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Search of human proteins with 122937187
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|122937187 glycosyltransferase 8 domain containing 4 [Homo
sapiens]
(443 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|122937187 glycosyltransferase 8 domain containing 4 [Homo sap... 920 0.0
gi|153791276 glycosyltransferase 8 domain containing 3 isoform 2... 463 e-130
gi|153791362 glycosyltransferase 8 domain containing 3 isoform 1... 457 e-129
gi|116235482 glycosyltransferase-like 1B [Homo sapiens] 76 5e-14
gi|19924141 like-glycosyltransferase [Homo sapiens] 54 2e-07
gi|4758664 like-glycosyltransferase [Homo sapiens] 54 2e-07
gi|112181295 hypothetical protein LOC152002 [Homo sapiens] 46 8e-05
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 41 0.002
gi|91208420 bassoon protein [Homo sapiens] 41 0.002
gi|116734689 socius isoform 3 [Homo sapiens] 41 0.002
gi|116734681 socius isoform 1 [Homo sapiens] 41 0.002
gi|116734679 socius isoform 2 [Homo sapiens] 41 0.002
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 41 0.002
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 40 0.003
gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [... 40 0.004
gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens] 40 0.004
gi|8922785 hypothetical protein LOC55267 [Homo sapiens] 39 0.009
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 39 0.012
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 39 0.012
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 38 0.016
gi|27734829 hypothetical protein LOC256329 [Homo sapiens] 38 0.016
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 37 0.028
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 37 0.028
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 37 0.028
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 37 0.028
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 37 0.028
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 37 0.028
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 37 0.036
gi|208431817 protein kinase-like protein SgK493 [Homo sapiens] 37 0.036
>gi|122937187 glycosyltransferase 8 domain containing 4 [Homo
sapiens]
Length = 443
Score = 920 bits (2379), Expect = 0.0
Identities = 443/443 (100%), Positives = 443/443 (100%)
Query: 1 MKLRSKAAALLLLALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGAL 60
MKLRSKAAALLLLALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGAL
Sbjct: 1 MKLRSKAAALLLLALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGAL 60
Query: 61 PGASPGVRRRRPPRPRPRAGRRGAARLEKLARRPGEPRSFQAVLPPELWIHLAVVACGNR 120
PGASPGVRRRRPPRPRPRAGRRGAARLEKLARRPGEPRSFQAVLPPELWIHLAVVACGNR
Sbjct: 61 PGASPGVRRRRPPRPRPRAGRRGAARLEKLARRPGEPRSFQAVLPPELWIHLAVVACGNR 120
Query: 121 LEETLVMLKSAVLFSHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFEHRIYPITFSVG 180
LEETLVMLKSAVLFSHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFEHRIYPITFSVG
Sbjct: 121 LEETLVMLKSAVLFSHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFEHRIYPITFSVG 180
Query: 181 NPQEWKKLFKPCAAQRLFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAM 240
NPQEWKKLFKPCAAQRLFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAM
Sbjct: 181 NPQEWKKLFKPCAAQRLFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAM 240
