINLTQEDFKKPPLCRVSSDN 56
          M+ V  WSP +V DW+  L++ + +Y +  E    +G  L+ +T ++ +   + R+   +
Sbjct: 5  MEPVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIG--H 62

Query: 57 GQRLLDMIETL 67
           + +L+ ++ L
Sbjct: 63 QELILEAVDLL 73


>gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [Homo
           sapiens]
          Length = 1009

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%)

Query: 313 LLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVLKEASQMNL 364
           L S  G+FCIL       + +++A  +     WW     +Q+  KE  ++NL
Sbjct: 828 LHSFAGVFCIL------AIGLLLACLVAALELWWNSNRCHQETPKEDKEVNL 873


>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
          Length = 674

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 7/72 (9%)

Query: 3   EVVYWSPKKVADWLLENAMPEY--CEPLEHFTGQDLI-----NLTQEDFKKPPLCRVSSD 55
           E + W P++VA+W+ +   P+Y  C      +G+ LI     NL Q         +  S 
Sbjct: 541 EHLNWDPEEVAEWISQLGFPQYKECFITNFISGRKLIHVNCSNLPQMGITNFEDMKAISR 600

Query: 56  NGQRLLDMIETL 67
           + Q LL++ E L
Sbjct: 601 HTQELLEIEEPL 612


>gi|21361278 transcription factor CP2 [Homo sapiens]
          Length = 502

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 8   SPKKVADWLLENAMPEYCEPLEHFTGQDLINLTQED 43
           +P++   WL  N    +     +F+G DL+ LT++D
Sbjct: 329 TPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRDD 364


>gi|7706091 bifunctional apoptosis regulator [Homo sapiens]
          Length = 450

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 2   KEVVYWSPKKVADWLLENAMPEYCEPLEHF-----TGQDLINLTQEDFKKPPLCRVSSDN 56
           K V  W+ ++V  WL E   P      E F      G+ L+ LT+E+F K P    +S +
Sbjct: 177 KAVAKWTAEEVVLWL-EQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSH 235

Query: 57  GQRLLDMIETLK 68
            + +L  +E +K
Sbjct: 236 RRAILMELERVK 247


>gi|169211538 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 123

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 6/48 (12%)

Query: 306 WYHWICWLLSVVGIFCILLAHDHYT------VDVVVAYYITTRLFWWY 347
           W  W+   L  +G  C L   D +        D V AY + TR+ W Y
Sbjct: 51  WSFWLLKKLVTIGSLCALACLDVFCCSQVEKADFVAAYLLKTRMEWSY 98


>gi|169211944 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 123

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 6/48 (12%)

Query: 306 WYHWICWLLSVVGIFCILLAHDHYT------VDVVVAYYITTRLFWWY 347
           W  W+   L  +G  C L   D +        D V AY + TR+ W Y
Sbjct: 51  WSFWLLKKLVTIGSLCALACLDVFCCSQVEKADFVAAYLLKTRMEWSY 98


>gi|169210722 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 123

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 6/48 (12%)

Query: 306 WYHWICWLLSVVGIFCILLAHDHYT------VDVVVAYYITTRLFWWY 347
           W  W+   L  +G  C L   D +        D V AY + TR+ W Y
Sbjct: 51  WSFWLLKKLVTIGSLCALACLDVFCCSQVEKADFVAAYLLKTRMEWSY 98


>gi|188595682 ankyrin 2 isoform 3 [Homo sapiens]
          Length = 1863

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/89 (19%), Positives = 40/89 (44%)

Query: 29   EHFTGQDLINLTQEDFKKPPLCRVSSDNGQRLLDMIETLKMEHHLEAHKNGHANGHLNIG 88
            E   G D +  + ED +K  +CR+ + +  +   ++  +K + +L   + G  +  +   
Sbjct: 1110 EILNGMDEVLDSPEDLEKKRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVLSSTVVPQ 1169

Query: 89   VDIPTPDGSFSIKIKPNGMPNGYRKEMIK 117
            V    P+G+ + +I+          E++K
Sbjct: 1170 VQAVFPEGALTKRIRVGLQAQPMHSELVK 1198


>gi|52426737 ankyrin 2 isoform 2 [Homo sapiens]
          Length = 1872

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/89 (19%), Positives = 40/89 (44%)

Query: 29   EHFTGQDLINLTQEDFKKPPLCRVSSDNGQRLLDMIETLKMEHHLEAHKNGHANGHLNIG 88
            E   G D +  + ED +K  +CR+ + +  +   ++  +K + +L   + G  +  +   
Sbjct: 1119 EILNGMDEVLDSPEDLEKKRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVLSSTVVPQ 1178

Query: 89   VDIPTPDGSFSIKIKPNGMPNGYRKEMIK 117
            V    P+G+ + +I+          E++K
Sbjct: 1179 VQAVFPEGALTKRIRVGLQAQPMHSELVK 1207


>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
          Length = 3957

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/89 (19%), Positives = 40/89 (44%)

