Guide to the Human Genome
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Name: MAPK6 Sequence: fasta or formatted (721aa) NCBI GI: 4506091
Description:

mitogen-activated protein kinase 6

Referenced in:

MAP Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         30           2
 C cysteine            1.5         11           1
 D aspartate           7.4         53           2
 E glutamate           9.6         69           3
 F phenylalanine       4.0         29           2
 G glycine             4.9         35           2
 H histidine           4.0         29           2
 I isoleucine          5.4         39           2
 K lysine              6.2         45           2
 L leucine            11.0         79           3
 M methionine          2.4         17           1
 N asparagine          4.4         32           2
 P proline             4.4         32           1
 Q glutamine           4.7         34           2
 R arginine            3.6         26           2
 S serine              8.7         63           3
 T threonine           3.9         28           1
 V valine              5.0         36           2
 W tryptophan          1.1          8           1
 Y tyrosine            3.6         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 6 
MAPK4                 0.386   mitogen-activated protein kinase 4 
MAPK1                 0.172   mitogen-activated protein kinase 1 
MAPK1                 0.172   mitogen-activated protein kinase 1 
MAPK3                 0.170   mitogen-activated protein kinase 3 isoform 1 
MAPK3                 0.159   mitogen-activated protein kinase 3 isoform 2 
MAPK3                 0.157   mitogen-activated protein kinase 3 isoform 3 
MAPK7                 0.141   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.141   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.141   mitogen-activated protein kinase 7 isoform 1 
MAPK14                0.133   mitogen-activated protein kinase 14 isoform 2 
MAPK13                0.131   mitogen-activated protein kinase 13 
MAPK14                0.129   mitogen-activated protein kinase 14 isoform 1 
MAPK15                0.125   mitogen-activated protein kinase 15 
MAPK11                0.123   mitogen-activated protein kinase 11 
MAPK12                0.121   mitogen-activated protein kinase 12 
NLK                   0.117   nemo like kinase 
MAPK14                0.110   mitogen-activated protein kinase 14 isoform 3 
MAPK14                0.110   mitogen-activated protein kinase 14 isoform 4 
MAPK7                 0.108   mitogen-activated protein kinase 7 isoform 2 
MAPK10                0.103   mitogen-activated protein kinase 10 isoform 1 
MAPK10                0.103   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.103   mitogen-activated protein kinase 10 isoform 3 
MAPK8                 0.103   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.103   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.102   mitogen-activated protein kinase 8 isoform JNK1 alph...
MAPK8                 0.102   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK9                 0.100   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.100   mitogen-activated protein kinase 9 isoform JNK2 beta...
CCRK                  0.100   cell cycle related kinase isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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