Query: 241 APEHEIPKIGWYSRFARHPFYGSAGVNSGVMLMNLTRIRSTQFKNSMIPTGLAWEDMLYP 300
APEHEIPKIGWYSRFARHPFYGSAGVNSGVMLMNLTRIRSTQFKNSMIPTGLAWEDMLYP
Sbjct: 241 APEHEIPKIGWYSRFARHPFYGSAGVNSGVMLMNLTRIRSTQFKNSMIPTGLAWEDMLYP 300
Query: 301 LYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCREAEHEGVSVLH 360
LYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCREAEHEGVSVLH
Sbjct: 301 LYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCREAEHEGVSVLH 360
Query: 361 GNRGVYHDDKQPTFRALYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTLCGRIPQVFLKQ 420
GNRGVYHDDKQPTFRALYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTLCGRIPQVFLKQ
Sbjct: 361 GNRGVYHDDKQPTFRALYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTLCGRIPQVFLKQ 420
Query: 421 IEKTMKRAYEKHVIIHVGPNQMH 443
IEKTMKRAYEKHVIIHVGPNQMH
Sbjct: 421 IEKTMKRAYEKHVIIHVGPNQMH 443
>gi|153791276 glycosyltransferase 8 domain containing 3 isoform 2
[Homo sapiens]
Length = 409
Score = 463 bits (1192), Expect = e-130
Identities = 218/355 (61%), Positives = 271/355 (76%), Gaps = 5/355 (1%)
Query: 80 GRRGAAR---LEKLARRPGEPRSFQAVLPPELWIHLAVVACGNRLEETLVMLKSAVLFSH 136
G RGA R + A PG + + P +HLAVVACG RLEET+ MLKSA++FS
Sbjct: 52 GGRGAVRGAGVAGPAAHPGVSDRYSLKIQPVEKMHLAVVACGERLEETMTMLKSAIIFSI 111
Query: 137 RKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFEHRIYPITFSVGNPQEWKKLFKPCAAQR 196
+ +QFHIF ED L F +L W S+ + F + +YPITF N EWKKLFKPCA+QR
Sbjct: 112 KPLQFHIFAEDQLHHSFKGRLDNW--SFLQTFNYTLYPITFPSENAAEWKKLFKPCASQR 169
Query: 197 LFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAMAPEHEIPKIGWYSRFA 256
LFLP+ILK+VDSLLYVDTD+LFLRPVDDIW LL+ FNSTQ+AAMAPEHE P+IGWY+RFA
Sbjct: 170 LFLPLILKEVDSLLYVDTDILFLRPVDDIWSLLKKFNSTQIAAMAPEHEEPRIGWYNRFA 229
Query: 257 RHPFYGSAGVNSGVMLMNLTRIRSTQFKNSMIPTGLAWEDMLYPLYQKYKNAITWGDQDL 316
RHP+YG GVNSGVMLMN+TR+R FKN M L W D+L PL +KYK ITWGDQDL
Sbjct: 230 RHPYYGKTGVNSGVMLMNMTRMRRKYFKNDMTTVRLQWGDILMPLLKKYKLNITWGDQDL 289
Query: 317 LNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCREAEHEGVSVLHGNRGVYHDDKQPTFRA 376
LNI+F+ NPE L+VFPCQWNYRPDHC+YGSNC+EAE G+ +LHGNRGVYHDDKQP FRA
Sbjct: 290 LNIVFFHNPESLFVFPCQWNYRPDHCIYGSNCQEAEEGGIFILHGNRGVYHDDKQPAFRA 349
Query: 377 LYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTLCGRIPQVFLKQIEKTMKRAYEK 431
+YEA+R+ F+D+ +S+ PL+L+ +TVHT CG+I ++F+KQ+ K+++ Y +
Sbjct: 350 VYEALRNCSFEDDNIRSLLKPLELELQKTVHTYCGKIYKIFIKQLAKSVRDRYAR 404
>gi|153791362 glycosyltransferase 8 domain containing 3 isoform 1
[Homo sapiens]
Length = 440
Score = 457 bits (1177), Expect = e-129
Identities = 209/322 (64%), Positives = 259/322 (80%), Gaps = 2/322 (0%)
Query: 110 IHLAVVACGNRLEETLVMLKSAVLFSHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFE 169
+HLAVVACG RLEET+ MLKSA++FS + +QFHIF ED L F +L W S+ + F
Sbjct: 116 MHLAVVACGERLEETMTMLKSAIIFSIKPLQFHIFAEDQLHHSFKGRLDNW--SFLQTFN 173
Query: 170 HRIYPITFSVGNPQEWKKLFKPCAAQRLFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLL 229
+ +YPITF N EWKKLFKPCA+QRLFLP+ILK+VDSLLYVDTD+LFLRPVDDIW LL
Sbjct: 174 YTLYPITFPSENAAEWKKLFKPCASQRLFLPLILKEVDSLLYVDTDILFLRPVDDIWSLL 233
Query: 230 RLFNSTQLAAMAPEHEIPKIGWYSRFARHPFYGSAGVNSGVMLMNLTRIRSTQFKNSMIP 289
+ FNSTQ+AAMAPEHE P+IGWY+RFARHP+YG GVNSGVMLMN+TR+R FKN M
Sbjct: 234 KKFNSTQIAAMAPEHEEPRIGWYNRFARHPYYGKTGVNSGVMLMNMTRMRRKYFKNDMTT 293
Query: 290 TGLAWEDMLYPLYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCR 349
L W D+L PL +KYK ITWGDQDLLNI+F+ NPE L+VFPCQWNYRPDHC+YGSNC+
Sbjct: 294 VRLQWGDILMPLLKKYKLNITWGDQDLLNIVFFHNPESLFVFPCQWNYRPDHCIYGSNCQ 353
Query: 350 EAEHEGVSVLHGNRGVYHDDKQPTFRALYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTL 409
EAE G+ +LHGNRGVYHDDKQP FRA+YEA+R+ F+D+ +S+ PL+L+ +TVHT
Sbjct: 354 EAEEGGIFILHGNRGVYHDDKQPAFRAVYEALRNCSFEDDNIRSLLKPLELELQKTVHTY 413
Query: 410 CGRIPQVFLKQIEKTMKRAYEK 431
CG+I ++F+KQ+ K+++ Y +
Sbjct: 414 CGKIYKIFIKQLAKSVRDRYAR 435
>gi|116235482 glycosyltransferase-like 1B [Homo sapiens]
Length = 721
Score = 76.3 bits (186), Expect = 5e-14
Identities = 94/378 (24%), Positives = 146/378 (38%), Gaps = 71/378 (18%)
Query: 7 AAALLLLALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGAL------ 60
AA LLLL L LL L R EP A AP P P+ R P G L
Sbjct: 13 AALLLLLLLLGFLLFGGDLGCERREPGGR----AGAPGCFPGPLMPRVPPDGRLRRAAAL 68
Query: 61 ---PGASPGVRRRRPPRPRPRAGRRGAARLEKLARRPGEPRSFQAVLPPELWIHLAVVAC 117
PGA PG R P+P P P+ EL +H+A+V
Sbjct: 69 DGDPGAGPGDHNRSDCGPQP----------------PPPPKC-------EL-LHVAIVCA 104
Query: 118 G-NRLEETLVMLKSAVLFSHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTK-KFEH--RIY 173
G N + + ++KS + + + H+ T+ + + W + F H ++
Sbjct: 105 GHNSSRDVITLVKSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLK 164
Query: 174 PITFSVGNPQEWKKLFKPCAAQRLFLPVILK-DVDSLLYVDTDVLFLRPVDDIWKLLRLF 232
P + N + + L+ +L LP L ++ ++ +DTDV F + ++W L F
Sbjct: 165 PQVSWIPN-KHYSGLY---GLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHF 220
Query: 233 NSTQLAAMAPEHEIPKIGWY--SRFARH---PFYGSAGVNSGVMLMNLTRIRSTQFKNSM 287
+ TQ + WY + + H P G G N+GV+L+ L R+R
Sbjct: 221 SDTQAIGLVENQS----DWYLGNLWKNHRPWPALG-RGFNTGVILLRLDRLRQA------ 269
Query: 288 IPTGLAWEDMLYPLYQK---YKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMY 344
WE M ++ A + DQD+ N + +P + PC WN +
Sbjct: 270 -----GWEQMWRLTARRELLSLPATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTL 324
Query: 345 GSNCREAEHEGVSVLHGN 362
C +E + V+H N
Sbjct: 325 AERC-YSEASDLKVIHWN 341
>gi|19924141 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 54.3 bits (129), Expect = 2e-07
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 28/263 (10%)
Query: 110 IHLAVVACGNRLEETLVMLKSAVLFSHRK-IQFHIFTEDSLKPEFDKQLRQWPDSYTKKF 168
IH+A+V G +V L +VLF R + FH+ + + + W +
Sbjct: 138 IHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVD 197
Query: 169 EHRIYPITFSVGNPQEWKKLFKPCAAQRLFLPVILK----DVDSLLYVDTDVLFLRPVDD 224
+ + V W L V+ K +++ ++ +DTD+ F + +
Sbjct: 198 FYNADELKSEVS----WIPNKHYSGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAE 253
Query: 225 IWKLLRLFNSTQLAAMAPEHEIPKIGWY--SRFARH---PFYGSAGVNSGVMLMNLTRIR 279
+W + F Q+ + WY + + H P G G N+GV+L+ L ++R
Sbjct: 254 LWAVFHKFKGQQVLGLVENQS----DWYLGNLWKNHRPWPALGR-GYNTGVILLLLDKLR 308
Query: 280 STQFKNSMIPTGLAWEDMLYPLYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRP 339
+++ T A +++ L + + DQD+ N + NP +Y PC WN +
Sbjct: 309 KMKWEQMWRLT--AERELMGML------STSLADQDIFNAVIKQNPFLVYQLPCFWNVQL 360
Query: 340 DHCMYGSNCREAEHEGVSVLHGN 362
C + + V+H N
Sbjct: 361 SDHTRSEQCYR-DVSDLKVIHWN 382
>gi|4758664 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 54.3 bits (129), Expect = 2e-07
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 28/263 (10%)
Query: 110 IHLAVVACGNRLEETLVMLKSAVLFSHRK-IQFHIFTEDSLKPEFDKQLRQWPDSYTKKF 168
