Guide to the Human Genome
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Name: ELOVL5 Sequence: fasta or formatted (299aa) NCBI GI: 11464975
Description:

elongation of very long chain fatty acids-like 5

Referenced in:

Fatty Acid Synthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0          9           2
 C cysteine            2.3          7           1
 D aspartate           2.7          8           1
 E glutamate           2.0          6           1
 F phenylalanine       7.4         22           3
 G glycine             6.4         19           1
 H histidine           3.3         10           2
 I isoleucine          6.7         20           2
 K lysine              5.7         17           2
 L leucine            11.4         34           2
 M methionine          3.7         11           1
 N asparagine          5.4         16           2
 P proline             3.7         11           1
 Q glutamine           3.3         10           1
 R arginine            4.0         12           2
 S serine              6.7         20           2
 T threonine           5.7         17           1
 V valine              6.0         18           2
 W tryptophan          4.0         12           2
 Y tyrosine            6.7         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elongation of very long chain fatty acids-like 5 [Ho... 
ELOVL2                0.558   elongation of very long chain fatty acids-like 2 [H...
ELOVL4                0.364   elongation of very long chain fatty acids-like 4 [Ho...
ELOVL1                0.254   elongation of very long chain fatty acids-like 1 [Ho...
ELOVL7                0.250   elongation of very long chain fatty acids-like 7 [H...
ELOVL7                0.250   elongation of very long chain fatty acids-like 7 [H...
ELOVL3                0.094   elongation of very long chain fatty acids like 3 [Ho...
ELOVL6                0.080   elongation of very long chain fatty acids-like 6 [H...
ELOVL6                0.080   elongation of very long chain fatty acids-like 6 [Ho...
PTCH1                 0.011   patched isoform S 
PTCH1                 0.011   patched isoform S 
PTCH1                 0.011   patched isoform S 
PTCH1                 0.011   patched isoform S 
PTCH1                 0.011   patched isoform L' 
PTCH1                 0.011   patched isoform M 
PTCH1                 0.011   patched isoform L 
TMEM120B              0.010   transmembrane protein 120B 
ATP10A                0.008   ATPase, class V, type 10A 
SGMS1                 0.007   sphingomyelin synthase 1 
KCNU1                 0.007   potassium channel, subfamily U, member 1 
OR7D4                 0.007   olfactory receptor, family 7, subfamily D, member 4 ...
OR1J4                 0.007   olfactory receptor, family 1, subfamily J, member 4 ...
CNTNAP1               0.005   contactin associated protein 1 precursor 
TMEM120A              0.005   transmembrane protein 120A 
NMUR2                 0.005   neuromedin U receptor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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