Guide to the Human Genome
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Search of human proteins with 28605145

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|28605145 glutamate receptor, ionotropic, kainate 3 precursor
[Homo sapiens]
         (919 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|28605145 glutamate receptor, ionotropic, kainate 3 precursor ...  1863   0.0  
gi|11386137 glutamate receptor, ionotropic, kainate 2 isoform 1 ...  1483   0.0  
gi|28559003 glutamate receptor, ionotropic, kainate 2 isoform 2 ...  1399   0.0  
gi|28416444 glutamate receptor, ionotropic, kainate 1 isoform 2 ...  1358   0.0  
gi|4504117 glutamate receptor, ionotropic, kainate 1 isoform 1 p...  1337   0.0  
gi|29029597 glutamate receptor KA2 precursor [Homo sapiens]           709   0.0  
gi|29029595 glutamate receptor KA1 precursor [Homo sapiens]           680   0.0  
gi|167001419 glutamate receptor, ionotropic, AMPA 1 isoform 1 [H...   606   e-173
gi|167001484 glutamate receptor, ionotropic, AMPA 1 isoform 2 [H...   604   e-172
gi|134304848 glutamate receptor, ionotropic, AMPA 2 isoform 2 pr...   595   e-170
gi|134304851 glutamate receptor, ionotropic, AMPA 2 isoform 3 [H...   594   e-169
gi|74275354 glutamate receptor, ionotropic, AMPA 2 isoform 1 pre...   594   e-169
gi|164419734 glutamate receptor, ionotrophic, AMPA 4 isoform 1 p...   590   e-168
gi|163659858 glutamate receptor, ionotrophic, AMPA 3 isoform 2 p...   587   e-167
gi|164419736 glutamate receptor, ionotrophic, AMPA 4 isoform 2 p...   585   e-167
gi|163659856 glutamate receptor, ionotrophic, AMPA 3 isoform 1 p...   584   e-166
gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [H...   360   3e-99
gi|157384977 glutamate receptor, ionotropic, delta 2 [Homo sapiens]   345   9e-95
gi|11038637 NMDA receptor 1 isoform NR1-3 precursor [Homo sapiens]    248   2e-65
gi|11496971 NMDA receptor 1 isoform NR1-1 precursor [Homo sapiens]    244   3e-64
gi|11038635 NMDA receptor 1 isoform NR1-2 precursor [Homo sapiens]    244   3e-64
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ...   185   2e-46
gi|197313638 N-methyl-D-aspartate receptor subunit 2A isoform 2 ...   183   7e-46
gi|197313636 N-methyl-D-aspartate receptor subunit 2A isoform 1 ...   183   7e-46
gi|4504125 N-methyl-D-aspartate receptor subunit 2A isoform 1 pr...   183   7e-46
gi|167003331 N-methyl-D-aspartate receptor subunit 2B precursor ...   181   2e-45
gi|55770854 N-methyl-D-aspartate receptor subunit 2C precursor [...   172   2e-42
gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate...   154   4e-37
gi|223278356 glutamate receptor, ionotropic, N-methyl-D-aspartat...   153   6e-37
gi|116284390 glutamate receptor, ionotrophic, AMPA 4 isoform 3 p...   151   3e-36

>gi|28605145 glutamate receptor, ionotropic, kainate 3 precursor
           [Homo sapiens]
          Length = 919

 Score = 1863 bits (4827), Expect = 0.0
 Identities = 919/919 (100%), Positives = 919/919 (100%)

Query: 1   MTAPWRRLRSLVWEYWAGLLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAF 60
           MTAPWRRLRSLVWEYWAGLLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAF
Sbjct: 1   MTAPWRRLRSLVWEYWAGLLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAF 60

Query: 61  RFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNA 120
           RFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNA
Sbjct: 61  RFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNA 120

Query: 121 VQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYD 180
           VQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYD
Sbjct: 121 VQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYD 180

Query: 181 DSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQ 240
           DSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQ
Sbjct: 181 DSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQ 240

Query: 241 ILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWS 300
           ILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWS
Sbjct: 241 ILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWS 300

Query: 301 MERLQAAPRSESGLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGG 360
           MERLQAAPRSESGLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGG
Sbjct: 301 MERLQAAPRSESGLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGG 360

Query: 361 RFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVA 420
           RFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVA
Sbjct: 361 RFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVA 420

Query: 421 KGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFS 480
           KGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFS
Sbjct: 421 KGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFS 480

Query: 481 YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV 540
           YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV
Sbjct: 481 YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV 540

Query: 541 SILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG 600
           SILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG
Sbjct: 541 SILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG 600

Query: 601 SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF 660
           SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF
Sbjct: 601 SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF 660

Query: 661 LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVK 720
           LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVK
Sbjct: 661 LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVK 720

Query: 721 NNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKIT 780
           NNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKIT
Sbjct: 721 NNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKIT 780

Query: 781 IAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAV 840
           IAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAV
Sbjct: 781 IAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAV 840

Query: 841 GEFVYKLRKTAEREQRSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTDAVINMHTFNDR 900
           GEFVYKLRKTAEREQRSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTDAVINMHTFNDR
Sbjct: 841 GEFVYKLRKTAEREQRSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTDAVINMHTFNDR 900

Query: 901 RLPGKDSMACSTSLAPVFP 919
           RLPGKDSMACSTSLAPVFP
Sbjct: 901 RLPGKDSMACSTSLAPVFP 919


>gi|11386137 glutamate receptor, ionotropic, kainate 2 isoform 1
           precursor [Homo sapiens]
          Length = 908

 Score = 1483 bits (3840), Expect = 0.0
 Identities = 719/894 (80%), Positives = 808/894 (90%), Gaps = 7/894 (0%)

Query: 19  LLVCAFWIPDSRGMPHVIRIGGIFEYAD-GPNAQVMNAEEHAFRFSANIINRNRTLLPNT 77
           LL+C  WI  S+G  HV+R GGIFEY + GP    M AEE AFRF+ N INRNRTLLPNT
Sbjct: 19  LLLCLLWIGYSQGTTHVLRFGGIFEYVESGP----MGAEELAFRFAVNTINRNRTLLPNT 74

Query: 78  TLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW 137
           TLTYD Q+I+ +DSFEA+KKACDQL+LGV AIFGPS  S  NAVQSICNAL VPHIQ RW
Sbjct: 75  TLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW 134

Query: 138 KHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSR 197
           KH   DNKD+FYV+LYPD++SLS AILDLVQ+ KW++ TVVYDDSTGLIRLQELI APSR
Sbjct: 135 KHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSR 194

Query: 198 YNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHF 257
           YN+RLKIRQLP D+ D++PLLKEMKRG+EF +IFDCSH MAA ILKQA+AMGMMTEYYH+
Sbjct: 195 YNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHY 254

Query: 258 IFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDG 317
           IFTTLDL+ALD+EPYRYSGVN+TGFRILN +N  VS+I+EKWSMERLQA P+ +SGLLDG
Sbjct: 255 IFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDG 314

Query: 318 VMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGR 377
            M TDAAL+YDAVH+VSV  Q+ PQMTV+SLQC+RHK WRFG RFM+ IKEA WEGLTGR
Sbjct: 315 FMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGR 374

Query: 378 IVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLI 437
           I FNKT+GLRTDFDLD+ISLKE+GLEK+G W PA GLN+TE  KG+  N+TDSL+NRSLI
Sbjct: 375 ITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI 434

Query: 438 VTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD- 496
           VTT+LEEP+V+F+KSD+ LYGNDRFEGYCIDLL+EL+ ILGF+YEIRLVEDGKYGAQDD 
Sbjct: 435 VTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDA 494

Query: 497 KGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFS 556
            GQWNGMV+ELIDHKADLAVAPL IT+VREK IDFSKPFMTLG+SILYRKPNGTNP VFS
Sbjct: 495 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 554

Query: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 616
           FLNPLSPDIWMY+LLAYLGVSCVLFVIARFSPYEWY+ HPCNP S+VVENNFTLLNSFWF
Sbjct: 555 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614

Query: 617 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
           G+G+LMQQGSELMPKALSTRI+GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674

Query: 677 AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSS-KPSALVKNNEEGIQRALTADYA 735
           AKQTKIEYGAV+DGATMTFFKKSKIST++KMWAFMSS + S LVK+NEEGIQR LT+DYA
Sbjct: 675 AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYA 734

Query: 736 LLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIM 795
            LMESTTIE+VTQRNCNLTQIGGLIDSKGYG+GTPMGSPYRDKITIAILQLQEE KLH+M
Sbjct: 735 FLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMM 794

Query: 796 KEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAEREQ 855
           KEKWWRG+GCPEEE+KEASALG+Q IGGIFIVLAAGLVLSV VAVGEF+YK +K A+ E+
Sbjct: 795 KEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEK 854

Query: 856 RSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTDAVINMHTFNDRRLPGKDSMA 909
           RSFCS + +E+R SL CQRR+KHKPQ P++VKT+ VINMHTFNDRRLPGK++MA
Sbjct: 855 RSFCSAMVEELRMSLKCQRRLKHKPQAPVIVKTEEVINMHTFNDRRLPGKETMA 908


>gi|28559003 glutamate receptor, ionotropic, kainate 2 isoform 2
           precursor [Homo sapiens]
          Length = 869

 Score = 1399 bits (3622), Expect = 0.0
 Identities = 681/842 (80%), Positives = 761/842 (90%), Gaps = 7/842 (0%)

Query: 19  LLVCAFWIPDSRGMPHVIRIGGIFEYAD-GPNAQVMNAEEHAFRFSANIINRNRTLLPNT 77
           LL+C  WI  S+G  HV+R GGIFEY + GP    M AEE AFRF+ N INRNRTLLPNT
Sbjct: 19  LLLCLLWIGYSQGTTHVLRFGGIFEYVESGP----MGAEELAFRFAVNTINRNRTLLPNT 74

Query: 78  TLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW 137
           TLTYD Q+I+ +DSFEA+KKACDQL+LGV AIFGPS  S  NAVQSICNAL VPHIQ RW
Sbjct: 75  TLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW 134

Query: 138 KHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSR 197
           KH   DNKD+FYV+LYPD++SLS AILDLVQ+ KW++ TVVYDDSTGLIRLQELI APSR
Sbjct: 135 KHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSR 194

Query: 198 YNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHF 257
           YN+RLKIRQLP D+ D++PLLKEMKRG+EF +IFDCSH MAA ILKQA+AMGMMTEYYH+
Sbjct: 195 YNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHY 254

Query: 258 IFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDG 317
           IFTTLDL+ALD+EPYRYSGVN+TGFRILN +N  VS+I+EKWSMERLQA P+ +SGLLDG
Sbjct: 255 IFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDG 314

Query: 318 VMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGR 377
            M TDAAL+YDAVH+VSV  Q+ PQMTV+SLQC+RHK WRFG RFM+ IKEA WEGLTGR
Sbjct: 315 FMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGR 374

Query: 378 IVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLI 437
           I FNKT+GLRTDFDLD+ISLKE+GLEK+G W PA GLN+TE  KG+  N+TDSL+NRSLI
Sbjct: 375 ITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI 434

Query: 438 VTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD- 496
           VTT+LEEP+V+F+KSD+ LYGNDRFEGYCIDLL+EL+ ILGF+YEIRLVEDGKYGAQDD 
Sbjct: 435 VTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDA 494

Query: 497 KGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFS 556
            GQWNGMV+ELIDHKADLAVAPL IT+VREK IDFSKPFMTLG+SILYRKPNGTNP VFS
Sbjct: 495 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 554

Query: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 616
           FLNPLSPDIWMY+LLAYLGVSCVLFVIARFSPYEWY+ HPCNP S+VVENNFTLLNSFWF
Sbjct: 555 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614

Query: 617 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
           G+G+LMQQGSELMPKALSTRI+GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674

Query: 677 AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSS-KPSALVKNNEEGIQRALTADYA 735
           AKQTKIEYGAV+DGATMTFFKKSKIST++KMWAFMSS + S LVK+NEEGIQR LT+DYA
Sbjct: 675 AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYA 734

Query: 736 LLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIM 795
            LMESTTIE+VTQRNCNLTQIGGLIDSKGYG+GTPMGSPYRDKITIAILQLQEE KLH+M
Sbjct: 735 FLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMM 794

Query: 796 KEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAEREQ 855
           KEKWWRG+GCPEEE+KEASALG+Q IGGIFIVLAAGLVLSV VAVGEF+YK +K A+ E+
Sbjct: 795 KEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEK 854

Query: 856 RS 857
            S
Sbjct: 855 ES 856


>gi|28416444 glutamate receptor, ionotropic, kainate 1 isoform 2
           precursor [Homo sapiens]
          Length = 905

 Score = 1358 bits (3516), Expect = 0.0
 Identities = 657/895 (73%), Positives = 773/895 (86%), Gaps = 9/895 (1%)

Query: 16  WAGLLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLP 75
           WA L    + +P +   P V+RIGGIFE  +    + +N EE AF+F+   INRNRTL+P
Sbjct: 19  WALLYFLCYILPQTA--PQVLRIGGIFETVEN---EPVNVEELAFKFAVTSINRNRTLMP 73

Query: 76  NTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQL 135
           NTTLTYDIQRI+  DSFEA+++ACDQLALGV A+FGPS  S  +AVQSICNALEVPHIQ 
Sbjct: 74  NTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQT 133