IH+A+V G +V L +VLF R + FH+ + + + W +
Sbjct: 138 IHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVD 197
Query: 169 EHRIYPITFSVGNPQEWKKLFKPCAAQRLFLPVILK----DVDSLLYVDTDVLFLRPVDD 224
+ + V W L V+ K +++ ++ +DTD+ F + +
Sbjct: 198 FYNADELKSEVS----WIPNKHYSGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAE 253
Query: 225 IWKLLRLFNSTQLAAMAPEHEIPKIGWY--SRFARH---PFYGSAGVNSGVMLMNLTRIR 279
+W + F Q+ + WY + + H P G G N+GV+L+ L ++R
Sbjct: 254 LWAVFHKFKGQQVLGLVENQS----DWYLGNLWKNHRPWPALGR-GYNTGVILLLLDKLR 308
Query: 280 STQFKNSMIPTGLAWEDMLYPLYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRP 339
+++ T A +++ L + + DQD+ N + NP +Y PC WN +
Sbjct: 309 KMKWEQMWRLT--AERELMGML------STSLADQDIFNAVIKQNPFLVYQLPCFWNVQL 360
Query: 340 DHCMYGSNCREAEHEGVSVLHGN 362
C + + V+H N
Sbjct: 361 SDHTRSEQCYR-DVSDLKVIHWN 382
>gi|112181295 hypothetical protein LOC152002 [Homo sapiens]
Length = 393
Score = 45.8 bits (107), Expect = 8e-05
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 201 VILKDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAMAPE-------------HEIP 247
++ K++ ++ +D D+ F + ++++ F + +A E HE P
Sbjct: 214 IMPKEILQIIQLDLDLKFKTNIRELFEEFDSFLPGAIIGIAREMQPVYRHTFWQFRHENP 273
Query: 248 KIGWYSRFARHPFYGSAGVNSGVMLMNLTRIRSTQFKNSMIPTGLAWEDMLYPLYQKYKN 307
+ +R P G G NSGVML+NL +R + + ++ + L KY
Sbjct: 274 Q----TRVGGPPPEGLPGFNSGVMLLNLEAMRQSPLYSRLLEPA-----QVQQLADKYHF 324
Query: 308 AITWGDQDLLNIIFYFNPECLYVFPCQWN 336
GDQD +I +P+ +V C WN
Sbjct: 325 RGHLGDQDFFTMIGMEHPKLFHVLDCTWN 353
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 41.2 bits (95), Expect = 0.002
Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 32 PPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRPRAGRRGAAR-LEKL 90
PP PA P P P P PA PGPG P P PP G RG R +
Sbjct: 24 PPPPPAPPQQQPP--PPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDSS 81
Query: 91 ARRPGEP 97
RPG P
Sbjct: 82 CGRPGTP 88
Score = 28.9 bits (63), Expect = 9.8
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 21 ALLSLRAGRAEPPALPARPASAP---QRHPA----PVPARWPGPGALPGASPGVRRRRPP 73
A L R G PP P + SA Q+ A P AR P G L SP + RR PP
Sbjct: 705 AELGQRVGLFPPPPPPPQVTSAIATLQQAAAMSFCPQVAR-PLVGPLALGSPRLVRRPPP 763
Query: 74 RPRPRAGRRGAARLEKLARRPGEPRS 99
P P A G P PR+
Sbjct: 764 GPAPAAASPGPPPPASPPGAPASPRA 789
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 41.2 bits (95), Expect = 0.002
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 28 GRAEPPALPAR----PASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRPRAGRRG 83
G +PP+ PA PA+ R A P PGPG PG PG RR P +R
Sbjct: 32 GAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPGPGSTSRRLDPKEPLGNQRA 91
Query: 84 AARLEK--LARRPG--EPRSFQAVLP 105
A+ K A PG PR +A P
Sbjct: 92 ASPTPKQASATTPGHESPRETRAQGP 117
Score = 31.6 bits (70), Expect = 1.5
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 24 SLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRPRAGRRG 83
+L R + + P SAP A PA P PG P + G + PPR G +G
Sbjct: 3793 ALTQARLQQQSQPTTRGSAPA---ASQPAGKPQPG--PSTATGPQPAGPPRAEQTNGSKG 3847
Query: 84 AARLEKLARRP 94
A+ + R P
Sbjct: 3848 TAKAPQQGRAP 3858
Score = 31.2 bits (69), Expect = 2.0
Identities = 22/76 (28%), Positives = 28/76 (36%)
Query: 30 AEPPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRPRAGRRGAARLEK 89
A A P S P PAP PG PG+ PG + P+ GR K
