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Search of human proteins with 29741322
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29741322 PREDICTED: similar to lectin, galactoside-binding,
soluble, 14 isoform 1 [Homo sapiens]
(142 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29741322 PREDICTED: similar to lectin, galactoside-binding, s... 292 7e-80
gi|169213906 PREDICTED: similar to lectin, galactoside-binding, ... 289 5e-79
gi|89057453 PREDICTED: similar to lectin, galactoside-binding, s... 289 5e-79
gi|169213288 PREDICTED: similar to lectin, galactoside-binding, ... 283 3e-77
gi|169213908 PREDICTED: similar to lectin, galactoside-binding, ... 280 2e-76
gi|169214331 PREDICTED: similar to lectin, galactoside-binding, ... 280 2e-76
gi|7019497 galectin-13 [Homo sapiens] 209 6e-55
gi|9910348 lectin, galactoside-binding, soluble, 14 isoform 1 [H... 173 5e-44
gi|45439325 lectin, galactoside-binding, soluble, 14 isoform 2 [... 170 4e-43
gi|20357559 Charcot-Leyden crystal protein [Homo sapiens] 147 3e-36
gi|223633967 hypothetical protein LOC400696 [Homo sapiens] 120 3e-28
gi|5453712 galectin-4 [Homo sapiens] 69 1e-12
gi|111494237 galectin-9 like [Homo sapiens] 66 8e-12
gi|6806890 galectin-9 isoform long [Homo sapiens] 65 1e-11
gi|111494239 galectin 9 like [Homo sapiens] 65 1e-11
gi|4504985 galectin-7 [Homo sapiens] 64 4e-11
gi|109948279 galectin-7B [Homo sapiens] 64 4e-11
gi|102469694 galectin-9 isoform short [Homo sapiens] 63 7e-11
gi|42544193 galectin-8 isoform a [Homo sapiens] 56 1e-08
gi|42544191 galectin-8 isoform b [Homo sapiens] 56 1e-08
gi|42544187 galectin-8 isoform b [Homo sapiens] 56 1e-08
gi|42544185 galectin-8 isoform a [Homo sapiens] 56 1e-08
gi|115430223 galectin 3 [Homo sapiens] 51 4e-07
gi|216547811 lectin, galactoside-binding, soluble, 12 isoform 3 ... 47 5e-06
gi|20127659 lectin, galactoside-binding, soluble, 12 isoform 2 [... 47 5e-06
gi|216547809 lectin, galactoside-binding, soluble, 12 isoform 1 ... 46 1e-05
gi|216547832 lectin, galactoside-binding, soluble, 12 isoform 5 ... 42 1e-04
gi|216547818 lectin, galactoside-binding, soluble, 12 isoform 4 ... 42 1e-04
gi|156151366 hypothetical protein LOC29094 [Homo sapiens] 30 0.88
gi|4504981 galectin-1 [Homo sapiens] 29 1.1
>gi|29741322 PREDICTED: similar to lectin, galactoside-binding,
soluble, 14 isoform 1 [Homo sapiens]
Length = 142
Score = 292 bits (747), Expect = 7e-80
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR
Sbjct: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY
Sbjct: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
Query: 121 VKMIQVWRDVSLDSVLVNNGRR 142
VKMIQVWRDVSLDSVLVNNGRR
Sbjct: 121 VKMIQVWRDVSLDSVLVNNGRR 142
>gi|169213906 PREDICTED: similar to lectin, galactoside-binding,
soluble, 14 isoform 2 [Homo sapiens]
Length = 142
Score = 289 bits (740), Expect = 5e-79
Identities = 141/142 (99%), Positives = 141/142 (99%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR
Sbjct: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVC NEYEVKVNGEYIYAFVHRIPPSY
Sbjct: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYEVKVNGEYIYAFVHRIPPSY 120
Query: 121 VKMIQVWRDVSLDSVLVNNGRR 142
VKMIQVWRDVSLDSVLVNNGRR