Query: 136 RWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAP 195
           RWKH  +DNKD FY+NLYPDYA++S AILDLV Y  W++ TVVY+DSTGLIRLQELI AP
Sbjct: 134 RWKHPSVDNKDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAP 193

Query: 196 SRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYY 255
           SRYNI++KIRQLP  + D++PLLKEMK+G+EF +IFDCSH  AA+ILKQ + MGMMTEYY
Sbjct: 194 SRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYY 253

Query: 256 HFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLL 315
           H+ FTTLDL+ALDLE YRYSGVN+TGFR+LN+DNPHVS+I+EKWSMERLQA PR E+GLL
Sbjct: 254 HYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLL 313

Query: 316 DGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 375
           DG+M T+AAL+YDAV++V++   RA Q+TV+SLQCHRHK WR G RFMN IKEA+W+GLT
Sbjct: 314 DGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLT 373

Query: 376 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRS 435
           G I FNKT+GLR DFDLDIISLKE+G EK+G+W+   GLN+T+  K +  N+TDSL NR+
Sbjct: 374 GHITFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRT 433

Query: 436 LIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQD 495
           LIVTT+LEEP+VM+RKSD+ LYGNDRFEGYC+DLLKEL++ILGF Y+++LV DGKYGAQ+
Sbjct: 434 LIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQN 493

Query: 496 DKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVF 555
           DKG+WNGMVKELIDH+ADLAVAPLTIT+VREK IDFSKPFMTLG+SILYRKPNGTNP VF
Sbjct: 494 DKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVF 553

Query: 556 SFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFW 615
           SFLNPLSPDIWMYVLLA LGVSCVLFVIARF+PYEWY+ HPCNP S+VVENNFTLLNSFW
Sbjct: 554 SFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFW 613

Query: 616 FGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD 675
           FG+G+LMQQGSELMPKALSTRI+GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD
Sbjct: 614 FGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD 673

Query: 676 LAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSK-PSALVKNNEEGIQRALTADY 734
           LAKQTKIEYGAV+DG+TMTFFKKSKIST+EKMWAFMSS+  +ALV+N++EGIQR LT DY
Sbjct: 674 LAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTDY 733

Query: 735 ALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI 794
           ALLMEST+IEYVTQRNCNLTQIGGLIDSKGYG+GTP+GSPYRDKITIAILQLQEE KLH+
Sbjct: 734 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 793

Query: 795 MKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAERE 854
           MKEKWWRG+GCPEE+NKEASALG++ IGGIFIVLAAGLVLSV VA+GEF+YK RK  + E
Sbjct: 794 MKEKWWRGNGCPEEDNKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNNDIE 853

Query: 855 QRSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTDAVINMHTFNDRRLPGKDSMA 909
           Q    + + +E+  SL  Q+++K K +        +++  H    RR   K+++A
Sbjct: 854 QCLSFNAIMEELGISLKNQKKIKKKSRTKGKSSFTSILTCH---QRRTQRKETVA 905


>gi|4504117 glutamate receptor, ionotropic, kainate 1 isoform 1
           precursor [Homo sapiens]
          Length = 918

 Score = 1337 bits (3461), Expect = 0.0
 Identities = 648/860 (75%), Positives = 751/860 (87%), Gaps = 22/860 (2%)

Query: 16  WAGLLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLP 75
           WA L    + +P +   P V+RIGGIFE  +    + +N EE AF+F+   INRNRTL+P
Sbjct: 19  WALLYFLCYILPQTA--PQVLRIGGIFETVEN---EPVNVEELAFKFAVTSINRNRTLMP 73

Query: 76  NTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQL 135
           NTTLTYDIQRI+  DSFEA+++ACDQLALGV A+FGPS  S  +AVQSICNALEVPHIQ 
Sbjct: 74  NTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQT 133

Query: 136 RWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAP 195
           RWKH  +DNKD FY+NLYPDYA++S AILDLV Y  W++ TVVY+DSTGLIRLQELI AP
Sbjct: 134 RWKHPSVDNKDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAP 193

Query: 196 SRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYY 255
           SRYNI++KIRQLP  + D++PLLKEMK+G+EF +IFDCSH  AA+ILKQ + MGMMTEYY
Sbjct: 194 SRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYY 253

Query: 256 HFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLL 315
           H+ FTTLDL+ALDLE YRYSGVN+TGFR+LN+DNPHVS+I+EKWSMERLQA PR E+GLL
Sbjct: 254 HYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLL 313

Query: 316 DGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 375
           DG+M T+AAL+YDAV++V++   RA Q+TV+SLQCHRHK WR G RFMN IKEA+W+GLT
Sbjct: 314 DGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLT 373

Query: 376 GRIVFNKTSGLRTDFDLDIISLKEDGLEK---------------VGVWSPADGLNITEVA 420
           G I FNKT+GLR DFDLDIISLKE+G EK               +G+W+   GLN+T+  
Sbjct: 374 GHITFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSN 433

Query: 421 KGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFS 480
           K +  N+TDSL NR+LIVTT+LEEP+VM+RKSD+ LYGNDRFEGYC+DLLKEL++ILGF 
Sbjct: 434 KDKSSNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFI 493

Query: 481 YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV 540
           Y+++LV DGKYGAQ+DKG+WNGMVKELIDH+ADLAVAPLTIT+VREK IDFSKPFMTLG+
Sbjct: 494 YDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGI 553

Query: 541 SILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG 600
           SILYRKPNGTNP VFSFLNPLSPDIWMYVLLA LGVSCVLFVIARF+PYEWY+ HPCNP 
Sbjct: 554 SILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPD 613

Query: 601 SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF 660
           S+VVENNFTLLNSFWFG+G+LMQQGSELMPKALSTRI+GGIWWFFTLIIISSYTANLAAF
Sbjct: 614 SDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAF 673

Query: 661 LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSK-PSALV 719
           LTVERMESPIDSADDLAKQTKIEYGAV+DG+TMTFFKKSKIST+EKMWAFMSS+  +ALV
Sbjct: 674 LTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALV 733

Query: 720 KNNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKI 779
           +N++EGIQR LT DYALLMEST+IEYVTQRNCNLTQIGGLIDSKGYG+GTP+GSPYRDKI
Sbjct: 734 RNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKI 793

Query: 780 TIAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVA 839
           TIAILQLQEE KLH+MKEKWWRG+GCPEE+NKEASALG++ IGGIFIVLAAGLVLSV VA
Sbjct: 794 TIAILQLQEEGKLHMMKEKWWRGNGCPEEDNKEASALGVENIGGIFIVLAAGLVLSVFVA 853

Query: 840 VGEFVYKLRKTAEREQRSFC 859
           +GEF+YK RK  + EQ +FC
Sbjct: 854 IGEFIYKSRKNNDIEQ-AFC 872


>gi|29029597 glutamate receptor KA2 precursor [Homo sapiens]
          Length = 980

 Score =  709 bits (1831), Expect = 0.0
 Identities = 375/828 (45%), Positives = 531/828 (64%), Gaps = 15/828 (1%)

Query: 82  DIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCT-NAVQSICNALEVPHIQLRWKHH 140
           DI  +     +E T   C  L  GVV++ GPS    + + V  IC   E+PHI++  +  
Sbjct: 66  DIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEET 125

Query: 141 P-LDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYN 199
           P L       V+LYP    +S A+  +++   + SA+++   +  L+RL+EL+       
Sbjct: 126 PRLQYLRFASVSLYPSNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELVRGFLISK 185

Query: 200 IRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIF 259
             L +R L  DS D  PLLKE++  +   II D + +++  IL++A  +GM + +Y +I 
Sbjct: 186 ETLSVRMLD-DSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYIL 244

Query: 260 TTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVM 319
           TT+D   L L+       N+ GF + N  +P     V   +M   +     E+    G  
Sbjct: 245 TTMDFPILHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRE---NCEASTYLGPA 301

Query: 320 MTDAALLYDAVHIVSVCYQ---RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTG 376
           ++ AAL++DAVH+V    +   R+ ++ V  L C     W  G   MN+++  +++GLTG
Sbjct: 302 LS-AALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTG 360

Query: 377 RIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSL 436
           R+ FN + G RT++ L I+     G  ++GVW     L +   A     N++ +L N++L
Sbjct: 361 RVEFN-SKGQRTNYTLRILEKSRQGHREIGVWYSNRTLAMN--ATTLDINLSQTLANKTL 417

Query: 437 IVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
           +VTT+LE P+VM R + + L GN+RFEG+C+D+L+ELA +L F Y +RLVEDG YGA + 
Sbjct: 418 VVTTILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEP 477

Query: 497 KGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFS 556
            G W GMV ELI+ KADLAVA  TIT  REK IDFSKPFMTLG+SILYR   G  P  FS
Sbjct: 478 NGSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFS 537

Query: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPC-NPGSEVVENNFTLLNSFW 615
           FL+P SP +W+++LLAYL VSCVLF+ AR SPYEWY+ HPC      ++EN +TL NS W
Sbjct: 538 FLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLW 597

Query: 616 FGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD 675
           F +G  MQQGSE+MP+ALSTR + G+WW FTLIIISSYTANLAAFLTV+RME P++SADD
Sbjct: 598 FPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADD 657

Query: 676 LAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSK-PSALVKNNEEGIQRALTADY 734
           LA QT IEYG +  G+TMTFF+ S+  T+++MW +M SK PS  VK+ EEGI R L + Y
Sbjct: 658 LADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRY 717

Query: 735 ALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI 794
           A L+EST  EY  + NCNLTQIGGL+D+KGYGIG P+GSP+RD+IT+AILQLQE ++L I
Sbjct: 718 AFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEI 777

Query: 795 MKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAERE 854
           +K KWW G  CP+EE+  A  LG++ IGGIFIVL  GL+++V VAV EF++  R++AE E
Sbjct: 778 LKRKWWEGGRCPKEEDHRAKGLGMENIGGIFIVLICGLIIAVFVAVMEFIWSTRRSAESE 837

Query: 855 QRSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTDAVINMHTFNDRRL 902
           + S C  +  E+R +++C++  + + +      + A++++    + RL
Sbjct: 838 EVSVCQEMLQELRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRL 885


>gi|29029595 glutamate receptor KA1 precursor [Homo sapiens]
          Length = 956

 Score =  680 bits (1754), Expect = 0.0
 Identities = 377/887 (42%), Positives = 537/887 (60%), Gaps = 36/887 (4%)

Query: 17  AGLLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPN 76
           A L++   W+      PH +RI  I    D P  +    E  +   + N INR    L  
Sbjct: 6   APLVLLPAWLVMVACSPHSLRIAAIL---DDP-MECSRGERLSITLAKNRINRAPERLGK 61

Query: 77  TTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQS-ICNALEVPHIQL 135
             +  DI  +     +E  +  C  L  GVVA+ GPS    ++++ S IC   EVPH ++
Sbjct: 62  AKVEVDIFELLRDSEYETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV 121

Query: 136 RWKHHPLDNKDTFY-VNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMA 194
             +         F  +NL+P    +S A+  ++ +    +A ++   +  L+ L++L+  
Sbjct: 122 APEEFVKFQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLRQ 181

Query: 195 PSRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEY 254
                  L +R L  D+ D  PLLKE++  +   II   + +M+  IL +A  +GM++ Y
Sbjct: 182 FLISKDTLSVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAY 240

Query: 255 YHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGL 314
           Y +IFT L+     ++      VN+ GF I N  +         +  E  Q+  +S    
Sbjct: 241 YTYIFTNLEFSLQRMDSLVDDRVNILGFSIFNQSHA--------FFQEFAQSLNQSWQEN 292

Query: 315 LDGVMMT----DAALLYDAVHIVSVCYQ---RAPQMTVNSLQCHRHKAWRFGGRFMNFIK 367
            D V  T     +ALL+DAV+ V    Q   R+ ++ V  L C   + W+ G   MN+++
Sbjct: 293 CDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLR 352

Query: 368 EAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNV 427
             + EGLTG I FN + G R+++ L I+    +G  ++G W  A+GL++         N+
Sbjct: 353 MVELEGLTGHIEFN-SKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHLYAS--NI 409

Query: 428 TDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVE 487
           +D+L N +L+VTT+LE P++M + + + + GNDR+EG+C+D+LKELA IL F+Y+IRLV 
Sbjct: 410 SDTLFNTTLVVTTILENPYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVG 469

Query: 488 DGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKP 547
           DG YG  +  G W GMV ELI  KADLAVA LTIT  REK IDFSKPFMTLG+SILYR  
Sbjct: 470 DGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVH 529

Query: 548 NGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG-SEVVEN 606
            G  P  FSFL+P SP +W+++LLAYL VSCVLF++AR +PYEWY  HPC  G   ++ N
Sbjct: 530 MGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVN 589

Query: 607 NFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERM 666
            ++L NS WF +G  MQQGS + P+ALSTR + G+WW FTLIIISSYTANLAAFLTV+RM
Sbjct: 590 QYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRM 649

Query: 667 ESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSK-PSALVKNNEEG 725
           + PI+S DDLA QT IEYG +  G++MTFF+ S+  T+++MW +M SK PS  VK+ EEG
Sbjct: 650 DVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFVKSTEEG 709

Query: 726 IQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQ 785
           I R L ++YA L+EST  EY  QRNCNLTQIGGL+D+KGYGIG P+GS +RD+  +AILQ
Sbjct: 710 IARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQ 769

Query: 786 LQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVY 845
           LQE ++L I+K KWW G  CP+EE+  A  LG++ IGGIF+VL  GL++++ +A+ EF++
Sbjct: 770 LQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFLW 829