Sbjct: 391 ASKEAGPKPLGSGPGPGPAPGAKTEPGARMGPGSGPGALPKTGGTTSPKHGRAEHQAASK 450
Query: 90 LARRPGEPRSFQAVLP 105
A +P +A+ P
Sbjct: 451 AAAKPKTMPKERAICP 466
Score = 29.6 bits (65), Expect = 5.7
Identities = 26/90 (28%), Positives = 30/90 (33%), Gaps = 6/90 (6%)
Query: 23 LSLRAGRAEPPALPARPASAPQRHPAPVPARWP----GPGALPGASPGVRRRRPPRPRPR 78
+SL G + P P P P P + P G G LP A PP P P
Sbjct: 5 VSLEGGAGDGPLPPGGAGPGPGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPG 64
Query: 79 AGRRGAARLEKLARR--PGEPRSFQAVLPP 106
G +RR P EP Q P
Sbjct: 65 PGPGPGPGPGSTSRRLDPKEPLGNQRAASP 94
>gi|116734689 socius isoform 3 [Homo sapiens]
Length = 400
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 10 LLLLALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRR 69
L L A + A L LRA RA +L P P P P P PGPG PG PG
Sbjct: 334 LTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPG--PGPGPSPGPGPGPSP 391
Query: 70 RRPPRPRPR 78
P P P+
Sbjct: 392 CPGPSPSPQ 400
>gi|116734681 socius isoform 1 [Homo sapiens]
Length = 487
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 10 LLLLALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRR 69
L L A + A L LRA RA +L P P P P P PGPG PG PG
Sbjct: 421 LTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPG--PGPGPSPGPGPGPSP 478
Query: 70 RRPPRPRPR 78
P P P+
Sbjct: 479 CPGPSPSPQ 487
>gi|116734679 socius isoform 2 [Homo sapiens]
Length = 520
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 10 LLLLALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRR 69
L L A + A L LRA RA +L P P P P P PGPG PG PG
Sbjct: 454 LTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPG--PGPGPSPGPGPGPSP 511
Query: 70 RRPPRPRPR 78
P P P+
Sbjct: 512 CPGPSPSPQ 520
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/88 (35%), Positives = 34/88 (38%), Gaps = 11/88 (12%)
Query: 30 AEPPALPARPASAP----QRHPAPVPARWPGPGALPGASPGVRRR-------RPPRPRPR 78
A PPA P P AP P P PA P P + A+P R PP P P
Sbjct: 106 ATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPA 165
Query: 79 AGRRGAARLEKLARRPGEPRSFQAVLPP 106
A R LA P P + AV PP
Sbjct: 166 QPGPRAQRAAPLAAPPPAPAAPPAVAPP 193
Score = 38.5 bits (88), Expect = 0.012
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 30 AEPPALPARPASAPQRHPAPVPARWPGPGA---LPGASPGVRRRRPPRPRPRAGRRGAAR 86
A P P A+A P+P PA+ PGP A P A+P PP P AG R A
Sbjct: 143 AAPARAPRAAAAAATAPPSPGPAQ-PGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPP 201
Query: 87 LEKLARRPGEPRSFQAVLPPE 107
AR P P Q PP+
Sbjct: 202 PAVAAREPPLPPPPQPPAPPQ 222
Score = 35.4 bits (80), Expect = 0.10
Identities = 29/80 (36%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
Query: 27 AGRAEPPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRPRAGRRGAAR 86
A A P PA+P QR AP+ A P P A P +P RR P P AAR
Sbjct: 155 AATAPPSPGPAQPGPRAQR-AAPLAAPPPAPAAPPAVAPPAGPRRAPPPAV------AAR 207
Query: 87 LEKLARRPGEPRSFQAVLPP 106
L P P Q PP
Sbjct: 208 EPPLPPPPQPPAPPQQQQPP 227
Score = 34.3 bits (77), Expect = 0.23
Identities = 24/64 (37%), Positives = 26/64 (40%)
Query: 14 ALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPP 73
A AA A S + P A A P +AP PA PA P G P V R PP
Sbjct: 151 AAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPP 210
Query: 74 RPRP 77
P P
Sbjct: 211 LPPP 214
Score = 33.1 bits (74), Expect = 0.52
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 30 AEPPALPARPASAP----QRHPAP-VPARWPG--PGALPGASPGVRRRRPPRPRPRAGRR 82