Query: 29   EHFTGQDLINLTQEDFKKPPLCRVSSDNGQRLLDMIETLKMEHHLEAHKNGHANGHLNIG 88
            E   G D +  + ED +K  +CR+ + +  +   ++  +K + +L   + G  +  +   
Sbjct: 1119 EILNGMDEVLDSPEDLEKKRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVLSSTVVPQ 1178

Query: 89   VDIPTPDGSFSIKIKPNGMPNGYRKEMIK 117
            V    P+G+ + +I+          E++K
Sbjct: 1179 VQAVFPEGALTKRIRVGLQAQPMHSELVK 1207


>gi|57222565 protein phosphatase 2, catalytic subunit, beta isoform
           [Homo sapiens]
          Length = 309

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 244 CSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLF-IKEYSPR 302
           C   + GD   Q   +M+L   GG S   ++   GDY+  G+  + T+T L  +K   P 
Sbjct: 50  CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPE 109

Query: 303 RL 304
           R+
Sbjct: 110 RI 111


>gi|4758952 protein phosphatase 2, catalytic subunit, beta isoform
           [Homo sapiens]
          Length = 309

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 244 CSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLF-IKEYSPR 302
           C   + GD   Q   +M+L   GG S   ++   GDY+  G+  + T+T L  +K   P 
Sbjct: 50  CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPE 109

Query: 303 RL 304
           R+
Sbjct: 110 RI 111


>gi|11464975 elongation of very long chain fatty acids-like 5 [Homo
           sapiens]
          Length = 299

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 302 RRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRL-FWWY 347
           R LWWY++   L+  +  F  +L  +++ + V+  Y+  + L  WW+
Sbjct: 111 RVLWWYYF-SKLIEFMDTFFFILRKNNHQITVLHVYHHASMLNIWWF 156


>gi|94721259 solute carrier family 26, member 6 isoform 4 [Homo
           sapiens]
          Length = 738

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 119 PMPELERSQYPMEWGKTFLAFLYALS------CFVLTTVMISVVHERVPPKEVQPPLPDT 172
           P+  L  S YP+     F+ FL+  S       F + +VM+  V E + P+ +   + + 
Sbjct: 98  PVFGLYSSFYPV-----FIYFLFGTSRHISVGTFAVMSVMVGSVTESLAPQALNDSMINE 152

Query: 173 FFDHFNRVQWAFSICEINGMILVGLWLIQW 202
                 RVQ A ++  + G+  VGL LI +
Sbjct: 153 TARDAARVQVASTLSVLVGLFQVGLGLIHF 182


>gi|94721257 solute carrier family 26, member 6 isoform 3 [Homo
           sapiens]
          Length = 740

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 119 PMPELERSQYPMEWGKTFLAFLYALS------CFVLTTVMISVVHERVPPKEVQPPLPDT 172
           P+  L  S YP+     F+ FL+  S       F + +VM+  V E + P+ +   + + 
Sbjct: 119 PVFGLYSSFYPV-----FIYFLFGTSRHISVGTFAVMSVMVGSVTESLAPQALNDSMINE 173

Query: 173 FFDHFNRVQWAFSICEINGMILVGLWLIQW 202
                 RVQ A ++  + G+  VGL LI +
Sbjct: 174 TARDAARVQVASTLSVLVGLFQVGLGLIHF 203


>gi|94721255 solute carrier family 26, member 6 isoform 2 [Homo
           sapiens]
          Length = 758

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 119 PMPELERSQYPMEWGKTFLAFLYALS------CFVLTTVMISVVHERVPPKEVQPPLPDT 172
           P+  L  S YP+     F+ FL+  S       F + +VM+  V E + P+ +   + + 
Sbjct: 119 PVFGLYSSFYPV-----FIYFLFGTSRHISVGTFAVMSVMVGSVTESLAPQALNDSMINE 173

Query: 173 FFDHFNRVQWAFSICEINGMILVGLWLIQW 202
                 RVQ A ++  + G+  VGL LI +
Sbjct: 174 TARDAARVQVASTLSVLVGLFQVGLGLIHF 203


>gi|94721253 solute carrier family 26, member 6 isoform 1 [Homo
           sapiens]
          Length = 759

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 119 PMPELERSQYPMEWGKTFLAFLYALS------CFVLTTVMISVVHERVPPKEVQPPLPDT 172
           P+  L  S YP+     F+ FL+  S       F + +VM+  V E + P+ +   + + 
Sbjct: 119 PVFGLYSSFYPV-----FIYFLFGTSRHISVGTFAVMSVMVGSVTESLAPQALNDSMINE 173

Query: 173 FFDHFNRVQWAFSICEINGMILVGLWLIQW 202
                 RVQ A ++  + G+  VGL LI +
Sbjct: 174 TARDAARVQVASTLSVLVGLFQVGLGLIHF 203


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.141    0.480 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,149,467
Number of Sequences: 37866
Number of extensions: 774435
Number of successful extensions: 2074
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2036
Number of HSP's gapped (non-prelim): 35
length of query: 413
length of database: 18,247,518
effective HSP length: 105
effective length of query: 308
effective length of database: 14,271,588
effective search space: 4395649104
effective search space used: 4395649104
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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