Query: 846 KLRKTAEREQRSFCSTVADEIRFSLTCQ--------RRVKHKPQPPM 884
            LR  +E  + S C  +  E+R  + CQ        R     P+PP+
Sbjct: 830 TLRH-SEATEVSVCQEMVTELRSIILCQDSIHPRRRRAAVPPPRPPI 875


>gi|167001419 glutamate receptor, ionotropic, AMPA 1 isoform 1 [Homo
           sapiens]
          Length = 906

 Score =  606 bits (1562), Expect = e-173
 Identities = 342/850 (40%), Positives = 513/850 (60%), Gaps = 51/850 (6%)

Query: 33  PHVIRIGGIFEYADGPNAQVMNAEEHA-FRFSANIINRNRTLLPNTTLTYDIQRIHFHDS 91
           P+ I+IGG+F     PN Q   ++EHA FRF+ + +     LLP       I  ++  DS
Sbjct: 22  PNNIQIGGLF-----PNQQ---SQEHAAFRFALSQLTEPPKLLPQ------IDIVNISDS 67

Query: 92  FEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYVN 151
           FE T + C Q + GV AIFG  +    N + S C AL V  I   +   P+D  + F + 
Sbjct: 68  FEMTYRFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSF---PVDTSNQFVLQ 124

Query: 152 LYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLK-IRQLPID 210
           L P+   L  A++ ++ + KW+    +YD   GL  LQ+++   +  N ++  +  L   
Sbjct: 125 LRPE---LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTTT 181

Query: 211 SDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLE 270
            +  R L +++++ +E  ++ DC       IL Q + +      YH+I   L    +DL 
Sbjct: 182 EEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLN 241

Query: 271 PYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAALLYDAV 330
            ++ SG N+TGF+++N  +   + I+++W      +  R  + +        +AL YD V
Sbjct: 242 KFKESGANVTGFQLVNYTDTIPAKIMQQWK----NSDARDHTRVDWKRPKYTSALTYDGV 297

Query: 331 HIVSVCYQRAPQMTV------NSLQCHRHKA--WRFGGRFMNFIKEAQWEGLTGRIVFNK 382
            +++  +Q   +  +      N+  C  + A  W  G      +++ ++EGLTG + FN+
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNE 357

Query: 383 TSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTTVL 442
             G RT++ L +I +K DG+ K+G W+  D   +      +      S+ NR+ IVTT+L
Sbjct: 358 -KGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF-VPAATDAQAGGDNSSVQNRTYIVTTIL 415

Query: 443 EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQD-DKGQWN 501
           E+P+VM +K+     GNDR+EGYC++L  E+A  +G+SY + +V DGKYGA+D D   WN
Sbjct: 416 EDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWN 475

Query: 502 GMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPL 561
           GMV EL+  +AD+AVAPLTIT VRE+ IDFSKPFM+LG+SI+ +KP  + P VFSFL+PL
Sbjct: 476 GMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPL 535

Query: 562 SPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVE---NNFTLLNSFWFGM 618
           + +IWM ++ AY+GVS VLF+++RFSPYEW+         +      N F + NS WF +
Sbjct: 536 AYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSL 595

Query: 619 GSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAK 678
           G+ MQQG ++ P++LS RI+GG+WWFFTLIIISSYTANLAAFLTVERM SPI+SA+DLAK
Sbjct: 596 GAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAK 655

Query: 679 QTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALTA--DYA 735
           QT+I YG ++ G+T  FF++SKI+ FEKMW +M S++PS  V+  EEG+ R   +   YA
Sbjct: 656 QTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYA 715

Query: 736 LLMESTTIEYVTQRN-CNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI 794
            L+EST  EY+ QR  C+  ++GG +DSKGYGI TP GS  R+ + +A+L+L E+  L  
Sbjct: 716 YLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQGLLDK 775

Query: 795 MKEKWWR-----GSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRK 849
           +K KWW      GSG  + ++K  SAL +  + G+F +L  GL L++LVA+ EF YK R 
Sbjct: 776 LKNKWWYDKGECGSGGGDSKDK-TSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRS 834

Query: 850 TAEREQRSFC 859
            ++R  + FC
Sbjct: 835 ESKR-MKGFC 843


>gi|167001484 glutamate receptor, ionotropic, AMPA 1 isoform 2 [Homo
           sapiens]
          Length = 906

 Score =  604 bits (1558), Expect = e-172
 Identities = 340/849 (40%), Positives = 511/849 (60%), Gaps = 49/849 (5%)

Query: 33  PHVIRIGGIFEYADGPNAQVMNAEEHA-FRFSANIINRNRTLLPNTTLTYDIQRIHFHDS 91
           P+ I+IGG+F     PN Q   ++EHA FRF+ + +     LLP       I  ++  DS
Sbjct: 22  PNNIQIGGLF-----PNQQ---SQEHAAFRFALSQLTEPPKLLPQ------IDIVNISDS 67

Query: 92  FEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYVN 151
           FE T + C Q + GV AIFG  +    N + S C AL V  I   +   P+D  + F + 
Sbjct: 68  FEMTYRFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSF---PVDTSNQFVLQ 124

Query: 152 LYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLK-IRQLPID 210
           L P+   L  A++ ++ + KW+    +YD   GL  LQ+++   +  N ++  +  L   
Sbjct: 125 LRPE---LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTTT 181

Query: 211 SDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLE 270
            +  R L +++++ +E  ++ DC       IL Q + +      YH+I   L    +DL 
Sbjct: 182 EEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLN 241

Query: 271 PYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAALLYDAV 330
            ++ SG N+TGF+++N  +   + I+++W      +  R  + +        +AL YD V
Sbjct: 242 KFKESGANVTGFQLVNYTDTIPAKIMQQWK----NSDARDHTRVDWKRPKYTSALTYDGV 297

Query: 331 HIVSVCYQRAPQMTV------NSLQCHRHKA--WRFGGRFMNFIKEAQWEGLTGRIVFNK 382
            +++  +Q   +  +      N+  C  + A  W  G      +++ ++EGLTG + FN+
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNE 357

Query: 383 TSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTTVL 442
             G RT++ L +I +K DG+ K+G W+  D   +      +      S+ NR+ IVTT+L
Sbjct: 358 -KGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF-VPAATDAQAGGDNSSVQNRTYIVTTIL 415

Query: 443 EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQD-DKGQWN 501
           E+P+VM +K+     GNDR+EGYC++L  E+A  +G+SY + +V DGKYGA+D D   WN
Sbjct: 416 EDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWN 475

Query: 502 GMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPL 561
           GMV EL+  +AD+AVAPLTIT VRE+ IDFSKPFM+LG+SI+ +KP  + P VFSFL+PL
Sbjct: 476 GMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPL 535

Query: 562 SPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVE---NNFTLLNSFWFGM 618
           + +IWM ++ AY+GVS VLF+++RFSPYEW+         +      N F + NS WF +
Sbjct: 536 AYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSL 595

Query: 619 GSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAK 678
           G+ MQQG ++ P++LS RI+GG+WWFFTLIIISSYTANLAAFLTVERM SPI+SA+DLAK
Sbjct: 596 GAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAK 655

Query: 679 QTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALTA--DYA 735
           QT+I YG ++ G+T  FF++SKI+ FEKMW +M S++PS  V+  EEG+ R   +   YA
Sbjct: 656 QTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYA 715

Query: 736 LLMESTTIEYVTQRN-CNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI 794
            L+EST  EY+ QR  C+  ++GG +DSKGYGI TP GS  R  + +A+L+L E+  L  
Sbjct: 716 YLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDK 775

Query: 795 MKEKWWRGSG-CPEEEN---KEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKT 850
           +K KWW   G C  +++    + SAL +  + G+F +L  GL L++LVA+ EF YK R  
Sbjct: 776 LKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSE 835

Query: 851 AEREQRSFC 859
           ++R  + FC
Sbjct: 836 SKR-MKGFC 843


>gi|134304848 glutamate receptor, ionotropic, AMPA 2 isoform 2
           precursor [Homo sapiens]
          Length = 883

 Score =  595 bits (1534), Expect = e-170
 Identities = 331/804 (41%), Positives = 484/804 (60%), Gaps = 45/804 (5%)

Query: 79  LTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWK 138
           LT  I  +   +SF  T   C Q + GV AIFG       N + S C  L   H+     
Sbjct: 58  LTPHIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCGTL---HVSFITP 114

Query: 139 HHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI--MAPS 196
             P D    F + + PD   L  A+L L++Y +W     +YD   GL  LQ ++   A  
Sbjct: 115 SFPTDGTHPFVIQMRPD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEK 171

Query: 197 RYNIR-LKIRQLPIDSDDS--RPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTE 253
           ++ +  + +  +  D  D   R L ++++  +E R+I DC       I+ Q + +G   +
Sbjct: 172 KWQVTAINVGNINNDKKDEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVK 231

Query: 254 YYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESG 313
            YH+I   L     DL   ++ G N++GF+I++ D+  VS  +E+WS    +  P    G
Sbjct: 232 GYHYIIANLGFTDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP----G 287

Query: 314 LLDGVMMTDAALLYDAVHIVSVCYQRAPQMTV------NSLQCHRHKA--WRFGGRFMNF 365
                +   +AL YDAV +++  ++   +  +      N+  C  + A  W  G      
Sbjct: 288 AHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERA 347

Query: 366 IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGL--NITEVAKGR 423
           +K+ Q EGL+G I F++ +G R ++ ++I+ LK +G  K+G WS  D +   +TE+  G 
Sbjct: 348 LKQVQVEGLSGNIKFDQ-NGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTELPSG- 405

Query: 424 GPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEI 483
             N T  L N++++VTT+LE P+VM +K+   L GN+R+EGYC+DL  E+A   GF Y++
Sbjct: 406 --NDTSGLENKTVVVTTILESPYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKL 463

Query: 484 RLVEDGKYGAQD-DKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSI 542
            +V DGKYGA+D D   WNGMV EL+  KAD+A+APLTIT VRE+ IDFSKPFM+LG+SI
Sbjct: 464 TIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISI 523

Query: 543 LYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSE 602
           + +KP  + P VFSFL+PL+ +IWM ++ AY+GVS VLF+++RFSPYEW+       G E
Sbjct: 524 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWH-TEEFEDGRE 582

Query: 603 VVE----NNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLA 658
                  N F + NS WF +G+ M+QG ++ P++LS RI+GG+WWFFTLIIISSYTANLA
Sbjct: 583 TQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLA 642

Query: 659 AFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSA 717
           AFLTVERM SPI+SA+DL+KQT+I YG +  G+T  FF++SKI+ F+KMW +M S++PS 
Sbjct: 643 AFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSV 702

Query: 718 LVKNNEEGIQRALTA--DYALLMESTTIEYVTQRN-CNLTQIGGLIDSKGYGIGTPMGSP 774
            V+   EG+ R   +   YA L+EST  EY+ QR  C+  ++GG +DSKGYGI TP GS 
Sbjct: 703 FVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSS 762

Query: 775 YRDKITIAILQLQEEDKLHIMKEKWWR-----GSGCPEEENKEASALGIQKIGGIFIVLA 829
            R+ + +A+L+L E+  L  +K KWW      GSG  + + K  SAL +  + G+F +L 
Sbjct: 763 LRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKEK-TSALSLSNVAGVFYILV 821

Query: 830 AGLVLSVLVAVGEFVYKLRKTAER 853
            GL L++LVA+ EF YK R  A+R
Sbjct: 822 GGLGLAMLVALIEFCYKSRAEAKR 845


>gi|134304851 glutamate receptor, ionotropic, AMPA 2 isoform 3 [Homo
           sapiens]
          Length = 836

 Score =  594 bits (1532), Expect = e-169
 Identities = 329/803 (40%), Positives = 484/803 (60%), Gaps = 43/803 (5%)

Query: 79  LTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWK 138
           LT  I  +   +SF  T   C Q + GV AIFG       N + S C  L   H+     
Sbjct: 11  LTPHIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCGTL---HVSFITP 67

Query: 139 HHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI--MAPS 196
             P D    F + + PD   L  A+L L++Y +W     +YD   GL  LQ ++   A  
Sbjct: 68  SFPTDGTHPFVIQMRPD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEK 124

Query: 197 RYNIR-LKIRQLPIDSDDS--RPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTE 253
           ++ +  + +  +  D  D   R L ++++  +E R+I DC       I+ Q + +G   +
Sbjct: 125 KWQVTAINVGNINNDKKDEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVK 184

Query: 254 YYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESG 313
            YH+I   L     DL   ++ G N++GF+I++ D+  VS  +E+WS    +  P    G
Sbjct: 185 GYHYIIANLGFTDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP----G 240

Query: 314 LLDGVMMTDAALLYDAVHIVSVCYQRAPQMTV------NSLQCHRHKA--WRFGGRFMNF 365
                +   +AL YDAV +++  ++   +  +      N+  C  + A  W  G      
Sbjct: 241 AHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERA 300

Query: 366 IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGL--NITEVAKGR 423
           +K+ Q EGL+G I F++ +G R ++ ++I+ LK +G  K+G WS  D +   +TE+  G 
Sbjct: 301 LKQVQVEGLSGNIKFDQ-NGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTELPSG- 358

Query: 424 GPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEI 483
             N T  L N++++VTT+LE P+VM +K+   L GN+R+EGYC+DL  E+A   GF Y++
Sbjct: 359 --NDTSGLENKTVVVTTILESPYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKL 416