A PPA A PA AP +R P P V AR P P P A P ++++PP P+P+
Sbjct: 179 APPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPP--QQQQPPPPQPQPPPE 236
Query: 83 GAARLEKLARRP 94
G A A RP
Sbjct: 237 GGAVRAGGAARP 248
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 40.4 bits (93), Expect = 0.003
Identities = 29/71 (40%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 29 RAEPPALPARPASAPQRHPAPVPARWPGPGALPGAS--PGVRRR--RPPRPRPRAGRRGA 84
+++PP A APQ P PAR PG GAS P +R R RPP P P G
Sbjct: 195 KSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPP-PAPGPGALSR 253
Query: 85 ARLEKLARRPG 95
A + A RPG
Sbjct: 254 ASRSRAAGRPG 264
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 40.4 bits (93), Expect = 0.003
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 9 ALLLLALAALLLALLSLRA-GRAEPPALPARPASAPQRHPAPVPARWPGPG--ALPGASP 65
+LL +AA ++SL A G+ PP P P S+P++ PAP PAR G SP
Sbjct: 133 SLLPAQVAACAQTVVSLAAAGQPTPPTSPEPPRSSPRQTPAPGPAREKSAGKRGPDRGSP 192
Query: 66 GVRRRRP------PRPRPRAGRRGAARLEKLARRPGE 96
R+RR + R +A RR +KL E
Sbjct: 193 EYRQRRERNNIAVRKSRDKAKRRNQEMQQKLVELSAE 229
>gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3
[Homo sapiens]
Length = 471
Score = 40.0 bits (92), Expect = 0.004
Identities = 30/75 (40%), Positives = 33/75 (44%), Gaps = 19/75 (25%)
Query: 26 RAGRAEPPALP--ARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRPRAGRRG 83
RAG A PPA+P AR A AP P W LP PP P G RG
Sbjct: 42 RAGEAGPPAVPGPARRAQAP-------PEEWERRPQLP----------PPPRGPPEGPRG 84
Query: 84 AARLEKLARRPGEPR 98
AA E+ PG+PR
Sbjct: 85 AAAPEEEDEEPGDPR 99
>gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens]
Length = 471
Score = 40.0 bits (92), Expect = 0.004
Identities = 30/75 (40%), Positives = 33/75 (44%), Gaps = 19/75 (25%)
Query: 26 RAGRAEPPALP--ARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRPRAGRRG 83
RAG A PPA+P AR A AP P W LP PP P G RG
Sbjct: 42 RAGEAGPPAVPGPARRAQAP-------PEEWERRPQLP----------PPPRGPPEGPRG 84
Query: 84 AARLEKLARRPGEPR 98
AA E+ PG+PR
Sbjct: 85 AAAPEEEDEEPGDPR 99
>gi|8922785 hypothetical protein LOC55267 [Homo sapiens]
Length = 138
Score = 38.9 bits (89), Expect = 0.009
Identities = 38/118 (32%), Positives = 40/118 (33%), Gaps = 35/118 (29%)
Query: 27 AGRAEPPALPARPASAPQRHPAPVPARWPGPGA--------------------LPGA--- 63
A P LP PASAP P P PGPG PG+
Sbjct: 8 AWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWAPGSWPR 67
Query: 64 ------SPGVRRRRPPRPRPRAGRRGAARLEKLARRPGEP----RSFQAVLPPELWIH 111
SPG R P P P A R R AR PG P R+FQ L W H
Sbjct: 68 VLLVPRSPGPVLRAPRLPHPAA--RARRRAWHGARLPGSPARAGRTFQRGLVSNSWAH 123
>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 38.5 bits (88), Expect = 0.012
Identities = 28/67 (41%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 32 PPALPARPAS-APQRHPAPVPARWP--GPGALPGASPGVRRRRPPRPRPRAGRRGAARLE 88
PP PA PA+ + Q P P PAR P PGA A P R P P P R G A
Sbjct: 180 PPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTG 239
Query: 89 KLARRPG 95
A PG
Sbjct: 240 LAAPSPG 246
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 38.5 bits (88), Expect = 0.012
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 35 LPARPASAPQRHPAPVPARWPGPGALPGASPGVRRRR-----PPRPR----PRAGRRGAA 85
LP+ P PAP PA P P P + + R PPRP R+ AA
Sbjct: 499 LPSTAVPTPATTPAPAPA--PAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAA 556