Sbjct: 121 VKMIQVWRDVSLDSVLVNNGRR 142
>gi|89057453 PREDICTED: similar to lectin, galactoside-binding,
soluble, 14 isoform 1 [Homo sapiens]
Length = 142
Score = 289 bits (740), Expect = 5e-79
Identities = 141/142 (99%), Positives = 141/142 (99%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR
Sbjct: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVC NEYEVKVNGEYIYAFVHRIPPSY
Sbjct: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYEVKVNGEYIYAFVHRIPPSY 120
Query: 121 VKMIQVWRDVSLDSVLVNNGRR 142
VKMIQVWRDVSLDSVLVNNGRR
Sbjct: 121 VKMIQVWRDVSLDSVLVNNGRR 142
>gi|169213288 PREDICTED: similar to lectin, galactoside-binding,
soluble, 14 [Homo sapiens]
Length = 172
Score = 283 bits (724), Expect = 3e-77
Identities = 137/142 (96%), Positives = 139/142 (97%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
+ + VPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR
Sbjct: 31 LMIVRVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 90
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY
Sbjct: 91 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 150
Query: 121 VKMIQVWRDVSLDSVLVNNGRR 142
VKMIQVWRDVSLDSVLVNNGRR
Sbjct: 151 VKMIQVWRDVSLDSVLVNNGRR 172
>gi|169213908 PREDICTED: similar to lectin, galactoside-binding,
soluble, 14 isoform 1 [Homo sapiens]
Length = 172
Score = 280 bits (717), Expect = 2e-76
Identities = 136/142 (95%), Positives = 138/142 (97%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
+ + VPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR
Sbjct: 31 LMIVRVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 90
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVC NEYEVKVNGEYIYAFVHRIPPSY
Sbjct: 91 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYEVKVNGEYIYAFVHRIPPSY 150
Query: 121 VKMIQVWRDVSLDSVLVNNGRR 142
VKMIQVWRDVSLDSVLVNNGRR
Sbjct: 151 VKMIQVWRDVSLDSVLVNNGRR 172
>gi|169214331 PREDICTED: similar to lectin, galactoside-binding,
soluble, 14 [Homo sapiens]
Length = 172
Score = 280 bits (717), Expect = 2e-76
Identities = 136/142 (95%), Positives = 138/142 (97%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
+ + VPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR
Sbjct: 31 LMIVRVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 90
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVC NEYEVKVNGEYIYAFVHRIPPSY
Sbjct: 91 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYEVKVNGEYIYAFVHRIPPSY 150
Query: 121 VKMIQVWRDVSLDSVLVNNGRR 142
VKMIQVWRDVSLDSVLVNNGRR
Sbjct: 151 VKMIQVWRDVSLDSVLVNNGRR 172
>gi|7019497 galectin-13 [Homo sapiens]
Length = 139
Score = 209 bits (532), Expect = 6e-55
Identities = 105/139 (75%), Positives = 114/139 (82%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
MS L VPYKLPVSLSVGSCVIIKGT I S IN+PQLQVDFYT+M+EDS+IAF RVH G
Sbjct: 1 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSDIAFRFRVHFGN 60
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
VVMN REFGIWMLEE YVPFEDGK F+L IYV NEYE+KVNG IY FVHRIPPS+
Sbjct: 61 HVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGIRIYGFVHRIPPSF 120
Query: 121 VKMIQVWRDVSLDSVLVNN 139
VKM+QV RD+SL SV V N
Sbjct: 121 VKMVQVSRDISLTSVCVCN 139
>gi|9910348 lectin, galactoside-binding, soluble, 14 isoform 1 [Homo