Query: 484 RLVEDGKYGAQD-DKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSI 542
            +V DGKYGA+D D   WNGMV EL+  KAD+A+APLTIT VRE+ IDFSKPFM+LG+SI
Sbjct: 417 TIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISI 476

Query: 543 LYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSE 602
           + +KP  + P VFSFL+PL+ +IWM ++ AY+GVS VLF+++RFSPYEW+       G E
Sbjct: 477 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWH-TEEFEDGRE 535

Query: 603 VVE----NNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLA 658
                  N F + NS WF +G+ M+QG ++ P++LS RI+GG+WWFFTLIIISSYTANLA
Sbjct: 536 TQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLA 595

Query: 659 AFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSA 717
           AFLTVERM SPI+SA+DL+KQT+I YG +  G+T  FF++SKI+ F+KMW +M S++PS 
Sbjct: 596 AFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSV 655

Query: 718 LVKNNEEGIQRALTA--DYALLMESTTIEYVTQRN-CNLTQIGGLIDSKGYGIGTPMGSP 774
            V+   EG+ R   +   YA L+EST  EY+ QR  C+  ++GG +DSKGYGI TP GS 
Sbjct: 656 FVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSS 715

Query: 775 YRDKITIAILQLQEEDKLHIMKEKWWRGSG-CPEEEN---KEASALGIQKIGGIFIVLAA 830
            R  + +A+L+L E+  L  +K KWW   G C  +++   ++ SAL +  + G+F +L  
Sbjct: 716 LRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVG 775

Query: 831 GLVLSVLVAVGEFVYKLRKTAER 853
           GL L++LVA+ EF YK R  A+R
Sbjct: 776 GLGLAMLVALIEFCYKSRAEAKR 798


>gi|74275354 glutamate receptor, ionotropic, AMPA 2 isoform 1
           precursor [Homo sapiens]
          Length = 883

 Score =  594 bits (1532), Expect = e-169
 Identities = 329/803 (40%), Positives = 484/803 (60%), Gaps = 43/803 (5%)

Query: 79  LTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWK 138
           LT  I  +   +SF  T   C Q + GV AIFG       N + S C  L   H+     
Sbjct: 58  LTPHIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCGTL---HVSFITP 114

Query: 139 HHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI--MAPS 196
             P D    F + + PD   L  A+L L++Y +W     +YD   GL  LQ ++   A  
Sbjct: 115 SFPTDGTHPFVIQMRPD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEK 171

Query: 197 RYNIR-LKIRQLPIDSDDS--RPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTE 253
           ++ +  + +  +  D  D   R L ++++  +E R+I DC       I+ Q + +G   +
Sbjct: 172 KWQVTAINVGNINNDKKDEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVK 231

Query: 254 YYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESG 313
            YH+I   L     DL   ++ G N++GF+I++ D+  VS  +E+WS    +  P    G
Sbjct: 232 GYHYIIANLGFTDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP----G 287

Query: 314 LLDGVMMTDAALLYDAVHIVSVCYQRAPQMTV------NSLQCHRHKA--WRFGGRFMNF 365
                +   +AL YDAV +++  ++   +  +      N+  C  + A  W  G      
Sbjct: 288 AHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERA 347

Query: 366 IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGL--NITEVAKGR 423
           +K+ Q EGL+G I F++ +G R ++ ++I+ LK +G  K+G WS  D +   +TE+  G 
Sbjct: 348 LKQVQVEGLSGNIKFDQ-NGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTELPSG- 405

Query: 424 GPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEI 483
             N T  L N++++VTT+LE P+VM +K+   L GN+R+EGYC+DL  E+A   GF Y++
Sbjct: 406 --NDTSGLENKTVVVTTILESPYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKL 463

Query: 484 RLVEDGKYGAQD-DKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSI 542
            +V DGKYGA+D D   WNGMV EL+  KAD+A+APLTIT VRE+ IDFSKPFM+LG+SI
Sbjct: 464 TIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISI 523

Query: 543 LYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSE 602
           + +KP  + P VFSFL+PL+ +IWM ++ AY+GVS VLF+++RFSPYEW+       G E
Sbjct: 524 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWH-TEEFEDGRE 582

Query: 603 VVE----NNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLA 658
                  N F + NS WF +G+ M+QG ++ P++LS RI+GG+WWFFTLIIISSYTANLA
Sbjct: 583 TQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLA 642

Query: 659 AFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSA 717
           AFLTVERM SPI+SA+DL+KQT+I YG +  G+T  FF++SKI+ F+KMW +M S++PS 
Sbjct: 643 AFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSV 702

Query: 718 LVKNNEEGIQRALTA--DYALLMESTTIEYVTQRN-CNLTQIGGLIDSKGYGIGTPMGSP 774
            V+   EG+ R   +   YA L+EST  EY+ QR  C+  ++GG +DSKGYGI TP GS 
Sbjct: 703 FVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSS 762

Query: 775 YRDKITIAILQLQEEDKLHIMKEKWWRGSG-CPEEEN---KEASALGIQKIGGIFIVLAA 830
            R  + +A+L+L E+  L  +K KWW   G C  +++   ++ SAL +  + G+F +L  
Sbjct: 763 LRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVG 822

Query: 831 GLVLSVLVAVGEFVYKLRKTAER 853
           GL L++LVA+ EF YK R  A+R
Sbjct: 823 GLGLAMLVALIEFCYKSRAEAKR 845


>gi|164419734 glutamate receptor, ionotrophic, AMPA 4 isoform 1
           precursor [Homo sapiens]
          Length = 902

 Score =  590 bits (1522), Expect = e-168
 Identities = 337/879 (38%), Positives = 510/879 (58%), Gaps = 50/879 (5%)

Query: 19  LLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTT 78
           LL   FW       P  ++IGG+F         + N ++    F   I   N +  PN +
Sbjct: 10  LLFSGFWGLAMGAFPSSVQIGGLF---------IRNTDQEYTAFRLAIFLHNTS--PNAS 58

Query: 79  -----LTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHI 133
                L   +  I   +SF  T   C Q + GV AIFG       + + S C+AL   HI
Sbjct: 59  EAPFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRSVHTLTSFCSAL---HI 115

Query: 134 QLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIM 193
            L     P + +  F + L P   SL  A+L L+ + +W     +YD   G   LQ ++ 
Sbjct: 116 SLITPSFPTEGESQFVLQLRP---SLRGALLSLLDHYEWNCFVFLYDTDRGYSILQAIME 172

Query: 194 APSRYNIRLKIRQLPIDSDDS-RPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMT 252
              +    +    +   +D S R LL+E+ R +E + + DC       IL+Q +++G   
Sbjct: 173 KAGQNGWHVSAICVENFNDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHV 232

Query: 253 EYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSES 312
           + YH+I   L    + LE + + G N+TGF++++ + P V  ++++W     +  P SE+
Sbjct: 233 KGYHYIIANLGFKDISLERFIHGGANVTGFQLVDFNTPMVIKLMDRWKKLDQREYPGSET 292

Query: 313 GLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTV------NSLQCHRHKA--WRFGGRFMN 364
                     +AL YD V +++  ++   +  +      N+  C  + A  W  G     
Sbjct: 293 P-----PKYTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMER 347

Query: 365 FIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRG 424
            +K+ + +GLTG + F+   G R ++ +D+  LK  G  KVG W+  D L + +     G
Sbjct: 348 TLKQVRIQGLTGNVQFDHY-GRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLG 406

Query: 425 PNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIR 484
            N T ++ NR+++VTT++E P+VM++K+     GND++EGYC+DL  E+A  +G  Y+I 
Sbjct: 407 -NDTAAIENRTVVVTTIMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIA 465

Query: 485 LVEDGKYGAQD-DKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSIL 543
           +V DGKYGA+D D   WNGMV EL+  KA++A+APLTIT VRE+ IDFSKPFM+LG+SI+
Sbjct: 466 IVPDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIM 525

Query: 544 YRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG--- 600
            +KP  + P VFSFL+PL+ +IWM ++ AY+GVS VLF+++RFSPYEW+   P +     
Sbjct: 526 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGP 585

Query: 601 SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF 660
           S+   N F + NS WF +G+ MQQG ++ P++LS RI+GG+WWFFTLIIISSYTANLAAF
Sbjct: 586 SDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 645

Query: 661 LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSALV 719
           LTVERM SPI+SA+DLAKQT+I YG +  G+T  FF++SKI+ +EKMW +M S++PS   
Sbjct: 646 LTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFT 705

Query: 720 KNNEEGIQRALTA--DYALLMESTTIEYVTQRN-CNLTQIGGLIDSKGYGIGTPMGSPYR 776
           +   EG+ R   +   +A L+EST  EY+ QR  C+  ++GG +DSKGYG+ TP GS   
Sbjct: 706 RTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLG 765

Query: 777 DKITIAILQLQEEDKLHIMKEKWWRGSG-CPEEEN---KEASALGIQKIGGIFIVLAAGL 832
             + +A+L+L E   L  +K KWW   G C  +++    + SAL +  + G+F +L  GL
Sbjct: 766 TPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGL 825

Query: 833 VLSVLVAVGEFVYKLRKTAEREQRSFCSTVADEIRFSLT 871
            L++LVA+ EF YK R  A+R + +F   + ++ R S+T
Sbjct: 826 GLAMLVALIEFCYKSRAEAKRMKLTFSEAIRNKARLSIT 864


>gi|163659858 glutamate receptor, ionotrophic, AMPA 3 isoform 2
           precursor [Homo sapiens]
          Length = 894

 Score =  587 bits (1512), Expect = e-167
 Identities = 337/854 (39%), Positives = 504/854 (59%), Gaps = 57/854 (6%)

Query: 31  GMPHVIRIGGIFEYADGPNAQVMNAEEH-AFRFSANIINRNRTLLPNTT-----LTYDIQ 84
           G P+ I IGG+F             +EH AFRF+  + N N+    NTT     L Y + 
Sbjct: 29  GFPNTISIGGLF--------MRNTVQEHSAFRFAVQLYNTNQ----NTTEKPFHLNYHVD 76

Query: 85  RIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDN 144
            +   +SF  T   C Q + GV AIFG       N + S C AL   H        P D 
Sbjct: 77  HLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGAL---HTSFVTPSFPTDA 133

Query: 145 KDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKI 204
              F + + P   +L  AIL L+ + KW     +YD   G   LQ ++ A  + N ++  
Sbjct: 134 DVQFVIQMRP---ALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTA 190

Query: 205 RQLPI--DSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTL 262
           R +    D  + R +++EM R +E R + DC       IL+Q + +G  +  YH++   L
Sbjct: 191 RSVGNIKDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANL 250

Query: 263 DLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTD 322
               + LE   + G N+TGF+I+N +NP V   +++W     +  P +++  L       
Sbjct: 251 GFTDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYT---- 306

Query: 323 AALLYDAVHIVSVCYQRAPQMTVNSLQ------CHRHKA--WRFGGRFMNFIKEAQWEGL 374
           +AL +DA+ +++  ++   +  V+  +      C  + A  W  G      +K  Q +G+
Sbjct: 307 SALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGM 366

Query: 375 TGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNR 434
           TG I F+ T G RT++ +D+  +K  G  K G W+  +       +  +  N + S  NR
Sbjct: 367 TGNIQFD-TYGRRTNYTIDVYEMKVSGSRKAGYWNEYE--RFVPFSDQQISNDSASSENR 423

Query: 435 SLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQ 494
           +++VTT+LE P+VM++K+   L GN+R+EGYC+DL  E+A  +   Y++ +V DGKYGA+
Sbjct: 424 TIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGAR 483

Query: 495 DDKGQ-WNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPS 553
           D + + WNGMV EL+  +AD+AVAPLTIT VRE+ IDFSKPFM+LG+SI+ +KP  + P 
Sbjct: 484 DPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 543

Query: 554 VFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWY----DAHPCNPGSEV-VENNF 608
           VFSFL+PL+ +IWM ++ AY+GVS VLF+++RFSPYEW+    +  P +P S     N F
Sbjct: 544 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDNNEEPRDPQSPPDPPNEF 603

Query: 609 TLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMES 668
            + NS WF +G+ MQQG ++ P++LS RI+GG+WWFFTLIIISSYTANLAAFLTVERM S
Sbjct: 604 GIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVS 663

Query: 669 PIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSALVKNNEEGIQ 727
           PI+SA+DLAKQT+I YG +  G+T  FF++SKI+ +EKMW++M S++PS   K   +G+ 
Sbjct: 664 PIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVA 723

Query: 728 RALTA--DYALLMESTTIEYVTQRN-CNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAIL 784
           R   +   +A L+EST  EY+ QR  C+  ++GG +DSKGYG+ TP GS   + + +A+L
Sbjct: 724 RVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAVNLAVL 783

Query: 785 QLQEEDKLHIMKEKWWR-----GSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVA 839
           +L E+  L  +K KWW      GSG  + ++K  SAL +  + G+F +L  GL L+++VA
Sbjct: 784 KLNEQGLLDKLKNKWWYDKGECGSGGGDSKDK-TSALSLSNVAGVFYILVGGLGLAMMVA 842

Query: 840 VGEFVYKLRKTAER 853
           + EF YK R  ++R
Sbjct: 843 LIEFCYKSRAESKR 856


>gi|164419736 glutamate receptor, ionotrophic, AMPA 4 isoform 2
           precursor [Homo sapiens]
          Length = 884

 Score =  585 bits (1508), Expect = e-167
 Identities = 335/862 (38%), Positives = 503/862 (58%), Gaps = 52/862 (6%)