Query: 86 RLEKLARRPGEPRSFQAVLPP 106
+E +ARR P + +PP
Sbjct: 557 PVEDMARRTKRPAPARPTMPP 577
Score = 34.7 bits (78), Expect = 0.18
Identities = 24/90 (26%), Positives = 31/90 (34%)
Query: 29 RAEPPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRPRAGRRGAARLE 88
R+ PPA P P S P +P R G P PP+P R RR A
Sbjct: 584 RSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPS 643
Query: 89 KLARRPGEPRSFQAVLPPELWIHLAVVACG 118
+ P P P ++ + A G
Sbjct: 644 PASPGPASPSPVSLSNPAQVDLGAATAEGG 673
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 38.1 bits (87), Expect = 0.016
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 25/108 (23%)
Query: 16 AALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGALPGAS------PGVRR 69
AAL A S A P PA P +AP +P R +PGA PG
Sbjct: 318 AALSRAWASSWESEAAPE--PAAPPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAA 375
Query: 70 RR--------------PPRPRPR-AGRRGAARLEKLARRPGEPRSFQA 102
RR PPR RPR AGRRG R+ + + R G PR+ +A
Sbjct: 376 RRKPPPLTRGRSVEQSPPRERPRAAGRRG--RMAEASGRRGSPRARKA 421
>gi|27734829 hypothetical protein LOC256329 [Homo sapiens]
Length = 634
Score = 38.1 bits (87), Expect = 0.016
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 1 MKLRSKAAALLLLALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPA---RWPGP 57
++ S + LL++ LLS + +P R AP+ R+P
Sbjct: 432 LRASSSREPVPLLSIRGCATLLLSPKGEVLSEHRIPRRETPAPRVFADGTDLSIDRFP-- 489
Query: 58 GALPGASPGVRRRRPPRPRPRAGRRGAARLEKLA-RRPGEPRSFQAVLPP 106
LP A PG R+PPRP PR R+G R +++ RRPG + +LPP
Sbjct: 490 --LPEAGPGADTRKPPRP-PRPLRKGRVREPRVSRRRPGT----RGLLPP 532
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 37.4 bits (85), Expect = 0.028
Identities = 34/87 (39%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPAR----W---PGP----GALPGASP 65
AL ++ S G AEPPAL PAS P R +P P R W PGP G P P
Sbjct: 75 ALWISTSSAGTGGAEPPALSPAPAS-PARPVSPAPGRRLSLWAVPPGPPLSGGLSPDPKP 133
Query: 66 G---VRRRRP---------PRPRPRAG 80
G RRP P P RAG
Sbjct: 134 GGAPTSSRRPLLSSPSWGGPEPEGRAG 160
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 37.4 bits (85), Expect = 0.028
Identities = 39/140 (27%), Positives = 52/140 (37%), Gaps = 24/140 (17%)
Query: 32 PPALPARPASAPQR----HPAPVP-----ARWPGPGALPGASPGVRRRRPPRPRPRAGRR 82
PP LP P AP HP P P A+ P P P SP P P A
Sbjct: 786 PPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASP 845
Query: 83 GAARLEKLARRPGEPRSF------QAVLPPELWIHLAVVACGNRLEETLVMLKSAVLFSH 136
G L + SF + PP L +VV+ G+ LE +L M+ F
Sbjct: 846 GPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEASLPMIS----FKQ 901
Query: 137 RKIQFHIFTEDSLKPEFDKQ 156
+++ + LKP + Q
Sbjct: 902 EELE-----NEGLKPREEPQ 916
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 37.4 bits (85), Expect = 0.028
Identities = 39/140 (27%), Positives = 52/140 (37%), Gaps = 24/140 (17%)
Query: 32 PPALPARPASAPQR----HPAPVP-----ARWPGPGALPGASPGVRRRRPPRPRPRAGRR 82
PP LP P AP HP P P A+ P P P SP P P A
Sbjct: 987 PPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASP 1046
Query: 83 GAARLEKLARRPGEPRSF------QAVLPPELWIHLAVVACGNRLEETLVMLKSAVLFSH 136
G L + SF + PP L +VV+ G+ LE +L M+ F
Sbjct: 1047 GPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEASLPMIS----FKQ 1102
Query: 137 RKIQFHIFTEDSLKPEFDKQ 156
+++ + LKP + Q
Sbjct: 1103 EELE-----NEGLKPREEPQ 1117