sapiens]
Length = 139
Score = 173 bits (438), Expect = 5e-44
Identities = 84/139 (60%), Positives = 105/139 (75%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
MS L VPY LPVSL VGSCVII GT I + + +PQL+V+FYT M+EDS+IAF R+H G
Sbjct: 1 MSSLPVPYTLPVSLPVGSCVIITGTPILTFVKDPQLEVNFYTGMDEDSDIAFQFRLHFGH 60
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
+MNS FGIW EE +Y+PFEDGKPF+L IYV EY+V VNG+ IY F HR PP+
Sbjct: 61 PAIMNSCVFGIWRYEEKCYYLPFEDGKPFELCIYVRHKEYKVMVNGQRIYNFAHRFPPAS 120
Query: 121 VKMIQVWRDVSLDSVLVNN 139
VKM+QV+RD+SL VL+++
Sbjct: 121 VKMLQVFRDISLTRVLISD 139
>gi|45439325 lectin, galactoside-binding, soluble, 14 isoform 2
[Homo sapiens]
Length = 168
Score = 170 bits (430), Expect = 4e-43
Identities = 81/136 (59%), Positives = 103/136 (75%)
Query: 4 LTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRRVV 63
+ VPY LPVSL VGSCVII GT I + + +PQL+V+FYT M+EDS+IAF R+H G +
Sbjct: 33 IVVPYTLPVSLPVGSCVIITGTPILTFVKDPQLEVNFYTGMDEDSDIAFQFRLHFGHPAI 92
Query: 64 MNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKM 123
MNS FGIW EE +Y+PFEDGKPF+L IYV EY+V VNG+ IY F HR PP+ VKM
Sbjct: 93 MNSCVFGIWRYEEKCYYLPFEDGKPFELCIYVRHKEYKVMVNGQRIYNFAHRFPPASVKM 152
Query: 124 IQVWRDVSLDSVLVNN 139
+QV+RD+SL VL+++
Sbjct: 153 LQVFRDISLTRVLISD 168
>gi|20357559 Charcot-Leyden crystal protein [Homo sapiens]
Length = 142
Score = 147 bits (371), Expect = 3e-36
Identities = 75/142 (52%), Positives = 95/142 (66%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
MS L VPY SLS GS V IKG + +NEP LQVDF+TEM E+S+I FH +V GR
Sbjct: 1 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR 60
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
RVVMNSRE+G W + +PF+DG+ F+L I V ++Y+V VNG+ Y F HRI P
Sbjct: 61 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA 120
Query: 121 VKMIQVWRDVSLDSVLVNNGRR 142
VKM+QVWRD+SL V+ +R
Sbjct: 121 VKMVQVWRDISLTKFNVSYLKR 142
>gi|223633967 hypothetical protein LOC400696 [Homo sapiens]
Length = 151
Score = 120 bits (302), Expect = 3e-28
Identities = 61/101 (60%), Positives = 72/101 (71%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
MS L VP+ PVSLS GSCVII GT I + +PQLQVDF+TEM EDS+IAFH RV+ G
Sbjct: 1 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH 60
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYE 101
VVMNSR G W E H +PF+DGKPF+L I V +EY+
Sbjct: 61 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101
>gi|5453712 galectin-4 [Homo sapiens]
Length = 323
Score = 69.3 bits (168), Expect = 1e-12
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 5 TVPYKLPV--SLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR-- 60
T+PY P+ L+VG V I+G +S + + V+F + S++AFH
Sbjct: 16 TLPYYQPIPGGLNVGMSVYIQGV---ASEHMKRFFVNFVVGQDPGSDVAFHFNPRFDGWD 72
Query: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSY 120
+VV N+ + G W EE +PF+ G F+L V Y+V VNG Y + HR+P
Sbjct: 73 KVVFNTLQGGKWGSEERKRSMPFKKGAAFELVFIVLAEHYKVVVNGNPFYEYGHRLPLQM 132
Query: 121 VKMIQVWRDVSLDSV 135
V +QV D+ L S+
Sbjct: 133 VTHLQVDGDLQLQSI 147
Score = 51.6 bits (122), Expect = 2e-07
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 6 VPY--KLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR-RV 62
VPY +L L+ +IIKG + + ++F ++ +IA H+ +G V