Query: 19  LLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTT 78
           LL   FW       P  ++IGG+F         + N ++    F   I   N +  PN +
Sbjct: 10  LLFSGFWGLAMGAFPSSVQIGGLF---------IRNTDQEYTAFRLAIFLHNTS--PNAS 58

Query: 79  -----LTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHI 133
                L   +  I   +SF  T   C Q + GV AIFG       + + S C+AL   HI
Sbjct: 59  EAPFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRSVHTLTSFCSAL---HI 115

Query: 134 QLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIM 193
            L     P + +  F + L P   SL  A+L L+ + +W     +YD   G   LQ ++ 
Sbjct: 116 SLITPSFPTEGESQFVLQLRP---SLRGALLSLLDHYEWNCFVFLYDTDRGYSILQAIME 172

Query: 194 APSRYNIRLKIRQLPIDSDDS-RPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMT 252
              +    +    +   +D S R LL+E+ R +E + + DC       IL+Q +++G   
Sbjct: 173 KAGQNGWHVSAICVENFNDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHV 232

Query: 253 EYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSES 312
           + YH+I   L    + LE + + G N+TGF++++ + P V  ++++W     +  P SE+
Sbjct: 233 KGYHYIIANLGFKDISLERFIHGGANVTGFQLVDFNTPMVIKLMDRWKKLDQREYPGSET 292

Query: 313 GLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTV------NSLQCHRHKA--WRFGGRFMN 364
                     +AL YD V +++  ++   +  +      N+  C  + A  W  G     
Sbjct: 293 P-----PKYTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMER 347

Query: 365 FIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRG 424
            +K+ + +GLTG + F+   G R ++ +D+  LK  G  KVG W+  D L + +     G
Sbjct: 348 TLKQVRIQGLTGNVQFDHY-GRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLG 406

Query: 425 PNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIR 484
            N T ++ NR+++VTT++E P+VM++K+     GND++EGYC+DL  E+A  +G  Y+I 
Sbjct: 407 -NDTAAIENRTVVVTTIMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIA 465

Query: 485 LVEDGKYGAQD-DKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSIL 543
           +V DGKYGA+D D   WNGMV EL+  KA++A+APLTIT VRE+ IDFSKPFM+LG+SI+
Sbjct: 466 IVPDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIM 525

Query: 544 YRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG--- 600
            +KP  + P VFSFL+PL+ +IWM ++ AY+GVS VLF+++RFSPYEW+   P +     
Sbjct: 526 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGP 585

Query: 601 SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF 660
           S+   N F + NS WF +G+ MQQG ++ P++LS RI+GG+WWFFTLIIISSYTANLAAF
Sbjct: 586 SDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 645

Query: 661 LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSALV 719
           LTVERM SPI+SA+DLAKQT+I YG +  G+T  FF++SKI+ +EKMW +M S++PS   
Sbjct: 646 LTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFT 705

Query: 720 KNNEEGIQRALTA--DYALLMESTTIEYVTQRN-CNLTQIGGLIDSKGYGIGTPMGSPYR 776
           +   EG+ R   +   +A L+EST  EY+ QR  C+  ++GG +DSKGYG+ TP GS   
Sbjct: 706 RTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLG 765

Query: 777 DKITIAILQLQEEDKLHIMKEKWWR-----GSGCPEEENKEASALGIQKIGGIFIVLAAG 831
           + + +A+L+L E+  L  +K KWW      GSG  + ++K  SAL +  + G+F +L  G
Sbjct: 766 NAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDK-TSALSLSNVAGVFYILVGG 824

Query: 832 LVLSVLVAVGEFVYKLRKTAER 853
           L L++LVA+ EF YK R  A+R
Sbjct: 825 LGLAMLVALIEFCYKSRAEAKR 846


>gi|163659856 glutamate receptor, ionotrophic, AMPA 3 isoform 1
           precursor [Homo sapiens]
          Length = 894

 Score =  584 bits (1506), Expect = e-166
 Identities = 335/853 (39%), Positives = 502/853 (58%), Gaps = 55/853 (6%)

Query: 31  GMPHVIRIGGIFEYADGPNAQVMNAEEH-AFRFSANIINRNRTLLPNTT-----LTYDIQ 84
           G P+ I IGG+F             +EH AFRF+  + N N+    NTT     L Y + 
Sbjct: 29  GFPNTISIGGLF--------MRNTVQEHSAFRFAVQLYNTNQ----NTTEKPFHLNYHVD 76

Query: 85  RIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDN 144
            +   +SF  T   C Q + GV AIFG       N + S C AL   H        P D 
Sbjct: 77  HLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGAL---HTSFVTPSFPTDA 133

Query: 145 KDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKI 204
              F + + P   +L  AIL L+ + KW     +YD   G   LQ ++ A  + N ++  
Sbjct: 134 DVQFVIQMRP---ALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTA 190

Query: 205 RQLPI--DSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTL 262
           R +    D  + R +++EM R +E R + DC       IL+Q + +G  +  YH++   L
Sbjct: 191 RSVGNIKDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANL 250

Query: 263 DLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTD 322
               + LE   + G N+TGF+I+N +NP V   +++W     +  P +++  L       
Sbjct: 251 GFTDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYT---- 306

Query: 323 AALLYDAVHIVSVCYQRAPQMTVNSLQ------CHRHKA--WRFGGRFMNFIKEAQWEGL 374
           +AL +DA+ +++  ++   +  V+  +      C  + A  W  G      +K  Q +G+
Sbjct: 307 SALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGM 366

Query: 375 TGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNR 434
           TG I F+ T G RT++ +D+  +K  G  K G W+  +       +  +  N + S  NR
Sbjct: 367 TGNIQFD-TYGRRTNYTIDVYEMKVSGSRKAGYWNEYE--RFVPFSDQQISNDSASSENR 423

Query: 435 SLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQ 494
           +++VTT+LE P+VM++K+   L GN+R+EGYC+DL  E+A  +   Y++ +V DGKYGA+
Sbjct: 424 TIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGAR 483

Query: 495 DDKGQ-WNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPS 553
           D + + WNGMV EL+  +AD+AVAPLTIT VRE+ IDFSKPFM+LG+SI+ +KP  + P 
Sbjct: 484 DPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 543

Query: 554 VFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWY----DAHPCNPGSEV-VENNF 608
           VFSFL+PL+ +IWM ++ AY+GVS VLF+++RFSPYEW+    +  P +P S     N F
Sbjct: 544 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDNNEEPRDPQSPPDPPNEF 603

Query: 609 TLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMES 668
            + NS WF +G+ MQQG ++ P++LS RI+GG+WWFFTLIIISSYTANLAAFLTVERM S
Sbjct: 604 GIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVS 663

Query: 669 PIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSALVKNNEEGIQ 727
           PI+SA+DLAKQT+I YG +  G+T  FF++SKI+ +EKMW++M S++PS   K   +G+ 
Sbjct: 664 PIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVA 723

Query: 728 RALTA--DYALLMESTTIEYVTQRN-CNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAIL 784
           R   +   +A L+EST  EY+ QR  C+  ++GG +DSKGYG+ TP GS     + +A+L
Sbjct: 724 RVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGTPVNLAVL 783

Query: 785 QLQEEDKLHIMKEKWWRGSG-CPEEEN---KEASALGIQKIGGIFIVLAAGLVLSVLVAV 840
           +L E+  L  +K KWW   G C  +++    + SAL +  + G+F +L  GL L+++VA+
Sbjct: 784 KLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVAL 843

Query: 841 GEFVYKLRKTAER 853
            EF YK R  ++R
Sbjct: 844 IEFCYKSRAESKR 856


>gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [Homo
           sapiens]
          Length = 1009

 Score =  360 bits (924), Expect = 3e-99
 Identities = 269/906 (29%), Positives = 445/906 (49%), Gaps = 74/906 (8%)

Query: 35  VIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEA 94
           +I IG IFE     NA     ++  F+ + + ++ N  +L +  +TY I+ I  ++ F+A
Sbjct: 23  IIHIGAIFE----ENAA---KDDRVFQLAVSDLSLNDDILQSEKITYSIKVIEANNPFQA 75

Query: 95  TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYP 154
            ++ACD +  G++A+   +  +  NA+QS+ +A+ +PH+ ++ ++     +   ++N  P
Sbjct: 76  VQEACDLMTQGILALVTSTGCASANALQSLTDAMHIPHLFVQ-RNPGGSPRTACHLNPSP 134

Query: 155 DYAS----------LSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKI 204
           D  +          L+  +L LV  L+W+   + YD    +  LQ  +   SR  + + +
Sbjct: 135 DGEAYTLASRPPVRLNDVMLRLVTELRWQKFVMFYDSEYDIRGLQSFLDQASRLGLDVSL 194

Query: 205 RQLPIDSDDSRPL--------LKEMKRGREF--RIIFDCSHTMAAQILKQAMAMGMMTEY 254
           ++  +D + S            +E+ R R+   R I   S   A   + +A+   + ++ 
Sbjct: 195 QK--VDKNISHVFTSLFTTMKTEELNRYRDTLRRAILLLSPQGAHSFINEAVETNLASKD 252

Query: 255 YHFIFTTLDLYALDLEPYRYSGV-NLTGFR-ILNVDNPHVSAIVEKWSMERLQAAPRSES 312
            H++F   ++   ++    +S +  +T  R I      +         +  L   P  + 
Sbjct: 253 SHWVFVNEEISDPEILDLVHSALGRMTVVRQIFPSAKDNQKCTRNNHRISSLLCDP--QE 310

Query: 313 GLLDGVMMTDAALLYDAVHIVSVCYQRAPQ----MTVNSLQCHRH--KAWRFGGRFMNFI 366
           G L  + +++   LYD+V +++  + R  +     ++ SL C R   K W  G   ++ I
Sbjct: 311 GYLQMLQISN-LYLYDSVLMLANAFHRKLEDRKWHSMASLNCIRKSTKPWNGGRSMLDTI 369

Query: 367 KEAQWEGLTGRIVFNK-TSGLRTDFDLDIISLKE---DGLEKVGVWSPADGLNITEVAKG 422
           K+    GLTG + F + +S     F++   +  E     + K+  W    GLN +   + 
Sbjct: 370 KKGHITGLTGVMEFREDSSNPYVQFEILGTTYSETFGKDMRKLATWDSEKGLNGSLQERP 429

Query: 423 RGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
            G      L   +L V TVLEEPFVM   ++  L    R++G+ ID+L  LA  LGF YE
Sbjct: 430 MG----SRLQGLTLKVVTVLEEPFVMV--AENILGQPKRYKGFSIDVLDALAKALGFKYE 483

Query: 483 IRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSI 542
           I    DG+YG Q     WNGM+ ELI  +ADLA++ +TIT  RE  +DFSK +M   V I
Sbjct: 484 IYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITPERESVVDFSKRYMDYSVGI 543

Query: 543 LYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSE 602
           L +KP     S+FS   P    +W  +  A   V  ++FV+ R        A    P + 
Sbjct: 544 LIKKPE-EKISIFSLFAPFDFAVWACIAAAIPVVGVLIFVLNRIQAVRAQSAAQPRPSAS 602

Query: 603 VVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT 662
                 TL ++ W   G+ +QQG E    +++ RI+ G WW FTLI+ SSYTANLAAFLT
Sbjct: 603 A-----TLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLT 657

Query: 663 VERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKK------SKISTFEKMWAFMSSKPS 716
           V RM++PI +  DL+KQ ++ YG V+D A   +F+        + STF ++W  +S    
Sbjct: 658 VSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGG 717

Query: 717 A--LVKNNEEGIQRALTADYALLMESTTIEY--VTQRNCNLTQIGGLIDSKGYGIGTPMG 772
           A   V +  EGI++A   +YA L +   +EY  +T  +C++T IG  I SKGYGI    G
Sbjct: 718 ADNCVSSPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNSISSKGYGIALQHG 777

Query: 773 SPYRDKITIAILQLQEEDKLHIMKEKWWRGSG-CPEEENKEASA----LGIQKIGGIFIV 827
           SPYRD  +  IL+LQ+   L ++K+KWW   G C    +  A A    L +    G+F +
Sbjct: 778 SPYRDLFSQRILELQDTGDLDVLKQKWWPHMGRCDLTSHASAQADGKSLKLHSFAGVFCI 837

Query: 828 LAAGLVLSVLVAVGEFVYKLRKTAEREQRSFCSTVADEI--RFSLTCQRRVKHKPQPPMM 885
           LA GL+L+ LVA  E  +   +  +   +       +++  R +      + HK   P  
Sbjct: 838 LAIGLLLACLVAALELWWNSNRCHQETPKEDKEVNLEQVHRRMNSLMDEDIAHKQISPAS 897

Query: 886 VKTDAV 891
           ++  A+
Sbjct: 898 IELSAL 903


>gi|157384977 glutamate receptor, ionotropic, delta 2 [Homo sapiens]
          Length = 1007

 Score =  345 bits (886), Expect = 9e-95
 Identities = 258/888 (29%), Positives = 426/888 (47%), Gaps = 82/888 (9%)

Query: 14  EYWAGLLVCAFWIP---DSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN 70
           E +  LLV + W     DS     +I IG IF+       +    ++  FR +   +N+N
Sbjct: 2   EVFPFLLVLSVWWSRTWDSANADSIIHIGAIFD-------ESAKKDDEVFRTAVGDLNQN 54