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 37.4 bits (85), Expect = 0.028
Identities = 39/140 (27%), Positives = 52/140 (37%), Gaps = 24/140 (17%)
Query: 32 PPALPARPASAPQR----HPAPVP-----ARWPGPGALPGASPGVRRRRPPRPRPRAGRR 82
PP LP P AP HP P P A+ P P P SP P P A
Sbjct: 987 PPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASP 1046
Query: 83 GAARLEKLARRPGEPRSF------QAVLPPELWIHLAVVACGNRLEETLVMLKSAVLFSH 136
G L + SF + PP L +VV+ G+ LE +L M+ F
Sbjct: 1047 GPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEASLPMIS----FKQ 1102
Query: 137 RKIQFHIFTEDSLKPEFDKQ 156
+++ + LKP + Q
Sbjct: 1103 EELE-----NEGLKPREEPQ 1117
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 37.4 bits (85), Expect = 0.028
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 13 LALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGALP 61
L L ++ A R RA+P A P PA+ P PAP A+ P P ALP
Sbjct: 33 LTLHSVFSASARGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPEALP 81
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 37.4 bits (85), Expect = 0.028
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 13 LALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGALP 61
L L ++ A R RA+P A P PA+ P PAP A+ P P ALP
Sbjct: 33 LTLHSVFSASARGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPEALP 81
>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 492
Score = 37.0 bits (84), Expect = 0.036
Identities = 33/103 (32%), Positives = 40/103 (38%), Gaps = 23/103 (22%)
Query: 24 SLRAGRAEP-------PALPARPASAPQRHPAPVP--------ARWPGPGALPGASPGV- 67
+L+A A P PAL P P R P P P W P P A+PG
Sbjct: 361 ALKAAEAAPRDFCQRFPALEPSPRQPPARAPRPSPDLPAPLDACPWAPPVYAPPAAPGPY 420
Query: 68 ---RRRRPPRPRPRAGRRGAARLEKLARRPGEP--RSFQAVLP 105
RP RP P + AR ++ RRPG R F +P
Sbjct: 421 AAWTSSRPARPAPLS--HPTARAFQVPRRPGHAARRQFSVKMP 461
Score = 32.3 bits (72), Expect = 0.89
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 26 RAGRAEPPALPARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRPRAGRRGAA 85
R RA PP P AP A AR PG +PGA R +PRP G G+
Sbjct: 227 RLARASPPGEPFMRV-APPGLAAAAAARDSEPGPVPGAGGCGEDRLGSQPRPENGPPGSH 285
Query: 86 R 86
R
Sbjct: 286 R 286
>gi|208431817 protein kinase-like protein SgK493 [Homo sapiens]
Length = 493
Score = 37.0 bits (84), Expect = 0.036
Identities = 38/103 (36%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 3 LRSKAAALLLLALAALLLA--LLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGAL 60
+R + AA+ A+ LL L L A +EPP RP +P+ PAP P R G G L
Sbjct: 1 MRRRRAAVAAGFCASFLLGSVLNVLFAPGSEPP----RPGQSPEPSPAPGPGRRGGRGEL 56
Query: 61 P----GASPGVRRRRPPRPRPRAGRRGAARLEKLA-RRPGEPR 98
V+R P P AGR RL LA PG PR
Sbjct: 57 ARQIRARYEEVQRYSRGGPGPGAGRPERRRLMDLAPGGPGLPR 99
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.140 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,201,278
Number of Sequences: 37866
Number of extensions: 1079258
Number of successful extensions: 12516
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 736
Number of HSP's that attempted gapping in prelim test: 9084
Number of HSP's gapped (non-prelim): 3390
length of query: 443
length of database: 18,247,518
effective HSP length: 105
effective length of query: 338
effective length of database: 14,271,588
effective search space: 4823796744
effective search space used: 4823796744
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.