Sbjct: 192 VPYFGRLQGGLTARRTIIIKGYVPPTG---KSFAINF--KVGSSGDIALHINPRMGNGTV 246
Query: 63 VMNSREFGIWMLEEN-LHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPP-SY 120
V NS G W EE + + PF G+ FDL I L+ ++V NG++++ F HR+
Sbjct: 247 VRNSLLNGSWGSEEKKITHNPFGPGQFFDLSIRCGLDRFKVYANGQHLFDFAHRLSAFQR 306
Query: 121 VKMIQVWRDVSLDSVLV 137
V +++ DV+L V +
Sbjct: 307 VDTLEIQGDVTLSYVQI 323
>gi|111494237 galectin-9 like [Homo sapiens]
Length = 355
Score = 66.2 bits (160), Expect = 8e-12
Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 14 LSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHL--RVHLGRRVVMNSREFGI 71
L G + + G ++ SS + VDF T + ++IAFH R G VV N+R+ G
Sbjct: 25 LQDGFQITVNGAVLSSS--GTRFAVDFQTGFS-GNDIAFHFNPRFEDGGYVVCNTRQKGR 81
Query: 72 WMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVWRDVS 131
W EE ++PF+ G PFDL V ++++V VNG + HR+P V I V V
Sbjct: 82 WGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLFVQYFHRVPFHRVDTISVNGSVQ 141
Query: 132 LDSVLVNNGR 141
L + N R
Sbjct: 142 LSYISFQNPR 151
Score = 40.8 bits (94), Expect = 4e-04
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
M F+T +P L +I+ GT++ S+ F+ + S IAFH+
Sbjct: 225 MPFITT---IPGGLYPSKSIILSGTVLPSAQR-------FHINLCSGSHIAFHMNPRFDE 274
Query: 61 R-VVMNSREFGIWMLEENL--HYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIP 117
VV N++ W EE +PF G+ F + I + +V V+G++++ + HR+
Sbjct: 275 NAVVRNTQINNSWGSEERSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHVFEYYHRLR 334
Query: 118 P-SYVKMIQVWRDVSLDSV 135
+ ++V D+ L V
Sbjct: 335 NLPTINKLEVGGDIQLTHV 353
>gi|6806890 galectin-9 isoform long [Homo sapiens]
Length = 355
Score = 65.5 bits (158), Expect = 1e-11
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 14 LSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHL--RVHLGRRVVMNSREFGI 71
L G + + GT++ SS + V+F T + ++IAFH R G VV N+R+ G
Sbjct: 25 LQDGLQITVNGTVLSSS--GTRFAVNFQTGFS-GNDIAFHFNPRFEDGGYVVCNTRQNGS 81
Query: 72 WMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVWRDVS 131
W EE ++PF+ G PFDL V ++++V VNG + HR+P V I V V
Sbjct: 82 WGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVPFHRVDTISVNGSVQ 141
Query: 132 LDSVLVNNGR 141
L + N R
Sbjct: 142 LSYISFQNPR 151
Score = 36.2 bits (82), Expect = 0.009
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 20 VIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRR-VVMNSREFGIWMLEENL 78
+++ GT++ S+ F+ + + IAFHL VV N++ W EE
Sbjct: 241 ILLSGTVLPSAQR-------FHINLCSGNHIAFHLNPRFDENAVVRNTQIDNSWGSEERS 293
Query: 79 --HYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPP-SYVKMIQVWRDVSLDSV 135
+PF G+ F + I + +V V+G++++ + HR+ + ++V D+ L V
Sbjct: 294 LPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHV 353
>gi|111494239 galectin 9 like [Homo sapiens]
Length = 356
Score = 65.5 bits (158), Expect = 1e-11
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 14 LSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHL--RVHLGRRVVMNSREFGI 71
L G + + G ++ S + + VDF T + ++IAFH R G VV N+R+ G
Sbjct: 25 LQDGFQITVNGAVL--SCSGTRFAVDFQTGFS-GNDIAFHFNPRFEDGGYVVCNTRQKGT 81
Query: 72 WMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVWRDVS 131
W EE ++PF+ G PFDL V ++++V VNG + HR+P V I V V