Query: 71  RTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEV 130
             +L    +T+ +  +  ++ F+A ++AC+ +  G++A+      +   ++QS+ +A+ +
Sbjct: 55  EEILQTEKITFSVTFVDGNNPFQAVQEACELMNQGILALVSSIGCTSAGSLQSLADAMHI 114

Query: 131 PH--IQLRWKHHPLDNKDTFYVNLYPDYAS-------LSHAILDLVQYLKWRSATVVYDD 181
           PH  IQ      P         N   DY         L   IL +V    W+   + YD 
Sbjct: 115 PHLFIQRSTAGTPRSGCGLTRSNRNDDYTLSVRPPVYLHDVILRVVTEYAWQKFIIFYDS 174

Query: 182 STGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLL------KEMKRGREF--RIIFDC 233
              +  +QE +   S+  + + ++++  + +     L      +E+ R R+   R I   
Sbjct: 175 EYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDTMRIEELNRYRDTLRRAILVM 234

Query: 234 SHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDL-EPYRYSGVNLTGFRILNVDNPHV 292
           +   A   + + +   ++    H+I    ++  +D+ E  R S   LT  R         
Sbjct: 235 NPATAKSFITEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIR-------QT 287

Query: 293 SAIVEKWSMERLQAAPRSESGLLDGV------MMTDAALLYDAVHIVSVCYQRAPQ---- 342
             + +  S    +   R  S L D        M      +YD V +++  + +  +    
Sbjct: 288 FPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKW 347

Query: 343 MTVNSLQCHRH--KAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGL-RTDFDLDIISLKE 399
            ++ SL C R   K W+ G   +  IK+    GLTG + F +  G     F++   +  E
Sbjct: 348 HSMASLSCIRKNSKPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGE 407

Query: 400 D---GLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTL 456
           +   G+ K+G W+P  GLN +   K     + +++    L V TVLEEPFVM   S+  L
Sbjct: 408 ELGRGVRKLGCWNPVTGLNGSLTDK----KLENNMRGVVLRVVTVLEEPFVMV--SENVL 461

Query: 457 YGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAV 516
               +++G+ ID+L  L++ LGF+YEI +  D KYG+  + G WNG+V EL+  +AD+ +
Sbjct: 462 GKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGI 521

Query: 517 APLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGV 576
           + LTIT  RE  +DF+  +M   V +L R+   T   +F+ L P    +W  +    L V
Sbjct: 522 SALTITPDRENVVDFTTRYMDYSVGVLLRRAEKT-VDMFACLAPFDLSLWACIAGTVLLV 580

Query: 577 SCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTR 636
             +++++       W +      GS     + TL NS WF  GS +QQG E+    L+TR
Sbjct: 581 GLLVYLL------NWLNPPRLQMGSMT---STTLYNSMWFVYGSFVQQGGEVPYTTLATR 631

Query: 637 IIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFF 696
           ++ G WW F LI+ISSYTANLAAFLT+ R+ES I S  DL+KQT+I YG V D A     
Sbjct: 632 MMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHV 691

Query: 697 KKSKISTFEK------MWAFM--SSKPSALVKNNEEGIQRALTADYALLMESTTIEYV-- 746
           +   ++ FE+      MW  +  S+     V  ++ GIQ+    +YA + ++  +EYV  
Sbjct: 692 RMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI 751

Query: 747 TQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIMKEKWWRGSG-- 804
              +C+   IG  +  +GYGI    GSPYRD  +  IL+LQ+   + I+K KWW  +G  
Sbjct: 752 NDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQC 811

Query: 805 ---CPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRK 849
                 +  ++  AL I+   G+F +LAAG+VLS  +A+ E  +  RK
Sbjct: 812 DLYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLETWWNKRK 859


>gi|11038637 NMDA receptor 1 isoform NR1-3 precursor [Homo sapiens]
          Length = 938

 Score =  248 bits (633), Expect = 2e-65
 Identities = 220/821 (26%), Positives = 376/821 (45%), Gaps = 119/821 (14%)

Query: 149 YVNLYPDYASLSHAILDLVQYLKWRSATV-VYDDSTGLIRLQEL-IMAPSRYNIRLKIRQ 206
           ++   P Y+  S    ++++   W    + V DD  G    + L  +   R +   K+ Q
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQ 196

Query: 207 LPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYA 266
               + +   LL E K      II   S   AA + + A  + M    Y ++    ++  
Sbjct: 197 FDPGTKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISG 256

Query: 267 LDLEPYRYSGVNLTGFRILNVDNP--HVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAA 324
             L   RY+   + G +++N  N   H+S        + +    ++   LL+   +TD  
Sbjct: 257 NAL---RYAPDGILGLQLINGKNESAHIS--------DAVGVVAQAVHELLEKENITDP- 304

Query: 325 LLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW-EGLTGRIVFNKT 383
                           P+  V +        W+ G  F   +  +++ +G+TGR+ FN+ 
Sbjct: 305 ----------------PRGCVGNTNI-----WKTGPLFKRVLMSSKYADGVTGRVEFNE- 342

Query: 384 SGLRTDFDLDIISLKEDGLEKVGVWS-----PADGLNIT---EVAKGRGPNVTDSLTNRS 435
            G R   +  I++L+   L +VG+++     P D   I    E  K RG  ++  L    
Sbjct: 343 DGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK--- 399

Query: 436 LIVTTVLEEPFVMFR--------KSDRTLYG-----------NDRFEG------------ 464
             + T+ +EPFV  +        K + T+ G           ND   G            
Sbjct: 400 --IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYG 457

Query: 465 YCIDLLKELAHILGFSYEIRLVEDGKYGAQD-----DKGQWNGMVKELIDHKADLAVAPL 519
           +CIDLL +LA  + F+YE+ LV DGK+G Q+     +K +WNGM+ EL+  +AD+ VAPL
Sbjct: 458 FCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPL 517

Query: 520 TITHVREKAIDFSKPFMTLGVSILYRK--PNGTNPSVFSFLNPLSPDIWMYVLLAYLGVS 577
           TI + R + I+FSKPF   G++IL +K  P  T   + SF+ P    +W+ V L+   V+
Sbjct: 518 TINNERAQYIEFSKPFKYQGLTILVKKEIPRST---LDSFMQPFQSTLWLLVGLSVHVVA 574

Query: 578 CVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG-SELMPKALSTR 636
            +L+++ RFSP+  +  +      E  E+  TL ++ WF  G L+  G  E  P++ S R
Sbjct: 575 VMLYLLDRFSPFGRFKVN----SEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 630

Query: 637 IIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT---KIEYGAVKDGATM 693
           I+G +W  F +II++SYTANLAAFL ++R E  I   +D   +    K  Y  VK  +  
Sbjct: 631 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVD 690

Query: 694 TFFKKS-KISTFEKMWAFMSSKPSALVKNNEEGIQRALTAD-----YALLMESTTIEYVT 747
            +F++  ++ST   M+  M        K+N E    A+ A      +A + +S  +E+  
Sbjct: 691 IYFRRQVELST---MYRHME-------KHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEA 740

Query: 748 QRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIMKEKWWRGSGCPE 807
            + C+L   G L    G+GIG    SP++  ++++IL+  E   +  + + W R   C  
Sbjct: 741 SQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS 800

Query: 808 EENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAEREQRSFCSTVADEIR 867
             N  A+ L  + + G+F+++A G+V  + +   E  YK  K A R+Q        +  R
Sbjct: 801 RSNAPAT-LTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWR 859

Query: 868 FSLTCQRRVKHKPQPPMMVKTDAVIN-MHTFNDRRLPGKDS 907
            +L  ++  + +P P       A+ + + +   RR   KD+
Sbjct: 860 KNLQDRKSGRAEPDPKKKATFRAITSTLASSFKRRRSSKDT 900


>gi|11496971 NMDA receptor 1 isoform NR1-1 precursor [Homo sapiens]
          Length = 885

 Score =  244 bits (622), Expect = 3e-64
 Identities = 211/768 (27%), Positives = 356/768 (46%), Gaps = 118/768 (15%)

Query: 149 YVNLYPDYASLSHAILDLVQYLKWRSATV-VYDDSTGLIRLQEL-IMAPSRYNIRLKIRQ 206
           ++   P Y+  S    ++++   W    + V DD  G    + L  +   R +   K+ Q
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQ 196

Query: 207 LPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYA 266
               + +   LL E K      II   S   AA + + A  + M    Y ++    ++  
Sbjct: 197 FDPGTKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISG 256

Query: 267 LDLEPYRYSGVNLTGFRILNVDNP--HVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAA 324
             L   RY+   + G +++N  N   H+S        + +    ++   LL+   +TD  
Sbjct: 257 NAL---RYAPDGILGLQLINGKNESAHIS--------DAVGVVAQAVHELLEKENITDP- 304

Query: 325 LLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW-EGLTGRIVFNKT 383
                           P+  V +        W+ G  F   +  +++ +G+TGR+ FN+ 
Sbjct: 305 ----------------PRGCVGNTNI-----WKTGPLFKRVLMSSKYADGVTGRVEFNE- 342

Query: 384 SGLRTDFDLDIISLKEDGLEKVGVWS-----PADGLNIT---EVAKGRGPNVTDSLTNRS 435
            G R   +  I++L+   L +VG+++     P D   I    E  K RG  ++  L    
Sbjct: 343 DGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK--- 399

Query: 436 LIVTTVLEEPFVMFR--------KSDRTLYG-----------NDRFEG------------ 464
             + T+ +EPFV  +        K + T+ G           ND   G            
Sbjct: 400 --IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYG 457

Query: 465 YCIDLLKELAHILGFSYEIRLVEDGKYGAQD-----DKGQWNGMVKELIDHKADLAVAPL 519
           +CIDLL +LA  + F+YE+ LV DGK+G Q+     +K +WNGM+ EL+  +AD+ VAPL
Sbjct: 458 FCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPL 517

Query: 520 TITHVREKAIDFSKPFMTLGVSILYRK--PNGTNPSVFSFLNPLSPDIWMYVLLAYLGVS 577
           TI + R + I+FSKPF   G++IL +K  P  T   + SF+ P    +W+ V L+   V+
Sbjct: 518 TINNERAQYIEFSKPFKYQGLTILVKKEIPRST---LDSFMQPFQSTLWLLVGLSVHVVA 574

Query: 578 CVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG-SELMPKALSTR 636
            +L+++ RFSP+  +  +      E  E+  TL ++ WF  G L+  G  E  P++ S R
Sbjct: 575 VMLYLLDRFSPFGRFKVN----SEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 630

Query: 637 IIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT---KIEYGAVKDGATM 693
           I+G +W  F +II++SYTANLAAFL ++R E  I   +D   +    K  Y  VK  +  
Sbjct: 631 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVD 690

Query: 694 TFFKKS-KISTFEKMWAFMSSKPSALVKNNEEGIQRALTAD-----YALLMESTTIEYVT 747
            +F++  ++ST   M+  M        K+N E    A+ A      +A + +S  +E+  
Sbjct: 691 IYFRRQVELST---MYRHME-------KHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEA 740

Query: 748 QRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIMKEKWWRGSGCPE 807
            + C+L   G L    G+GIG    SP++  ++++IL+  E   +  + + W R   C  
Sbjct: 741 SQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS 800

Query: 808 EENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAEREQ 855
             N  A+ L  + + G+F+++A G+V  + +   E  YK  K A R+Q
Sbjct: 801 RSNAPAT-LTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQ 847


>gi|11038635 NMDA receptor 1 isoform NR1-2 precursor [Homo sapiens]
          Length = 901

 Score =  244 bits (622), Expect = 3e-64
 Identities = 211/768 (27%), Positives = 356/768 (46%), Gaps = 118/768 (15%)

Query: 149 YVNLYPDYASLSHAILDLVQYLKWRSATV-VYDDSTGLIRLQEL-IMAPSRYNIRLKIRQ 206
           ++   P Y+  S    ++++   W    + V DD  G    + L  +   R +   K+ Q
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQ 196

Query: 207 LPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYA 266
               + +   LL E K      II   S   AA + + A  + M    Y ++    ++  
Sbjct: 197 FDPGTKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISG 256

Query: 267 LDLEPYRYSGVNLTGFRILNVDNP--HVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAA 324
             L   RY+   + G +++N  N   H+S        + +    ++   LL+   +TD  
Sbjct: 257 NAL---RYAPDGILGLQLINGKNESAHIS--------DAVGVVAQAVHELLEKENITDP- 304

Query: 325 LLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW-EGLTGRIVFNKT 383
                           P+  V +        W+ G  F   +  +++ +G+TGR+ FN+ 
Sbjct: 305 ----------------PRGCVGNTNI-----WKTGPLFKRVLMSSKYADGVTGRVEFNE- 342

Query: 384 SGLRTDFDLDIISLKEDGLEKVGVWS-----PADGLNIT---EVAKGRGPNVTDSLTNRS 435
            G R   +  I++L+   L +VG+++     P D   I    E  K RG  ++  L    
Sbjct: 343 DGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK--- 399

Query: 436 LIVTTVLEEPFVMFR--------KSDRTLYG-----------NDRFEG------------ 464
             + T+ +EPFV  +        K + T+ G           ND   G            
Sbjct: 400 --IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYG 457

Query: 465 YCIDLLKELAHILGFSYEIRLVEDGKYGAQD-----DKGQWNGMVKELIDHKADLAVAPL 519
           +CIDLL +LA  + F+YE+ LV DGK+G Q+     +K +WNGM+ EL+  +AD+ VAPL
Sbjct: 458 FCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPL 517