Sbjct: 82 WGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLFVQYFHRVPFHRVDTISVNGSVQ 141
Query: 132 LDSVLVNNGR 141
L + N R
Sbjct: 142 LSYISFQNPR 151
Score = 40.8 bits (94), Expect = 4e-04
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60
M F+T +P L +I+ GT++ S+ F+ + S IAFH+
Sbjct: 226 MPFITT---IPGGLYPSKSIILSGTVLPSAQR-------FHINLCSGSHIAFHMNPRFDE 275
Query: 61 R-VVMNSREFGIWMLEENL--HYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIP 117
VV N++ W EE +PF G+ F + I + +V V+G++++ + HR+
Sbjct: 276 NAVVRNTQINNSWGSEERSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHVFEYYHRLR 335
Query: 118 P-SYVKMIQVWRDVSLDSV 135
+ ++V D+ L V
Sbjct: 336 NLPTINKLEVGGDIQLTHV 354
>gi|4504985 galectin-7 [Homo sapiens]
Length = 136
Score = 63.9 bits (154), Expect = 4e-11
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 6 VPYK--LPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR-RV 62
VP+K LP + G+ + I+G + N + V+ + S+ A H L V
Sbjct: 4 VPHKSSLPEGIRPGTVLRIRGLVPP---NASRFHVNLLCGEEQGSDAALHFNPRLDTSEV 60
Query: 63 VMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVK 122
V NS+E G W EE VPF+ G+PF++ I + ++ V + F HR+P + V+
Sbjct: 61 VFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVR 120
Query: 123 MIQVWRDVSLDSVLV 137
+++V DV LDSV +
Sbjct: 121 LVEVGGDVQLDSVRI 135
>gi|109948279 galectin-7B [Homo sapiens]
Length = 136
Score = 63.9 bits (154), Expect = 4e-11
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 6 VPYK--LPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR-RV 62
VP+K LP + G+ + I+G + N + V+ + S+ A H L V
Sbjct: 4 VPHKSSLPEGIRPGTVLRIRGLVPP---NASRFHVNLLCGEEQGSDAALHFNPRLDTSEV 60
Query: 63 VMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVK 122
V NS+E G W EE VPF+ G+PF++ I + ++ V + F HR+P + V+
Sbjct: 61 VFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVR 120
Query: 123 MIQVWRDVSLDSVLV 137
+++V DV LDSV +
Sbjct: 121 LVEVGGDVQLDSVRI 135
>gi|102469694 galectin-9 isoform short [Homo sapiens]
Length = 323
Score = 63.2 bits (152), Expect = 7e-11
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 14 LSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHL--RVHLGRRVVMNSREFGI 71
L G + + GT++ SS + V+F T + ++IAFH R G VV N+R+ G
Sbjct: 25 LQDGLQITVNGTVLSSS--GTRFAVNFQTGFS-GNDIAFHFNPRFEDGGYVVCNTRQNGS 81
Query: 72 WMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVWRDVS 131
W EE ++PF+ G PFDL V ++++V VNG + HR+P V I V V
Sbjct: 82 WGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVPFHRVDTISVNGSVQ 141
Query: 132 LDSV 135
L +
Sbjct: 142 LSYI 145
Score = 36.2 bits (82), Expect = 0.009
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 20 VIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRR-VVMNSREFGIWMLEENL 78
+++ GT++ S+ F+ + + IAFHL VV N++ W EE
Sbjct: 209 ILLSGTVLPSAQR-------FHINLCSGNHIAFHLNPRFDENAVVRNTQIDNSWGSEERS 261
Query: 79 --HYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPP-SYVKMIQVWRDVSLDSV 135
+PF G+ F + I + +V V+G++++ + HR+ + ++V D+ L V
Sbjct: 262 LPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHV 321
>gi|42544193 galectin-8 isoform a [Homo sapiens]
Length = 359
Score = 55.8 bits (133), Expect = 1e-08
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 10 LPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRR--VVMNSR 67
+P L G+ ++I+G + S + Q+ + + M +++AFH R +V N+
Sbjct: 23 IPDQLDPGTLIVIRGH-VPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTL 81
Query: 68 EFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVW 127
W EE + PF+ K F++ I V ++++V VNG++ + HRI P + + ++
Sbjct: 82 INEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIY 141
Query: 128 RDVSLDSV 135
V++ S+
Sbjct: 142 GKVNIHSI 149
Score = 44.7 bits (104), Expect = 3e-05
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 9 KLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLG-RRVVMNSR 67
+L + G V++KG + + N VD ++D IA HL L + V NS
Sbjct: 232 RLNTPMGPGRTVVVKGEV---NANAKSFNVDLLAGKSKD--IALHLNPRLNIKAFVRNSF 286
Query: 68 EFGIWMLEE-NLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPP-SYVKMIQ 125
W EE N+ PF G F++ IY + E++V VNG + + HR S + ++
Sbjct: 287 LQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLE 346
Query: 126 VWRDVSL 132
+ D+ L
Sbjct: 347 INGDIHL 353
>gi|42544191 galectin-8 isoform b [Homo sapiens]
Length = 317
Score = 55.8 bits (133), Expect = 1e-08
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 10 LPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRR--VVMNSR 67
+P L G+ ++I+G + S + Q+ + + M +++AFH R +V N+
Sbjct: 23 IPDQLDPGTLIVIRGH-VPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTL 81
Query: 68 EFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVW 127
W EE + PF+ K F++ I V ++++V VNG++ + HRI P + + ++
Sbjct: 82 INEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIY 141
Query: 128 RDVSLDSV 135
V++ S+
Sbjct: 142 GKVNIHSI 149
Score = 45.1 bits (105), Expect = 2e-05
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 4 LTVPY--KLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLG-R 60
L +P+ +L + G V++KG + + N VD ++D IA HL L +
Sbjct: 183 LRLPFAARLNTPMGPGRTVVVKGEV---NANAKSFNVDLLAGKSKD--IALHLNPRLNIK 237
Query: 61 RVVMNSREFGIWMLEE-NLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPP- 118
V NS W EE N+ PF G F++ IY + E++V VNG + + HR
Sbjct: 238 AFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKEL 297
Query: 119 SYVKMIQVWRDVSL 132
S + +++ D+ L
Sbjct: 298 SSIDTLEINGDIHL 311
>gi|42544187 galectin-8 isoform b [Homo sapiens]
Length = 317
Score = 55.8 bits (133), Expect = 1e-08
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 10 LPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRR--VVMNSR 67
+P L G+ ++I+G + S + Q+ + + M +++AFH R +V N+
Sbjct: 23 IPDQLDPGTLIVIRGH-VPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTL 81
Query: 68 EFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVW 127
W EE + PF+ K F++ I V ++++V VNG++ + HRI P + + ++
Sbjct: 82 INEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIY 141
Query: 128 RDVSLDSV 135
V++ S+
Sbjct: 142 GKVNIHSI 149
Score = 45.1 bits (105), Expect = 2e-05
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 4 LTVPY--KLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLG-R 60
L +P+ +L + G V++KG + + N VD ++D IA HL L +
Sbjct: 183 LRLPFAARLNTPMGPGRTVVVKGEV---NANAKSFNVDLLAGKSKD--IALHLNPRLNIK 237
Query: 61 RVVMNSREFGIWMLEE-NLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPP- 118
V NS W EE N+ PF G F++ IY + E++V VNG + + HR