Query: 520 TITHVREKAIDFSKPFMTLGVSILYRK--PNGTNPSVFSFLNPLSPDIWMYVLLAYLGVS 577
           TI + R + I+FSKPF   G++IL +K  P  T   + SF+ P    +W+ V L+   V+
Sbjct: 518 TINNERAQYIEFSKPFKYQGLTILVKKEIPRST---LDSFMQPFQSTLWLLVGLSVHVVA 574

Query: 578 CVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG-SELMPKALSTR 636
            +L+++ RFSP+  +  +      E  E+  TL ++ WF  G L+  G  E  P++ S R
Sbjct: 575 VMLYLLDRFSPFGRFKVN----SEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 630

Query: 637 IIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT---KIEYGAVKDGATM 693
           I+G +W  F +II++SYTANLAAFL ++R E  I   +D   +    K  Y  VK  +  
Sbjct: 631 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVD 690

Query: 694 TFFKKS-KISTFEKMWAFMSSKPSALVKNNEEGIQRALTAD-----YALLMESTTIEYVT 747
            +F++  ++ST   M+  M        K+N E    A+ A      +A + +S  +E+  
Sbjct: 691 IYFRRQVELST---MYRHME-------KHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEA 740

Query: 748 QRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIMKEKWWRGSGCPE 807
            + C+L   G L    G+GIG    SP++  ++++IL+  E   +  + + W R   C  
Sbjct: 741 SQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS 800

Query: 808 EENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAEREQ 855
             N  A+ L  + + G+F+++A G+V  + +   E  YK  K A R+Q
Sbjct: 801 RSNAPAT-LTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQ 847


>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor
           [Homo sapiens]
          Length = 1336

 Score =  185 bits (469), Expect = 2e-46
 Identities = 125/400 (31%), Positives = 211/400 (52%), Gaps = 38/400 (9%)

Query: 463 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTIT 522
           +G+CID+LK LAH +GFSY++ LV +GK+G + D G WNGM+ E+   +AD+A+  LTI 
Sbjct: 485 KGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKID-GVWNGMIGEVFYQRADMAIGSLTIN 543

Query: 523 HVREKAIDFSKPFMTLGVSILYRKPNGT-NPSVFSFLNPLSPDIWMYVLLAYLGVSCV-L 580
             R + +DFS PF+  G+S++  + NGT +PS  +FL P SP +W+ + +  L V  V +
Sbjct: 544 EERSEIVDFSVPFVETGISVMVARSNGTVSPS--AFLEPYSPAVWVMMFVMCLTVVAVTV 601

Query: 581 FVIARFSP--YEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSEL-MPKALSTRI 637
           F+    SP  Y    A    PG     + FT+  S W     +      +  P+  +++I
Sbjct: 602 FIFEYLSPVGYNRSLATGKRPGG----STFTIGKSIWLLWALVFNNSVPVENPRGTTSKI 657

Query: 638 IGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ------TKIEYGAVKDGA 691
           +  +W FF +I ++SYTANLAAF+  E     +    D   Q        +++G V +G+
Sbjct: 658 MVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGS 717

Query: 692 TMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTADY-----ALLMESTTIEYV 746
           T    +K+  S +  M ++M       V+ N+  ++ ALT        A + ++  + Y+
Sbjct: 718 T----EKNIRSNYPDMHSYM-------VRYNQPRVEEALTQLKAGKLDAFIYDAAVLNYM 766

Query: 747 TQRN--CNLTQIGG--LIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIMKEKWWRG 802
            +++  C L  IG   +  + GYGI    GS ++  I +A+LQ   +D++ +++  W  G
Sbjct: 767 ARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLSG 826

Query: 803 SGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGE 842
               ++    +S L I  + G+F +L   + LS+LV   E
Sbjct: 827 ICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWE 866


>gi|197313638 N-methyl-D-aspartate receptor subunit 2A isoform 2
           precursor [Homo sapiens]
          Length = 1281

 Score =  183 bits (464), Expect = 7e-46
 Identities = 175/678 (25%), Positives = 307/678 (45%), Gaps = 98/678 (14%)

Query: 220 EMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRY-SGVN 278
           ++K+     I+  CS   A  IL +A ++G+    + +I  +L     +L P  + SG+ 
Sbjct: 218 QLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGL- 276

Query: 279 LTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAALLYDAVHIVSVCY- 337
                        +S   + W    L+A  R   G+L     +            + CY 
Sbjct: 277 -------------ISVSYDDWDYS-LEARVRDGIGILTTAASSMLEKFSYIPEAKASCYG 322

Query: 338 -QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIIS 396
               P++ +++L                F+    W+G    + F +  G +    L +I 
Sbjct: 323 QMERPEVPMHTLH--------------PFMVNVTWDGKD--LSFTE-EGYQVHPRLVVIV 365

Query: 397 LKEDG-LEKVGVWSPADGLNITEVAKGRGPNVTD-SLTNRSLIVTTVLEEPFVMFRKSD- 453
           L +D   EKVG W     L++      R  + +D    +  L + T+ E PFV+    D 
Sbjct: 366 LNKDREWEKVGKWENHT-LSLRHAVWPRYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDP 424

Query: 454 ------RTLYGNDRF-----------------EGYCIDLLKELAHILGFSYEIRLVEDGK 490
                 R      +F                 +G+CID+LK+L+  + F+Y++ LV +GK
Sbjct: 425 LTETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGK 484

Query: 491 YGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGT 550
           +G + +   WNGM+ E++  +A +AV  LTI   R + +DFS PF+  G+S++  + NGT
Sbjct: 485 HGKKVNN-VWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT 543

Query: 551 -NPSVFSFLNPLSPDIWMYVLLAYLGVSCV-LFVIARFSPYEWYDAHPCNPGSEVVENNF 608
            +PS  +FL P S  +W+ + +  L VS + +FV   FSP  +        G      +F
Sbjct: 544 VSPS--AFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGY--NRNLAKGKAPHGPSF 599

Query: 609 TLLNSFWFGMGSLMQQGSELM-PKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERME 667
           T+  + W   G +      +  PK  +++I+  +W FF +I ++SYTANLAAF+  E   
Sbjct: 600 TIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFV 659

Query: 668 SPIDSADDLAKQTKIEY------GAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKN 721
             +    D   Q   +Y      G V +G+T    +++  + +  M  +M+       K 
Sbjct: 660 DQVTGLSDKKFQRPHDYSPPFRFGTVPNGST----ERNIRNNYPYMHQYMT-------KF 708

Query: 722 NEEGIQRALTADY-----ALLMESTTIEYVTQRN--CNLTQIGG--LIDSKGYGIGTPMG 772
           N++G++ AL +       A + ++  + Y   R+  C L  IG   +  + GYGI    G
Sbjct: 709 NQKGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKG 768

Query: 773 SPYRDKITIAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGL 832
           SP++ +I +A+LQ   + ++  ++  W  G    E+    +S L I  + G+F +LAA +
Sbjct: 769 SPWKRQIDLALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAM 828

Query: 833 VLSVLVAVGE--FVYKLR 848
            LS++  + E  F +KLR
Sbjct: 829 ALSLITFIWEHLFYWKLR 846


>gi|197313636 N-methyl-D-aspartate receptor subunit 2A isoform 1
           precursor [Homo sapiens]
          Length = 1464

 Score =  183 bits (464), Expect = 7e-46
 Identities = 175/678 (25%), Positives = 307/678 (45%), Gaps = 98/678 (14%)

Query: 220 EMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRY-SGVN 278
           ++K+     I+  CS   A  IL +A ++G+    + +I  +L     +L P  + SG+ 
Sbjct: 218 QLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGL- 276

Query: 279 LTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAALLYDAVHIVSVCY- 337
                        +S   + W    L+A  R   G+L     +            + CY 
Sbjct: 277 -------------ISVSYDDWDYS-LEARVRDGIGILTTAASSMLEKFSYIPEAKASCYG 322

Query: 338 -QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIIS 396
               P++ +++L                F+    W+G    + F +  G +    L +I 
Sbjct: 323 QMERPEVPMHTLH--------------PFMVNVTWDGKD--LSFTE-EGYQVHPRLVVIV 365

Query: 397 LKEDG-LEKVGVWSPADGLNITEVAKGRGPNVTD-SLTNRSLIVTTVLEEPFVMFRKSD- 453
           L +D   EKVG W     L++      R  + +D    +  L + T+ E PFV+    D 
Sbjct: 366 LNKDREWEKVGKWENHT-LSLRHAVWPRYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDP 424

Query: 454 ------RTLYGNDRF-----------------EGYCIDLLKELAHILGFSYEIRLVEDGK 490
                 R      +F                 +G+CID+LK+L+  + F+Y++ LV +GK
Sbjct: 425 LTETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGK 484

Query: 491 YGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGT 550
           +G + +   WNGM+ E++  +A +AV  LTI   R + +DFS PF+  G+S++  + NGT
Sbjct: 485 HGKKVNN-VWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT 543

Query: 551 -NPSVFSFLNPLSPDIWMYVLLAYLGVSCV-LFVIARFSPYEWYDAHPCNPGSEVVENNF 608
            +PS  +FL P S  +W+ + +  L VS + +FV   FSP  +        G      +F
Sbjct: 544 VSPS--AFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGY--NRNLAKGKAPHGPSF 599

Query: 609 TLLNSFWFGMGSLMQQGSELM-PKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERME 667
           T+  + W   G +      +  PK  +++I+  +W FF +I ++SYTANLAAF+  E   
Sbjct: 600 TIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFV 659

Query: 668 SPIDSADDLAKQTKIEY------GAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKN 721
             +    D   Q   +Y      G V +G+T    +++  + +  M  +M+       K 
Sbjct: 660 DQVTGLSDKKFQRPHDYSPPFRFGTVPNGST----ERNIRNNYPYMHQYMT-------KF 708

Query: 722 NEEGIQRALTADY-----ALLMESTTIEYVTQRN--CNLTQIGG--LIDSKGYGIGTPMG 772
           N++G++ AL +       A + ++  + Y   R+  C L  IG   +  + GYGI    G
Sbjct: 709 NQKGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKG 768

Query: 773 SPYRDKITIAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGL 832
           SP++ +I +A+LQ   + ++  ++  W  G    E+    +S L I  + G+F +LAA +
Sbjct: 769 SPWKRQIDLALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAM 828

Query: 833 VLSVLVAVGE--FVYKLR 848
            LS++  + E  F +KLR
Sbjct: 829 ALSLITFIWEHLFYWKLR 846


>gi|4504125 N-methyl-D-aspartate receptor subunit 2A isoform 1
           precursor [Homo sapiens]
          Length = 1464

 Score =  183 bits (464), Expect = 7e-46
 Identities = 175/678 (25%), Positives = 307/678 (45%), Gaps = 98/678 (14%)

Query: 220 EMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRY-SGVN 278
           ++K+     I+  CS   A  IL +A ++G+    + +I  +L     +L P  + SG+ 
Sbjct: 218 QLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGL- 276

Query: 279 LTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAALLYDAVHIVSVCY- 337
                        +S   + W    L+A  R   G+L     +            + CY 
Sbjct: 277 -------------ISVSYDDWDYS-LEARVRDGIGILTTAASSMLEKFSYIPEAKASCYG 322

Query: 338 -QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIIS 396
               P++ +++L                F+    W+G    + F +  G +    L +I 
Sbjct: 323 QMERPEVPMHTLH--------------PFMVNVTWDGKD--LSFTE-EGYQVHPRLVVIV 365

Query: 397 LKEDG-LEKVGVWSPADGLNITEVAKGRGPNVTD-SLTNRSLIVTTVLEEPFVMFRKSD- 453
           L +D   EKVG W     L++      R  + +D    +  L + T+ E PFV+    D 
Sbjct: 366 LNKDREWEKVGKWENHT-LSLRHAVWPRYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDP 424

Query: 454 ------RTLYGNDRF-----------------EGYCIDLLKELAHILGFSYEIRLVEDGK 490
                 R      +F                 +G+CID+LK+L+  + F+Y++ LV +GK
Sbjct: 425 LTETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGK 484

Query: 491 YGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGT 550
           +G + +   WNGM+ E++  +A +AV  LTI   R + +DFS PF+  G+S++  + NGT
Sbjct: 485 HGKKVNN-VWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT 543

Query: 551 -NPSVFSFLNPLSPDIWMYVLLAYLGVSCV-LFVIARFSPYEWYDAHPCNPGSEVVENNF 608
            +PS  +FL P S  +W+ + +  L VS + +FV   FSP  +        G      +F
Sbjct: 544 VSPS--AFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGY--NRNLAKGKAPHGPSF 599

Query: 609 TLLNSFWFGMGSLMQQGSELM-PKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERME 667
           T+  + W   G +      +  PK  +++I+  +W FF +I ++SYTANLAAF+  E   
Sbjct: 600 TIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFV 659

Query: 668 SPIDSADDLAKQTKIEY------GAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKN 721
             +    D   Q   +Y      G V +G+T    +++  + +  M  +M+       K 
Sbjct: 660 DQVTGLSDKKFQRPHDYSPPFRFGTVPNGST----ERNIRNNYPYMHQYMT-------KF 708

Query: 722 NEEGIQRALTADY-----ALLMESTTIEYVTQRN--CNLTQIGG--LIDSKGYGIGTPMG 772
           N++G++ AL +       A + ++  + Y   R+  C L  IG   +  + GYGI    G
Sbjct: 709 NQKGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKG 768