Sbjct: 238 AFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKEL 297
Query: 119 SYVKMIQVWRDVSL 132
S + +++ D+ L
Sbjct: 298 SSIDTLEINGDIHL 311
>gi|42544185 galectin-8 isoform a [Homo sapiens]
Length = 359
Score = 55.8 bits (133), Expect = 1e-08
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 10 LPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRR--VVMNSR 67
+P L G+ ++I+G + S + Q+ + + M +++AFH R +V N+
Sbjct: 23 IPDQLDPGTLIVIRGH-VPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTL 81
Query: 68 EFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVW 127
W EE + PF+ K F++ I V ++++V VNG++ + HRI P + + ++
Sbjct: 82 INEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIY 141
Query: 128 RDVSLDSV 135
V++ S+
Sbjct: 142 GKVNIHSI 149
Score = 44.7 bits (104), Expect = 3e-05
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 9 KLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLG-RRVVMNSR 67
+L + G V++KG + + N VD ++D IA HL L + V NS
Sbjct: 232 RLNTPMGPGRTVVVKGEV---NANAKSFNVDLLAGKSKD--IALHLNPRLNIKAFVRNSF 286
Query: 68 EFGIWMLEE-NLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPP-SYVKMIQ 125
W EE N+ PF G F++ IY + E++V VNG + + HR S + ++
Sbjct: 287 LQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLE 346
Query: 126 VWRDVSL 132
+ D+ L
Sbjct: 347 INGDIHL 353
>gi|115430223 galectin 3 [Homo sapiens]
Length = 250
Score = 50.8 bits (120), Expect = 4e-07
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 4 LTVPYKLPVSLSV--GSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLG-- 59
L VPY LP+ V + I GT+ N ++ +DF +++AFH
Sbjct: 114 LIVPYNLPLPGGVVPRMLITILGTV---KPNANRIALDF----QRGNDVAFHFNPRFNEN 166
Query: 60 --RRVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIP 117
R +V N++ W EE PFE GKPF +++ V + ++V VN ++ + HR+
Sbjct: 167 NRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVK 226
Query: 118 P-SYVKMIQVWRDVSLDS 134
+ + + + D+ L S
Sbjct: 227 KLNEISKLGISGDIDLTS 244
>gi|216547811 lectin, galactoside-binding, soluble, 12 isoform 3
[Homo sapiens]
Length = 327
Score = 47.0 bits (110), Expect = 5e-06
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 6 VPYKLPV--SLSVGSCVIIKGTLIDSSINEPQLQVDFYT--EMNEDSEIAFHL--RVHLG 59
VPY + L G V+++G + ++ + QVDF + +IAFH R H
Sbjct: 47 VPYVTTIFGGLHAGKMVMLQGVV---PLDAHRFQVDFQCGCSLCPRPDIAFHFNPRFHTT 103
Query: 60 R-RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPP 118
+ V+ N+ G W E ++ G F + E +V VNG++ F +R+P
Sbjct: 104 KPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRLPL 163
Query: 119 SYVKMIQVWRDVSLDSV 135
S+V + ++ D+ +++V
Sbjct: 164 SHVDTLGIFGDILVEAV 180
>gi|20127659 lectin, galactoside-binding, soluble, 12 isoform 2
[Homo sapiens]
Length = 336
Score = 47.0 bits (110), Expect = 5e-06
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 6 VPYKLPV--SLSVGSCVIIKGTLIDSSINEPQLQVDFYT--EMNEDSEIAFHL--RVHLG 59
VPY + L G V+++G + ++ + QVDF + +IAFH R H
Sbjct: 47 VPYVTTIFGGLHAGKMVMLQGVV---PLDAHRFQVDFQCGCSLCPRPDIAFHFNPRFHTT 103
Query: 60 R-RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIPP 118
+ V+ N+ G W E ++ G F + E +V VNG++ F +R+P
Sbjct: 104 KPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRLPL 163
Query: 119 SYVKMIQVWRDVSLDSV 135
S+V + ++ D+ +++V
Sbjct: 164 SHVDTLGIFGDILVEAV 180
>gi|216547809 lectin, galactoside-binding, soluble, 12 isoform 1
[Homo sapiens]
Length = 337
Score = 45.8 bits (107), Expect = 1e-05
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 6 VPYKLPV--SLSVGSCVIIKGTL-IDSSINEPQLQVDFYT--EMNEDSEIAFHL--RVHL 58
VPY + L G V+++G + +D+ + QVDF + +IAFH R H
Sbjct: 47 VPYVTTIFGGLHAGKMVMLQGVVPLDA---HSRFQVDFQCGCSLCPRPDIAFHFNPRFHT 103
Query: 59 GR-RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRIP 117
+ V+ N+ G W E ++ G F + E +V VNG++ F +R+P
Sbjct: 104 TKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRLP 163
Query: 118 PSYVKMIQVWRDVSLDSV 135
S+V + ++ D+ +++V
Sbjct: 164 LSHVDTLGIFGDILVEAV 181
>gi|216547832 lectin, galactoside-binding, soluble, 12 isoform 5
[Homo sapiens]
Length = 266
Score = 42.4 bits (98), Expect = 1e-04
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 35 QLQVDFYT--EMNEDSEIAFHL--RVHLGR-RVVMNSREFGIWMLEENLHYVPFEDGKPF 89
+ QVDF + +IAFH R H + V+ N+ G W E ++ G F
Sbjct: 14 RFQVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSF 73
Query: 90 DLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVWRDVSLDSV 135
+ E +V VNG++ F +R+P S+V + ++ D+ +++V
Sbjct: 74 LILFLFGNEEVKVSVNGQHFLHFRYRLPLSHVDTLGIFGDILVEAV 119
>gi|216547818 lectin, galactoside-binding, soluble, 12 isoform 4
[Homo sapiens]
Length = 275
Score = 42.4 bits (98), Expect = 1e-04
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 35 QLQVDFYT--EMNEDSEIAFHL--RVHLGR-RVVMNSREFGIWMLEENLHYVPFEDGKPF 89
+ QVDF + +IAFH R H + V+ N+ G W E ++ G F
Sbjct: 14 RFQVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSF 73
Query: 90 DLRIYVCLNEYEVKVNGEYIYAFVHRIPPSYVKMIQVWRDVSLDSV 135
+ E +V VNG++ F +R+P S+V + ++ D+ +++V
Sbjct: 74 LILFLFGNEEVKVSVNGQHFLHFRYRLPLSHVDTLGIFGDILVEAV 119
>gi|156151366 hypothetical protein LOC29094 [Homo sapiens]
Length = 172
Score = 29.6 bits (65), Expect = 0.88
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 17 GSCVIIKGTLIDSSINEPQLQVDFYTEMNED--SEIAFHLR-VHLGRRVVMNSREFGIWM 73
G V++ G + +N + +ED +++A L+ V R+++ NS G
Sbjct: 51 GKKVLVMGIV---DLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERG 107
Query: 74 LEEN-LHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRI 116
E++ + Y PF +PF + I + V V+G ++ F HRI
Sbjct: 108 EEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRI 151
>gi|4504981 galectin-1 [Homo sapiens]
Length = 135
Score = 29.3 bits (64), Expect = 1.1
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 19/114 (16%)
Query: 12 VSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRR---------V 62
++L G C+ ++G + + + F + +DS +L +H R +
Sbjct: 10 LNLKPGECLRVRGEVAPDAKS-------FVLNLGKDSN---NLCLHFNPRFNAHGDANTI 59
Query: 63 VMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYEVKVNGEYIYAFVHRI 116
V NS++ G W E+ PF+ G ++ I VK+ Y + F +R+
Sbjct: 60 VCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRL 113
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.141 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,185,521
Number of Sequences: 37866
Number of extensions: 208434
Number of successful extensions: 586
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 543
Number of HSP's gapped (non-prelim): 45
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.