Query: 773 SPYRDKITIAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGL 832
           SP++ +I +A+LQ   + ++  ++  W  G    E+    +S L I  + G+F +LAA +
Sbjct: 769 SPWKRQIDLALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAM 828

Query: 833 VLSVLVAVGE--FVYKLR 848
            LS++  + E  F +KLR
Sbjct: 829 ALSLITFIWEHLFYWKLR 846


>gi|167003331 N-methyl-D-aspartate receptor subunit 2B precursor
           [Homo sapiens]
          Length = 1484

 Score =  181 bits (460), Expect = 2e-45
 Identities = 143/497 (28%), Positives = 240/497 (48%), Gaps = 64/497 (12%)

Query: 394 IISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSD 453
           I+  KE   E+VG W     L +      R    T+   +  L + T+ E PFV+    D
Sbjct: 365 ILLNKERKWERVGKWKDKS-LQMKYYVWPRMCPETEEQEDDHLSIVTLEEAPFVIVESVD 423

Query: 454 ---------------RTLYGNDRFE----------GYCIDLLKELAHILGFSYEIRLVED 488
                          R +  N   E          G+CID+LK+++  + F+Y++ LV +
Sbjct: 424 PLSGTCMRNTVPCQKRIVTENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTN 483

Query: 489 GKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPN 548
           GK+G + + G WNGM+ E++  +A +AV  LTI   R + +DFS PF+  G+S++  + N
Sbjct: 484 GKHGKKIN-GTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSN 542

Query: 549 GT-NPSVFSFLNPLSPDIWMYVLLAYLGVSCV-LFVIARFSP--YEWYDAHPCNPGSEVV 604
           GT +PS  +FL P S D+W+ + +  L VS V +FV   FSP  Y    A    PG    
Sbjct: 543 GTVSPS--AFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGP-- 598

Query: 605 ENNFTLLNSFWFGMGSLMQQGSELM-PKALSTRIIGGIWWFFTLIIISSYTANLAAFLTV 663
             +FT+  + W   G +      +  PK  +++I+  +W FF +I ++SYTANLAAF+  
Sbjct: 599 --SFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQ 656

Query: 664 ERMESPIDSADDLAKQ------TKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSA 717
           E     +    D   Q          +G V +G+T    +++  + + +M A+M      
Sbjct: 657 EEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGST----ERNIRNNYAEMHAYMG----- 707

Query: 718 LVKNNEEGIQRALTADY-----ALLMESTTIEYVTQRN--CNLTQIGG--LIDSKGYGIG 768
             K N+ G+  AL +       A + ++  + Y+  R+  C L  IG   +  S GYGI 
Sbjct: 708 --KFNQRGVDDALLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIA 765

Query: 769 TPMGSPYRDKITIAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVL 828
               S ++ ++ +AILQL  + ++  ++  W  G    E+    +S L I  + G+F +L
Sbjct: 766 IQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYML 825

Query: 829 AAGLVLSVLVAVGEFVY 845
            A + LS++  + E ++
Sbjct: 826 GAAMALSLITFICEHLF 842


>gi|55770854 N-methyl-D-aspartate receptor subunit 2C precursor
           [Homo sapiens]
          Length = 1233

 Score =  172 bits (435), Expect = 2e-42
 Identities = 156/576 (27%), Positives = 261/576 (45%), Gaps = 71/576 (12%)

Query: 362 FMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGL-EKVGVWSPADGLNITEVA 420
           F   +    WEG   R       G      + +I+L    L E VG W          V 
Sbjct: 331 FYRHLLNVTWEG---RDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVW 387

Query: 421 KGRGPNVTDSLTNRSLIVTTVLEEPFVMF------------------RKSDRTLYGNDRF 462
                ++   + +R L V T+ E PFV+                   R+S+ T    D  
Sbjct: 388 PRYSASLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVA 447

Query: 463 -------EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLA 515
                  +G+CID+LK+LA ++ FSY++ LV +GK+G +  +G WNGM+ E+   +AD+A
Sbjct: 448 PYTKLCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKRV-RGVWNGMIGEVYYKRADMA 506

Query: 516 VAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGT-NPSVFSFLNPLSPDIWMYVLLAYL 574
           +  LTI   R + +DFS PF+  G+S++  + NGT +PS  +FL P SP +W+ + +  L
Sbjct: 507 IGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPS--AFLEPYSPAVWVMMFVMCL 564

Query: 575 GVSCV-LFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSEL-MPKA 632
            V  + +F+   FSP  +        G +     FT+  S W     +      +  P+ 
Sbjct: 565 TVVAITVFMFEYFSPVSY--NQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRG 622

Query: 633 LSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ------TKIEYGA 686
            +++I+  +W FF +I ++SYTANLAAF+  E+    +    D   Q          +G 
Sbjct: 623 TTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGT 682

Query: 687 VKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTADY-----ALLMEST 741
           V +G+T    +++  S +  M   M       VK N+  ++ ALT+       A + ++ 
Sbjct: 683 VPNGST----ERNIRSNYRDMHTHM-------VKFNQRSVEDALTSLKMGKLDAFIYDAA 731

Query: 742 TIEYVTQRN--CNLTQIGG--LIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIMKE 797
            + Y+  ++  C L  IG   +  + GYGI     S ++  I +A+LQ   + +   ++ 
Sbjct: 732 VLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLET 791

Query: 798 KWWRGSGCPEEENK-EASALGIQKIGGIFIVLAAGLVLSVLVAVGEFV--YKLRKTA-ER 853
            W  G  C  E+N+  +S L I  + G+F +L   + L++LV   E +  +KLR +    
Sbjct: 792 VWLSGI-CQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLRHSVPNS 850

Query: 854 EQRSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTD 889
            Q  F    +   R   +C   V+    PP     D
Sbjct: 851 SQLDFLLAFS---RGIYSCFSGVQSLASPPRQASPD 883


>gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
           [Homo sapiens]
          Length = 1043

 Score =  154 bits (389), Expect = 4e-37
 Identities = 139/536 (25%), Positives = 225/536 (41%), Gaps = 65/536 (12%)

Query: 360 GRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKED-----GLEKVGVWSPADG 413
           GRF+  F+    ++G TG +    +S +       + SL+ D         VG W   DG
Sbjct: 335 GRFLARFLANTSFQGRTGPVWVTGSSQVHMSRHFKVWSLRRDPRGAPAWATVGSWR--DG 392

Query: 414 LNITEV--AKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLY-----------GND 460
               E   A  R P    +     L V T+LE PFV  R  D                ND
Sbjct: 393 QLDLEPGGASARPPPPQGAQVWPKLRVVTLLEHPFVFARDPDEDGQCPAGQLCLDPGTND 452

Query: 461 RFE----------------------GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKG 498
                                    GYCIDLL+ LA    F +E+ LV DGKYGA  D G
Sbjct: 453 SATLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLVGDGKYGALRD-G 511

Query: 499 QWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFL 558
           +W G+V +L+  +A +AV   +I   R + +DF+ PF +  + I+ R  +  +P + +F+
Sbjct: 512 RWTGLVGDLLAGRAHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRARDTASP-IGAFM 570

Query: 559 NPLSPDIWMYVLLAYLGVSCVLFVIARF-SPYEWYDAHPCNPGSEVVENNFTLLNSFWFG 617
            PL    W       LGV   L + A F + YEW   +   P        F+  ++    
Sbjct: 571 WPLHWSTW-------LGVFAALHLTALFLTVYEWRSPYGLTPRGRNRSTVFSYSSALNLC 623

Query: 618 MGSLMQQG-SELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
              L ++  S   PK  + R++  +W  F L+++SSYTANLAA +  ++    +    D 
Sbjct: 624 YAILFRRTVSSKTPKCPTGRLLMNLWAIFCLLVLSSYTANLAAVMVGDKTFEELSGIHDP 683

Query: 677 AKQTKIE---YGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTAD 733
                 +   +G V + +   + KKS    F  M A M    +         +       
Sbjct: 684 KLHHPAQGFRFGTVWESSAEAYIKKS----FPDMHAHMRRHSAPTTPRGVAMLTSDPPKL 739

Query: 734 YALLMESTTIEYVT--QRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
            A +M+ + ++Y      +C L  +G     +GYGIG P  SP    ++  I + +    
Sbjct: 740 NAFIMDKSLLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNLSEFISRYKSSGF 799

Query: 792 LHIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVY 845
           + ++ +KW++   C +      E   + I    G+F++L  GL  ++L ++GE  +
Sbjct: 800 IDLLHDKWYKMVPCGKRVFAVTETLQMSIYHFAGLFVLLCLGLGSALLSSLGEHAF 855


>gi|223278356 glutamate receptor, ionotropic, N-methyl-D-aspartate
           3A [Homo sapiens]
          Length = 1115

 Score =  153 bits (387), Expect = 6e-37
 Identities = 111/394 (28%), Positives = 190/394 (48%), Gaps = 23/394 (5%)

Query: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITH 523
           GYCIDLL+++A  + F +++ +V DGKYGA  + G W G+V +L+   A +AV   +I  
Sbjct: 578 GYCIDLLEKIAEDMNFDFDLYIVGDGKYGAWKN-GHWTGLVGDLLRGTAHMAVTSFSINT 636

Query: 524 VREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVI 583
            R + IDF+ PF +  + IL R  +   P + +F+ PL   +W+ + +A L ++ V   +
Sbjct: 637 ARSQVIDFTSPFFSTSLGILVRTRDTAAP-IGAFMWPLHWTMWLGIFVA-LHITAVFLTL 694

Query: 584 ARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELM-PKALSTRIIGGIW 642
                YEW       P        F+  ++       L  +   +  PK  + R +  +W
Sbjct: 695 -----YEWKSPFGLTPKGRNRSKVFSFSSALNICYALLFGRTVAIKPPKCWTGRFLMNLW 749

Query: 643 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLA---KQTKIEYGAVKDGATMTFFKKS 699
             F +  +S+YTANLAA +  E++   +    D           +G V++ +   + ++S
Sbjct: 750 AIFCMFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQS 809

Query: 700 KISTFEKMWAF-MSSKPSAL--VKNNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQI 756
                E M  + + + P  +  +KN+ E +  A   D ALL    +I+     +C L  +
Sbjct: 810 FPEMHEYMRRYNVPATPDGVEYLKNDPEKLD-AFIMDKALLDYEVSID----ADCKLLTV 864

Query: 757 GGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIMKEKWWRGSGCPEEE--NKEAS 814
           G     +GYGIG P  SP    I+  I Q +    + ++ +KW+R   C +      E  
Sbjct: 865 GKPFAIEGYGIGLPPNSPLTANISELISQYKSHGFMDMLHDKWYRVVPCGKRSFAVTETL 924

Query: 815 ALGIQKIGGIFIVLAAGLVLSVLVAVGE-FVYKL 847
            +GI+   G+F++L  G  LS+L  +GE  VY+L
Sbjct: 925 QMGIKHFSGLFVLLCIGFGLSILTTIGEHIVYRL 958


>gi|116284390 glutamate receptor, ionotrophic, AMPA 4 isoform 3
           precursor [Homo sapiens]
          Length = 433

 Score =  151 bits (381), Expect = 3e-36
 Identities = 117/438 (26%), Positives = 201/438 (45%), Gaps = 38/438 (8%)

Query: 19  LLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTT 78
           LL   FW       P  ++IGG+F         + N ++    F   I   N +  PN +
Sbjct: 10  LLFSGFWGLAMGAFPSSVQIGGLF---------IRNTDQEYTAFRLAIFLHNTS--PNAS 58

Query: 79  -----LTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHI 133
                L   +  I   +SF  T   C Q + GV AIFG       + + S C+AL   HI
Sbjct: 59  EAPFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRSVHTLTSFCSAL---HI 115

Query: 134 QLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIM 193
            L     P + +  F + L P   SL  A+L L+ + +W     +YD   G   LQ ++ 
Sbjct: 116 SLITPSFPTEGESQFVLQLRP---SLRGALLSLLDHYEWNCFVFLYDTDRGYSILQAIME 172

Query: 194 APSRYNIRLKIRQLPIDSDDS-RPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMT 252
              +    +    +   +D S R LL+E+ R +E + + DC       IL+Q +++G   
Sbjct: 173 KAGQNGWHVSAICVENFNDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHV 232

Query: 253 EYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSES 312
           + YH+I   L    + LE + + G N+TGF++++ + P V  ++++W     +  P SE+
Sbjct: 233 KGYHYIIANLGFKDISLERFIHGGANVTGFQLVDFNTPMVIKLMDRWKKLDQREYPGSET 292

Query: 313 GLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTV------NSLQCHRHKA--WRFGGRFMN 364
                     +AL YD V +++  ++   +  +      N+  C  + A  W  G     
Sbjct: 293 -----PPKYTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMER 347

Query: 365 FIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRG 424
            +K+ + +GLTG + F+   G R ++ +D+  LK  G  KVG W+  D L + +     G
Sbjct: 348 TLKQVRIQGLTGNVQFDH-YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLG 406

Query: 425 PNVTDSLTNRSLIVTTVL 442
            N T ++ NR+++VTT++
Sbjct: 407 -NDTAAIENRTVVVTTIM 423


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,493,177
Number of Sequences: 37866
Number of extensions: 1437020
Number of successful extensions: 2878
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2638
Number of HSP's gapped (non-prelim): 49
length of query: 919
length of database: 18,247,518
effective HSP length: 111
effective length of query: 808
effective length of database: 14,044,392
effective search space: 11347868736
effective search space used: 11347868736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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